# terms

id: MONDO:0012258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by belt-like areas of erythema with multiple vesicles and small blisters at the advancing edge of erythema.","definition_xrefs":["Orphanet:158681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2E, with migratory circinate erythema","secondary_identifiers":["GARD:16990","UMLS:C1836284","MEDGEN:324475","SCTID:716700003","MESH:C563730","OMIM:609352"],"synonyms":[{"name":"EBS-migr","type":"exact"},{"name":"epidermolysis bullosa simplex 2E, with migratory circinate erythema","type":"exact"},{"name":"epidermolysis bullosa simplex with migratory circinate erythema","type":"exact"}],"termid":"MONDO:0012258","xrefs":{"Monarch":{"xref_id":"0012258"}}}


id: PBO:0054109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1474","termid":"PBO:0054109"}


id: GO:0048339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm development","termid":"GO:0007498"},{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesoderm development","termid":"GO:0048339"}


id: MONDO:1012184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"navicular disease, non-human animal","termid":"MONDO:1011948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"navicular disease, horse","secondary_identifiers":["OMIA:000704-9796"],"termid":"MONDO:1012184","xrefs":{"Monarch":{"xref_id":"1012184"}}}


id: PBO:0001473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein DNAJB family (predicted)","termid":"PBO:0001473"}


id: PATO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000432 parental type value (obsolete PATO:0000432)","termid":"PATO:0000432"}


id: PBO:0075856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 4B","termid":"PBO:0075856"}


id: PBO:0048254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-3-O-sulfotransferase 2","termid":"PBO:0048254"}


id: PBO:0056888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake family member 3","termid":"PBO:0056888"}


id: MONDO:0036212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraparesis-cataracts-speech delay syndrome","secondary_identifiers":["OMIM:619338","GARD:18033","Orphanet:615938"],"synonyms":[{"name":"Fatty acyl-CoA reductase 1 superactivity","type":"exact"}],"termid":"MONDO:0036212","xrefs":{"Monarch":{"xref_id":"0036212"}}}


id: GO:1990356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of a SUMO (small ubiquitin-related modifier) protein bound to a SUMO-conjugating E2 ligase. Sumoylation of the E2 ligase is an intermediate step required for the formation of covalent bonds between a SUMO protein and its ultimate protein target. SUMO is transferred to the E2 ligase by a SUMO-activating E1 enzyme. Sumoylation of the target protein is either facilitated directly by the sumoylated E2 ligase or aided by an optional E3 ligase.","definition_xrefs":["PMID:18691969","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete sumoylated E2 ligase complex (obsolete GO:1990356)","termid":"GO:1990356"}


id: GO:0047787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-5beta-steroid + NADP+ = a 3-oxo-Delta(4)-steroid + H+ + NADPH. The enzyme from human efficiently catalyzes the reduction of progesterone, androstenedione, 17alpha-hydroxyprogesterone and testosterone to 5beta-reduced metabolites; it can also act on aldosterone, corticosterone and cortisol, but to a lesser extent. The bile acid intermediates 7alpha,12alpha-dihydroxy-4-cholesten-3- one and 7alpha-hydroxy-4-cholesten-3-one can also act as substrates.","definition_xrefs":["EC:1.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enone reductase activity","termid":"GO:0035671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"Delta4-3-oxosteroid 5beta-reductase activity","secondary_identifiers":["MetaCyc:RXN-23672","GO:0047752","RHEA:54412"],"synonyms":[{"name":"3-oxo-5beta-steroid:NADP+ delta4-oxidoreductase activity","type":"exact"},{"name":"3-oxo-Delta(4)-steroid 5-beta-reductase activity","type":"exact"},{"name":"3-oxo-Delta4-steroid 5beta-reductase activity","type":"exact"},{"name":"4,5beta-dihydrocortisone:NADP+ delta4-oxidoreductase activity","type":"narrow"},{"name":"5-beta-reductase activity","type":"broad"},{"name":"5beta-cholestan-3-one:NADP+ 4,5-oxidoreductase activity","type":"narrow"},{"name":"5beta-reductase activity","type":"related"},{"name":"Delta(4)-3-ketosteroid 5-beta-reductase activity","type":"related"},{"name":"Delta(4)-5-beta-reductase activity","type":"related"},{"name":"Delta(4)-hydrogenase activity","type":"related"},{"name":"Delta4-3-ketosteroid 5beta-reductase activity","type":"related"},{"name":"Delta4-3-oxosteroid 5-beta-reductase activity","type":"exact"},{"name":"Delta4-5beta-reductase activity","type":"related"},{"name":"Delta4-hydrogenase activity","type":"related"},{"name":"androstenedione 5-beta-reductase activity","type":"narrow"},{"name":"androstenedione 5beta-reductase activity","type":"narrow"},{"name":"cholestenone 5-beta-reductase activity","type":"narrow"},{"name":"cholestenone 5b-reductase activity","type":"narrow"},{"name":"cholestenone 5beta-reductase activity","type":"narrow"},{"name":"cortisone 5-beta-reductase activity","type":"narrow"},{"name":"cortisone 5beta-reductase activity","type":"narrow"},{"name":"cortisone b-reductase activity","type":"narrow"},{"name":"cortisone beta-reductase activity","type":"narrow"},{"name":"cortisone delta(4)-5-beta-reductase activity","type":"narrow"},{"name":"cortisone delta4-5beta-reductase activity","type":"related"},{"name":"steroid 5-beta-reductase activity","type":"related"},{"name":"steroid 5beta-reductase activity","type":"related"},{"name":"testosterone 5-beta-reductase activity","type":"narrow"},{"name":"testosterone 5beta-reductase activity","type":"narrow"}],"termid":"GO:0047787"}


id: PBO:0039255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 4 family member A1","termid":"PBO:0039255"}


id: PBO:0068659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 40, pseudogene","termid":"PBO:0068659"}


id: GO:0062237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the postsynapse, the part of a synapse that is part of the post-synaptic cell.","definition_xrefs":["PMID:31189538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to postsynapse","termid":"GO:0062237"}


id: MONDO:0004545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant peripheral nerve sheath tumor occurring during adulthood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant peripheral nerve sheath tumor","termid":"MONDO:0017827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult malignant schwannoma","secondary_identifiers":["MEDGEN:75845","NCIT:C7814","UMLS:C0278622","DOID:8369"],"synonyms":[{"name":"adult MPNST","type":"exact"},{"name":"adult malignant neoplasm of peripheral nerve sheath","type":"exact"},{"name":"adult malignant neoplasm of the peripheral nerve sheath","type":"exact"},{"name":"adult malignant neurilemmoma","type":"exact"},{"name":"adult malignant peripheral nerve sheath neoplasm","type":"exact"},{"name":"adult malignant peripheral nerve sheath tumor","type":"exact"},{"name":"adult malignant peripheral nerve sheath tumour","type":"exact"},{"name":"adult malignant schwannoma","type":"exact"},{"name":"adult malignant tumor of peripheral nerve sheath","type":"exact"},{"name":"adult malignant tumor of the peripheral nerve sheath","type":"exact"},{"name":"adult malignant tumour of peripheral nerve sheath","type":"exact"},{"name":"adult malignant tumour of the peripheral nerve sheath","type":"exact"},{"name":"malignant peripheral nerve sheath tumor","type":"broad"},{"name":"malignant peripheral nerve sheath tumour","type":"broad"}],"termid":"MONDO:0004545","xrefs":{"Monarch":{"xref_id":"0004545"}}}


id: MONDO:0020519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multifocal, unisystem form of Langerhans-cell histiocytosis. There is involvement of multiple sites in one organ system, most frequently the bone. Patients are usually young children presenting with multiple destructive bone lesions.","definition_xrefs":["NCIT:C6920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis","termid":"MONDO:0018310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hand-Schuller-Christian disease","secondary_identifiers":["SCTID:39795003","UMLS:C5574737","ICDO:9753/1","GARD:6567","MEDGEN:1804593","ICD9:277.89","Orphanet:99873"],"synonyms":[{"name":"chronic multifocal Langerhans cell histiocytosis","type":"exact"},{"name":"classic multifocal Langerhans cell histiocytosis","type":"exact"},{"name":"hand-SChüller-Christian disease","type":"exact"},{"name":"hand-Schuller-Christian disease","type":"exact"},{"name":"multifocal Unisystem Langerhans cell histiocytosis","type":"exact"},{"name":"multifocal eosinophilic granuloma","type":"exact"}],"termid":"MONDO:0020519","xrefs":{"Monarch":{"xref_id":"0020519"}}}


id: PBO:0017022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0017022"}


id: PR:O59771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UMP-CMP kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04532","PANTHER:PTHR23359:SF23","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.05c","secondary_identifiers":["UniProtKB:O59771"],"synonyms":[{"name":"ATP:UMP phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CMPK1","type":"exact"},{"name":"UK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dCMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"deoxycytidylate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uridine monophosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59771"}


id: GO:0075099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075099)","termid":"GO:0075099"}


id: GO:0014721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The twitch skeletal muscle responds to neurostimulations with a contraction followed by a relaxation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"twitch skeletal muscle contraction","termid":"GO:0014721"}


id: FYPO:0002805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which sodium ion import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal sodium import","synonyms":[{"name":"normal sodium import across plasma membrane","type":"exact"},{"name":"normal sodium import during mitotic cell cycle","type":"related"},{"name":"normal sodium import during vegetative growth","type":"exact"},{"name":"normal sodium import into cell","type":"exact"},{"name":"normal sodium ion import into cell","type":"exact"},{"name":"normal sodium uptake","type":"exact"}],"termid":"FYPO:0002805"}


id: PBO:0040088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase family member H","termid":"PBO:0040088"}


id: GO:0047427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-cyano-L-alanine + 2 H2O + H+ = L-aspartate + NH4.","definition_xrefs":["RHEA:11188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"cyanoalanine nitrilase activity","secondary_identifiers":["EC:3.5.5.4","KEGG_REACTION:R00486","MetaCyc:3.5.5.4-RXN"],"synonyms":[{"name":"3-cyano-L-alanine aminohydrolase activity","type":"related"},{"name":"beta-cyanoalanine nitrilase activity","type":"related"}],"termid":"GO:0047427"}


id: SO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the first two or last two bases of an intron, or the 5th base from the start of the intron in the orientation of the transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"},{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_site_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"VAT:spliceOverlap","type":"exact"},{"name":"essential_splice_site","type":"exact"},{"name":"splice site variant","type":"exact"}],"termid":"SO:0001629"}


id: MONDO:0100278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of plasmalogen biosynthesis in which the cause of the disease is a mutation in the AGXT gene.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process","PMID:16756494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glyoxylate metabolism","termid":"MONDO:0017703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"alanine glyoxylate aminotransferase deficiency","synonyms":[{"name":"AGXT defect","type":"exact"},{"name":"AGXT deficiency","type":"exact"},{"name":"alanine glyoxylate aminotransferase deficiency","type":"exact"}],"termid":"MONDO:0100278","xrefs":{"Monarch":{"xref_id":"0100278"}}}


id: PBO:0030001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_decreased_numbers_during_vegetative_growth","termid":"PBO:0030001"}


id: PBO:0034127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-aligned_with","termid":"PBO:0034127"}


id: GO:0030143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that mediates transport of cargo within the Golgi complex (for example, between cisternae of the Golgi stack).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"COPI-coated inter-Golgi transport vesicle","secondary_identifiers":["NIF_Subcellular:sao1382918459","GO:0005807"],"synonyms":[{"name":"inter-Golgi transport constitutive secretory pathway transport vesicle","type":"exact"}],"termid":"GO:0030143"}


id: PBO:0004496
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.33","termid":"PBO:0004496"}


id: GO:0000958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mRNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"},{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}


id: GO:0009018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + phosphate = D-fructose + alpha-D-glucose 1-phosphate.","definition_xrefs":["RHEA:24048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sucrose phosphorylase activity","secondary_identifiers":["EC:2.4.1.7","MetaCyc:SUCROSE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"disaccharide glucosyltransferase activity","type":"broad"},{"name":"sucrose glucosyltransferase activity","type":"related"},{"name":"sucrose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0009018"}


id: PBO:0059533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Glu (GAA/G)","termid":"PBO:0059533"}


id: PBO:0031635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gene_silencing","termid":"PBO:0031635"}


id: PBO:0080791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPA, DNA damage recognition and repair factor","termid":"PBO:0080791"}


id: PBO:0073350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 9 pseudogene 1","termid":"PBO:0073350"}


id: FYPO:0001140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of leucine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal leucine import","termid":"FYPO:0001139"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased leucine import","synonyms":[{"name":"decreased L-leucine import","type":"exact"},{"name":"decreased L-leucine import across plasma membrane","type":"exact"},{"name":"decreased leucine import during mitotic cell cycle","type":"related"},{"name":"decreased leucine import during vegetative growth","type":"exact"},{"name":"decreased leucine import into cell","type":"exact"},{"name":"decreased leucine uptake","type":"exact"},{"name":"reduced leucine import","type":"exact"}],"termid":"FYPO:0001140"}


id: GO:0043028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["Wikipedia:Caspase","GOC:jl","PMID:14744432","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","synonyms":[{"name":"caspase regulator activity","type":"broad"}],"termid":"GO:0043028"}


id: MONDO:1011895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guillain-Barr-like polyradiculoneuropathy, non-human animal","secondary_identifiers":["OMIA:002062"],"termid":"MONDO:1011895","xrefs":{"Monarch":{"xref_id":"1011895"}}}


id: PR:Q10269
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- are1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.05","synonyms":[{"name":"Spom972h-are1","type":"exact"},{"name":"sterol-ester synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10269"}


id: PBO:0051899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 7","termid":"PBO:0051899"}


id: PBO:0080359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 14 pseudogene","termid":"PBO:0080359"}


id: MONDO:0022174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cytogenetic abnormality that refers to the allelic loss of all or part of the short arm of chromosome 12.","definition_xrefs":["NCIT:C36410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 12","termid":"MONDO:0017277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12p deletion","secondary_identifiers":["GARD:21404","UMLS:C0795844","Orphanet:316244","MESH:C538302","MEDGEN:208640","MESH:C538301"],"synonyms":[{"name":"12p del","type":"related"},{"name":"12p deletion","type":"related"},{"name":"12p monosomy","type":"related"},{"name":"12p-","type":"related"},{"name":"del(12p)","type":"related"},{"name":"deletion 12p","type":"related"},{"name":"loss of chromosome 12p","type":"related"},{"name":"monosomy 12p","type":"related"},{"name":"partial deletion of chromosome 12p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 12","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 12","type":"exact"},{"name":"partial monosomy 12p","type":"related"},{"name":"partial monosomy of chromosome 12p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 12","type":"exact"}],"termid":"MONDO:0022174","xrefs":{"Monarch":{"xref_id":"0022174"}}}


id: GO:0005038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete death receptor interacting protein activity (obsolete GO:0005038)","synonyms":[{"name":"death receptor interacting protein activity","type":"exact"}],"termid":"GO:0005038"}


id: GO:0080078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a tricaffeoyl spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity","termid":"GO:0080078"}


id: GO:0033378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protease to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to T cell secretory granule","termid":"GO:0033376"},{"relation_name":"part_of","term_name":"protease localization to T cell secretory granule","termid":"GO:0033375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"establishment of protease localization to T cell secretory granule","synonyms":[{"name":"establishment of protease localisation in T cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of protease localization in T-cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033378"}


id: PBO:0072539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 69","termid":"PBO:0072539"}


id: MONDO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spondyloepimetaphyseal dysplasia with joint laxity (obsolete MONDO:0000186)","termid":"MONDO:0000186","xrefs":{"Monarch":{"xref_id":"0000186"}}}


id: MONDO:0010078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition caused by by truncating mutations in the C-propeptide of COL2A1. Like other type II collagen disorders it is characterized by short stature, platyspondyly and epiphyseal dysplasia. A distinguishing feature is the presence of brachydactyly with a prominent first toe.","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloperipheral dysplasia","secondary_identifiers":["GARD:4994","ICD9:758.89","Orphanet:1856","OMIM:271700","NCIT:C135088","SCTID:702339001","DOID:0112195","MESH:C535799","NANDO:2201351","UMLS:C0796173","MEDGEN:163223"],"synonyms":[{"name":"spondyloperipheral dysplasia","type":"exact"},{"name":"spondyloperipheral dysplasia with short ulna","type":"related"},{"name":"spondyloperipheral dysplasia-short ulna syndrome","type":"exact"}],"termid":"MONDO:0010078","xrefs":{"Monarch":{"xref_id":"0010078"}}}


id: MONDO:0008659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"transcobalamin I deficiency","secondary_identifiers":["MESH:C562798","UMLS:C0342700","MEDGEN:90993","OMIM:193090","GARD:4522","Orphanet:2967","SCTID:237933007"],"synonyms":[{"name":"Haptocorrin deficiency","type":"exact"},{"name":"R Binder deficiency with lactoferrin deficiency","type":"related"},{"name":"TCI deficiency","type":"exact"},{"name":"Tcn1 deficiency","type":"related"},{"name":"cobalamin Pseudodeficiency due to transcobalamin deficiency","type":"related"},{"name":"cobalamin R Binder Protein deficiency","type":"related"},{"name":"transcobalamin 1 deficiency","type":"related"},{"name":"transcobalamin 1 deficiency with lactoferrin deficiency","type":"related"},{"name":"transcobalamin I deficiency","type":"exact"},{"name":"transcobalamin-1 deficiency","type":"exact"}],"termid":"MONDO:0008659","xrefs":{"Monarch":{"xref_id":"0008659"}}}


id: GO:0010182
data:
  {"annotated_genes":["SJAG_00610","SJAG_02311","SJAG_02444","SJAG_02481","SJAG_04551","SJAG_01754","SJAG_00472","SJAG_01245","SJAG_00266","SJAG_01254","SJAG_02426","SJAG_00424","SJAG_00574","SJAG_01699","SJAG_04312","SJAG_03081","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105065,101032,106003,93427,105654,114664,108163,115696,108669],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[91947,107126,115516,91288,99626],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110034"},{"annotations":[101326,102023,88644],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902660"}]},"cv_name":"biological_process","definition":"The process in which a change in the level of a mono- or disaccharide such as glucose, fructose or sucrose triggers the expression of genes controlling metabolic and developmental processes.","definition_xrefs":["PMID:9014361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate mediated signaling","termid":"GO:0009756"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00424":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00610":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sugar mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sugar mediated signalling","type":"exact"}],"termid":"GO:0010182","terms_by_termid":{"GO:0010619":null,"GO:0110034":null,"GO:1902660":null}}


id: GO:0052544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response by cell wall thickening","termid":"GO:0052482"},{"relation_name":"is_a","term_name":"defense response by callose deposition","termid":"GO:0052542"},{"relation_name":"is_a","term_name":"callose deposition in cell wall","termid":"GO:0052543"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0071554"],"is_obsolete":false,"name":"defense response by callose deposition in cell wall","synonyms":[{"name":"callose deposition in cell wall during defense response","type":"related"},{"name":"callose localization in cell wall during defense response","type":"exact"},{"name":"cell wall callose deposition during defense response","type":"exact"},{"name":"cell wall callose localization during defense response","type":"exact"}],"termid":"GO:0052544"}


