# terms

id: PBO:0031440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm_during_vegetative_growth","termid":"PBO:0031440"}


id: GO:0070638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any pyridine nucleoside, a nucleoside in which a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyridine nucleoside catabolic process","synonyms":[{"name":"pyridine nucleoside catabolism","type":"exact"},{"name":"pyridine nucleoside degradation","type":"exact"},{"name":"pyridine nucleoside breakdown","type":"exact"}],"termid":"GO:0070638"}


id: GO:0002541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process activating plasma proteins by proteolysis as part of an acute inflammatory response.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"},{"relation_name":"part_of","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"activation of plasma proteins involved in acute inflammatory response","termid":"GO:0002541"}


id: PBO:0031388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_phenylalanine","termid":"PBO:0031388"}


id: PBO:0057290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 509-2","termid":"PBO:0057290"}


id: SO:0001254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is an exact multiple of the haploid number and is greater than the diploid number.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_number_variation","termid":"SO:1000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Polyploid"],"termid":"SO:0001254"}


id: GO:0045630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of type 2 immune response","termid":"GO:0002830"},{"relation_name":"is_a","term_name":"positive regulation of T-helper cell differentiation","termid":"GO:0045624"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell differentiation","termid":"GO:0045628"},{"relation_name":"positively_regulates","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T-helper 2 cell differentiation","synonyms":[{"name":"activation of T-helper 2 cell differentiation","type":"narrow"},{"name":"positive regulation of T-helper 2 cell development","type":"related"},{"name":"stimulation of T-helper 2 cell differentiation","type":"narrow"},{"name":"up regulation of T-helper 2 cell differentiation","type":"exact"},{"name":"up-regulation of T-helper 2 cell differentiation","type":"exact"},{"name":"upregulation of T-helper 2 cell differentiation","type":"exact"}],"termid":"GO:0045630"}


id: PBO:0054427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1823","termid":"PBO:0054427"}


id: PBO:0015699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Hsp3101","termid":"PBO:0015699"}


id: SO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group II intron that recognizes IBS1/EBS1 and IBS2/EBS2 for the 5-prime exon and IBS3/EBS3 for the 3-prime exon.","definition_xrefs":["PMID:20463000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"group_II_intron","termid":"SO:0000603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_IIB_intron","synonyms":[{"name":"group IIB intron","type":"exact"}],"termid":"SO:0000382"}


id: PBO:0054411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1807","termid":"PBO:0054411"}


id: MONDO:0015737
data:
  {"annotated_genes":["SJAG_03379","SJAG_03025","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[85948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"},{"annotations":[85093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012538"}]},"cv_name":"mondo","definition":"Typical nemaline myopathy is a moderate neonatal form of nemaline myopathy (NM) characterized by facial and skeletal muscle weakness and mild respiratory involvement.","definition_xrefs":["Orphanet:171436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of nebulin","termid":"MONDO:0016194"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03025":null,"SJAG_03145":null,"SJAG_03379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"typical nemaline myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1105111633","GARD:12822","UMLS:C5680453","MEDGEN:1806265"],"synonyms":[{"name":"typical congenital nemaline myopathy","type":"related"}],"termid":"MONDO:0015737","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0012538":null},"xrefs":{"Monarch":{"xref_id":"0015737"}}}


id: GO:0023037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a light signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by light (obsolete GO:0023037)","synonyms":[{"name":"signal initiation by light","type":"exact"}],"termid":"GO:0023037"}


id: PR:O36027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neural Wiskott-Aldrich syndrome protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.15c","secondary_identifiers":["UniProtKB:O36027"],"synonyms":[{"name":"SPAC4F10.15c","type":"related"},{"name":"Spom972h-WASL","type":"exact"}],"termid":"PR:O36027"}


id: PBO:0087482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromosomal passenger complex (CPC); CPC is comprised of Ipl1p-Sli15p-Bir1p-Nbl1p and regulates chromosome segregation; required for chromosome bi-orientation and for spindle assembly checkpoint activation upon reduced sister kinetochore tension; relative distribution to shortened microtubules increases upon DNA replication stress; sumoylated in an Mms21p-dependent manner; human survivin homolog","termid":"PBO:0087482"}


id: MONDO:0958161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that is associated with PAX5 P80R mutation.","definition_xrefs":["DOID:0081411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B acute lymphoblastic leukemia with PAX5 P80R mutation","secondary_identifiers":["MEDGEN:1846082","UMLS:C5855498"],"termid":"MONDO:0958161","xrefs":{"Monarch":{"xref_id":"0958161"}}}


id: PBO:0051637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP U3 small nucleolar ribonucleoprotein 3","termid":"PBO:0051637"}


id: GO:0016894
data:
  {"annotated_genes":["SJAG_00754","SJAG_03328","SJAG_02708","SJAG_01044","SJAG_03675","SJAG_05237","SJAG_04752","SJAG_00623","SJAG_04907","SJAG_01260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[116242,96119,93934,59364,100360,100711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[116809,99987,100525,105090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 3'-phosphomonoesters.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease activity","termid":"GO:0004519"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_00754":null,"SJAG_01044":null,"SJAG_01260":null,"SJAG_02708":null,"SJAG_03328":null,"SJAG_03675":null,"SJAG_04752":null,"SJAG_04907":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.31.1"],"synonyms":[{"name":"3'-endonuclease activity","type":"exact"},{"name":"endoribonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","type":"related"}],"termid":"GO:0016894","terms_by_termid":{"GO:0000213":null,"GO:0008821":null,"GO:0048257":null}}


id: MONDO:1010745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis, non-human animal","termid":"MONDO:1010127"},{"relation_name":"is_a","term_name":"polymyositis, dog","termid":"MONDO:1010931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatomyositis, dog","secondary_identifiers":["OMIA:000270-9615"],"termid":"MONDO:1010745","xrefs":{"Monarch":{"xref_id":"1010745"}}}


id: PBO:0091838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan 1,6-beta-glucosidase Exg1","termid":"PBO:0091838"}


id: GO:0098599
data:
  {"annotated_genes":["SJAG_03377","SJAG_00734","SJAG_00774","SJAG_02268","SJAG_02056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108150,100125,99747,110051,92714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008474"}]},"cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoyl moiety from some substrate.","definition_xrefs":["GOC:pg","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00734":null,"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null,"SJAG_03377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"palmitoyl hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9027670","Reactome:R-HSA-5690046"],"termid":"GO:0098599","terms_by_termid":{"GO:0008474":null}}


id: PBO:0070051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 8, pseudogene","termid":"PBO:0070051"}