id: GO:0103054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A12 + O2 + 2-oxoglutarate = gibberellin A15 + carbon dioxide + succinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A12, 2-oxoglutarate:oxygen oxidoreductase activity (gibberellin A15-forming) (obsolete GO:0103054)","termid":"GO:0103054"}


id: PBO:0058425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4795","termid":"PBO:0058425"}


id: PBO:0060172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTUS1 divergent transcript","termid":"PBO:0060172"}


id: GO:0051677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"pullulan metabolic process","termid":"GO:0051676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"pullulan biosynthetic process","termid":"GO:0051677"}


id: MONDO:0013827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary hyperekplexia in which the cause of the disease is a mutation in the SLC6A5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperekplexia","termid":"MONDO:0021022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperekplexia 3","secondary_identifiers":["GARD:15825","MEDGEN:766202","OMIM:614618","DOID:0060698","UMLS:C3553288"],"synonyms":[{"name":"HKPX3","type":"exact"},{"name":"SLC6A5 hereditary hyperekplexia","type":"exact"},{"name":"hereditary hyperekplexia caused by mutation in SLC6A5","type":"exact"},{"name":"hyperekplexia 3","type":"exact"},{"name":"hyperekplexia type 3","type":"exact"}],"termid":"MONDO:0013827","xrefs":{"Monarch":{"xref_id":"0013827"}}}


id: GO:0120184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of focal adhesion disassembly","termid":"GO:0120182"},{"relation_name":"is_a","term_name":"negative regulation of cell-substrate junction organization","termid":"GO:0150118"},{"relation_name":"negatively_regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of focal adhesion disassembly","termid":"GO:0120184"}


id: PBO:0058437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5001","termid":"PBO:0058437"}


id: FYPO:0006294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation. Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["GO:0016236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype","termid":"FYPO:0000140"},{"relation_name":"is_a","term_name":"normal macroautophagy","termid":"FYPO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal macroautophagy during nitrogen starvation","synonyms":[{"name":"normal macroautophagy during cellular response to nitrogen starvation","type":"exact"},{"name":"normal macroautophagy during nitrogen depletion","type":"exact"},{"name":"normal macroautophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006294"}


id: PBO:0075513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 4","termid":"PBO:0075513"}


id: MONDO:0004538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical mucinous adenocarcinoma characterized by the presence of malignant glandular cells that resemble those of the endocervix.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical mucinous adenocarcinoma","termid":"MONDO:0002742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endocervical type cervical mucinous adenocarcinoma","secondary_identifiers":["NCIT:C40202","DOID:8340"],"synonyms":[{"name":"cervical adenocarcinoma, endocervical type","type":"exact"},{"name":"cervical mucinous adenocarcinoma, endocervical type","type":"exact"}],"termid":"MONDO:0004538","xrefs":{"Monarch":{"xref_id":"0004538"}}}


id: MONDO:1010795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in dogs in which the cause of the disease is a mutation in the TNXB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, dog","termid":"MONDO:1011493"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic-like, TNXB-related, dog","secondary_identifiers":["OMIA:002203-9615"],"synonyms":[{"name":"clEDS","type":"exact"}],"termid":"MONDO:1010795","xrefs":{"Monarch":{"xref_id":"1010795"}}}


id: FYPO:0003724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-adenosyl)-hexaphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased bis(5'-adenosyl)-hexaphosphatase activity","synonyms":[{"name":"reduced bis(5'-adenosyl)-hexaphosphatase activity","type":"exact"}],"termid":"FYPO:0003724"}


id: PBO:0088950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg12 conjugating enzyme Atg10","termid":"PBO:0088950"}


id: MONDO:1011565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroaxonal dystrophy that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroaxonal dystrophy, non-human animal","termid":"MONDO:1011444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy, sheep","secondary_identifiers":["OMIA:000715-9940"],"termid":"MONDO:1011565","xrefs":{"Monarch":{"xref_id":"1011565"}}}


id: PR:Q9C0X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16E9.19 gene.","definition_xrefs":["UniProtKB:Q9C0X2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.19","synonyms":[{"name":"Spom972h-SPBC16E9.19","type":"exact"}],"termid":"PR:Q9C0X2"}


id: PBO:0024833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase alpha subunit Fas2","termid":"PBO:0024833"}


id: GO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by cis-trans isomerization of a proline residue.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete histone peptidyl-prolyl isomerization (obsolete GO:0000412)","synonyms":[{"name":"histone proline isomerization","type":"exact"}],"termid":"GO:0000412"}


id: PBO:0027147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_farnesyltranstransferase_activity","termid":"PBO:0027147"}


id: GO:0071693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins in the extracellular region, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to extracellular region","termid":"GO:0035592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein transport within extracellular region","termid":"GO:0071693"}


id: FYPO:0007676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the directed movement of sterols within cells is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:32320462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal intracellular sterol transport","termid":"FYPO:0007676"}


id: PBO:0059230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L2","termid":"PBO:0059230"}


id: PBO:0027413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027413"}


id: MONDO:0800141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-severe combined immunodeficiency in which the cause of the disease is variation in the MAN2B2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MAN2B2 deficiency","termid":"MONDO:0800141","xrefs":{"Monarch":{"xref_id":"0800141"}}}


id: PBO:0057272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 496","termid":"PBO:0057272"}


id: PBO:0030901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_process_phenotype_during_vegetative_growth","termid":"PBO:0030901"}


id: GO:0006283
data:
  {"annotated_genes":["SJAG_03206","SJAG_03454","SJAG_04540","SJAG_01540","SJAG_04353","SJAG_04114","SJAG_00119","SJAG_02116","SJAG_04778","SJAG_01480"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87387,87572,89467,90077,91175,95929,100961,108531,110293,118044],"is_not":false,"summary":null,"term":"GO:0006283"}]},"cv_name":"biological_process","definition":"The nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["PMID:10197977","PMID:11900249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_01480":null,"SJAG_01540":null,"SJAG_02116":null,"SJAG_03206":null,"SJAG_03454":null,"SJAG_04114":null,"SJAG_04353":null,"SJAG_04540":null,"SJAG_04778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"transcription-coupled nucleotide-excision repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TC-NER","type":"exact"},{"name":"TCR","type":"related"},{"name":"transcription-coupled NER","type":"exact"},{"name":"transcription-coupled repair","type":"exact"}],"termid":"GO:0006283","terms_by_termid":{"GO:0006283":null}}


id: GO:0032084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a type I restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032072"},{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of type I site-specific deoxyribonuclease activity","synonyms":[{"name":"regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type I restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type I restriction enzyme regulator","type":"related"}],"termid":"GO:0032084"}


id: SO:0001388
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified asparagine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_asparagine","secondary_identifiers":["MOD:00903"],"synonyms":[{"name":"ModAsn","type":"exact"},{"name":"modified L asparagine","type":"exact"},{"name":"modified L-asparagine","type":"exact"}],"termid":"SO:0001388"}


id: GO:0086084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of a Purkinje myocyte with an ventricular cardiac muscle cell and contributes to the communication between the two cells.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0098631","GO:0005488"],"is_obsolete":false,"name":"cell adhesive protein binding involved in Purkinje myocyte-ventricular cardiac muscle cell communication","termid":"GO:0086084"}


id: PBO:0053700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 901","termid":"PBO:0053700"}


id: FYPO:0002396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"normal maintenance of protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal maintenance of protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002396"}


id: MONDO:1012188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephropathy, non-human animal","termid":"MONDO:1011907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, sheep","secondary_identifiers":["OMIA:000710-9940"],"termid":"MONDO:1012188","xrefs":{"Monarch":{"xref_id":"1012188"}}}


id: MONDO:0035499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic primary lymphedema characterized by unilateral or bilateral lower limb lymphedema of variable severity. The condition shows almost complete penetrance with onset in childhood or adolescence in females, whereas in males it shows incomplete penetrance with later onset of disease. Lymphoscintigraphy in more severely affected individuals reveals lymphatic abnormalities consistent with lymphangiectasia, valve dysfunction, and thoracic duct reflux.","definition_xrefs":["Orphanet:569816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CELSR1-related late-onset primary lymphedema","secondary_identifiers":["GARD:22306","MEDGEN:1802645","UMLS:C5681848"],"termid":"MONDO:0035499","xrefs":{"Monarch":{"xref_id":"0035499"}}}


id: PBO:0072321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 7","termid":"PBO:0072321"}


id: MONDO:0015270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Butyrylcholinesterase (BChE) deficiency is a metabolic disorder characterized by prolonged apnoea after the use of certain anesthetic drugs, including the muscle relaxants succinylcholine or mivacurium and other ester local anesthetics. The duration of the prolonged apnoea varies significantly depending on the extent of the enzyme deficiency.","definition_xrefs":["Orphanet:132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease involving other neurotransmitter deficiency","termid":"MONDO:0019253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"butyrylcholinesterase deficiency","secondary_identifiers":["SCTID:191397007","GARD:7482","OMIM:617936","MEDGEN:220923","UMLS:C1283400","MESH:C537417","ICD9:289.89","icd11.foundation:581237559"],"synonyms":[{"name":"Acholinesterasemia","type":"related"},{"name":"BCHED","type":"related"},{"name":"Suxamethonium sensitivity","type":"related"},{"name":"apnea, postanesthetic","type":"related"},{"name":"apnea, postanesthetic, susceptibility to, due to BCHE deficiency","type":"exact"},{"name":"butyrylcholinesterase deficiency","type":"exact"},{"name":"butyrylcholinesterase deficiency, fluoride-resistant, Japanese type","type":"related"},{"name":"cholinesterase 2 deficiency","type":"related"},{"name":"hypocholinesterasemia, fluoride-resistant, Japanese type","type":"related"},{"name":"pseudocholinesterase E1","type":"related"},{"name":"pseudocholinesterase deficiency","type":"related"},{"name":"succinylcholine sensitivity","type":"related"}],"termid":"MONDO:0015270","xrefs":{"Monarch":{"xref_id":"0015270"}}}


id: PBO:0026731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_anaphase","termid":"PBO:0026731"}


id: PR:Q9P378
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.02c","synonyms":[{"name":"Spom972h-gas1","type":"exact"}],"termid":"PR:Q9P378"}


id: GO:0039672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts natural killer cell activation in the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:10799855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host natural killer cell mediated immune response","termid":"GO:0039671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host natural killer cell activation","synonyms":[{"name":"suppression by virus of host NK-cell activation","type":"exact"},{"name":"suppression by virus of host natural killer cell activation","type":"narrow"}],"termid":"GO:0039672"}


id: PBO:0050957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon kappa","termid":"PBO:0050957"}


id: PBO:0067502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 640, pseudogene","termid":"PBO:0067502"}


id: PBO:0085950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant exhibits a respiratory growth defect and synthetic interactions with prohibitin (phb1) and gem1; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085950"}


id: PBO:0079581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 2","termid":"PBO:0079581"}


id: MONDO:0011155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar Neuromyopathy","secondary_identifiers":["OMIM:601846","UMLS:C1866139","MESH:C566617","MEDGEN:355637"],"synonyms":[{"name":"muscular dystrophy with rimmed vacuoles","type":"exact"},{"name":"muscular dystrophy, autosomal dominant, with rimmed vacuoles","type":"related"},{"name":"vacuolar Neuromyopathy","type":"exact"}],"termid":"MONDO:0011155","xrefs":{"Monarch":{"xref_id":"0011155"}}}


id: PBO:0045948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor","termid":"PBO:0045948"}


id: PBO:0062877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthodenticle homeobox 1","termid":"PBO:0062877"}


id: PR:Q09852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.12 gene.","definition_xrefs":["UniProtKB:Q09852","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transporter C23D3.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.12","synonyms":[{"name":"Spom972h-SPAC23D3.12","type":"exact"}],"termid":"PR:Q09852"}


id: MONDO:0004883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choroidal sclerosis","termid":"MONDO:0004885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"hereditary choroidal atrophy","secondary_identifiers":["ICD9:363.50","SCTID:74469006","UMLS:C0154893","MEDGEN:509703","DOID:9794","ICD9:363.5"],"termid":"MONDO:0004883","xrefs":{"Monarch":{"xref_id":"0004883"}}}


id: PBO:0028517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_present_during_mitosis","termid":"PBO:0028517"}


id: GO:0019208
data:
  {"annotated_genes":["SJAG_00229","SJAG_03272","SJAG_04999","SJAG_04627","SJAG_00534","SJAG_03940","SJAG_02380","SJAG_04638","SJAG_03353","SJAG_00095","SJAG_01142","SJAG_04871","SJAG_04968","SJAG_01901","SJAG_01270","SJAG_03793","SJAG_00526","SJAG_03681","SJAG_00369","SJAG_03309","SJAG_00078"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117699,87939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008597"},{"annotations":[117700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019211"},{"annotations":[92127,115039,105741,116175,96893,98785,114112,117075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[89488,88588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[92128,96894,95524,100462,92181,111881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019888"},{"annotations":[98627,87064,110521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[97054,89171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00229":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00534":null,"SJAG_01142":null,"SJAG_01270":null,"SJAG_01901":null,"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_03940":null,"SJAG_04627":null,"SJAG_04638":null,"SJAG_04871":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019208","terms_by_termid":{"GO:0004864":null,"GO:0004865":null,"GO:0008160":null,"GO:0008597":null,"GO:0019211":null,"GO:0019888":null,"GO:0072542":null}}


id: PBO:0075758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine repetitive matrix 1","termid":"PBO:0075758"}


id: FYPO:0007977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is abnormal during meiotic prophase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal homologous chromosome pairing during meiosis I prophase","termid":"FYPO:0007977"}


id: PBO:0034746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved GTPase Gpn2 (predicted)","termid":"PBO:0034746"}


id: PBO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 34 (pseudogene)","termid":"PBO:0045622"}


id: SO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region including the Transcription Start Site (TSS) of a gene and serving as a platform for Pre-Initiation Complex (PIC) assembly, enabling transcription of a gene under certain conditions.","direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic_promoter","synonyms":[{"name":"Eukaryotic promoter","type":"exact"}],"termid":"SO:0002221"}


id: PBO:0091118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine O-acetyltransferase activity","termid":"PBO:0091118"}


id: GO:0031001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brefeldin A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to brefeldin A","termid":"GO:0031001"}


id: PBO:0071875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 13","termid":"PBO:0071875"}


id: PBO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-UBR1 type","termid":"PBO:0002187"}


id: GO:0046276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylgallate metabolic process","termid":"GO:0019489"},{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"methylgallate catabolic process","secondary_identifiers":["MetaCyc:METHYLGALLATE-DEGRADATION-PWY"],"synonyms":[{"name":"methylgallate breakdown","type":"exact"},{"name":"methylgallate catabolism","type":"exact"},{"name":"methylgallate degradation","type":"exact"}],"termid":"GO:0046276"}


id: PBO:0048777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine monophosphate reductase 2","termid":"PBO:0048777"}


id: GO:0034013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic aldoxime = an aliphatic nitrile + H2O.","definition_xrefs":["RHEA:11316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aliphatic aldoxime dehydratase activity","secondary_identifiers":["MetaCyc:4.99.1.5-RXN","EC:4.8.1.2"],"synonyms":[{"name":"aliphatic aldoxime hydro-lyase activity","type":"exact"}],"termid":"GO:0034013"}


id: PR:O14135
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id: GO:0050246
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + questin = demethylsulochrin + NADP+.","definition_xrefs":["RHEA:10836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"questin monooxygenase (NADPH) activity","secondary_identifiers":["MetaCyc:QUESTIN-MONOOXYGENASE-RXN","KEGG_REACTION:R02417","EC:1.14.13.43"],"synonyms":[{"name":"questin oxygenase activity","type":"related"},{"name":"questin,NADPH:oxygen oxidoreductase (hydroxylating, anthraquinone-ring-opening)","type":"related"}],"termid":"GO:0050246"}


id: GO:1902674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right posteriolateral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GOC:giardia","PMID:16607022","GOC:TermGenie","PMID:5961344","ISBN:9780124260207","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right posteriolateral flagellum","termid":"GO:0097557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"right posteriolateral basal body","synonyms":[{"name":"cilial basal body of right posteriolateral cilium","type":"exact"},{"name":"cilial basal body of right posteriolateral flagellum","type":"exact"},{"name":"cilial basal body of right posterolateral cilium","type":"exact"},{"name":"cilial basal body of right posterolateral flagellum","type":"exact"},{"name":"ciliary basal body of right posteriolateral cilium","type":"exact"},{"name":"ciliary basal body of right posteriolateral flagellum","type":"exact"},{"name":"ciliary basal body of right posterolateral cilium","type":"exact"},{"name":"ciliary basal body of right posterolateral flagellum","type":"exact"},{"name":"cilium basal body of right posteriolateral cilium","type":"exact"},{"name":"cilium basal body of right posteriolateral flagellum","type":"exact"},{"name":"cilium basal body of right posterolateral cilium","type":"exact"},{"name":"cilium basal body of right posterolateral flagellum","type":"exact"},{"name":"microtubule basal body of right posteriolateral cilium","type":"exact"},{"name":"microtubule basal body of right posteriolateral flagellum","type":"exact"},{"name":"microtubule basal body of right posterolateral cilium","type":"exact"},{"name":"microtubule basal body of right posterolateral flagellum","type":"exact"},{"name":"right posteriolateral flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902674"}


id: MONDO:0021479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"neoplasm of oropharynx","termid":"MONDO:0021364"},{"relation_name":"is_a","term_name":"benign neoplasm of pharynx","termid":"MONDO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of oropharynx","secondary_identifiers":["ICD9:210.6","UMLS:C0347229","MEDGEN:87572","icd11.foundation:441557450","SCTID:92259008","NCIT:C4604"],"synonyms":[{"name":"benign neoplasm of the oropharynx","type":"exact"},{"name":"benign oropharyngeal neoplasm","type":"exact"},{"name":"benign oropharyngeal tumor","type":"exact"},{"name":"benign oropharyngeal tumour","type":"exact"},{"name":"benign tumor of oropharynx","type":"exact"},{"name":"benign tumor of the oropharynx","type":"exact"},{"name":"benign tumour of oropharynx","type":"exact"},{"name":"benign tumour of the oropharynx","type":"exact"},{"name":"oropharyngeal neoplasm benign","type":"exact"},{"name":"oropharynx benign neoplasm","type":"exact"}],"termid":"MONDO:0021479","xrefs":{"Monarch":{"xref_id":"0021479"}}}


id: MONDO:1011569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, crab-eating macaque","secondary_identifiers":["OMIA:000181-9541"],"termid":"MONDO:1011569","xrefs":{"Monarch":{"xref_id":"1011569"}}}


id: PBO:0079517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase pseudogene 1","termid":"PBO:0079517"}


id: GO:0019973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-13.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-13 binding","synonyms":[{"name":"IL-13 binding","type":"exact"}],"termid":"GO:0019973"}


id: PBO:0000252
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mkh1-Pek1-Spm1 MAP kinase","termid":"PBO:0000252"}


id: MONDO:0004261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process characterized by the proliferation of spindle to cuboidal myoepithelial cells around small breast ducts.","definition_xrefs":["NCIT:C40388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast myoepitheliosis","termid":"MONDO:0004262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periductal breast myoepitheliosis","secondary_identifiers":["DOID:7520","MEDGEN:274144","UMLS:C1518974"],"synonyms":[{"name":"periductal breast myoepitheliosis","type":"exact"}],"termid":"MONDO:0004261","xrefs":{"Monarch":{"xref_id":"0004261"}}}


id: PBO:0049401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCA1A neighbor","termid":"PBO:0049401"}


id: GO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"immunoglobulin production","secondary_identifiers":["GO:0048305","GO:0002378"],"synonyms":[{"name":"antibody production","type":"exact"},{"name":"immunoglobulin biosynthetic process","type":"narrow"},{"name":"immunoglobulin secretion","type":"narrow"}],"termid":"GO:0002377"}


id: MONDO:0033005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 1","secondary_identifiers":["DOID:0060364","MEDGEN:1634188","UMLS:C4551772","OMIM:251300","GARD:15199"],"synonyms":[{"name":"GAMOS1","type":"related"},{"name":"Galloway syndrome","type":"related"},{"name":"Galloway-Mowat syndrome 1","type":"exact"},{"name":"cerebellar ataxia with intellectual disability, optic atrophy, and skin abnormalities","type":"related"},{"name":"cerebellar ataxia with mental retardation, optic atrophy, and skin abnormalities","type":"related"},{"name":"microcephaly, hiatal hernia, and nephrotic syndrome","type":"related"},{"name":"nephrosis-microcephaly syndrome","type":"related"},{"name":"nephrosis-neuronal dysmigration syndrome","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive 5","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive 5, formerly","type":"related"}],"termid":"MONDO:0033005","xrefs":{"Monarch":{"xref_id":"0033005"}}}


id: MONDO:0016471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pachyonychia congenita (PC) is a rare genodermatosis predominantly featuring painful palmoplantar keratoderma, thickened nails, cysts and whitish oral mucosa.","definition_xrefs":["Orphanet:2309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita","secondary_identifiers":["GARD:10753","OMIMPS:167200","MEDGEN:78556","NCIT:C84986","icd11.foundation:1446983705","DOID:0050449","MESH:D053549","NORD:1542","UMLS:C0265334"],"synonyms":[{"name":"Jackson-Lawler type pachyonychia congenita","type":"exact"},{"name":"Jadassohn-Lewandowsky syndrome","type":"exact"},{"name":"PC","type":"exact"},{"name":"congenital pachyonychia","type":"related"},{"name":"pachyonychia congenita syndrome","type":"related"},{"name":"pachyonychia congenita type 1","type":"narrow"},{"name":"pachyonychia congenita, Jadassohn-Lewandowsky type","type":"exact"}],"termid":"MONDO:0016471","xrefs":{"Monarch":{"xref_id":"0016471"}}}


id: GO:0021525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of lateral motor column neurons. Lateral motor column neurons are generated only on limb levels and send axons into the limb mesenchyme. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dgh","PMID:11262869","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral motor column neuron differentiation","termid":"GO:0021525"}


id: PBO:0067644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 818, pseudogene","termid":"PBO:0067644"}


id: GO:0044725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The global programming of epigenetic modifications in the zygote following fertilization. The paternal genome undergoes active DNA demethylation before the first cell division, while the adjacent maternal genome is protected from this process.","definition_xrefs":["GOC:sp","PMID:22868271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic programming of gene expression","termid":"GO:0043045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"epigenetic programming in the zygotic pronuclei","synonyms":[{"name":"chromatin reprogramming in the zygote","type":"exact"}],"termid":"GO:0044725"}


id: PBO:0040747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain cytoplasmic RNA 1, pseudogene 2","termid":"PBO:0040747"}


id: GO:0000468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in generating the mature 3'-end of an LSU-rRNA derived from a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:krc","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","synonyms":[{"name":"processing at B2","type":"narrow"}],"termid":"GO:0000468"}


id: PBO:0056018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM14A mRNA processing body assembly factor","termid":"PBO:0056018"}


id: GO:0008798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a beta-linked aspartic residue from the N-terminus of a polypeptide.","definition_xrefs":["EC:3.4.19.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"},{"relation_name":"is_a","term_name":"threonine-type peptidase activity","termid":"GO:0070003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"beta-aspartyl-peptidase activity","secondary_identifiers":["MetaCyc:3.4.19.5-RXN","Reactome:R-HSA-5696365","Reactome:R-HSA-5692495"],"synonyms":[{"name":"beta-aspartyl dipeptidase activity","type":"related"},{"name":"beta-aspartyl peptidase activity","type":"related"}],"termid":"GO:0008798"}


id: PBO:0012017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialar to S. pombe SPAC1F8.07c (paralog)","termid":"PBO:0012017"}


id: MONDO:0015346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, idiopathic, generalized form of reflex epilepsy characterized by childhood onset, unique seizure manifestations, striking light sensitivity, and possible occurrence of generalized tonic-clonic seizures.","definition_xrefs":["Orphanet:139431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy with eyelid myoclonia","secondary_identifiers":["icd11.foundation:262814036","NORD:152960","SCTID:716278005","UMLS:C4274731","MEDGEN:901966","GARD:19916","MedDRA:10084303"],"synonyms":[{"name":"EEM","type":"exact"},{"name":"EMA","type":"exact"},{"name":"EMEA","type":"exact"},{"name":"Epilepsy with Eyelid Myoclonia","type":"exact"},{"name":"Jeavons syndrome","type":"exact"},{"name":"epilepsy with eyelid myoclonias","type":"exact"},{"name":"eyelid myoclonia with and without absences","type":"exact"}],"termid":"MONDO:0015346","xrefs":{"Monarch":{"xref_id":"0015346"}}}


id: GO:0035209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pupa over time, from its formation to the mature structure. The pupa is a dormant life stage interposed between the larval and the adult stages in insects that undergo a complete metamorphosis.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"instar larval or pupal development","termid":"GO:0002165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupal development","termid":"GO:0035209"}


id: GO:0042475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a dentin-containing tooth over time, from its formation to the mature structure. A dentin-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and is composed mainly of dentin, a dense calcified substance, covered by a layer of enamel.","definition_xrefs":["PMID:15355794","GOC:cjm","GOC:mah","PMID:10333884","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"odontogenesis of dentin-containing tooth","synonyms":[{"name":"odontogenesis of dentine-containing teeth","type":"exact"},{"name":"odontogenesis of dentine-containing tooth","type":"exact"},{"name":"odontogeny","type":"broad"},{"name":"odontosis","type":"broad"},{"name":"tooth development","type":"broad"}],"termid":"GO:0042475"}


id: GO:0003392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"},{"relation_name":"part_of","term_name":"retrograde extension","termid":"GO:0003389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in retrograde extension","termid":"GO:0003392"}


id: GO:2000811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of anoikis","termid":"GO:2000209"},{"relation_name":"negatively_regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anoikis","synonyms":[{"name":"negative regulation of detachment induced cell death","type":"exact"},{"name":"negative regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000811"}


id: PBO:0077294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 37","termid":"PBO:0077294"}


id: PBO:0061586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin G1","termid":"PBO:0061586"}


id: GO:0010134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway by which inorganic sulfate is activated, reduced and incorporated into sulfated compounds, where the activated sulfate, adenylyl-sulfate, is reduced to sulfite by the activity of adenylyl-sulfate reductase.","definition_xrefs":["MetaCyc:SULFMETII-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfate assimilation via adenylyl sulfate reduction","synonyms":[{"name":"sulphate assimilation via adenylyl sulphate reduction","type":"exact"}],"termid":"GO:0010134"}


id: GO:1901736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (R)-mevalonic acid.","definition_xrefs":["GOC:yaf","UniPathway:UPA00058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"},{"relation_name":"is_a","term_name":"(R)-mevalonic acid metabolic process","termid":"GO:1901735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"(R)-mevalonic acid catabolic process","synonyms":[{"name":"(R)-mevalonate breakdown","type":"exact"},{"name":"(R)-mevalonate catabolism","type":"exact"},{"name":"(R)-mevalonate degradation","type":"exact"},{"name":"(R)-mevalonic acid breakdown","type":"exact"},{"name":"(R)-mevalonic acid catabolism","type":"exact"},{"name":"(R)-mevalonic acid degradation","type":"exact"}],"termid":"GO:1901736"}


id: GO:0140457
data:
  {"annotated_genes":["SJAG_01465","SJAG_03664","SJAG_03286","SJAG_03635","SJAG_03041","SJAG_03997","SJAG_02401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86608,111369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[116885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[86609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032453"},{"annotations":[71182,86610,112195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[116886,111370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[93283,102407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a protein.","definition_xrefs":["PMID:24498420","PMID:28360925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein demethylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140457","terms_by_termid":{"GO:0032453":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null}}


id: PBO:0051730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 3","termid":"PBO:0051730"}


id: GO:1901805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-glucoside.","definition_xrefs":["PMID:15205427","GOC:yaf","PMID:8990303","GOC:TermGenie","PMID:16390337","Unipathway:UPA00237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-glucoside catabolic process","synonyms":[{"name":"beta-glucoside breakdown","type":"exact"},{"name":"beta-glucoside catabolism","type":"exact"},{"name":"beta-glucoside degradation","type":"exact"}],"termid":"GO:1901805"}


id: MONDO:1011241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, cattle","secondary_identifiers":["OMIA:000649-9913"],"termid":"MONDO:1011241","xrefs":{"Monarch":{"xref_id":"1011241"}}}


id: MONDO:0010262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotonia, congenital nystagmus, ataxia, and abnormal auditory brainstem responses","secondary_identifiers":["OMIM:300184","UMLS:C1970936","MEDGEN:373521","MESH:C537159"],"synonyms":[{"name":"hypotonia, congenital nystagmus, ataxia and abnormal auditory brainstem response","type":"related"},{"name":"hypotonia, congenital nystagmus, ataxia, and abnormal auditory brainstem responses","type":"exact"}],"termid":"MONDO:0010262","xrefs":{"Monarch":{"xref_id":"0010262"}}}


id: PBO:0055202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2627","termid":"PBO:0055202"}


id: GO:1903475
data:
  {"annotated_genes":["SJAG_01805","SJAG_04930","SJAG_00279","SJAG_03048","SJAG_03045","SJAG_00268","SJAG_01732","SJAG_04498","SJAG_02592","SJAG_00082","SJAG_04703","SJAG_00228","SJAG_01143","SJAG_04077","SJAG_04982","SJAG_04887","SJAG_03596","SJAG_03025","SJAG_02700","SJAG_03703","SJAG_00700","SJAG_02431","SJAG_04597","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87470,91528,91740,91788,94482,96842,96917,97115,97224,98095,100449,101606,101746,111011,111441,116165,117006,117586,117765,118553],"is_not":false,"summary":null,"term":"GO:1903475"},{"annotations":[97225],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[101550],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[93610,89203],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[93005,93576,118658],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any actomyosin contractile ring assembly that is involved in mitotic cytokinesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"},{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in mitotic cytokinesis","termid":"GO:1902407"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049","GO:0030036","GO:0044085","GO:0000281"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1903475","terms_by_termid":{"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: PBO:0070608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 76","termid":"PBO:0070608"}


id: GO:1990033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a dendritic tree where it branches, giving rise to a dendritic branch.","definition_xrefs":["GOC:aruk","NIF_Subcellular:sao1348591767","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection branch point","termid":"GO:0061845"},{"relation_name":"part_of","term_name":"dendritic tree","termid":"GO:0097447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic branch point","synonyms":[{"name":"branch point of dendrite","type":"exact"}],"termid":"GO:1990033"}


id: GO:0071237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacteriocin stimulus. A bacteriocin is a protein substance released by certain bacteria that kills but does not lyse closely related strains of bacteria. Specific bacteriocins attach to specific receptors on cell walls and induce specific metabolic block, e.g. cessation of nucleic acid or protein synthesis of oxidative phosphorylation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacteriocin","termid":"GO:0046678"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bacteriocin","termid":"GO:0071237"}


id: MONDO:0012751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial abdominal aortic aneurysm","termid":"MONDO:0007031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial abdominal, 3","secondary_identifiers":["OMIM:611891","UMLS:C2678470","MESH:C567501","GARD:16493","MEDGEN:394525"],"synonyms":[{"name":"AAA3","type":"exact"},{"name":"aneurysm, familial abdominal 3","type":"exact"},{"name":"aortic aneurysm, familial abdominal, 3","type":"exact"}],"termid":"MONDO:0012751","xrefs":{"Monarch":{"xref_id":"0012751"}}}


id: PBO:0049756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCCS divergent transcript","termid":"PBO:0049756"}


id: PBO:0067927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 229","termid":"PBO:0067927"}


id: MONDO:0013502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary localized cutaneous amyloidosis","termid":"MONDO:0007101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"amyloidosis, primary localized cutaneous, 2","secondary_identifiers":["GARD:18638","MEDGEN:462754","UMLS:C3151404","OMIM:613955","DOID:0080931"],"synonyms":[{"name":"PLCA2","type":"related"},{"name":"amyloidosis, primary localised cutaneous, type 2","type":"exact"},{"name":"amyloidosis, primary localized cutaneous, 2","type":"exact"},{"name":"amyloidosis, primary localized cutaneous, type 2","type":"exact"}],"termid":"MONDO:0013502","xrefs":{"Monarch":{"xref_id":"0013502"}}}


id: GO:0009445
data:
  {"annotated_genes":["SJAG_03288","SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[86624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving putrescine, 1,4-diaminobutane; putrescine can be formed by decarboxylation of ornithine and is the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"putrescine metabolism","type":"exact"}],"termid":"GO:0009445","terms_by_termid":{"GO:0009447":null,"GO:0033387":null}}


id: PBO:0076403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 1 like","termid":"PBO:0076403"}


id: PBO:0044578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor-like 5 pseudogene 2","termid":"PBO:0044578"}


id: PBO:0090404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A amino terminus domain (NTD) isomerase Ani1","termid":"PBO:0090404"}


id: PBO:0086087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein packaged into COPII vesicles for ER to Golgi trafficking; forms a complex with Emp47p that may function in trafficking plasma membrane glycoproteins through early secretory pathway; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0086087"}


id: GO:0035737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of forcing a substance into another organism, either by penetrating the skin of the other organism or by applying the substance externally to a sensitive tissue such as those that surround the eyes.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete injection of substance in to other organism (obsolete GO:0035737)","termid":"GO:0035737"}


id: MONDO:0002129
data:
  {"annotated_genes":["SJAG_01349","SJAG_05979","SJAG_03453","SJAG_03905","SJAG_01748","SJAG_04287","SJAG_01013"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86433,86430,86585,86432,86586,86431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[85391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the bone or articular cartilage.","definition_xrefs":["NCIT:C4016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_04287":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["CSP:2019-1041","UMLS:C0279530","EFO:1000350","MESH:D001859","DOID:184","ICD9:170.9","MEDGEN:79002","SCTID:428281000"],"synonyms":[{"name":"CA - bone cancer","type":"exact"},{"name":"bone cancer","type":"exact"},{"name":"bone neoplasm","type":"broad"},{"name":"bone tumor","type":"broad"},{"name":"bone tumour","type":"broad"},{"name":"cancer of bone","type":"exact"},{"name":"cancer of skeletal element","type":"exact"},{"name":"cancer of the bone","type":"exact"},{"name":"malignant bone neoplasm","type":"exact"},{"name":"malignant bone tumor","type":"exact"},{"name":"malignant bone tumour","type":"exact"},{"name":"malignant neoplasm of bone","type":"exact"},{"name":"malignant neoplasm of skeletal element","type":"exact"},{"name":"malignant neoplasm of the bone","type":"exact"},{"name":"malignant osseous neoplasm","type":"exact"},{"name":"malignant osseous tumor","type":"exact"},{"name":"malignant osseous tumour","type":"exact"},{"name":"malignant skeletal element neoplasm","type":"exact"},{"name":"malignant tumor of bone","type":"exact"},{"name":"malignant tumor of the bone","type":"exact"},{"name":"malignant tumour of bone","type":"exact"},{"name":"malignant tumour of the bone","type":"exact"},{"name":"osseous cancer","type":"exact"},{"name":"osseous tumor","type":"broad"},{"name":"osseous tumour","type":"broad"},{"name":"skeletal element cancer","type":"exact"}],"termid":"MONDO:0002129","terms_by_termid":{"MONDO:0002629":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0002129"}}}


id: MONDO:0043919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lung due to harmful effects of ionizing or non-ionizing radiation.","definition_xrefs":["MESH:D017564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"},{"relation_name":"is_a","term_name":"radiation-induced disorder","termid":"MONDO:0043459"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation pneumonitis","secondary_identifiers":["icd11.foundation:1914397767","SCTID:84004001"],"synonyms":[{"name":"Pneumonias, radiation","type":"related"},{"name":"Pneumonitides, radiation","type":"related"},{"name":"fibrosis, radiation","type":"related"},{"name":"pneumonia, radiation","type":"related"},{"name":"pneumonitis, radiation","type":"related"},{"name":"pulmonary radiation alveolitis","type":"related"},{"name":"radiation Pneumonias","type":"related"},{"name":"radiation Pneumonitides","type":"related"},{"name":"radiation fibrosis","type":"related"},{"name":"radiation pneumonia","type":"related"},{"name":"radiation pneumonitis","type":"exact"}],"termid":"MONDO:0043919","xrefs":{"Monarch":{"xref_id":"0043919"}}}


id: MONDO:0700202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bunyaviridae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bunyaviridae infectious disease, non-human animal","termid":"MONDO:0700202","xrefs":{"Monarch":{"xref_id":"0700202"}}}


id: MONDO:0022586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone dysplasia Moore type","secondary_identifiers":["GARD:923"],"termid":"MONDO:0022586","xrefs":{"Monarch":{"xref_id":"0022586"}}}


id: FYPO:0001119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other in the vegetative growth phase of the life cycle. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tapered cell","termid":"FYPO:0000014"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"tapered vegetative cell","synonyms":[{"name":"bottle-shaped vegetative cell","type":"exact"},{"name":"bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, bottle/skittle during vegetative growth","type":"exact"},{"name":"skittle-shaped cell during vegetative growth","type":"exact"},{"name":"tapered cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001119"}


id: GO:0140704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3',2' cyclic GMP-AMP (cGAMP) nucleotide, a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 3',5' and 2',5' linkages.","definition_xrefs":["PMID:34261127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"3',2'-cyclic GMP-AMP binding","synonyms":[{"name":"3',2' cyclic-GMP-AMP binding","type":"exact"},{"name":"3',2'-cGAMP binding","type":"exact"},{"name":"3',2'-cyclic GAMP binding","type":"exact"}],"termid":"GO:0140704"}


id: PBO:0059523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6","termid":"PBO:0059523"}


id: GO:0015019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucosaminyl-[heparan sulfate](n) + acetyl-CoA = N-acetyl-alpha-D-glucosaminyl-[heparan sulfate](n) + CoA + H+.","definition_xrefs":["RHEA:15125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"heparan-alpha-glucosaminide N-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.78-RXN","EC:2.3.1.78","Reactome:R-HSA-1678660","Reactome:R-HSA-2090085","Reactome:R-HSA-2263492","Reactome:R-HSA-9036056"],"synonyms":[{"name":"acetyl-CoA:alpha-glucosaminide N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:heparan-alpha-D-glucosaminide N-acetyltransferase activity","type":"related"},{"name":"heparin-alpha-glucosaminide N-acetyltransferase activity","type":"related"}],"termid":"GO:0015019"}