id: PBO:0114490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-coA synthetase isoform; along with Acs2p, acetyl-CoA synthetase isoform is the nuclear source of acetyl-coA for histone acetylation; expressed during growth on nonfermentable carbon sources and under aerobic conditions; metabolites mediate the formation of filament assemblies in meiotic cells, storing Acs1p in an inactive state and promoting efficient return to growth after starvation","termid":"PBO:0114490"}


id: PBO:0034526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_recombination_at_hotspot","termid":"PBO:0034526"}


id: PR:Q9Y812
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3-like centromeric protein cnp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:Q9Y812","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"histone H3-like centromeric protein cnp1 (Schizosaccharomyces pombe)","termid":"PR:000041369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-like centromeric protein cnp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.17","synonyms":[{"name":"CENP-A homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cnp1","type":"exact"},{"name":"centromere protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"silencing in the middle of the centromere protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y812"}


id: GO:0005345
data:
  {"annotated_genes":["SJAG_03777","SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015207"},{"annotations":[111682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015208"},{"annotations":[87647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042907"}]},"cv_name":"molecular_function","definition":"Enables the transfer of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transmembrane transporter activity","termid":"GO:0015205"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03777":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"purine nucleobase transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine base transmembrane transporter activity","type":"exact"},{"name":"purine transmembrane transporter activity","type":"related"}],"termid":"GO:0005345","terms_by_termid":{"GO:0015207":null,"GO:0015208":null,"GO:0042907":null}}


id: MONDO:0020165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic epicanthus (obsolete MONDO:0020165)","secondary_identifiers":["Orphanet:98574"],"termid":"MONDO:0020165","xrefs":{"Monarch":{"xref_id":"0020165"}}}


id: MONDO:0018564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare chromosomal anomaly characterized by intellectual disability, epilepsy or EEG abnormalities, poor speech, ataxia, and stereotypic hand movements.","definition_xrefs":["Orphanet:435638"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 3","termid":"MONDO:0016885"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3p25.3 microdeletion syndrome","secondary_identifiers":["UMLS:C5437630","MEDGEN:1733655","GARD:21813"],"synonyms":[{"name":"Del(3)p(25.3)","type":"exact"},{"name":"intellectual disability-epilepsy-stereotypic hand movement syndrome","type":"exact"},{"name":"monosomy 3p25.3","type":"exact"}],"termid":"MONDO:0018564","xrefs":{"Monarch":{"xref_id":"0018564"}}}


id: MONDO:0044980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of signal transduction (obsolete MONDO:0044980)","termid":"MONDO:0044980","xrefs":{"Monarch":{"xref_id":"0044980"}}}


id: MONDO:0007675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic acid decarboxylase, brain, membrane form","secondary_identifiers":["UMLS:C1841911","MEDGEN:333943","OMIM:138277"],"synonyms":[{"name":"glutamic acid decarboxylase, brain, membrane form","type":"exact"}],"termid":"MONDO:0007675","xrefs":{"Monarch":{"xref_id":"0007675"}}}


id: FYPO:0007839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah","PMID:34019809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"abnormal NAT activity","type":"related"},{"name":"abnormal protein N-terminal acetyltransferase activity","type":"exact"}],"termid":"FYPO:0007839"}


id: PBO:0088030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquinol-cytochrome-c reductase; a Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex; transfers electrons from ubiquinol to cytochrome c1 during respiration; during import, Rip1p is first imported into the mitochondrial matrix where it is processed, acquires its Fe-S cluster, and is folded, then is translocated into the inner membrane by the action of a homo-oligomer of Bcs1p, and finally is delivered by Bcs1p to Complex III for assembly","termid":"PBO:0088030"}


id: MONDO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from the sweat glands.","definition_xrefs":["NCIT:C3398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"sweat gland disorder","termid":"MONDO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sweat gland neoplasm","secondary_identifiers":["MESH:D013544","UMLS:C0038987","SCTID:126490003","ICD9:239.2","EFO:1001204","MONDO:0021219","DOID:2664","ICDO:8400/1","MEDGEN:21039"],"synonyms":[{"name":"neoplasm of sweat gland","type":"exact"},{"name":"neoplasm of the sweat gland","type":"exact"},{"name":"sweat gland neoplasm","type":"exact"},{"name":"sweat gland neoplasm (disease)","type":"exact"},{"name":"sweat gland neoplasms","type":"exact"},{"name":"sweat gland tumor","type":"exact"},{"name":"sweat gland tumor (morphologic abnormality)","type":"exact"},{"name":"sweat gland tumor NOS (morphologic abnormality)","type":"exact"},{"name":"sweat gland tumour","type":"exact"},{"name":"sweat gland tumour (morphologic abnormality)","type":"exact"},{"name":"sweat gland tumour NOS (morphologic abnormality)","type":"exact"},{"name":"tumor of sweat gland","type":"exact"},{"name":"tumor of the sweat gland","type":"exact"},{"name":"tumour of sweat gland","type":"exact"},{"name":"tumour of the sweat gland","type":"exact"}],"termid":"MONDO:0002381","xrefs":{"Monarch":{"xref_id":"0002381"}}}


id: PR:O60153
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19C7.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19C7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.04c","synonyms":[{"name":"Spom972h-SPBC19C7.04c","type":"exact"}],"termid":"PR:O60153"}


id: PBO:0018122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementation functionally complemented by S. cerevisiae VAM7","termid":"PBO:0018122"}


id: PATO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001014 absolute occurence (obsolete PATO:0001014)","termid":"PATO:0001014"}


id: PBO:0080613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 47","termid":"PBO:0080613"}


id: MONDO:0014795
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85017],"is_not":false,"summary":null,"term":"MONDO:0014795"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"is_obsolete":false,"name":"exercise intolerance, riboflavin-responsive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:896368","UMLS:C4225187","OMIM:616839"],"synonyms":[{"name":"RREI","type":"related"},{"name":"exercise intolerance, riboflavin-responsive","type":"exact"}],"termid":"MONDO:0014795","terms_by_termid":{"MONDO:0014795":null},"xrefs":{"Monarch":{"xref_id":"0014795"}}}