id: GO:0016530
data:
  {"annotated_genes":["SJAG_04553","SJAG_02895","SJAG_03231","SJAG_03296","SJAG_01418","SJAG_03862","SJAG_04403","SJAG_00449","SJAG_02994"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98134,99224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140663"},{"annotations":[101306,103882,88239,106645,92335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016531"},{"annotations":[99761,113013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034986"},{"annotations":[92337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016532"}]},"cv_name":"molecular_function","definition":"Binding to and delivering metal ions to a target protein.","definition_xrefs":["PMID:11739376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_01418":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03231":null,"SJAG_03296":null,"SJAG_03862":null,"SJAG_04403":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"metallochaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016530","terms_by_termid":{"GO:0016531":null,"GO:0016532":null,"GO:0034986":null,"GO:0140663":null}}


id: MONDO:0011018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceedingly rare form of brachyolmia, characterized by mild platyspondyly, broad ilia, elongated femoral necks with coxa valga, scoliosis, and short trunked short stature associated with amelogenesis imperfecta of both primary and permanent dentition.","definition_xrefs":["Orphanet:2899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachyolmia-amelogenesis imperfecta syndrome","secondary_identifiers":["UMLS:C1832594","MEDGEN:318659","SCTID:716195006","DOID:0090143","OMIM:601216","GARD:5478"],"synonyms":[{"name":"DASS","type":"exact"},{"name":"STHAG6","type":"exact"},{"name":"Verloes Bourguignon syndrome","type":"related"},{"name":"Verloes-Bourguignon syndrome","type":"exact"},{"name":"amelogenesis imperfecta and platyspondyly","type":"related"},{"name":"dental anomalies and short stature","type":"exact"},{"name":"platyspondyly with amelogenesis imperfecta","type":"exact"},{"name":"platyspondyly-amelogenesis imperfecta syndrome","type":"exact"},{"name":"selective tooth agenesis 5","type":"exact"},{"name":"skeletal dysplasia with amelogenesis imperfecta and platyspondyly","type":"related"},{"name":"tooth agenesis, selective, 6","type":"exact"},{"name":"tooth agenesis, selective, 6, formerly","type":"related"}],"termid":"MONDO:0011018","xrefs":{"Monarch":{"xref_id":"0011018"}}}


id: PR:O74359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28E12.02 gene.","definition_xrefs":["UniProtKB:O74359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 60 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.02","synonyms":[{"name":"Spom972h-SPBC28E12.02","type":"exact"}],"termid":"PR:O74359"}


id: MONDO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An allergy to Penicillin.","definition_xrefs":["NCIT:C34911"],"gene_count":0,"genotype_count":0,"name":"obsolete penicillin allergy (obsolete MONDO:0000795)","secondary_identifiers":["DOID:0060520","ICD9:V14.0","ICD9:995.27","SCTID:91936005"],"synonyms":[{"name":"allergy of penicillin","type":"exact"},{"name":"penicillin allergic disease","type":"exact"}],"termid":"MONDO:0000795","xrefs":{"Monarch":{"xref_id":"0000795"}}}


id: PBO:0063820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology like domain family B member 2","termid":"PBO:0063820"}


id: GO:0060779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secondary leaflet attains its shape. A secondary leaflet develops by branching or division of a primary leaflet.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary leaflet morphogenesis","termid":"GO:0060779"}


id: GO:0030448
data:
  {"annotated_genes":["SJAG_00124","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118323,118324],"is_not":false,"summary":null,"term":"GO:0030448"}]},"cv_name":"biological_process","definition":"Growth of fungi as threadlike, tubular structures that may contain multiple nuclei and may or may not be divided internally by septa, or cross-walls.","definition_xrefs":["GOC:mcc","ISBN:0471522295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyphal growth","references_by_uniquename":{"PMID:34427722":null},"secondary_identifiers":["GO:0075061"],"synonyms":[{"name":"formation of symbiont invasive hypha in host","type":"exact"},{"name":"formation of symbiont invasive hypha within host","type":"exact"},{"name":"formation of symbiont invasive hypha within host during symbiotic interaction","type":"exact"},{"name":"invasive hyphal growth","type":"exact"},{"name":"symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0030448","terms_by_termid":{"GO:0030448":null}}


id: GO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of an area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and target cell, which facilitates activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction.","definition_xrefs":["PMID:11244041","GOC:mgi_curators","PMID:11376330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"},{"relation_name":"part_of","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immunological synapse formation","synonyms":[{"name":"formation of immunological synapse","type":"exact"}],"termid":"GO:0001771"}


id: PBO:0051040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant alpha 1","termid":"PBO:0051040"}


id: PBO:0039592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 9","termid":"PBO:0039592"}


id: MONDO:0013100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 8","secondary_identifiers":["UMLS:C2751607","MESH:C567802","GARD:15609","OMIM:613055","MEDGEN:414420"],"synonyms":[{"name":"ATFB8","type":"exact"},{"name":"atrial fibrillation, familial, 8","type":"exact"}],"termid":"MONDO:0013100","xrefs":{"Monarch":{"xref_id":"0013100"}}}


id: GO:0000708
data:
  {"annotated_genes":["SJAG_01410","SJAG_03751","SJAG_01708","SJAG_03221","SJAG_02267","SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98256,106823,109451],"is_not":false,"summary":null,"term":"GO:0000708"},{"annotations":[87693,99733,92079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules. This occurs during meiosis.","definition_xrefs":["PMID:10915877","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand invasion","termid":"GO:0042148"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01410":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"meiotic strand invasion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic D-loop biosynthesis","type":"related"},{"name":"meiotic D-loop formation","type":"related"},{"name":"meiotic displacement loop biosynthesis","type":"related"},{"name":"meiotic displacement loop formation","type":"related"}],"termid":"GO:0000708","terms_by_termid":{"GO:0000708":null,"GO:0010774":null}}


id: MONDO:0024677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An insulin-producing neuroendocrine tumor arising from the beta cells of the pancreas. Patients exhibit symptoms related to hypoglycemia due to inappropriate secretion of insulin.","definition_xrefs":["NCIT:C95598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic insulin-producing neuroendocrine tumor","termid":"MONDO:0005048"},{"relation_name":"is_a","term_name":"functional pancreatic neuroendocrine tumor","termid":"MONDO:0023206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic insulinoma","secondary_identifiers":["SCTID:302822000","UMLS:C0021670","DOID:3892","MEDGEN:43907","HP:0012197","NANDO:2200398","MESH:D007340","MedDRA:10022498"],"synonyms":[{"name":"Insulinomas","type":"related"},{"name":"Insulomas","type":"related"},{"name":"adenoma, beta cell","type":"related"},{"name":"adenoma, beta-cell","type":"related"},{"name":"adenomas, beta-cell","type":"related"},{"name":"beta cell tumor","type":"related"},{"name":"beta cell tumour","type":"related"},{"name":"beta-cell adenoma","type":"related"},{"name":"beta-cell adenomas","type":"related"},{"name":"beta-cell tumor","type":"related"},{"name":"beta-cell tumors","type":"related"},{"name":"beta-cell tumour","type":"related"},{"name":"beta-cell tumours","type":"related"},{"name":"insulin-producing tumour of islet cells","type":"related"},{"name":"insulinoma","type":"exact"},{"name":"insulinoma tumor suppressor GENE locus","type":"related"},{"name":"insulinoma tumour suppressor GENE locus","type":"related"},{"name":"insuloma","type":"related"},{"name":"islet cell adenoma","type":"related"},{"name":"pancreatic insulinoma","type":"exact"},{"name":"tumor, beta-cell","type":"related"},{"name":"tumors, beta-cell","type":"related"}],"termid":"MONDO:0024677","xrefs":{"Monarch":{"xref_id":"0024677"}}}


id: PBO:0090186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Crt10, involved in ribosomal RNA decay","termid":"PBO:0090186"}


id: PBO:0031454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_morphology_during_vegetative_growth","termid":"PBO:0031454"}


id: GO:0047904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ubiquinone + keto-D-fructose = 5-dehydro-D-fructose + a ubiquinol.","definition_xrefs":["RHEA:22304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fructose 5-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00873","MetaCyc:FRUCTOSE-5-DEHYDROGENASE-RXN","EC:1.1.5.14"],"synonyms":[{"name":"D-fructose dehydrogenase activity","type":"related"}],"termid":"GO:0047904"}


id: MONDO:1010630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chediak-Higashi syndrome that occurs in killer whale.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chediak-Higashi syndrome, non-human animal","termid":"MONDO:1010070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome, killer whale","secondary_identifiers":["OMIA:000185-9733"],"termid":"MONDO:1010630","xrefs":{"Monarch":{"xref_id":"1010630"}}}


id: GO:2000067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of root morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant organ morphogenesis","termid":"GO:1905421"},{"relation_name":"regulates","term_name":"root morphogenesis","termid":"GO:0010015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of root morphogenesis","termid":"GO:2000067"}


id: PBO:0069650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 927, pseudogene","termid":"PBO:0069650"}


id: PATO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morphology","termid":"PATO:0000051"}


id: MONDO:0005668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypersensitivity granulomatous pneumonitis caused by the inhalation of avian antigens that are present in the dust of the droppings and feathers of many species of birds. In the acute phase it manifests as fever, chills, dyspnea, cough, and chest tightness. Chronic exposure may lead to interstitial lung fibrosis.","definition_xrefs":["NCIT:C34425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"},{"relation_name":"is_a","term_name":"occupational lung disease","termid":"MONDO:0022736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"bird fancier's lung","secondary_identifiers":["ICD9:495.2","SCTID:69339004","DOID:13891","MedDRA:10004941","MEDGEN:586","MESH:D001716","ICD10CM:J67.2","GARD:16924","UMLS:C0005592","icd11.foundation:912113736","Orphanet:99908"],"synonyms":[{"name":"Avian hypersensitivity pneumonitis","type":"exact"},{"name":"bird breeder's lung","type":"exact"},{"name":"bird fancier lung","type":"exact"},{"name":"bird fancier's lung","type":"exact"},{"name":"bird-breeder's lung","type":"related"},{"name":"bird-fancier's lung","type":"exact"},{"name":"bird-fanciers' lung","type":"exact"},{"name":"pigeon breeder's lung","type":"exact"},{"name":"pigeon-breeder lung disease","type":"exact"},{"name":"pigeon-breeder's lung","type":"exact"},{"name":"poultry worker's lung","type":"related"}],"termid":"MONDO:0005668","xrefs":{"Monarch":{"xref_id":"0005668"}}}


id: PBO:0048297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II alpha subunit","termid":"PBO:0048297"}


id: PBO:0113183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-binding ER tricalbin involved in ER-plasma membrane tethering; one of at least 7 proteins (Ice2p, Ist2p, Scs2/Scs22p, Tcb1-Tcb3p) that affect cER tethering and contact with the plasma membrane (PM); regulates PI4P levels by controlling access of Sac1p to its substrate PI4P in the PM; regulates PM phospholipid homeostasis; contains 3 calcium and lipid binding domains; localizes to the cortical ER, the cell periphery and is enriched in bud membranes; mRNA is targeted to the bud tip","termid":"PBO:0113183"}


id: PBO:0072447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 11","termid":"PBO:0072447"}


id: GO:0010628
data:
  {"annotated_genes":["SJAG_00184","SJAG_02303","SJAG_01111","SJAG_05265","SJAG_00441","SJAG_00641","SJAG_01653","SJAG_01436","SJAG_02981","SJAG_03550","SJAG_00873","SJAG_04613","SJAG_02549","SJAG_03787","SJAG_05313","SJAG_04005","SJAG_01622","SJAG_02447","SJAG_02500","SJAG_03145","SJAG_00045","SJAG_07011","SJAG_01110","SJAG_04213","SJAG_04369","SJAG_02254","SJAG_01465","SJAG_03576","SJAG_01513","SJAG_02589","SJAG_00087","SJAG_01040","SJAG_03668","SJAG_02043","SJAG_02385","SJAG_04097","SJAG_03366","SJAG_04825","SJAG_01517","SJAG_00739","SJAG_02798","SJAG_03579","SJAG_03776","SJAG_02329","SJAG_00735","SJAG_03752","SJAG_00797","SJAG_05192","SJAG_03255","SJAG_00868","SJAG_02773","SJAG_02872","SJAG_03441","SJAG_01230","SJAG_02846","SJAG_00769","SJAG_03883","SJAG_00440","SJAG_04959","SJAG_02170","SJAG_01804","SJAG_04755","SJAG_00996","SJAG_04435","SJAG_02869","SJAG_03944","SJAG_00896","SJAG_02573","SJAG_00349","SJAG_01047","SJAG_04205","SJAG_02189","SJAG_02458","SJAG_01611","SJAG_02370","SJAG_04038","SJAG_01711","SJAG_01016","SJAG_03758","SJAG_02906","SJAG_02314","SJAG_04576","SJAG_04194","SJAG_04989","SJAG_04946","SJAG_01475","SJAG_03599","SJAG_03696","SJAG_03431","SJAG_00743","SJAG_05020","SJAG_00581","SJAG_02927","SJAG_03694","SJAG_01658","SJAG_04274","SJAG_04758","SJAG_03884","SJAG_02571","SJAG_00584","SJAG_01325","SJAG_02066","SJAG_01919","SJAG_03839","SJAG_02466","SJAG_02812","SJAG_02541","SJAG_02768","SJAG_03283","SJAG_02723","SJAG_02018","SJAG_00746","SJAG_04596","SJAG_01249","SJAG_02058","SJAG_03033"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88727,89401],"is_not":false,"summary":null,"term":"GO:0010628"},{"annotations":[117438,89399,78068,99279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[95448,88692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[88693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[88993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[90869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[105811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[107643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[87779,105813,116260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[97902,111804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[99644,101095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[117536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[91362,74652,73264,110067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[108314,108315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[100194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[94003,108317,108316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"},{"annotations":[95083,113366,109618,103027,93210,93354,87371,86872,94669,87554,102295,114536,89798,107038,98340,93382,91500,95089,104183,89276,104931,97702,88491,105907,96282,90617,97867,101961,112110,113439,106488,89003,115484,115423,117090,106840,89905,109753,102544,106602,104191,93507,116673,107617,97436,98585,110895,87015,87194,93841,92709,95642,97015,114141,114522,116399,89919,93320,88318,106059,95848,112283,113355,114389,114838,115673,104789,108732,116583,116694,94644,113528,100746,92975,103734,93410,87702,91992,93334,111686,108619,100162,112451,113852,116039,108219,116742,108495,88085,112266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of gene expression. 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id: GO:0046921
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id: MONDO:0022785
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id: PBO:0067802
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id: GO:0048942
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id: GO:0001054
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id: GO:0090741
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id: GO:0002289
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id: _global:transports
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  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between p and c when p is a transport process or transporter activity and the outcome of this p is to move c from one location to another.","direct_ancestors":[{"relation_name":"is_a","term_name":"transports_or_maintains_localization_of","termid":"_global:transports_or_maintains_localization_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transports","secondary_identifiers":["RO:0002020"],"termid":"_global:transports"}


id: MONDO:0019540
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id: MONDO:0008427
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id: MONDO:0018894
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id: CL:0000596
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id: PBO:0057471
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id: MONDO:0002474
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id: PBO:0034544
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id: PBO:0042464
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id: PBO:0046674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESX homeobox 1","termid":"PBO:0046674"}


id: PBO:0030336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030336"}


id: PBO:0077298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 39A","termid":"PBO:0077298"}


id: PBO:0071264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 9","termid":"PBO:0071264"}


id: GO:0071283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(III) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron(III) ion","termid":"GO:0010041"},{"relation_name":"is_a","term_name":"cellular response to iron ion","termid":"GO:0071281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to iron(III) ion","synonyms":[{"name":"cellular response to iron(III)","type":"exact"}],"termid":"GO:0071283"}


id: GO:1902829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GOC:mr","GO_REF:0000058","PMID:21730158","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spinal cord association neuron differentiation","synonyms":[{"name":"regulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902829"}


id: MONDO:0008793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomatosis, diffuse Corticomeningeal, of Divry and van Bogaert","secondary_identifiers":["OMIM:206570","UMLS:C1859783","MEDGEN:347234","MESH:C536367"],"synonyms":[{"name":"Corticomeningeal angiomatosis, myelination of the white substance of the centrum ovale, hemianopsia and marbled skin","type":"related"},{"name":"Divry-Van Bogaert syndrome","type":"related"},{"name":"angiomatosis, diffuse Corticomeningeal, of Divry and van Bogaert","type":"exact"}],"termid":"MONDO:0008793","xrefs":{"Monarch":{"xref_id":"0008793"}}}


id: PBO:0043333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmin","termid":"PBO:0043333"}


id: PBO:0083651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endocytic site protein required for stress-induced cell elongation; may link the polarization signal with the endocytic machinery to facilitate adaptive morphogenesis under conditions of stress; interacts with the polarity regulator Cdc42p, the SH3 domains of actin patch components and actin filaments; contains a Rho-GAP domain lacking the catalytic arginine finger, PXXP motifs and an xACT (F-actin binding) motif; promoter contains a consensus binding sequence for transcription factor Abf1p","termid":"PBO:0083651"}


id: MONDO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic neoplasm that arises from the ovary and is characterized by the presence of mullerian-type epithelial tissue in a mesenchymal sarcomatous stroma. The presence of a high grade sarcomatous component is associated with recurrences and metastases.","definition_xrefs":["NCIT:C7317"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian carcinosarcoma","termid":"MONDO:0003792"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian adenosarcoma","secondary_identifiers":["DOID:4115","MEDGEN:277458","UMLS:C1335169"],"synonyms":[{"name":"adenosarcoma of ovary","type":"exact"},{"name":"ovarian Mullerian adenosarcoma","type":"exact"},{"name":"ovarian Müllerian adenosarcoma","type":"exact"},{"name":"ovarian adenosarcoma","type":"exact"},{"name":"ovarian mesodermal adenosarcoma","type":"exact"},{"name":"ovarian mullerian adenosarcoma","type":"exact"},{"name":"ovary adenosarcoma","type":"exact"}],"termid":"MONDO:0002880","xrefs":{"Monarch":{"xref_id":"0002880"}}}


id: GO:0106386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3R-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH.","definition_xrefs":["PMID:19571038","PMID:25203508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-hydroxyacyl-CoA dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.1.1.n12","RHEA:32711"],"synonyms":[{"name":"(3R)-hydroxyacyl-CoA dehydrogenase (NAD) activity","type":"exact"}],"termid":"GO:0106386"}


id: MONDO:0007790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal dominant hereditary demyelinating motor and sensory neuropathy (obsolete MONDO:0015359)","termid":"MONDO:0015359"},{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal recessive hereditary demyelinating motor and sensory neuropathy (obsolete MONDO:0015361)","termid":"MONDO:0015361"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 3","secondary_identifiers":["Orphanet:64748","SCTID:111499002","UMLS:C0011195","NCIT:C133087","OMIM:145900","DOID:0050540","GARD:9204","MEDGEN:3710","NORD:1037"],"synonyms":[{"name":"CMT3","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 3","type":"exact"},{"name":"Charcot-Marie-Tooth disease, type 3","type":"exact"},{"name":"DSN","type":"related"},{"name":"Dejerine-Sottas Syndrome","type":"exact"},{"name":"Dejerine-Sottas neuropathy","type":"exact"},{"name":"Dejerine-Sottas syndrome","type":"exact"},{"name":"HMSN 3","type":"exact"},{"name":"HMSN III","type":"exact"},{"name":"HMSN3","type":"exact"},{"name":"dejerine-sottas disease","type":"exact"},{"name":"hereditary motor and sensory neuropathy 3","type":"related"},{"name":"hereditary motor and sensory neuropathy type 3","type":"exact"},{"name":"hereditary motor and sensory neuropathy type III","type":"exact"},{"name":"hypertrophic neuropathy of Dejerine-Sottas","type":"exact"},{"name":"hypertrophic neuropathy of infancy","type":"related"}],"termid":"MONDO:0007790","xrefs":{"Monarch":{"xref_id":"0007790"}}}


id: GO:0045450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which bicoid mRNA is transported to and maintained within the oocyte as part of the specification of the anterior/posterior axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"bicoid mRNA localization","synonyms":[{"name":"bicoid mRNA localisation","type":"exact"},{"name":"establishment and maintenance of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045450"}


id: PBO:0076071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stimulated by retinoic acid 8","termid":"PBO:0076071"}


id: PBO:0082427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bisphosphate-3'-nucleotidase; involved in salt tolerance and methionine biogenesis; dephosphorylates 3'-phosphoadenosine-5'-phosphate and 3'-phosphoadenosine-5'-phosphosulfate, intermediates of the sulfate assimilation pathway; human homolog BPNT1 complements yeast null mutant","termid":"PBO:0082427"}


id: PBO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor (predicted)","termid":"PBO:0004283"}


id: PBO:0059254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L20 pseudogene 1","termid":"PBO:0059254"}


id: GO:0008745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides.","definition_xrefs":["EC:3.5.1.28","PMID:22748813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-acetylmuramoyl-L-alanine amidase activity","secondary_identifiers":["MetaCyc:3.4.24.32-RXN","Reactome:R-HSA-6799977"],"synonyms":[{"name":"N-acetylmuramic acid L-alanine amidase activity","type":"related"},{"name":"N-acetylmuramoyl-L-alanine amidase type I","type":"related"},{"name":"N-acetylmuramoyl-L-alanine amidase type II","type":"related"},{"name":"N-acetylmuramyl-L-alanine amidase activity","type":"related"},{"name":"N-acetylmuramylalanine amidase activity","type":"related"},{"name":"N-acylmuramyl-L-alanine amidase activity","type":"related"},{"name":"acetylmuramoyl-alanine amidase activity","type":"related"},{"name":"acetylmuramyl-L-alanine amidase activity","type":"related"},{"name":"acetylmuramyl-alanine amidase activity","type":"related"}],"termid":"GO:0008745"}


id: PBO:0073882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 11 member 2","termid":"PBO:0073882"}


id: PBO:0034295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_synaptic_terminal_of","termid":"PBO:0034295"}


id: MONDO:0016747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that affects the central nervous system. It is characterized by pleomorphism, melanin pigmentation, a high mitotic rate, necrosis, and hemorrhage. It is a highly aggressive and radioresistant tumor. The prognosis is usually poor.","definition_xrefs":["NCIT:C5505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system melanocytic neoplasm","termid":"MONDO:0003222"},{"relation_name":"is_a","term_name":"non-cutaneous melanoma","termid":"MONDO:0006320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary melanoma of the central nervous system","secondary_identifiers":["MEDGEN:578849","icd11.foundation:539210076","Orphanet:252050","ONCOTREE:PCNSM","GARD:12016","UMLS:C0349626"],"synonyms":[{"name":"CNS melanoma","type":"exact"},{"name":"Central nervous system melanoma","type":"exact"},{"name":"central nervous system melanoma","type":"exact"},{"name":"central nervous system melanoma (disease)","type":"exact"},{"name":"malignant melanoma of meninges","type":"narrow"},{"name":"melanoma (disease) of central nervous system","type":"exact"},{"name":"melanoma of CNS","type":"exact"},{"name":"melanoma of central nervous system","type":"exact"},{"name":"melanoma of the CNS","type":"exact"},{"name":"melanoma of the Central nervous system","type":"exact"},{"name":"primary CNS melanoma","type":"related"},{"name":"primary melanoma of the CNS","type":"related"},{"name":"primary meningeal melanoma","type":"related"}],"termid":"MONDO:0016747","xrefs":{"Monarch":{"xref_id":"0016747"}}}


id: PBO:0074509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A1","termid":"PBO:0074509"}


id: GO:1905325
data:
  {"annotated_genes":["SJAG_04259","SJAG_03327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100520],"is_not":false,"summary":null,"term":"GO:1905325"},{"annotations":[112916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the meiosis I spindle assembly checkpoint.","definition_xrefs":["PMID:26483559","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiosis I","termid":"GO:0060631"},{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"regulates","term_name":"meiosis I spindle assembly checkpoint signaling","termid":"GO:1905318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052","GO:0140013"],"is_obsolete":false,"name":"regulation of meiosis I spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905325","terms_by_termid":{"GO:1905325":null,"GO:1905326":null}}


id: FYPO:0000059
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic 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cellular process phenotype in which a cell does not proceed normally through a mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00871":null,"SJAG_01143":null,"SJAG_01330":null,"SJAG_01956":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03351":null,"SJAG_03449":null,"SJAG_03575":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null,"SJAG_04522":null},"genotype_count":21,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) 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type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_00871","SJAG_02392","SJAG_00118","SJAG_03596","SJAG_04280","SJAG_04522","SJAG_04464"],"name":"abnormal mitotic cell cycle","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_02392","SJAG_01143","SJAG_01330","SJAG_03596","SJAG_04284","SJAG_03575","SJAG_03449","SJAG_04522","SJAG_04464","SJAG_01956","SJAG_02592","SJAG_03351","SJAG_00118"],"single_locus_genotype_uniquenames":["mad2delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","pom1delta","nup61delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","sty1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta","mid2delta"],"synonyms":[{"name":"mitotic cell cycle defects","type":"exact"},{"name":"mitotic cell cycle: abnormal","type":"related"}],"termid":"FYPO:0000059","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003738":null,"FYPO:0004318":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in T cells.","definition_xrefs":["GOC:jal","ISBN:0781735149","PMID:16551263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell tolerance induction","synonyms":[{"name":"T lymphocyte tolerance induction","type":"exact"},{"name":"T-cell tolerance induction","type":"exact"},{"name":"T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002517"}


id: GO:0039585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with activation and autophosphorylation of PKR (also known as EIF2AK2), which phosphorylates proteins including the translation initiation factor eIF2 to inhibit translation. PKR is activated by stress signals and during the antiviral response, activated by binding to viral double-stranded RNA (dsRNA) leading to inhibition of protein synthesis during viral infection.","definition_xrefs":["PMID:9843495","VZ:1576","PMID:27629041","PMID:22102852","PMID:21204021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"PKR/eIFalpha signaling","synonyms":[{"name":"EIF2AK2 signal transduction","type":"exact"},{"name":"EIF2AK2/PRK signaling","type":"exact"},{"name":"PKR signal transduction","type":"exact"},{"name":"PKR signaling pathway","type":"exact"},{"name":"signaling through PKR","type":"exact"}],"termid":"GO:0039585"}


id: GO:0032410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of a transporter.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transporter activity","termid":"GO:0032409"},{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of transporter activity","synonyms":[{"name":"down regulation of transporter activity","type":"exact"},{"name":"down-regulation of transporter activity","type":"exact"},{"name":"downregulation of transporter activity","type":"exact"},{"name":"inhibition of transporter activity","type":"narrow"}],"termid":"GO:0032410"}


id: GO:0033852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 3,5,3'-triiodo-L-thyronine = 3,5,3'-triiodothyropyruvate + L-glutamate.","definition_xrefs":["RHEA:19133","EC:2.6.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"thyroid-hormone transaminase activity","secondary_identifiers":["MetaCyc:THYROID-HORMONE-AMINOTRANSFERASE-RXN","KEGG_REACTION:R03952"],"synonyms":[{"name":"3,5-dinitrotyrosine aminotransferase activity","type":"related"},{"name":"3,5-dinitrotyrosine transaminase activity","type":"related"},{"name":"L-3,5,3'-triiodothyronine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"thyroid hormone aminotransferase activity","type":"related"},{"name":"thyroid-hormone aminotransferase activity","type":"related"}],"termid":"GO:0033852"}


id: GO:0043073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of a germ cell, a reproductive cell in multicellular organisms.","definition_xrefs":["CL:0000586","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"germ cell nucleus","synonyms":[{"name":"germ-cell nucleus","type":"exact"}],"termid":"GO:0043073"}


id: PBO:0017561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5","termid":"PBO:0017561"}


id: GO:0103093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(7'-methylthio)heptylmalate = H+ + 2-oxo-10-methylthiodecanoate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthioalkylmalate dehydrogenase activity (obsolete GO:0103093)","termid":"GO:0103093"}


id: PBO:0113388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; overlaps tRNA-Thr/YNCP0016W","termid":"PBO:0113388"}


id: MONDO:0017590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the ampulla of Vater. The vast majority of cases are adenocarcinomas. Signs and symptoms include jaundice, abdominal pain, anorexia, nausea, vomiting, and weight loss.","definition_xrefs":["NCIT:C3908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ampulla of vater cancer","termid":"MONDO:0000919"},{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"},{"relation_name":"is_a","term_name":"carcinoma of duodenum","termid":"MONDO:0021335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of the ampulla of vater","secondary_identifiers":["EFO:1000079","ONCOTREE:AMPCA","UMLS:C0262401","MEDGEN:120461","MedDRA:10048853","Orphanet:300557","SCTID:254609000","icd11.foundation:267067189","GARD:21237","DOID:4932"],"synonyms":[{"name":"AMPCA","type":"related"},{"name":"Ampulloma","type":"exact"},{"name":"ampulla of Vater cancer","type":"exact"},{"name":"ampulla of Vater carcinoma","type":"exact"},{"name":"ampullary cancer","type":"exact"},{"name":"ampullary carcinoma","type":"exact"},{"name":"carcinoma of ampulla of vater","type":"exact"},{"name":"carcinoma of hepatopancreatic ampulla","type":"exact"},{"name":"hepatopancreatic ampulla carcinoma","type":"exact"}],"termid":"MONDO:0017590","xrefs":{"Monarch":{"xref_id":"0017590"}}}


id: PBO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2009 protein","termid":"PBO:0001525"}


id: PR:Q9HE10
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSC E3 ubiquitin ligase complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.02","synonyms":[{"name":"Spom972h-dsc3","type":"exact"},{"name":"defective for SREBP cleavage protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE10"}


id: PBO:0005427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Rgf3","termid":"PBO:0005427"}


id: FYPO:0001675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"increased alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0001675"}


id: MONDO:0019704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","secondary_identifiers":["Orphanet:93446"],"synonyms":[{"name":"primary osteodysplasia with decreased bone density","type":"exact"},{"name":"primary skeletal dysplasia with decreased bone density","type":"exact"}],"termid":"MONDO:0019704","xrefs":{"Monarch":{"xref_id":"0019704"}}}


id: GO:0150062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synaptic pruning mediated by complement system signaling.","definition_xrefs":["PMID:22632727","GOC:aruk","GOC:bc","PMID:18083105","PMID:29844190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement-mediated synapse pruning","synonyms":[{"name":"complement-dependent synapse pruning","type":"exact"},{"name":"synapse clearance","type":"broad"},{"name":"synapse disassembly","type":"broad"},{"name":"synapse elimination","type":"broad"},{"name":"synapse removal","type":"broad"}],"termid":"GO:0150062"}


id: GO:0016906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a sterol = UDP + an O-glucosylsterol.","definition_xrefs":["EC:2.4.1.173","RHEA:22724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"sterol 3-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:STEROL-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose-sterol beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-sterol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:sterol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:sterol glucosyltransferase activity","type":"exact"},{"name":"UDPG-SGTase activity","type":"related"},{"name":"UDPG:sterol glucosyltransferase activity","type":"exact"},{"name":"UDPglucose:sterol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"sterol 3beta-glucosyltransferase activity","type":"related"},{"name":"sterol glucosyltransferase activity","type":"exact"},{"name":"sterol-beta-D-glucosyltransferase activity","type":"related"},{"name":"sterol:UDPG glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-poriferasterol glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-sterol glucosyltransferase activity","type":"related"}],"termid":"GO:0016906"}


id: MONDO:0013840
data:
  {"annotated_genes":["SJAG_01866"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85523],"is_not":false,"summary":null,"term":"MONDO:0013840"}]},"cv_name":"mondo","definition":"Encephalopathy-hypertrophic cardiomyopathy-renal tubular disease syndrome is a rare mitochondrial disease due to a defect in coenzyme Q10 biosynthesis that manifests with a broad spectrum of signs and symptoms which may include: neonatal lactic acidosis, global developmental delay, tonus disorder, seizures, reduced spontaneous movements, ventricular hypertrophy, bradycardia, renal tubular dysfunction with massive lactic acid excretion in urine, severe biochemical defect of respiratory chain complexes II/III when assayed together and deficiency of coenzyme Q10 in skeletal muscle. Cerebral and cerebellar atrophy can be seen on magnetic resonance imaging and multiple choroid plexus cysts and symmetrical hyperechoic signal alterations in basal ganglia have been observed on ultrasound.","definition_xrefs":["Orphanet:319678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"encephalopathy-hypertrophic cardiomyopathy-renal tubular disease syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17470","MEDGEN:766288","OMIM:614654","DOID:0070242","UMLS:C3553374"],"synonyms":[{"name":"COQ10D5","type":"related"},{"name":"coenzyme Q10 deficiency, primary, 5","type":"related"},{"name":"coenzyme Q10 deficiency, primary, type 5","type":"exact"}],"termid":"MONDO:0013840","terms_by_termid":{"MONDO:0013840":null},"xrefs":{"Monarch":{"xref_id":"0013840"}}}


id: MONDO:0060729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal erythropoietic protoporphyria","termid":"MONDO:0019263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0019142","MONDO:0002515","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"protoporphyria, erythropoietic, 2","secondary_identifiers":["MEDGEN:1645733","UMLS:C4693947","OMIM:618015"],"synonyms":[{"name":"EPP2","type":"related"},{"name":"protoporphyria, erythropoietic, 2","type":"exact"}],"termid":"MONDO:0060729","xrefs":{"Monarch":{"xref_id":"0060729"}}}


id: MONDO:0040673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that affects the peritoneum.","definition_xrefs":["NCIT:C136410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneum cancer","termid":"MONDO:0002087"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant peritoneal germ cell tumor","secondary_identifiers":["MEDGEN:1612836","UMLS:C4526657"],"synonyms":[{"name":"malignant peritoneal germ cell tumor","type":"exact"}],"termid":"MONDO:0040673","xrefs":{"Monarch":{"xref_id":"0040673"}}}


id: GO:0099061
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic density membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic density membrane (obsolete GO:0099061)","termid":"GO:0099061"}


id: PBO:0059728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 2","termid":"PBO:0059728"}


id: MONDO:0025381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of transmissible viral diseases of chickens and turkeys. Liver tumors are found in most forms, but tumors can be found elsewhere.","definition_xrefs":["MESH:D001353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avian leukosis","synonyms":[{"name":"Avian Leukoses","type":"related"},{"name":"leukoses, Avian","type":"related"},{"name":"leukosis, Avian","type":"related"},{"name":"lymphoid leukosis","type":"exact"}],"termid":"MONDO:0025381","xrefs":{"Monarch":{"xref_id":"0025381"}}}


id: PBO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1242 family protein, secretory pathway component Ksh1 (predicted)","termid":"PBO:0003342"}


id: GO:0004808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminomethyl-2-thiouridine34 in tRNA + S-adenosyl-L-methionine = 5-methylaminomethyl-2-thiouridine34 in tRNA + H+ + S-adenosyl-L-homocysteine. This enzyme specifically adds the terminal methyl group of 5-[(methylamino)methyl]-2-thiouridylate.","definition_xrefs":["RHEA:19569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0016741","GO:0140101","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00601","MetaCyc:RXN0-5144","GO:0016425","EC:2.1.1.61"],"synonyms":[{"name":"tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity","type":"exact"},{"name":"tRNA 5-methylaminomethyl-2-thiouridylate 5'-methyltransferase activity","type":"related"}],"termid":"GO:0004808"}


id: PBO:0091910
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD Finger protein","termid":"PBO:0091910"}


id: PBO:0063005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b regulatory subunit 1 pseudogene 2","termid":"PBO:0063005"}


id: PBO:0049388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 1","termid":"PBO:0049388"}


id: PBO:0026921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K5_acetylation","termid":"PBO:0026921"}


id: PBO:0028991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proline_import","termid":"PBO:0028991"}


id: GO:0047333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dihydrostreptomycin 6-phosphate = ADP + dihydrostreptomycin 3'alpha,6-bisphosphate + 2 H+.","definition_xrefs":["EC:2.7.1.88","RHEA:16281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"dihydrostreptomycin-6-phosphate 3'-alpha-kinase activity","secondary_identifiers":["KEGG_REACTION:R03395","MetaCyc:2.7.1.88-RXN"],"synonyms":[{"name":"ATP:dihydrostreptomycin-6-P 3'alpha-phosphotransferase activity","type":"related"},{"name":"ATP:dihydrostreptomycin-6-phosphate 3'alpha-phosphotransferase activity","type":"related"},{"name":"dihydrostreptomycin 6-phosphate kinase (phosphorylating)","type":"related"},{"name":"dihydrostreptomycin-6-phosphate 3'alpha-kinase activity","type":"related"}],"termid":"GO:0047333"}


id: MONDO:0800320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration","termid":"MONDO:0004580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone dystrophy 1, X-linked","secondary_identifiers":["UMLS:C1844777","MEDGEN:336778"],"synonyms":[{"name":"COD1","type":"exact"}],"termid":"MONDO:0800320","xrefs":{"Monarch":{"xref_id":"0800320"}}}


id: GO:0035523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K29-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 29 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K29-linked deubiquitination","synonyms":[{"name":"protein K29-linked deubiquitinylation","type":"exact"},{"name":"protein K29-linked deubiquitylation","type":"exact"}],"termid":"GO:0035523"}


id: MOD:01678
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively coverts L-lysine to N6-carbamoyl-L-lysine.","definition_xrefs":["DeltaMass:56","PubMed:10978403","Unimod:5#K","OMSSA:31","PubMed:12203680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbamoylated residue","termid":"MOD:00398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-carbamoyl-L-lysine","synonyms":[{"name":"2-amino-6-ureido-hexanoic acid","type":"exact"},{"name":"Carbamyl","type":"related"},{"name":"Carbamylation","type":"related"},{"name":"N6-(aminocarbonyl)-L-lysine","type":"exact"},{"name":"N6CbmLys","type":"exact"},{"name":"carbamylk","type":"exact"},{"name":"homocitrulline","type":"exact"}],"termid":"MOD:01678"}