id: GO:0050337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiosulfate + 2 glutathione = sulfite + glutathione disulfide + sulfide.","definition_xrefs":["MetaCyc:THIOSULFATE--THIOL-SULFURTRANSFERASE-RXN","EC:2.8.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"thiosulfate-thiol sulfurtransferase activity","secondary_identifiers":["RHEA:14505","Reactome:R-HSA-1655879"],"synonyms":[{"name":"glutathione-dependent thiosulfate reductase activity","type":"related"},{"name":"sulfane reductase activity","type":"related"},{"name":"sulfane sulfurtransferase activity","type":"related"},{"name":"thiosulfate:thiol sulfurtransferase activity","type":"related"},{"name":"thiosulphate-thiol sulphurtransferase activity","type":"exact"}],"termid":"GO:0050337"}


id: PBO:0088730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A thioesterase The13","termid":"PBO:0088730"}


id: MONDO:0014661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex with nail dystrophy","secondary_identifiers":["MEDGEN:906476","OMIM:616487","UMLS:C4225309"],"synonyms":[{"name":"EBSND","type":"related"},{"name":"epidermolysis bullosa simplex 5D, generalised intermediate, autosomal recessive","type":"exact"},{"name":"epidermolysis bullosa simplex 5D, generalized intermediate, autosomal recessive","type":"exact"},{"name":"epidermolysis bullosa simplex with nail dystrophy","type":"exact"}],"termid":"MONDO:0014661","xrefs":{"Monarch":{"xref_id":"0014661"}}}


id: PBO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.20","termid":"PBO:0001800"}


id: PBO:0082793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U2 snRNP; required for the first catalytic step of splicing and for spliceosomal assembly; interacts with Rds3p and is required for Mer1p-activated splicing; diploid mutants have a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids","termid":"PBO:0082793"}


id: GO:0034424
data:
  {"annotated_genes":["SJAG_03511","SJAG_07012"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98061,111704],"is_not":false,"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"A membrane-associated protein complex that is required for a late stage of endosomal transport. In budding yeast, this complex consists of Vps55p and Vps68p proteins.","definition_xrefs":["PMID:18216282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03511":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Vps55/Vps68 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034424","terms_by_termid":{"GO:0034424":null}}


id: PBO:0075390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp3 transcription factor pseudogene","termid":"PBO:0075390"}


id: GO:1904212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iodide transmembrane transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:20392814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"is_a","term_name":"regulation of iodide transport","termid":"GO:1904201"},{"relation_name":"regulates","term_name":"iodide transmembrane transport","termid":"GO:1904200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of iodide transmembrane transport","termid":"GO:1904212"}


id: PR:O14095
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin domain-containing protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01642","PANTHER:PTHR21148:SF11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein plp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.12c","secondary_identifiers":["UniProtKB:O14095"],"synonyms":[{"name":"Spom972h-TXNDC9","type":"exact"},{"name":"phosducin-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14095"}


id: PBO:0034228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fasciculates_with","termid":"PBO:0034228"}


id: PBO:0017949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc7/UbcP3","termid":"PBO:0017949"}


id: GO:0003974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-galactosamine.","definition_xrefs":["EC:5.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 4-epimerase activity","secondary_identifiers":["RHEA:20517","MetaCyc:UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN"],"synonyms":[{"name":"UDP acetylglucosamine epimerase activity","type":"related"},{"name":"UDP-GlcNAc 4-epimerase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine 4-epimerase activity","type":"related"},{"name":"uridine 5'-diphospho-N-acetylglucosamine-4-epimerase activity","type":"related"},{"name":"uridine diphosphate N-acetylglucosamine-4-epimerase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine epimerase activity","type":"related"}],"termid":"GO:0003974"}


id: GO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a natural killer cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"},{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"natural killer cell cytokine production","synonyms":[{"name":"NK cell cytokine production","type":"exact"}],"termid":"GO:0002370"}


id: PBO:0054495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1895","termid":"PBO:0054495"}


id: PBO:0091106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex platform subcomplex scaffold subunit Apc1","termid":"PBO:0091106"}


id: PBO:0091133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox20","termid":"PBO:0091133"}


id: FYPO:0009074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing serine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002057","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"increased cell population growth on serine nitrogen source","synonyms":[{"name":"increased growth on serine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on serine nitrogen source","type":"exact"}],"termid":"FYPO:0009074"}


id: PBO:0078202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-4","termid":"PBO:0078202"}


id: PBO:0059874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 11","termid":"PBO:0059874"}


id: PBO:0112606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-22 sterol desaturase (cytochrome P450) Erg5","termid":"PBO:0112606"}


id: MONDO:0020210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hyperopia that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic hyperopia (obsolete MONDO:0020210)","secondary_identifiers":["Orphanet:98622"],"synonyms":[{"name":"syndrome associated with hyperopia","type":"exact"},{"name":"syndromic hyperopia","type":"exact"}],"termid":"MONDO:0020210","xrefs":{"Monarch":{"xref_id":"0020210"}}}


id: GO:0090083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of inclusion body assembly","termid":"GO:0090083"}


id: PBO:0075308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5","termid":"PBO:0075308"}


id: GO:0009108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of coenzymes, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme biosynthetic process (obsolete GO:0009108)","synonyms":[{"name":"coenzyme anabolism","type":"exact"},{"name":"coenzyme and prosthetic group biosynthesis","type":"broad"},{"name":"coenzyme and prosthetic group biosynthetic process","type":"broad"},{"name":"coenzyme biosynthesis","type":"exact"},{"name":"coenzyme formation","type":"exact"},{"name":"coenzyme synthesis","type":"exact"}],"termid":"GO:0009108"}


id: GO:0044600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + protein = diphosphate + guanylyl-protein; mediates the addition of an guanylyl (guanosine 5'-monophosphate; GMP group) to specific residues of target proteins.","definition_xrefs":["PMID:20651120","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"protein guanylyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9765952"],"termid":"GO:0044600"}


id: PBO:0062318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 3","termid":"PBO:0062318"}


id: PBO:0040053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 1","termid":"PBO:0040053"}


id: MONDO:0800381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XX disorder of sex development","termid":"MONDO:0017576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX true hermaphroditism, SRY-positive","termid":"MONDO:0800381","xrefs":{"Monarch":{"xref_id":"0800381"}}}


id: PBO:0017429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_input","termid":"PBO:0017429"}


id: PBO:0028433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_acetylation","termid":"PBO:0028433"}


id: FYPO:0008178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere inner repeat region are present at normal levels (i.e. indistinguishable from wild-type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal centromeric inner repeat transcript level","termid":"FYPO:0008178"}


id: MONDO:0100236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ocular dysgenesis disorder in which the cause of the disease is a mutation in the LTBP2 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236","xrefs":{"Monarch":{"xref_id":"0100236"}}}