id: GO:0038027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by apolipoprotein A-I binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:16443932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:0038027"}


id: MONDO:0002826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tuberculosis (obsolete MONDO:0002826)","termid":"MONDO:0002826","xrefs":{"Monarch":{"xref_id":"0002826"}}}


id: GO:0016445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of immunoglobulins.","definition_xrefs":["GOC:ma","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"part_of","term_name":"immunoglobulin production","termid":"GO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"somatic diversification of immunoglobulins","synonyms":[{"name":"somatic diversification of antibodies","type":"exact"}],"termid":"GO:0016445"}


id: PATO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000670 saccharin versus water value (obsolete PATO:0000670)","termid":"PATO:0000670"}


id: MONDO:0018373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrotic changes in the bone tissue due to interruption of blood supply. Most often affecting the epiphysis of the long bones, the necrotic changes result in the collapse and the destruction of the bone structure.","definition_xrefs":["NCIT:C34841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avascular necrosis","secondary_identifiers":["GARD:21658","UMLS:C0027543","Orphanet:399164","MEDGEN:10200","SCTID:397758007"],"synonyms":[{"name":"AVN","type":"exact"},{"name":"avascular necrosis of bone","type":"exact"}],"termid":"MONDO:0018373","xrefs":{"Monarch":{"xref_id":"0018373"}}}


id: PBO:0053245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 1","termid":"PBO:0053245"}


id: PBO:0051403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 3, pseudogene","termid":"PBO:0051403"}


id: GO:2000830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of parathyroid hormone secretion","termid":"GO:2000828"},{"relation_name":"positively_regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of parathyroid hormone secretion","synonyms":[{"name":"positive regulation of PTH secretion","type":"exact"},{"name":"positive regulation of parathormone secretion","type":"exact"},{"name":"positive regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000830"}


id: MONDO:0017955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete granulomatous autoinflammatory syndrome (obsolete MONDO:0017955)","secondary_identifiers":["Orphanet:324930"],"termid":"MONDO:0017955","xrefs":{"Monarch":{"xref_id":"0017955"}}}


id: PBO:0068511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 101, pseudogene","termid":"PBO:0068511"}


id: MONDO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrofrontofacionasal dysostosis (obsolete MONDO:0000717)","termid":"MONDO:0000717","xrefs":{"Monarch":{"xref_id":"0000717"}}}


id: FYPO:0000177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the mitotic spindle is abnormal. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"abnormal spindle assembly","termid":"FYPO:0000119"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000337","FYPO:0001320","FYPO:0000641","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle assembly","secondary_identifiers":["FYPO:0001349"],"synonyms":[{"name":"abnormal bipolar spindle formation","type":"exact"},{"name":"abnormal mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"abnormal spindle assembly during mitotic cell cycle","type":"related"},{"name":"abnormal spindle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000177"}


id: GO:1905327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the tracheoesophageal septum. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["PMID:9731532","GOC:TermGenie","GO_REF:0000081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheoesophageal septum formation","synonyms":[{"name":"esophagotracheal septum formation","type":"exact"},{"name":"tracheoesophageal ridges formation","type":"related"}],"termid":"GO:1905327"}


id: GO:0042989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of actin monomers (obsolete GO:0042989)","synonyms":[{"name":"actin monomer retention","type":"exact"},{"name":"actin monomer sequestering","type":"exact"},{"name":"actin monomer sequestering activity","type":"related"},{"name":"actin monomer sequestration","type":"exact"},{"name":"actin monomer storage","type":"exact"},{"name":"retention of actin monomers","type":"exact"},{"name":"sequestration of actin monomers","type":"exact"},{"name":"storage of actin monomers","type":"exact"}],"termid":"GO:0042989"}


id: MONDO:0009877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laron syndrome is a congenital disorder characterized by marked short stature associated with normal or high serum growth hormone (GH) and low serum insulin-like growth factor-1 (IGF-I) levels which fail to rise after exogenous GH administration.","definition_xrefs":["Orphanet:633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Laron syndrome","secondary_identifiers":["GARD:6859","UMLS:C0271568","OMIM:262500","DOID:9521","NORD:1209","MEDGEN:78776","NCIT:C130994","SCTID:38196001","MESH:D046150"],"synonyms":[{"name":"GH receptor deficiency","type":"exact"},{"name":"Growth Hormone Insensitivity","type":"exact"},{"name":"Growth hormone receptor deficiency","type":"exact"},{"name":"Laron dwarfism","type":"related"},{"name":"Laron syndrome","type":"exact"},{"name":"Laron type pituitary dwarfism I","type":"related"},{"name":"Laron-type dwarfism","type":"exact"},{"name":"Laron-type isolated somatotropin defect","type":"exact"},{"name":"complete growth hormone insensitivity","type":"exact"},{"name":"growth hormone insensitivity syndrome","type":"related"},{"name":"pituitary dwarfism 2","type":"related"},{"name":"pituitary dwarfism II","type":"related"},{"name":"primary GH insensitivity","type":"exact"},{"name":"primary GH resistance","type":"exact"},{"name":"primary growth hormone insensitivity","type":"exact"},{"name":"primary growth hormone resistance","type":"exact"},{"name":"short stature due to growth hormone resistance","type":"exact"}],"termid":"MONDO:0009877","xrefs":{"Monarch":{"xref_id":"0009877"}}}


id: PBO:0028476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mannose-specific_cell-cell_adhesion","termid":"PBO:0028476"}


id: PBO:0081684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 606","termid":"PBO:0081684"}


id: GO:1902318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in nuclear cell cycle DNA replication (obsolete GO:1902318)","synonyms":[{"name":"DNA replication, synthesis of RNA primer involved in DNA replication during S phase","type":"related"},{"name":"DNA replication, synthesis of RNA primer involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA replication, synthesis of RNA primer involved in DNA replication involved in S-phase","type":"exact"},{"name":"replication priming involved in DNA replication during S phase","type":"related"},{"name":"replication priming involved in DNA replication involved in S phase","type":"related"},{"name":"replication priming involved in DNA replication involved in S-phase","type":"related"},{"name":"replication priming involved in nuclear cell cycle DNA replication","type":"related"}],"termid":"GO:1902318"}


id: PBO:0011980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rad57/Rhp57","termid":"PBO:0011980"}


id: GO:0031429
data:
  {"annotated_genes":["SJAG_00566","SJAG_01234","SJAG_00083","SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89214,94545,100347,105447],"is_not":false,"summary":null,"term":"GO:0031429"}]},"cv_name":"cellular_component","definition":"A box H/ACA small nucleolar ribonucleoprotein complex located in the nucleolus that catalyzes pseudouridylation of ribosomal RNA residues. The complex is composed of four different core proteins that assemble onto a H/ACA guide RNA scaffold that identifies specific uridines in rRNA for modification during ribosome synthesis.","definition_xrefs":["PMID:17284456","PMID:22065625","PMID:20227365","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005730","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"box H/ACA snoRNP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA small nucleolar ribonucleoprotein complex","type":"exact"},{"name":"box H/ACA snoRNP pseudouridylase complex","type":"exact"}],"termid":"GO:0031429","terms_by_termid":{"GO:0031429":null}}


id: PBO:0067048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 68, pseudogene","termid":"PBO:0067048"}


id: GO:0043182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting sodium ions into, and confining within, a vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar sequestering","termid":"GO:0043181"},{"relation_name":"part_of","term_name":"intracellular sodium ion homeostasis","termid":"GO:0006883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0098771","GO:0008150"],"is_obsolete":false,"name":"vacuolar sequestering of sodium ion","synonyms":[{"name":"sequestering of sodium ion (Na+) in vacuole","type":"exact"},{"name":"sequestration of sodium ion (Na+) in vacuole","type":"exact"},{"name":"sodium ion (Na+) retention in vacuole","type":"exact"},{"name":"sodium ion (Na+) storage in vacuole","type":"exact"},{"name":"vacuolar sequestering of sodium ion (Na+)","type":"exact"},{"name":"vacuolar sequestration of sodium ion (Na+)","type":"exact"},{"name":"vacuolar sodium ion (Na+) retention","type":"exact"},{"name":"vacuolar sodium ion (Na+) storage","type":"exact"}],"termid":"GO:0043182"}


id: PBO:0043803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 3","termid":"PBO:0043803"}


id: GO:0010696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the process involving the release of duplicated mitotic spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane.","definition_xrefs":["GOC:tb","GOC:dph","PMID:18500339","PMID:16792804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle pole body separation","termid":"GO:0010695"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"initial mitotic spindle pole body separation","termid":"GO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic spindle pole body separation","synonyms":[{"name":"positive regulation of SPB separation","type":"exact"}],"termid":"GO:0010696"}


id: MONDO:0010945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the CA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 17","secondary_identifiers":["ICD10CM:H35.5","OMIM:600852","UMLS:C1833245","DOID:0110404","GARD:10387","MEDGEN:322153","MESH:C563437"],"synonyms":[{"name":"CA4 retinitis pigmentosa","type":"exact"},{"name":"RP 17","type":"related"},{"name":"RP17","type":"exact"},{"name":"retinitis pigmentosa 17","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in CA4","type":"exact"},{"name":"retinitis pigmentosa type 17","type":"exact"}],"termid":"MONDO:0010945","xrefs":{"Monarch":{"xref_id":"0010945"}}}


id: PBO:0075322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 2","termid":"PBO:0075322"}


id: GO:0031215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The precipitation of calcium carbonate onto the organic matrix of a shell, such as a mollusc shell.","definition_xrefs":["GOC:mah","PMID:15132736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shell calcification","termid":"GO:0031215"}


id: GO:0060821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by a mechanism of DNA methylation.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of X chromosome by DNA methylation (obsolete GO:0060821)","termid":"GO:0060821"}


id: PATO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000745 behavioral quality value (obsolete PATO:0000745)","termid":"PATO:0000745"}


id: PATO:0002136
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's relative inability of electromagnetism to pass through a particular material, particularly X-rays.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiopacity","termid":"PATO:0002136"}


id: PBO:0066803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 102","termid":"PBO:0066803"}


id: MONDO:0004113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete HCL-v (obsolete MONDO:0004113)","termid":"MONDO:0004113","xrefs":{"Monarch":{"xref_id":"0004113"}}}


id: GO:0010224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 280 to 315 nm.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to UV-B","synonyms":[{"name":"response to UV-B light stimulus","type":"exact"},{"name":"response to UV-B radiation stimulus","type":"exact"},{"name":"response to UVB light stimulus","type":"exact"},{"name":"response to UVB radiation stimulus","type":"exact"},{"name":"response to medium wave ultraviolet light stimulus","type":"exact"},{"name":"response to medium wave ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0010224"}


id: PBO:0090555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex regulatory subunit Nat1","termid":"PBO:0090555"}


id: PBO:0072053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 23","termid":"PBO:0072053"}


id: PBO:0064415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 8B","termid":"PBO:0064415"}


id: PBO:0029044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_arsenate","termid":"PBO:0029044"}


id: GO:0010946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic joint molecule formation. Meiotic joint molecule formation is the conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic joint molecule formation","termid":"GO:0000709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of meiotic joint molecule formation","termid":"GO:0010946"}


id: FYECO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing non-fermentable carbon sources. Please note that more specific terms exist, such as glycerol and ethanol rich medium that can be used if this is known.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-fermentable carbon sources medium","termid":"FYECO:0000213"}


id: GO:0120110
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115801],"is_not":false,"summary":null,"term":"GO:0120110"}]},"cv_name":"biological_process","definition":"The process whereby the mitotic telomeres are gathered together during, or prior to, attachment to the nuclear envelope.","definition_xrefs":["PMID:25778919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"},{"relation_name":"part_of","term_name":"mitotic telomere clustering and tethering at nuclear periphery","termid":"GO:0120109"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"interphase mitotic telomere clustering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic telomere clustering during interphase","type":"exact"}],"termid":"GO:0120110","terms_by_termid":{"GO:0120110":null}}


id: GO:1904836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an acoustico-facial VII-VIII ganglion complex is generated and organized.","definition_xrefs":["PMID:18356247","GOC:mat","GOC:PARL","GOC:TermGenie","GOC:bf","GO_REF:0000083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion morphogenesis","termid":"GO:0061559"},{"relation_name":"part_of","term_name":"facioacoustic ganglion development","termid":"GO:1903375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facioacoustic ganglion morphogenesis","synonyms":[{"name":"acoustico-facial VII-VIII ganglion complex morphogenesis","type":"exact"},{"name":"acousticofacial ganglion morphogenesis","type":"exact"},{"name":"facio-acoustic VII-VIII ganglion complex morphogenesis","type":"related"},{"name":"facio-acoustic ganglion complex VII-VIII morphogenesis","type":"exact"},{"name":"facio-acoustic ganglion complex morphogenesis","type":"related"},{"name":"facio-acoustic ganglion morphogenesis","type":"exact"}],"termid":"GO:1904836"}


id: MONDO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of maxillary sinusitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maxillary sinusitis","termid":"MONDO:0005842"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute maxillary sinusitis","secondary_identifiers":["ICD9:461.0","ICD10CM:J01.0","icd11.foundation:1617309258","UMLS:C0155804","MEDGEN:510086","SCTID:68272006","DOID:2050"],"synonyms":[{"name":"acute antritis","type":"exact"},{"name":"maxillary sinusitis, acute","type":"exact"}],"termid":"MONDO:0002186","xrefs":{"Monarch":{"xref_id":"0002186"}}}


id: MONDO:0800143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cytomegalovirus pneumonia due to variant in the NOS2 gene.","definition_xrefs":["PMID:31995689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytomegalovirus pneumonia","termid":"MONDO:0024354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytomegalovirus pneumonia due to NOS2 deficiency","termid":"MONDO:0800143","xrefs":{"Monarch":{"xref_id":"0800143"}}}


id: SO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where a deletion fuses genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_fusion","synonyms":[{"name":"feature fusion","type":"exact"}],"termid":"SO:0001882"}


id: PBO:0053629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 674","termid":"PBO:0053629"}


id: PBO:0065733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 4","termid":"PBO:0065733"}


id: PBO:0053639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 686","termid":"PBO:0053639"}


id: PBO:0029603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transporter_activity","termid":"PBO:0029603"}


id: PBO:0062231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 10 pseudogene","termid":"PBO:0062231"}


id: GO:1902311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["PMID:21489137","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of copper ion transmembrane transport","synonyms":[{"name":"regulation of copper cation transmembrane transport","type":"exact"},{"name":"regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902311"}


id: FYPO:0005624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ultraviolet light during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:26652183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to UV during vegetative growth","termid":"FYPO:0000268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to UV during mitotic S phase","synonyms":[{"name":"decreased growth during cellular response to UV during mitotic S phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to UV during mitotic S phase","type":"exact"},{"name":"hypersensitive to UV during mitotic S phase","type":"exact"},{"name":"increased sensitivity to UV irradiation during mitotic S phase","type":"exact"},{"name":"sensitive to UV during S phase during vegetative growth","type":"exact"},{"name":"sensitive to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ultraviolet light during mitotic S phase","type":"exact"}],"termid":"FYPO:0005624"}


id: MONDO:0005810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by an increase in mononuclear white blood cells and swollen lymph nodes, which is usually caused by infection with the Epstein-Barr virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus infection","termid":"MONDO:0005111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious mononucleosis","secondary_identifiers":["icd11.foundation:760139952","DOID:8568","ICD9:075","MESH:D007244","NANDO:2200976","NCIT:C34726","MEDGEN:7069","UMLS:C0021345","SCTID:186668002","NANDO:1200668","EFO:0007326"],"synonyms":[{"name":"Filatov's disease","type":"exact"},{"name":"Gammaherpesviral mononucleosis","type":"exact"},{"name":"Mono","type":"exact"},{"name":"Pfeiffer's disease","type":"exact"},{"name":"glandular fever","type":"exact"},{"name":"monocytic angina","type":"exact"},{"name":"mononucleosis","type":"exact"}],"termid":"MONDO:0005810","xrefs":{"Monarch":{"xref_id":"0005810"}}}


id: GO:0051508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + stigmasterol = UDP + O-glucosyl-stigmasterol.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete stigmasterol UDP-glucosyltransferase activity (obsolete GO:0051508)","termid":"GO:0051508"}


id: SO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An snRNA required for the splicing of the minor U12-dependent class of eukaryotic nuclear introns. It forms a base paired complex with U6atac_snRNA (SO:0000397).","definition_xrefs":["PMID:12409455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4atac_snRNA","synonyms":[{"name":"U4atac small nuclear RNA","type":"exact"},{"name":"U4atac snRNA","type":"exact"},{"name":"small nuclear RNA U4atac","type":"exact"},{"name":"snRNA U4atac","type":"exact"}],"termid":"SO:0000394"}


id: PBO:0040488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATXN7L3 antisense RNA 1","termid":"PBO:0040488"}


id: PBO:0089700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prevacuole/endosomal FYVE tethering component Pep7","termid":"PBO:0089700"}


id: CHEBI:48607
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A metal chloride salt with a Li(+) counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lithium chloride","termid":"CHEBI:48607"}


id: MONDO:1010628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chediak-Higashi syndrome that occurs in Arctic fox.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chediak-Higashi syndrome, non-human animal","termid":"MONDO:1010070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome, Arctic fox","secondary_identifiers":["OMIA:000185-494514"],"termid":"MONDO:1010628","xrefs":{"Monarch":{"xref_id":"1010628"}}}


id: MONDO:0003257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low-grade neoplasm that arises from the neurohypophysis. It includes the granular cell tumor of the neurohypophysis and pituicytoma.","definition_xrefs":["NCIT:C7157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"neuroendocrine disorder","termid":"MONDO:0100070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior pituitary gland neoplasm","secondary_identifiers":["DOID:5048","UMLS:C1334957","MEDGEN:235368"],"synonyms":[{"name":"Neurohypophysis neoplasm","type":"exact"},{"name":"Neurohypophysis tumor","type":"exact"},{"name":"Neurohypophysis tumour","type":"exact"},{"name":"PITUICYTOMA, benign","type":"exact"},{"name":"neoplasm of neurohypophysis","type":"exact"},{"name":"neurohypophysis neoplasm","type":"exact"},{"name":"neurohypophysis neoplasm (disease)","type":"exact"},{"name":"neurohypophysis tumor","type":"exact"},{"name":"neurohypophysis tumour","type":"exact"},{"name":"posterior pituitary gland neoplasm","type":"exact"},{"name":"posterior pituitary gland tumor","type":"exact"},{"name":"posterior pituitary gland tumour","type":"exact"},{"name":"posterior pituitary neoplasm","type":"exact"},{"name":"posterior pituitary tumor","type":"exact"},{"name":"posterior pituitary tumour","type":"exact"},{"name":"tumor of neurohypophysis","type":"exact"},{"name":"tumour of neurohypophysis","type":"exact"}],"termid":"MONDO:0003257","xrefs":{"Monarch":{"xref_id":"0003257"}}}