id: PR:Q09853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MON2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01811","PANTHER:PTHR10663:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein MON2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.13c","secondary_identifiers":["UniProtKB:Q09853"],"synonyms":[{"name":"Spom972h-MON2","type":"exact"}],"termid":"PR:Q09853"}


id: MONDO:0015700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic deficiency of any membrane attack complex (MAC, also known as terminal component complex (TCC)) component of the complement system (C5, C6, C7, C8, C9). Deficiencies of the terminal complement pathway results in a predisposition to infections, such as invasive meningococcal disease or disseminated gonococcal infection.","definition_xrefs":["PMID:20930072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency due to a late component of complement deficiency","secondary_identifiers":["Orphanet:169150","icd11.foundation:531050218","MEDGEN:585067","UMLS:C0398765","GARD:17050"],"synonyms":[{"name":"deficiency of complement of terminal pathway","type":"exact"},{"name":"immunodeficiency due to C5 to C9 component complement deficiency","type":"exact"},{"name":"immunodeficiency due to a C5 to C9 component complement deficiency","type":"exact"},{"name":"terminal complement pathway deficiency","type":"exact"}],"termid":"MONDO:0015700","xrefs":{"Monarch":{"xref_id":"0015700"}}}


id: GO:0097144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAX, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BAX complex","termid":"GO:0097144"}


id: PR:O14269
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iss10 gene.","definition_xrefs":["UniProtKB:O14269","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C7D4.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.14c","synonyms":[{"name":"Spom972h-iss10","type":"exact"}],"termid":"PR:O14269"}


id: PBO:0003682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Ask1","termid":"PBO:0003682"}


id: GO:0045209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Leptomycin B-sensitive movement of a MAPK phosphatase from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase export from nucleus, leptomycin B sensitive (obsolete GO:0045209)","synonyms":[{"name":"MAPK phosphatase export from cell nucleus, leptomycin B sensitive","type":"exact"},{"name":"MAPK phosphatase export out of nucleus, leptomycin B sensitive","type":"exact"},{"name":"MAPK phosphatase transport from nucleus to cytoplasm, leptomycin B sensitive","type":"exact"},{"name":"MAPK phosphatase-nucleus export, leptomycin B sensitive","type":"exact"},{"name":"leptomycin B-sensitive MAPK phosphatase export out of nucleus","type":"exact"},{"name":"leptomycin B-sensitive MAPK phosphatase transport from nucleus to cytoplasm","type":"exact"},{"name":"leptomycin B-sensitive MAPK phosphatase-nucleus export","type":"exact"}],"termid":"GO:0045209"}


id: GO:0100059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates phenotypic switching.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100059)","termid":"GO:0100059"}


id: GO:1901064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving syringal lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"syringal lignin metabolic process","synonyms":[{"name":"S-lignin metabolic process","type":"exact"},{"name":"syringal lignin metabolism","type":"exact"}],"termid":"GO:1901064"}


id: PBO:0039905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 7","termid":"PBO:0039905"}


id: PBO:0050601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 11-beta dehydrogenase 1","termid":"PBO:0050601"}


id: PBO:0005564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC2 subunit Bit61","termid":"PBO:0005564"}


id: RO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function_of","termid":"RO:0000079"}


id: GO:0015724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of formate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"formate transport","termid":"GO:0015724"}


id: GO:0055016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypochord over time, from its formation to the mature structure. The hypochord is a transient rod-like structure in the embryos of fish, lampreys and amphibians that is located immediately ventral to the notochord. The hypochord may play a role in positioning the dorsal aorta.","definition_xrefs":["GOC:devbiol","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypochord development","synonyms":[{"name":"subnotochordal rod development","type":"exact"}],"termid":"GO:0055016"}


id: GO:0040011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion","termid":"GO:0040011"}


id: GO:0005106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of proteins that interact with the ephrin receptors.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ephrin (obsolete GO:0005106)","synonyms":[{"name":"ephrin","type":"exact"}],"termid":"GO:0005106"}


id: MONDO:0006546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A skin condition that primarily affects the scalp and face and presents as scaly inflammation. Examples include itchy, dry skin and dandruff.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythematosquamous dermatosis","secondary_identifiers":["DOID:9097","ICD9:690.8","NCIT:C34591","MEDGEN:5014","UMLS:C0014747","SCTID:54792008","ICD9:690","EFO:1000695"],"synonyms":[{"name":"Other erythematosquamous dermatosis","type":"exact"},{"name":"erythematosquamous dermatosis","type":"exact"}],"termid":"MONDO:0006546","xrefs":{"Monarch":{"xref_id":"0006546"}}}


id: MONDO:0016715
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ependymoblastoma is a rare type of primitive neuroectodermal tumor (PNET) that usually occurs in young children under the age of 2 and is histologically distinguished by the production of ependymoblastic rosettes. It is associated with an aggressive course and a poor prognosis.","definition_xrefs":["Orphanet:251880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"},{"relation_name":"is_a","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ependymoblastoma","secondary_identifiers":["ONCOTREE:ETANTR","DOID:0080903","MedDRA:10014966","UMLS:C0700367","NCIT:C4915","GARD:20720","DOID:4794","MEDGEN:152150","SCTID:715901002"],"synonyms":[{"name":"ETANTR","type":"related"},{"name":"ETMR","type":"related"},{"name":"ETMR, C19MC-altered","type":"exact"},{"name":"embryonal tumor with Multilayered Rosettes","type":"exact"},{"name":"embryonal tumor with Multilayered Rosettes with C19MC amplification","type":"exact"},{"name":"embryonal tumor with Multilayered Rosettes, C19MC-altered","type":"exact"},{"name":"embryonal tumor with abundant neuropil and true Rosettes","type":"exact"},{"name":"embryonal tumor with abundant neuropil and true rosettes","type":"related"},{"name":"embryonal tumour with Multilayered Rosettes","type":"exact"},{"name":"embryonal tumour with Multilayered Rosettes with C19MC amplification","type":"exact"},{"name":"embryonal tumour with Multilayered Rosettes, C19MC-altered","type":"exact"},{"name":"embryonal tumour with abundant neuropil and true Rosettes","type":"exact"},{"name":"embryonal tumour with abundant neuropil and true rosettes","type":"related"},{"name":"ependymoblastoma","type":"exact"},{"name":"neuroectodermal tumors primitive","type":"related"},{"name":"neuroectodermal tumours primitive","type":"related"}],"termid":"MONDO:0016715","xrefs":{"Monarch":{"xref_id":"0016715"}}}


id: PBO:0034303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_evidence_with_support_from","termid":"PBO:0034303"}