id: GO:0030388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose 1,6-bisphosphate, also known as FBP. The D enantiomer is a metabolic intermediate in glycolysis and gluconeogenesis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructose 1,6-bisphosphate metabolic process","synonyms":[{"name":"fructose 1,6-bisphosphate metabolism","type":"exact"}],"termid":"GO:0030388"}


id: PBO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicrotuBule Organizer","termid":"PBO:0005596"}


id: MONDO:0002931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival disorder","termid":"MONDO:0006170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctivochalasis","secondary_identifiers":["SCTID:408663001","UMLS:C0878693","icd11.foundation:870876723","ICD9:372.81","DOID:4250","MEDGEN:678824"],"termid":"MONDO:0002931","xrefs":{"Monarch":{"xref_id":"0002931"}}}


id: MONDO:0005517
data:
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id: MONDO:0011086
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id: MONDO:0037252
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id: GO:0051937
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id: PBO:0086649
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id: PBO:0068682
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id: GO:1990452
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id: GO:0051128
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id: MONDO:0009688
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id: PBO:0074503
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id: PBO:0080887
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id: GO:0140769
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id: MONDO:0017722
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id: PBO:0081036
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id: PBO:0035994
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id: MONDO:0014952
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id: MONDO:0100366
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id: PBO:0062314
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id: MONDO:0030087
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id: PBO:0058583
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id: PBO:0057544
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id: PBO:0079775
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id: GO:0035239
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id: PBO:0001582
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id: GO:0043178
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id: PBO:0056066
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id: MOD:00878
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id: PR:Q9UTC6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An iron-sulfur cluster assembly enzyme ISCU, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00204","PANTHER:PTHR10093:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron sulfur cluster assembly protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.13c","secondary_identifiers":["UniProtKB:Q9UTC6"],"synonyms":[{"name":"Spom972h-ISCU","type":"exact"},{"name":"iron sulfur cluster scaffold protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTC6"}


id: PBO:0073675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein delta","termid":"PBO:0073675"}


id: MONDO:0044033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or subacute reversible condition characterized by headaches, mental status changes, visual disturbances, and seizures associated with imaging findings of posterior leukoencephalopathy. It has been observed in association with hypertensive encephalopathy, eclampsia, and immunosuppressive and cytotoxic drug treatment.","definition_xrefs":["NCIT:C78598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hypertensive encephalopathy","termid":"MONDO:0006796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior leukoencephalopathy syndrome","secondary_identifiers":["SCTID:450886002","UMLS:C0878576","MEDGEN:163898","MESH:D054038"],"synonyms":[{"name":"PRES","type":"exact"},{"name":"Posterior reversible encephalopathy syndrome","type":"exact"},{"name":"RPLE","type":"exact"},{"name":"leukoencephalopathy syndrome, Posterior","type":"related"},{"name":"leukoencephalopathy syndromes, Posterior","type":"related"},{"name":"posterior reversible encephalopathy syndrome","type":"exact"},{"name":"reversible Posterior cerebral edema syndrome","type":"exact"},{"name":"reversible Posterior cerebral oedema syndrome","type":"exact"},{"name":"reversible Posterior leukoencephalopathy syndrome","type":"exact"},{"name":"reversible occipital parietal encephalopathy","type":"exact"},{"name":"reversible posterior leukoencephalopathy syndrome","type":"exact"},{"name":"syndrome, Posterior leukoencephalopathy","type":"related"},{"name":"syndromes, Posterior leukoencephalopathy","type":"related"}],"termid":"MONDO:0044033","xrefs":{"Monarch":{"xref_id":"0044033"}}}


id: MONDO:0800126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lung disorder characterized by ectopic bone formation within lung parenchyma. DPO can be idiopathic or associated with a variety of cardiovascular, respiratory diseases or other disorders. There are mainly two forms of DPO: nodular and dendriform.","definition_xrefs":["PMID:31245272","PMID:19958677","PMID:18664981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic pulmonary ossification","termid":"MONDO:0800126","xrefs":{"Monarch":{"xref_id":"0800126"}}}


id: PBO:0059363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A","termid":"PBO:0059363"}


id: PBO:0040423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1","termid":"PBO:0040423"}


id: GO:0018521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,6-dihydroxy-2-methylcyclohexa-2,4-dienecarboxylate + NAD+ = 3-methylcatechol + CO2 + NADH.","definition_xrefs":["EC:1.3.1.68","RHEA:15657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05314","MetaCyc:1.3.1.68-RXN","UM-BBD_reactionID:r0224"],"synonyms":[{"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0018521"}


id: PBO:0041395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 putative open reading frame 67","termid":"PBO:0041395"}


id: PR:Q09146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hba1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A resistance protein Hba1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.13c","synonyms":[{"name":"SPBC365.13c","type":"related"},{"name":"Spom972h-hba1","type":"exact"},{"name":"caf1","type":"related"},{"name":"caffeine resistance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09146"}


id: SO:1000170
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variant that has not been characterized.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized_chromosomal_mutation","synonyms":[{"name":"uncharacterized chromosomal mutation","type":"exact"}],"termid":"SO:1000170"}


id: PBO:0077855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 1","termid":"PBO:0077855"}


id: PBO:0080865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 6","termid":"PBO:0080865"}


id: PBO:0048884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 3, pseudogene","termid":"PBO:0048884"}


id: MONDO:0005669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial mycosis that is caused by Piedraia hortae and is manifested by a small firm black nodule involving the hair shaft.","direct_ancestors":[{"relation_name":"is_a","term_name":"piedra","termid":"MONDO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"black piedra","secondary_identifiers":["UMLS:C0153249","ICD9:111.3","ICD10CM:B36.3","icd11.foundation:1990974193","DOID:12711","MEDGEN:452132","SCTID:33666009"],"termid":"MONDO:0005669","xrefs":{"Monarch":{"xref_id":"0005669"}}}


id: MONDO:0044981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pseudoallergy","secondary_identifiers":["MEDGEN:783416","SCTID:609397002","ICD9:V15.09","UMLS:C3662262"],"synonyms":[{"name":"non-allergic hypersensitivity to substance","type":"exact"},{"name":"pseudoallergy to substance","type":"exact"}],"termid":"MONDO:0044981","xrefs":{"Monarch":{"xref_id":"0044981"}}}


id: FYPO:0002239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere length during vegetative growth","termid":"FYPO:0006464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"shortened telomeres during vegetative growth","synonyms":[{"name":"decreased telomere length during vegetative growth","type":"exact"},{"name":"reduced telomere length during vegetative growth","type":"exact"},{"name":"short telomeres during vegetative growth","type":"exact"},{"name":"shortened telomeres during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002239"}


id: PBO:0049161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 3","termid":"PBO:0049161"}


id: PBO:0057867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3178","termid":"PBO:0057867"}


id: PBO:0086675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RDN5-2; YLR154C-H has a paralog, YLR157C-C, that arose from a segmental duplication","termid":"PBO:0086675"}


id: GO:0120279
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small cytoplasmic, non-membranous RNA/protein complex aggregate in the primordial germ cells that are distinct from, but colocalize with or are adjacent to, P granules and mutator foci and are associated with RNA metabolism. Z granules have been observed in C. elegans.","definition_xrefs":["PMID:31378614","GOC:krc","GOC:dr","PMID:29769721","PMID:32650583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"},{"relation_name":"part_of","term_name":"germ plasm","termid":"GO:0060293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Z granule","synonyms":[{"name":"germline granule","type":"broad"}],"termid":"GO:0120279"}


id: MOD:00138
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 2-oxobutanoic acid.","definition_xrefs":["PubMed:2253617","PubMed:15023056","PubMed:1680314","PubMed:2764678","Unimod:385#T","RESID:AA0129","ChEBI:149508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxobutanoic acid","synonyms":[{"name":"2-ketobutyric acid","type":"exact"},{"name":"2-oxobutanoic acid","type":"exact"},{"name":"2-oxobutyric acid","type":"exact"},{"name":"Ammonia-loss","type":"related"},{"name":"Loss of ammonia","type":"related"},{"name":"MOD_RES 2-oxobutanoic acid","type":"exact"}],"termid":"MOD:00138"}


id: PBO:0056736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MET proto-oncogene, receptor tyrosine kinase","termid":"PBO:0056736"}


id: PBO:0043682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortistatin","termid":"PBO:0043682"}


id: PBO:0041871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium sensing receptor","termid":"PBO:0041871"}


id: GO:0015662
data:
  {"annotated_genes":["SJAG_01435","SJAG_03850","SJAG_02399","SJAG_04167","SJAG_04258","SJAG_01400","SJAG_01129","SJAG_03866","SJAG_01669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100208,114223],"is_not":false,"summary":null,"term":"GO:0015662"},{"annotations":[100818,107824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[107014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[107015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[111485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008556"},{"annotations":[111486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[112905,86916,86917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[111487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate.","definition_xrefs":["PMID:10600683","PMID:10322420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type transmembrane transporter activity","termid":"GO:0140358"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01129":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01669":null,"SJAG_02399":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04167":null,"SJAG_04258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"P-type ion transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism","type":"exact"},{"name":"P-type ATPase activity","type":"exact"},{"name":"ion transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"narrow"}],"termid":"GO:0015662","terms_by_termid":{"GO:0005388":null,"GO:0008553":null,"GO:0008554":null,"GO:0008556":null,"GO:0008900":null,"GO:0015662":null,"GO:0043682":null,"GO:0140581":null}}


id: PBO:0065421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMB7 pseudogene 1","termid":"PBO:0065421"}


id: PATO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency quality inhering in a bearer by virtue of the bearer's having efficiency.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efficiency","termid":"PATO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"efficient","termid":"PATO:0001678"}


id: GO:1905174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular smooth muscle cell dedifferentiation.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","GO_REF:0000058","PMID:19088079","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell dedifferentiation","termid":"GO:1990936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"regulation of vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1905174"}


id: PR:Q9USP6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clc1 gene.","definition_xrefs":["UniProtKB:Q9USP6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.08","synonyms":[{"name":"CLC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-clc1","type":"exact"}],"termid":"PR:Q9USP6"}


id: PBO:0114342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine family transmembrane transporter","termid":"PBO:0114342"}


id: GO:0031756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-3 sphingosine 1-phosphate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Edg-3 sphingosine 1-phosphate receptor binding","synonyms":[{"name":"Edg-3 sphingosine 1-phosphate receptor ligand","type":"narrow"}],"termid":"GO:0031756"}


id: PBO:0066509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX5 antisense RNA 1","termid":"PBO:0066509"}


id: GO:0036124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 trimethylation (obsolete GO:0036124)","termid":"GO:0036124"}


id: GO:0007149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete colony morphology (obsolete GO:0007149)","synonyms":[{"name":"colony morphology","type":"exact"}],"termid":"GO:0007149"}


id: MONDO:1011365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urinary system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary system disorder, non-human animal","termid":"MONDO:1011365","xrefs":{"Monarch":{"xref_id":"1011365"}}}


id: PBO:0055226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2652","termid":"PBO:0055226"}


id: PR:Q9P6P0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6P0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.06","synonyms":[{"name":"Spom972h-taf3","type":"exact"},{"name":"TBP-associated factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P0"}


id: GO:1903847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","PMID:22269326","GOC:rph","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aorta morphogenesis","termid":"GO:1903847"}


id: GO:0005667
data:
  {"annotated_genes":["SJAG_01475","SJAG_05331","SJAG_03546","SJAG_04921","SJAG_00512","SJAG_00693","SJAG_02458","SJAG_00698","SJAG_04274","SJAG_02815","SJAG_04705","SJAG_03982","SJAG_03900","SJAG_05247","SJAG_04977","SJAG_00584","SJAG_00095","SJAG_03622","SJAG_04813","SJAG_04009","SJAG_04852","SJAG_00159","SJAG_03206","SJAG_01710","SJAG_02494","SJAG_04368","SJAG_00901","SJAG_01827","SJAG_00297","SJAG_02813","SJAG_00116","SJAG_00758","SJAG_00421","SJAG_00861","SJAG_00290","SJAG_04614","SJAG_01062","SJAG_00934","SJAG_02472","SJAG_03007","SJAG_03354","SJAG_04036","SJAG_01744","SJAG_02174","SJAG_04766","SJAG_01771","SJAG_02218","SJAG_00958","SJAG_02311","SJAG_03095","SJAG_00202","SJAG_02810","SJAG_03573","SJAG_03143","SJAG_00692","SJAG_02778","SJAG_00995","SJAG_00987","SJAG_00585","SJAG_00904","SJAG_02849","SJAG_03844","SJAG_03120","SJAG_00266","SJAG_05339","SJAG_00150","SJAG_03285","SJAG_01207","SJAG_02255","SJAG_01728","SJAG_00872","SJAG_00735","SJAG_04420","SJAG_04917","SJAG_02747","SJAG_04647","SJAG_04381","SJAG_01157","SJAG_01808","SJAG_04083","SJAG_02541","SJAG_00741","SJAG_04654","SJAG_04607","SJAG_05153","SJAG_03107","SJAG_03618"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88915,107610],"is_not":false,"summary":null,"term":"GO:0005667"},{"annotations":[91944,107121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990243"},{"annotations":[92908,103429,108839,111018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016602"},{"annotations":[118053,101138,102589,107872,105528,86667,113862,105395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070847"},{"annotations":[90457,98078,106157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160051"},{"annotations":[105269,103616,109863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097221"},{"annotations":[92490,105886,103131,108334,107383,111058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030907"},{"annotations":[107648,89871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017054"},{"annotations":[108299,108888,111071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070860"},{"annotations":[111072,94770,90560,108300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000120"},{"annotations":[104435,94598,115582,92371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000500"},{"annotations":[99680,89300,106208,107953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090575"},{"annotations":[111243,107313,91270,112422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[106834,116472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005672"},{"annotations":[95224,87812,95993,86599,87551,99407,113929,88488,114519,116692,93343,94771,113361,102791,92704,106057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005669"},{"annotations":[96806,114203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005673"},{"annotations":[114110,92705,101478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005674"},{"annotations":[89463,89093,91372,107634,102326,108130,114270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000439"},{"annotations":[105200,89464,113962,91373,102327,108131,107635,114271,89094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[94772,102244,115339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000126"},{"annotations":[111780,87398,108282,98772,114499,106083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000127"},{"annotations":[112100,111222,105201],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A 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id: GO:0046412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylmercury acetate, an organomercurial compound composed of a mercury atom attached to a benzene ring and an acetate group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organometal metabolic process","termid":"GO:0018942"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylmercury acetate metabolic process","synonyms":[{"name":"phenylmercury acetate metabolism","type":"exact"}],"termid":"GO:0046412"}


id: GO:0009732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a hexose is received and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"},{"relation_name":"is_a","term_name":"detection of monosaccharide stimulus","termid":"GO:0034287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hexose stimulus","synonyms":[{"name":"perception of hexose stimulus","type":"related"}],"termid":"GO:0009732"}


id: GO:1904758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a new growing cell tip.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:19431238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to growing cell tip","termid":"GO:1902486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to new growing cell tip","synonyms":[{"name":"protein localisation in new growing cell tip","type":"exact"},{"name":"protein localisation to new growing cell tip","type":"exact"},{"name":"protein localization in new growing cell tip","type":"exact"},{"name":"protein localization to new cell tip after activation of bipolar cell growth","type":"exact"},{"name":"protein localization to new growing cell end","type":"exact"},{"name":"protein localization to post-NETO new cell end","type":"exact"},{"name":"protein localization to post-NETO new cell tip","type":"exact"},{"name":"protein localization to post-new end take-off new cell tip","type":"exact"}],"termid":"GO:1904758"}


id: GO:0160113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure which joins the B10 protofilament of the B tubule to the A1 protofilament of the A tubule within an axonemal microtubule doublet.","definition_xrefs":["PMID:37295417","GOC:krc","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal microtubule doublet inner junction","termid":"GO:0160113"}


id: PBO:0045721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 5","termid":"PBO:0045721"}


id: GO:1904680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a peptide from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"peptide transmembrane transporter activity","secondary_identifiers":["GO:0015637","Reactome:R-HSA-1500817","GO:0015197"],"synonyms":[{"name":"peptide transporter activity","type":"related"},{"name":"peptide uptake permease activity","type":"related"}],"termid":"GO:1904680"}


id: MONDO:0007983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schmid metaphyseal chondrodysplasia is a rare disorder characterized by moderately short stature with short limbs, coxa vara, bowlegs and an abnormal gait.","definition_xrefs":["Orphanet:174"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaphyseal chondrodysplasia","termid":"MONDO:0000138"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Schmid metaphyseal chondrodysplasia","secondary_identifiers":["MEDGEN:78550","GARD:7029","MESH:C537352","OMIM:156500","SCTID:29248006","DOID:0080021","NORD:1444","UMLS:C0265289"],"synonyms":[{"name":"Japanese type spondylometaphyseal dysplasia","type":"exact"},{"name":"MCDS","type":"exact"},{"name":"Metaphyseal Chondrodysplasia, Schmid Type","type":"exact"},{"name":"Schmid type metaphyseal dysplasia","type":"exact"},{"name":"metaphyseal chondrodysplasia Schmid type","type":"exact"},{"name":"metaphyseal chondrodysplasia, Schmid type","type":"exact"},{"name":"spondylometaphyseal dysplasia, Japanese type","type":"exact"}],"termid":"MONDO:0007983","xrefs":{"Monarch":{"xref_id":"0007983"}}}


id: PBO:0026691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tamoxifen","termid":"PBO:0026691"}


id: PBO:0077551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM258 pseudogene 1","termid":"PBO:0077551"}


id: GO:0072229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric proximal convoluted tubule over time, from its formation to the mature structure. The metanephric proximal convoluted tubule is the most proximal portion of the metanephric proximal tubule and extends from the metanephric glomerular capsule to the metanephric proximal straight tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal convoluted tubule development","termid":"GO:0072019"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric proximal tubule development","termid":"GO:0072237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal convoluted tubule development","termid":"GO:0072229"}


id: PBO:0064246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 5","termid":"PBO:0064246"}


id: GO:0045750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of S phase of mitotic cell cycle activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of S phase of mitotic cell cycle (obsolete GO:0045750)","synonyms":[{"name":"activation of S phase of mitotic cell cycle","type":"narrow"},{"name":"positive regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"positive regulation of S-phase of mitotic cell cycle","type":"exact"},{"name":"stimulation of S phase of mitotic cell cycle","type":"narrow"},{"name":"up regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"up-regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"upregulation of S phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0045750"}


id: PBO:0078344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 10-1","termid":"PBO:0078344"}


id: RO:0002553
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a hyperparasite of y iff x is a parasite of a parasite of the target organism y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_host","termid":"RO:0002454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasite_of","synonyms":[{"name":"epiparasite of","type":"related"},{"name":"hyperparasitoid of","type":"related"}],"termid":"RO:0002553"}


id: MONDO:0017153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension (PAH) associated with HIV infection (PAH-HIV) is a form of PAH characterized by elevated pulmonary arterial resistance leading to right heart failure observed as a complication of HIV infection.","definition_xrefs":["Orphanet:275808"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with HIV infection (obsolete MONDO:0017153)","secondary_identifiers":["ICD9:416.8","SCTID:697904001"],"synonyms":[{"name":"PAH associated with HIV infaction","type":"exact"}],"termid":"MONDO:0017153","xrefs":{"Monarch":{"xref_id":"0017153"}}}