id: PBO:0077888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPRG1 antisense RNA 2","termid":"PBO:0077888"}


id: MONDO:0007818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of decreased or absent presence or activity of signal transducer and activator of transcription 3 protein. Deficiency of this protein is associated with hyper-IgE syndrome.","definition_xrefs":["NCIT:C126342"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete immune deficiency with skin involvement (obsolete MONDO:0019305)","termid":"MONDO:0019305"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hyper-IgE recurrent infection syndrome 1, autosomal dominant","secondary_identifiers":["DOID:3261","OMIM:147060","MESH:C567925","OMIM:146840","MESH:C564135","GARD:6800","Orphanet:2314","SCTID:50926003"],"synonyms":[{"name":"AD hyperimmunoglobulin E syndrome","type":"exact"},{"name":"AD-HIES","type":"exact"},{"name":"Buckley syndrome","type":"exact"},{"name":"HIES autosomal dominant","type":"exact"},{"name":"HIES, autosomal dominant","type":"exact"},{"name":"JOB syndrome","type":"exact"},{"name":"Job syndrome autosomal dominant","type":"exact"},{"name":"Job's syndrome","type":"exact"},{"name":"STAT3 deficiency","type":"exact"},{"name":"autosomal dominant HIES","type":"exact"},{"name":"autosomal dominant hyper IgE syndrome","type":"exact"},{"name":"autosomal dominant hyper-IgE syndrome","type":"exact"},{"name":"autosomal dominant hyperimmunoglobulin E syndrome","type":"exact"},{"name":"hyper Ig E syndrome, autosomal dominant","type":"exact"},{"name":"hyper-IgE recurrent infection syndrome","type":"broad"},{"name":"hyper-IgE recurrent infection syndrome, autosomal dominant","type":"exact"},{"name":"hyper-IgE syndrome, autosomal dominant","type":"exact"},{"name":"hyperimmunoglobulin E recurrent infection syndrome, autosomal dominant","type":"exact"},{"name":"hyperimmunoglobulin E syndrome type 1","type":"exact"},{"name":"hyperimmunoglobulin E-recurrent infection syndrome","type":"broad"},{"name":"immunodeficiency with defective leukocyte and lymphocyte function and with response to histamine-1 antagonist","type":"exact"}],"termid":"MONDO:0007818","xrefs":{"Monarch":{"xref_id":"0007818"}}}


id: PBO:0058889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10526","termid":"PBO:0058889"}


id: PBO:0052258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 1A","termid":"PBO:0052258"}


id: GO:0008002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The electron-lucent layer of the basal lamina adjacent to the basal plasma membrane of the cells that rest on the lamina.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete lamina lucida (obsolete GO:0008002)","secondary_identifiers":["Wikipedia:Lamina_lucida"],"termid":"GO:0008002"}


id: GO:0006404
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id: FYECO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ciclopirox olamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ciclopirox olamine","synonyms":[{"name":"+ ciclopirox olamine","type":"exact"}],"termid":"FYECO:0000423"}


id: GO:0009966
data:
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id: PBO:0017591
data:
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id: GO:0051750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (3E,5Z)-dienoyl-CoA = a (2E,4E)-(5,6-saturated)-dienoyl-CoA.","definition_xrefs":["PMID:11278886","PMID:16040662","RHEA:45240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity","secondary_identifiers":["GO:0008416","EC:5.3.3.21"],"synonyms":[{"name":"delta(3,5),delta(2,4)-dienoyl-coenzyme A isomerase activity","type":"exact"},{"name":"delta3,5-delta2,4-dienoyl-CoA isomerase activity","type":"exact"},{"name":"delta5-delta2,4-dienoyl-CoA isomerase activity","type":"related"}],"termid":"GO:0051750"}


id: PATO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A magnetism which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"magnetic","termid":"PATO:0001685"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased magnetism","synonyms":[{"name":"low magnetism","type":"exact"}],"termid":"PATO:0001684"}


id: MONDO:0008675
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86398,86399],"is_not":false,"summary":null,"term":"MONDO:0008675"}]},"cv_name":"mondo","definition":"A very rare, multiple congenital contractures syndrome characterized by a microstomia with a whistling appearance of the mouth, distinctive facies, club foot and joint contractures. FSS is the most severe form of distal arthrogryposis.","definition_xrefs":["Orphanet:2053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis","termid":"MONDO:0008779"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Freeman-Sheldon syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111605","icd11.foundation:1314169421","DOID:0111604","MESH:C535483","NCIT:C98931","SCTID:52616002","UMLS:C0265224","OMIM:193700","MEDGEN:120516","NORD:1161","GARD:6466"],"synonyms":[{"name":"Craniocarpotarsal dysplasia","type":"exact"},{"name":"Craniocarpotarsal dystrophy","type":"exact"},{"name":"DA2A","type":"related"},{"name":"FSS","type":"related"},{"name":"Freeman Sheldon Syndrome","type":"exact"},{"name":"Freeman Sheldon syndrome","type":"exact"},{"name":"Freeman-Sheldon syndrome","type":"exact"},{"name":"arthrogryposis distal type 2A","type":"related"},{"name":"arthrogryposis, distal, type 2A","type":"related"},{"name":"arthrogryposis, distal, type 2A (Freeman-Sheldon)","type":"exact"},{"name":"cranio-carpo-tarsal syndrome","type":"exact"},{"name":"craniocarpotarsal dysplasia","type":"exact"},{"name":"craniocarpotarsal dystrophy","type":"exact"},{"name":"distal arthrogryposis type 2A","type":"exact"},{"name":"whistling face syndrome","type":"exact"},{"name":"whistling face-windmill vane hand syndrome","type":"exact"},{"name":"whistling-face syndrome","type":"exact"},{"name":"windmill-vane-hand syndrome","type":"exact"}],"termid":"MONDO:0008675","terms_by_termid":{"MONDO:0008675":null},"xrefs":{"Monarch":{"xref_id":"0008675"}}}


id: FYPO:0008303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during prophase of the first division of the meiotic cell cycle in which the number of sites at which the protein Rad51 accumulates is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal number of Rad51 foci during meiotic prophase I","termid":"FYPO:0008303"}


id: PBO:0027027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_iron_homeostasis_gene_mRNA_during_vegetative_growth","termid":"PBO:0027027"}


id: GO:0097058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene) and cytokine receptor-like factor 1 (product of the CRLF gene) and is secreted into the extracellular space. The CRLF-CLCF1 complex is a ligand for the ciliary neurotrophic factor (CNTF) receptor complex.","definition_xrefs":["PMID:10966616","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CRLF-CLCF1 complex","synonyms":[{"name":"CLF-CLC complex","type":"narrow"}],"termid":"GO:0097058"}


id: MONDO:1011523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, horse","secondary_identifiers":["OMIA:000437-9796"],"termid":"MONDO:1011523","xrefs":{"Monarch":{"xref_id":"1011523"}}}


id: PBO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript, alternative start","termid":"PBO:0002214"}


id: GO:0102071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,10-epoxy-18-hydroxystearate + H2O = 9,10,18-trihydroxystearate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,10-epoxy-18-hydroxystearate hydrolase activity (obsolete GO:0102071)","termid":"GO:0102071"}


id: GO:0051362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a 2-tetrahydropyridinyl-5-imidazolinone protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a lysine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. In addition, the residue N lysine undergoes cyclization. The alpha-amino nitrogen is replaced by the epsilon-amino nitrogen, the peptide chain is broken, residue N-1 is released as an amide, and a double bond is formed between the alpha-carbon and the nitrogen so that a tetrahydropyridine ring results. This modification is found in the GFP-like fluorescent chromoprotein FP538 from the sea anemone Zoanthus species.","definition_xrefs":["PMID:15628861","PDB:1XAE","PMID:10504696","RESID:AA0382"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-tetrahydropyridinyl-5-imidazolinone glycine (obsolete GO:0051362)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-tetrahydropyridinyl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-tetrahydropyridinyl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051362"}


id: PBO:0005183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Cut15","termid":"PBO:0005183"}


id: PBO:0089054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2","termid":"PBO:0089054"}


id: GO:1903435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of constitutive secretory pathway.","definition_xrefs":["PMID:22899725","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of constitutive secretory pathway","termid":"GO:1903433"},{"relation_name":"positively_regulates","term_name":"constitutive secretory pathway","termid":"GO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of constitutive secretory pathway","synonyms":[{"name":"activation of constitutive secretory pathway","type":"narrow"},{"name":"up regulation of constitutive secretory pathway","type":"exact"},{"name":"up-regulation of constitutive secretory pathway","type":"exact"},{"name":"upregulation of constitutive secretory pathway","type":"exact"}],"termid":"GO:1903435"}


id: MOD:01065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification produced in a non-enzymatic reaction between a carbohydrate carbonyl group (C1 of aldohexose or C2 of fructose) and a protein N-terminal amino group to form a Schiff-base or an Amadori ketosamine  (or aminoketose) residue adduct.","definition_xrefs":["Unimod:41#N-term","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycated residue","termid":"MOD:00767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"hexose glycated N-terminal","termid":"MOD:01065"}


id: PBO:0046132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H pseudogene 2","termid":"PBO:0046132"}


id: MONDO:0036484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0018778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, dominant intermediate G","secondary_identifiers":["DOID:0080294","MEDGEN:1642893","UMLS:C4693509","OMIM:617882"],"synonyms":[{"name":"CMTDIG","type":"related"},{"name":"Charcot-Marie-Tooth disease dominant intermediate G","type":"related"},{"name":"Charcot-Marie-Tooth disease, dominant intermediate G","type":"exact"}],"termid":"MONDO:0036484","xrefs":{"Monarch":{"xref_id":"0036484"}}}


id: PBO:0055471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2904","termid":"PBO:0055471"}


id: PBO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse3","termid":"PBO:0005424"}


id: GO:0072124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"}


id: PBO:0014295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Ufd1-Npl4 complex subunit Ufd1 involved in ubiquitin-dependent protein catabolism (predicted)","termid":"PBO:0014295"}


id: PBO:0080808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 4","termid":"PBO:0080808"}


id: PBO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase","termid":"PBO:0002014"}


id: PR:Q9UTI2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grx2 gene.","definition_xrefs":["UniProtKB:Q9UTI2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.09","synonyms":[{"name":"Spom972h-grx2","type":"exact"}],"termid":"PR:Q9UTI2"}


id: MONDO:0013857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alar cleft, isolated","secondary_identifiers":["OMIM:614687","UMLS:C3553476","MEDGEN:766390"],"synonyms":[{"name":"alar cleft, isolated","type":"exact"}],"termid":"MONDO:0013857","xrefs":{"Monarch":{"xref_id":"0013857"}}}


id: MONDO:0020354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma of choroid and retina is a rare, genetic developmental defect during embryogenesis characterized by the partial absence of retinal pigment epithelium and choroid, most frequently located in the inferonasal quadrant. Patients usually present reduced vision and have an increased risk for retinal detachment. Other ocular anomalies (e.g. coloboma of iris, microcornea, nystagmus, strabismus, microphthalmos) are usually associated, however it may also be isolated.","definition_xrefs":["Orphanet:98942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, ocular, autosomal dominant","termid":"MONDO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma of choroid and retina","secondary_identifiers":["GARD:16875","icd11.foundation:20223105","SCTID:39302008","UMLS:C4708599","MEDGEN:1643994"],"synonyms":[{"name":"choroidal coloboma","type":"related"},{"name":"retinal coloboma","type":"related"},{"name":"retinochoroidal coloboma","type":"related"}],"termid":"MONDO:0020354","xrefs":{"Monarch":{"xref_id":"0020354"}}}


id: PBO:0011416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_using","termid":"PBO:0011416"}


id: PBO:0048923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member T","termid":"PBO:0048923"}


id: GO:0003972
data:
  {"annotated_genes":["SJAG_00956"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89857],"is_not":false,"summary":null,"term":"GO:0003972"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (ribonucleotide)n-3'-hydroxyl + 5'-phospho-(ribonucleotide)m = (ribonucleotide)n+m + AMP + diphosphate.","definition_xrefs":["EC:6.5.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA ligase activity","termid":"GO:0008452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"RNA ligase (ATP) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696816","MetaCyc:RNA-LIGASE-ATP-RXN"],"synonyms":[{"name":"poly(ribonucleotide):poly(ribonucleotide) ligase (AMP-forming)","type":"related"},{"name":"polyribonucleotide ligase activity","type":"related"},{"name":"polyribonucleotide synthase (ATP) activity","type":"related"},{"name":"ribonucleic ligase activity","type":"broad"}],"termid":"GO:0003972","terms_by_termid":{"GO:0003972":null}}