id: GO:0042596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response of an organism to a perceived external threat.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear response","secondary_identifiers":["GO:0001663"],"synonyms":[{"name":"physiological fear response","type":"exact"}],"termid":"GO:0042596"}


id: GO:0018641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline + O2 + 2 H+ + 2 e- = H2O + 5,6-dihydroxy-3-methyl-2-oxo-1,2-dihydroquinoline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline 6-monooxygenase activity (obsolete GO:0018641)","termid":"GO:0018641"}


id: PBO:0028039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_disassembly","termid":"PBO:0028039"}


id: PBO:0040487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7 like 3","termid":"PBO:0040487"}


id: PBO:0073819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 20","termid":"PBO:0073819"}


id: PBO:0039471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18A","termid":"PBO:0039471"}


id: GO:0046399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucuronate, the anion of glucuronic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucuronate biosynthetic process","synonyms":[{"name":"glucuronate anabolism","type":"exact"},{"name":"glucuronate biosynthesis","type":"exact"},{"name":"glucuronate formation","type":"exact"},{"name":"glucuronate synthesis","type":"exact"}],"termid":"GO:0046399"}


id: MONDO:0008351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pupil, egg-shaped (obsolete MONDO:0008351)","secondary_identifiers":["MESH:C566731","OMIM:178800"],"synonyms":[{"name":"egg shaped pupils","type":"related"},{"name":"ovoid pupils","type":"related"},{"name":"pupil, egg-shaped","type":"exact"}],"termid":"MONDO:0008351","xrefs":{"Monarch":{"xref_id":"0008351"}}}


id: PBO:0064936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase domain and WD repeat containing 1","termid":"PBO:0064936"}


id: MONDO:0010559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MASA syndrome (Mental retardation, Aphasia, Spastic paraplegia, Adducted thumbs) is a historical term used to describe a phenotype now considered to be part of the X-linked L1 clinical spectrum (L1 syndrome). MASA is characterized by mild to moderate intellectual deficit, delayed development of speech, hypotonia progressing to spasticity or spastic paraplegia, adducted thumbs, and mild to moderate distension of the cerebral ventricles.","definition_xrefs":["Orphanet:2466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"L1 syndrome","termid":"MONDO:0017140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"MASA syndrome","secondary_identifiers":["MEDGEN:162894","icd11.foundation:1973644723","NCIT:C129930","OMIM:303350","SCTID:716996008","GARD:6986","UMLS:C0795953","DOID:0060246"],"synonyms":[{"name":"CRASH syndrome","type":"related"},{"name":"CRASH syndrome, X-linked recessive","type":"related"},{"name":"Clasped thumb and intellectual disability","type":"related"},{"name":"Clasped thumb and mental retardation","type":"related"},{"name":"Gareis-Mason syndrome","type":"exact"},{"name":"MASA syndrome","type":"exact"},{"name":"X-linked complicated hereditary spastic paraplegia type 1","type":"exact"},{"name":"X-linked corpus callosum agenesis","type":"exact"},{"name":"X-linked spastic paraplegia 1","type":"exact"},{"name":"adducted thumb with intellectual disability","type":"related"},{"name":"adducted thumb with mental retardation","type":"related"},{"name":"hereditary spastic paraplegia 1","type":"exact"},{"name":"intellectual disability aphasia shuffling Gait adducted thumbs (MASA)","type":"related"},{"name":"intellectual disability, aphasia, shuffling Gait, and adducted thumbs","type":"related"},{"name":"intellectual disability-aphasia-shuffling gait-adducted thumbs syndrome","type":"exact"},{"name":"masa syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation aphasia shuffling Gait adducted thumbs (MASA)","type":"related"},{"name":"mental retardation, aphasia, shuffling Gait, and adducted thumbs","type":"related"},{"name":"spastic paraplegia 1","type":"related"},{"name":"spastic paraplegia 1, X-linked","type":"related"},{"name":"spastic paraplegia, X-linked","type":"exact"},{"name":"thumb congenital clasped with intellectual disability","type":"related"},{"name":"thumb congenital clasped with mental retardation","type":"related"},{"name":"thumb, congenital Clasped, with intellectual disability","type":"related"},{"name":"thumb, congenital Clasped, with mental retardation","type":"related"}],"termid":"MONDO:0010559","xrefs":{"Monarch":{"xref_id":"0010559"}}}


id: PBO:0004461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream activation factor complex subunit Acr1","termid":"PBO:0004461"}


id: PR:Q8TFF8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB8B6.05c gene.","definition_xrefs":["UniProtKB:Q8TFF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB8B6.05c","synonyms":[{"name":"L-asparagine amidohydrolase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBPB8B6.05c","type":"exact"}],"termid":"PR:Q8TFF8"}


id: PBO:0088589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit, TREX complex subunit Sus1","termid":"PBO:0088589"}


id: PBO:0043223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 2","termid":"PBO:0043223"}


id: PBO:0027818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_amino_acid_catabolism_gene_mRNA_during_vegetative_growth","termid":"PBO:0027818"}


id: PBO:0054625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2030","termid":"PBO:0054625"}


id: PBO:0054240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1622","termid":"PBO:0054240"}


id: PBO:0044894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 7","termid":"PBO:0044894"}


id: GO:0060894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a limb spinous cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell fate specification","termid":"GO:0009957"},{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"limb epidermis stratification","termid":"GO:0060888"},{"relation_name":"part_of","term_name":"limb spinous cell differentiation","termid":"GO:0060890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb spinous cell fate specification","termid":"GO:0060894"}


id: PBO:0085419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; exports copper; has broad substrate specificity and can transport many mono- and divalent cations; transports a variety of drugs and is required for resistance to quinidine, barban, cisplatin, and bleomycin; contributes to potassium homeostasis; expression is regulated by copper","termid":"PBO:0085419"}


id: MONDO:0016096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor other than dysgerminoma that arises from the ovary.","definition_xrefs":["NCIT:C102870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian primitive germ cell tumor","termid":"MONDO:0003408"},{"relation_name":"is_a","term_name":"nongerminomatous germ cell tumor","termid":"MONDO:0021656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant non-dysgerminomatous germ cell tumor of ovary","secondary_identifiers":["Orphanet:206538","GARD:20349","MEDGEN:1826164","UMLS:C5679783"],"synonyms":[{"name":"non-dysgerminomatous germ cell cancer of ovary","type":"exact"},{"name":"ovarian Nondysgerminomatous germ cell tumor","type":"exact"},{"name":"ovarian Nondysgerminomatous germ cell tumour","type":"exact"},{"name":"ovarian non-dysgerminomatous germ cell tumor","type":"exact"},{"name":"ovarian non-dysgerminomatous germ cell tumour","type":"exact"}],"termid":"MONDO:0016096","xrefs":{"Monarch":{"xref_id":"0016096"}}}


id: PBO:0057585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 890","termid":"PBO:0057585"}


id: GO:0000701
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94068],"is_not":false,"summary":null,"term":"GO:0000701"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of purines present in mismatches, especially opposite oxidized purines, by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic (AP) site.","definition_xrefs":["GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch base pair DNA N-glycosylase activity","termid":"GO:0000700"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0140097","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"purine-specific mismatch base pair DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.2.2.31"],"synonyms":[{"name":"A/G-specific adenine DNA glycosylase activity","type":"narrow"}],"termid":"GO:0000701","terms_by_termid":{"GO:0000701":null}}


id: GO:0071715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of icosanoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Icosanoids are unsaturated C20 fatty acids and skeletally related compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"icosanoid transport","synonyms":[{"name":"eicosanoid transport","type":"exact"}],"termid":"GO:0071715"}


id: FYPO:0000655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding phenotype","termid":"FYPO:0000653"},{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA binding","termid":"FYPO:0000655"}


id: MONDO:0009316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hair defect-photosensitivity-intellectual disability syndrome (obsolete MONDO:0009316)","termid":"MONDO:0009316","xrefs":{"Monarch":{"xref_id":"0009316"}}}


id: GO:0031084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules. The human complex contains the Hps3, Hps5, and Hps6 proteins; the mouse complex contains ru2 and ru.","definition_xrefs":["PMID:15031569","PMID:14718540","PMID:12548288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BLOC complex","termid":"GO:0031082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BLOC-2 complex","termid":"GO:0031084"}


id: MONDO:0044652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete optic atrophy-peripheral neuropathy-developmental delay syndrome (obsolete MONDO:0044652)","termid":"MONDO:0044652","xrefs":{"Monarch":{"xref_id":"0044652"}}}


id: MONDO:0000524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mixed germ cell cancer that is located in areas of the body other than the ovary or testicle.","definition_xrefs":["DOID:0050907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"},{"relation_name":"is_a","term_name":"mixed germ cell tumor","termid":"MONDO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed extragonadal germ cell cancer","termid":"MONDO:0000524","xrefs":{"Monarch":{"xref_id":"0000524"}}}


id: PBO:0038897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor A3","termid":"PBO:0038897"}


id: GO:0061070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the female urethra over time from its initial formation to the mature structure. The female urethra is a renal system organ that carries urine from the bladder to outside the body, exiting above the vaginal opening.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethra development","termid":"GO:0061068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female urethra development","termid":"GO:0061070"}


id: PBO:0062106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 4 pseudogene","termid":"PBO:0062106"}


id: GO:0102426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: myricetin 3-O-beta-D-glucopyranoside + UDP-alpha-D-glucose = myricetin 3-O-gentiobioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete myricetin-3-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102426)","termid":"GO:0102426"}


id: GO:0051295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the directed movement of the meiotic spindle to a specific location in the cell occurs.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle localization","termid":"GO:0051293"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0051179","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"establishment of meiotic spindle localization","synonyms":[{"name":"establishment of meiotic spindle localisation","type":"exact"},{"name":"meiotic spindle positioning","type":"exact"},{"name":"spindle positioning during meiosis","type":"related"},{"name":"spindle positioning involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0051295"}


id: PBO:0084045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-protein beta subunit and guanine dissociation inhibitor for Gpa2p; ortholog of RACK1 that inhibits translation; core component of the small (40S) ribosomal subunit; required to prevent frameshifting at ribosomes stalled at repeated CGA codons; regulates P-body formation induced by replication stress; represses Gcn4p in the absence of amino acid starvation; controls phosphorylation of multiple proteins","termid":"PBO:0084045"}


id: GO:0051506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + ergosterol = UDP + O-glucosyl-ergosterol.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ergosterol UDP-glucosyltransferase activity (obsolete GO:0051506)","termid":"GO:0051506"}


id: PBO:0028351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CENP-A_containing_chromatin_organization","termid":"PBO:0028351"}


id: MONDO:0004439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the periocular region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periocular meningioma","secondary_identifiers":["NCIT:C6777","UMLS:C1335383","DOID:8030","MEDGEN:233849"],"termid":"MONDO:0004439","xrefs":{"Monarch":{"xref_id":"0004439"}}}


id: PBO:0077813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 pathway corepressor 1","termid":"PBO:0077813"}


id: GO:0046710
data:
  {"annotated_genes":["SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63872,101419],"is_not":false,"summary":null,"term":"GO:0046710"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GDP metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"GDP metabolism","type":"exact"}],"termid":"GO:0046710","terms_by_termid":{"GO:0046710":null}}


id: PBO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by UV","termid":"PBO:0000946"}


id: PBO:0044663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 5","termid":"PBO:0044663"}


id: GO:0019314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:jsg","GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-allose metabolic process","synonyms":[{"name":"D-allose metabolism","type":"exact"}],"termid":"GO:0019314"}


id: PBO:0056470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase like","termid":"PBO:0056470"}


id: MOD:01075
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a mercury atom or a cluster containing mercury for hydrogen atoms, or that coordinates a mercury ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury containing modified residue","synonyms":[{"name":"HgRes","type":"exact"}],"termid":"MOD:01075"}


id: MONDO:0017262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A inherited ichthyosis that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete inherited non-syndromic ichthyosis (obsolete MONDO:0017262)","secondary_identifiers":["icd11.foundation:213831678","Orphanet:281082"],"synonyms":[{"name":"isolated inherited ichthyosis","type":"exact"},{"name":"nonsyndromic inherited ichthyosis","type":"exact"}],"termid":"MONDO:0017262","xrefs":{"Monarch":{"xref_id":"0017262"}}}


id: PBO:0061258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like A","termid":"PBO:0061258"}


id: FYPO:0004623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which astral microtubule anchoring at the mitotic spindle pole body does not occur.","definition_xrefs":["PMID:15004232","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished astral microtubule anchoring at mitotic spindle pole body","synonyms":[{"name":"abolished astral microtubule anchoring at mitotic SPB","type":"exact"},{"name":"abolished astral microtubule anchoring at mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"abolished astral microtubule anchoring at mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"astral microtubule anchoring at mitotic spindle pole body abolished","type":"exact"}],"termid":"FYPO:0004623"}


id: PBO:0027457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation_at_cell_tip_during_cellular_response_to_reactive_oxygen_species","termid":"PBO:0027457"}


id: PBO:0053582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 605","termid":"PBO:0053582"}


id: PBO:0049696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan and proteoglycan link protein 2","termid":"PBO:0049696"}


id: GO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002581"},{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002586"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"negative regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002587"}


id: PBO:0031333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caffeine_during_vegetative_growth","termid":"PBO:0031333"}


id: PBO:0067677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 862, pseudogene","termid":"PBO:0067677"}


id: PBO:0062359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily S member 1","termid":"PBO:0062359"}


id: GO:0033954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 1,3-alpha-L-galactosidic linkages of neoagaro-oligosaccharides that are smaller than a hexamer, yielding 3,6-anhydro-L-galactose and D-galactose.","definition_xrefs":["EC:3.2.1.159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"alpha-neoagaro-oligosaccharide hydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.159-RXN"],"synonyms":[{"name":"alpha-NAOS hydrolase activity","type":"related"},{"name":"alpha-neoagaro-oligosaccharide 3-glycohydrolase activity","type":"related"},{"name":"alpha-neoagarooligosaccharide hydrolase activity","type":"related"}],"termid":"GO:0033954"}


id: PBO:0085474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable DNA helicase; involved in sister-chromatid cohesion and genome integrity and interstrand cross-link repair; interacts with ECO1 and CTF18; mutants are defective in silencing, rDNA recombination, aging and the heat shock response; FANCJ-like helicase family member; mutations in the human homolog, DDX11/ChLR1, cause Warsaw breakage syndrome","termid":"PBO:0085474"}


id: PBO:0027479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_cell_with_mitotic_G2/M_transition_delay_and_cell_cycle_arrest_in_M_phase","termid":"PBO:0027479"}


id: PBO:0051225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-1-1 (pseudogene)","termid":"PBO:0051225"}


id: MONDO:0858974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that is characterized by fatigue, problems with memory or concentration, joint and muscle pain, hair loss, weight changes and anxiety/depression. This syndrome may be related to breast implants","definition_xrefs":["PMID:35510012","DOID:0081323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast implant illness","termid":"MONDO:0858974","xrefs":{"Monarch":{"xref_id":"0858974"}}}


id: FYPO:0008082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagy is abnormal. Autophagy is the pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["PMID:35406650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal autophagy","termid":"FYPO:0008082"}


id: MONDO:0020730
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85221],"is_not":false,"summary":null,"term":"MONDO:0020730"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carpal tunnel syndrome","termid":"MONDO:0007275"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"carpal tunnel syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1830382","UMLS:C5779776","OMIM:115430","DOID:0070466"],"synonyms":[{"name":"CTS","type":"related"},{"name":"CTS1","type":"exact"},{"name":"amyotrophy, thenar, of carpal origin","type":"exact"},{"name":"carpal tunnel syndrome","type":"broad"},{"name":"carpal tunnel syndrome, familial","type":"exact"}],"termid":"MONDO:0020730","terms_by_termid":{"MONDO:0020730":null},"xrefs":{"Monarch":{"xref_id":"0020730"}}}


id: PBO:0109617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 2 (pseudogene)","termid":"PBO:0109617"}


id: PBO:0088828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMP deaminase family/ methyltransferase bifunctional enzyme involved in riboflavin biosynthesis and tRNA pseudouridine biosynthesis Rib2","termid":"PBO:0088828"}


id: PBO:0080792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPC complex subunit, DNA damage recognition and repair factor","termid":"PBO:0080792"}


id: PBO:0064370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 2 pseudogene 2","termid":"PBO:0064370"}


id: MONDO:0019361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete boutonneuse fever (obsolete MONDO:0019361)","termid":"MONDO:0019361","xrefs":{"Monarch":{"xref_id":"0019361"}}}


id: GO:0140693
data:
  {"annotated_genes":["SJAG_02045","SJAG_03905","SJAG_04640","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90598,91753,102090,104740],"is_not":false,"summary":null,"term":"GO:0140693"}]},"cv_name":"molecular_function","definition":"Binding and bringing together two or more macromolecules in contact, permitting those molecules to organize as a molecular condensate.","definition_xrefs":["PMID:28225081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_03023":null,"SJAG_03905":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"molecular condensate scaffold activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phase separation nucleation activity","type":"exact"},{"name":"phase separation nucleator activity","type":"exact"}],"termid":"GO:0140693","terms_by_termid":{"GO:0140693":null}}


id: PBO:0054865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2279","termid":"PBO:0054865"}


id: GO:1905108
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114823],"is_not":false,"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to guanosine.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:26007660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside binding","termid":"GO:0032550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"guanosine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905108","terms_by_termid":{"GO:1905108":null}}


id: GO:0097425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the smooth endoplasmic reticulum (also called smooth ER, or SER).","definition_xrefs":["NIF_Subcellular:sao184202831"],"gene_count":0,"genotype_count":0,"name":"obsolete smooth endoplasmic reticulum part (obsolete GO:0097425)","synonyms":[{"name":"SER subcomponent","type":"related"}],"termid":"GO:0097425"}


id: PBO:0088395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth3","termid":"PBO:0088395"}


id: GO:0010555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannitol stimulus.","definition_xrefs":["PMID:17999646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mannitol","synonyms":[{"name":"response to mannitol stimulus","type":"exact"}],"termid":"GO:0010555"}


id: GO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation","termid":"GO:0048762"}


id: PBO:0054174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1547","termid":"PBO:0054174"}


id: FYPO:0004043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"tetranucleate vegetative cell","synonyms":[{"name":"tetranucleate cells during vegetative growth","type":"exact"},{"name":"tetranucleate during vegetative growth","type":"exact"},{"name":"tetranucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004043"}


id: PBO:0064926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 catalytic subunit pseudogene","termid":"PBO:0064926"}


id: GO:0051289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein homooligomerization","termid":"GO:0051260"},{"relation_name":"is_a","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"protein homotetramerization","synonyms":[{"name":"protein homotetramer assembly","type":"exact"},{"name":"protein homotetramer biosynthesis","type":"exact"},{"name":"protein homotetramer biosynthetic process","type":"exact"},{"name":"protein homotetramer formation","type":"exact"}],"termid":"GO:0051289"}