id: MONDO:0004392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extraskeletal myxoid chondrosarcoma arising from the structures within the cranium.","definition_xrefs":["NCIT:C5462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"extraskeletal myxoid chondrosarcoma","termid":"MONDO:0012825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intracranial extraskeletal myxoid chondrosarcoma","secondary_identifiers":["UMLS:C1334238","MEDGEN:232660","DOID:7903"],"synonyms":[{"name":"intracranial chondrosarcoma","type":"related"},{"name":"intracranial extraskeletal myxoid chondrosarcoma","type":"exact"}],"termid":"MONDO:0004392","xrefs":{"Monarch":{"xref_id":"0004392"}}}


id: PBO:0028135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_pseudouridine_synthesis_abolished_at_specific_site","termid":"PBO:0028135"}


id: GO:0005984
data:
  {"annotated_genes":["SJAG_02131","SJAG_01531","SJAG_01209","SJAG_01646","SJAG_00129","SJAG_04301","SJAG_04859","SJAG_02949","SJAG_00182","SJAG_01427","SJAG_03824","SJAG_01862"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100782,100783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[99535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[115257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[108052,92543,96336,100245,62109,91050,95717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"},{"annotations":[110654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"},{"annotations":[95718,91051,110655,91052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005991"},{"annotations":[91053,110656,95719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070413"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any disaccharide, sugars composed of two monosaccharide units.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02131":null,"SJAG_02949":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"disaccharide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"disaccharide metabolism","type":"exact"}],"termid":"GO:0005984","terms_by_termid":{"GO:0000025":null,"GO:0005987":null,"GO:0005991":null,"GO:0005992":null,"GO:0005993":null,"GO:0005995":null,"GO:0070413":null}}


id: GO:0071607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein-1 gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 gamma production","synonyms":[{"name":"CCL9 production","type":"exact"},{"name":"MIP-1g production","type":"exact"},{"name":"chemokine (C-C motif) ligand 9 production","type":"exact"}],"termid":"GO:0071607"}


id: GO:0018686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 6-hydroxypseudooxynicotine + O2 = 2 2,6-dihydroxypseudooxynicotine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy pseudo-oxynicotine monooxygenase activity (obsolete GO:0018686)","termid":"GO:0018686"}


id: PBO:0076156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 divergent transcript","termid":"PBO:0076156"}


id: PBO:0052344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 2A","termid":"PBO:0052344"}


id: PBO:0047772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box B1","termid":"PBO:0047772"}


id: PBO:0084796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein involved in lipid homeostasis; involved in mobilization of CoQ from its site of synthesis on the inner mitochondrial membrane to other sites of action; associates with mitochondrial ribosome; involved in mitochondrial morphology; non-essential gene which interacts genetically with MDM10, and other members of ERMES complex; transcription is periodic during metabolic cycle; homologous to human aarF domain containing kinase, ADCK1","termid":"PBO:0084796"}


id: FYPO:0005885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to myxothiazol. Cells stop growing (and may die) at a concentration of myxothiazol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to myxothiazol","synonyms":[{"name":"hypersensitive to myxothiazol","type":"exact"},{"name":"sensitive to MXT","type":"exact"},{"name":"sensitive to myxothiazol during mitotic cell cycle","type":"related"},{"name":"sensitive to myxothiazol during vegetative growth","type":"exact"}],"termid":"FYPO:0005885"}


id: PBO:0062421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 66 pseudogene","termid":"PBO:0062421"}


id: GO:0007234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated in response to osmotic change, as mediated through a phosphorelay system. In S.cerevisiae, the osmosensor is the histidine kinase Sln1.","definition_xrefs":["PMID:9843501","PMID:26787842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"},{"relation_name":"is_a","term_name":"osmosensory signaling pathway","termid":"GO:0007231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"osmosensory signaling via phosphorelay pathway","synonyms":[{"name":"osmolarity sensing via two-component system","type":"exact"},{"name":"osmolarity signaling pathway via two-component system","type":"exact"},{"name":"osmolarity signalling pathway via two-component system","type":"exact"},{"name":"osmosensory signaling pathway via two-component system","type":"narrow"},{"name":"osmosensory signalling pathway via two-component system","type":"exact"},{"name":"signal transduction during osmotic stress via two-component system","type":"exact"}],"termid":"GO:0007234"}


id: PBO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.1","termid":"PBO:0000941"}


id: GO:0034916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-methylhexanoyl-CoA = 2-methylhex-2-enoyl-CoA + 2 H+ + e-.","definition_xrefs":["UM-BBD_reactionID:r0928"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylhexanoyl-CoA dehydrogenase activity (obsolete GO:0034916)","termid":"GO:0034916"}


id: FYPO:0003762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic cell cycle spindle assembly checkpoint is normal (i.e. indistinguishable from wild type). The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0001312","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic spindle assembly checkpoint","synonyms":[{"name":"normal mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"normal mitotic spindle assembly checkpoint activation","type":"related"},{"name":"normal spindle assembly checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal spindle assembly checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0003762"}


id: PBO:0061958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 14","termid":"PBO:0061958"}


id: GO:0036097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in forming the mature 3' end of a miRNA from a pre-miRNA.","definition_xrefs":["GOC:sart","PMID:22055292"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-miRNA 3'-end processing (obsolete GO:0036097)","synonyms":[{"name":"miRNA 3'-end processing","type":"broad"},{"name":"microRNA 3'-end processing","type":"broad"},{"name":"pre-miRNA 3'-end processing","type":"exact"}],"termid":"GO:0036097"}


id: GO:0018559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1-dichloro-2-(dihydroxy-4'-chorophenyl)-2-(4-chlorophenyl)ethene + O2 = 6-oxo-2-hydroxy-7-(4-chlorophenyl)-3,8,8-trichloroocta-2E,4E,7-trienoate.","definition_xrefs":["UM-BBD_reactionID:r0442"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,1-dichloro-2-(dihydroxy-4-chlorophenyl)-(4-chlorophenyl)ethene 1,2-dioxygenase activity (obsolete GO:0018559)","synonyms":[{"name":"1,1-dichloro-2-(dihydroxy-4-chlorophenyl)-(4-chlorophenyl)ethylene 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018559"}


id: PBO:0047976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member C, pseudogene","termid":"PBO:0047976"}


id: PBO:0028652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_snRNA_3'-end_processing","termid":"PBO:0028652"}


id: GO:0030273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the cyclic peptide hormone melanin-concentrating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor activity","synonyms":[{"name":"MCH receptor","type":"exact"}],"termid":"GO:0030273"}


id: MONDO:0014662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by congenital insensitivity to pain and decreased sweating and tear production that has material basis in homozygous mutation in the PRDM12 gene on chromosome 9q34.","definition_xrefs":["DOID:0070153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002320"],"is_obsolete":false,"name":"congenital insensitivity to pain-hypohidrosis syndrome","secondary_identifiers":["MEDGEN:894363","UMLS:C4225308","GARD:17866","OMIM:616488","Orphanet:478664"],"synonyms":[{"name":"CIP-hypohidrosis syndrome","type":"exact"},{"name":"HSAN 8","type":"related"},{"name":"HSAN8","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 8","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type VIII","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type 8","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type VIII","type":"related"}],"termid":"MONDO:0014662","xrefs":{"Monarch":{"xref_id":"0014662"}}}


id: GO:2000730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase I transcription.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase I","termid":"GO:0006356"},{"relation_name":"is_a","term_name":"regulation of termination of DNA-templated transcription","termid":"GO:0031554"},{"relation_name":"regulates","term_name":"termination of RNA polymerase I transcription","termid":"GO:0006363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase I transcription","synonyms":[{"name":"regulation of RNA polymerase I transcription termination","type":"exact"},{"name":"regulation of transcription termination from Pol I promoter","type":"exact"},{"name":"regulation of transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2000730"}


id: GO:0047406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H2O = N-acetyl-D-glucosamine + L-asparagine.","definition_xrefs":["EC:3.2.2.11","RHEA:12324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"beta-aspartyl-N-acetylglucosaminidase activity","secondary_identifiers":["KEGG_REACTION:R01266","MetaCyc:3.2.2.11-RXN"],"synonyms":[{"name":"1-beta-aspartyl-N-acetyl-D-glucosaminylamine L-asparaginohydrolase activity","type":"related"},{"name":"beta-aspartylacetylglucosaminidase activity","type":"related"}],"termid":"GO:0047406"}


id: PBO:0064139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, membrane associated tyrosine/threonine 1","termid":"PBO:0064139"}


id: PBO:0062103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 1 pseudogene","termid":"PBO:0062103"}


id: GO:0046940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing one or more phosphate groups into a nucleoside monophosphate to produce a polyphosphorylated nucleoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}


id: PBO:0045312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl aminopeptidase","termid":"PBO:0045312"}


id: MONDO:0019436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Childhood arthritis typically associated with psoriasis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"},{"relation_name":"is_a","term_name":"psoriatic arthritis","termid":"MONDO:0011849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"psoriasis-related juvenile idiopathic arthritis","secondary_identifiers":["UMLS:C3714758","ICD10EXP:L40.5+","icd11.foundation:1473955563","NCIT:C114361","Orphanet:85436","SCTID:239802003","GARD:10970","MEDGEN:811463","EFO:0009733","ICD10EXP:M09.0*"],"synonyms":[{"name":"JPsA","type":"exact"},{"name":"juvenile psoriatic arthritis","type":"exact"},{"name":"psoriasis-related JIA","type":"exact"}],"termid":"MONDO:0019436","xrefs":{"Monarch":{"xref_id":"0019436"}}}


id: MONDO:0001140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Edwards syndrome (obsolete MONDO:0001140)","termid":"MONDO:0001140","xrefs":{"Monarch":{"xref_id":"0001140"}}}


id: FYPO:0000685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter occurs at a lower level of pheromone than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional response to pheromone at decreased pheromone level (obsolete FYPO:0000685)","synonyms":[{"name":"increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"increased transcriptional response to pheromone","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter by pheromones at decreased pheromone level","type":"exact"},{"name":"sensitive to pheromone","type":"related"}],"termid":"FYPO:0000685"}


id: MONDO:0020583
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012574"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 17 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C129438","MEDGEN:1380521","UMLS:C4329664"],"synonyms":[{"name":"chromosome 17 abnormality","type":"related"}],"termid":"MONDO:0020583","terms_by_termid":{"MONDO:0012574":null},"xrefs":{"Monarch":{"xref_id":"0020583"}}}


id: MONDO:0022573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"biliary atresia","termid":"MONDO:0008867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"biliary atresia intrahepatic non syndromic form","secondary_identifiers":["GARD:887"],"termid":"MONDO:0022573","xrefs":{"Monarch":{"xref_id":"0022573"}}}


id: PBO:0040316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit beta","termid":"PBO:0040316"}


id: GO:1990664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex formed by two or more subunits of Nkx-2.5. Nkx-2.5 is an evolutionary conserved transcription factor important for the specification and differentiation of cardiomyocytes during heart development. It is also required for spleen development. It binds DNA either as a monomer, or a homodimer, or a heterodimer complex to activate or inhibit expression of genes.","definition_xrefs":["PMID:22849347","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Nkx-2.5 complex","synonyms":[{"name":"NKX.2-5 homodimer complex","type":"related"},{"name":"NKX2.5 complex","type":"related"},{"name":"NKX2E homodimer complex","type":"related"},{"name":"Nkx-2.5 homodimer complex","type":"narrow"}],"termid":"GO:1990664"}


id: PBO:0042705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 4","termid":"PBO:0042705"}


id: GO:0008905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group from GTP or GDP to a mannose molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mannose-phosphate guanylyltransferase activity (obsolete GO:0008905)","termid":"GO:0008905"}


id: FYPO:0007425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion is normal (i.e. indistinguishably from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal gene conversion","synonyms":[{"name":"normal gene conversion during mitotic cell cycle","type":"related"},{"name":"normal gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0007425"}


id: PBO:0061697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein 1, transcriptional regulator","termid":"PBO:0061697"}


id: PBO:0056707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MELTF antisense RNA 1","termid":"PBO:0056707"}


id: PBO:0049191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 2","termid":"PBO:0049191"}


id: FYPO:0000682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a molecular function is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of molecular function","synonyms":[{"name":"abnormal regulation of molecular function during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of molecular function during vegetative growth","type":"exact"}],"termid":"FYPO:0000682"}


id: PBO:0059007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocyte to macrophage differentiation associated","termid":"PBO:0059007"}


id: MONDO:1012416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kurosawa and Kusanagi hypercholesterolaemia, non-human animal","termid":"MONDO:1011718"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kurosawa and Kusanagi hypercholesterolaemia, rabbit","secondary_identifiers":["OMIA:001567-9986"],"termid":"MONDO:1012416","xrefs":{"Monarch":{"xref_id":"1012416"}}}


id: GO:0046375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving K antigen, a capsular polysaccharide antigen carried on the surface of bacterial capsules that masks somatic (O) antigens.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"K antigen metabolic process","synonyms":[{"name":"K antigen metabolism","type":"exact"}],"termid":"GO:0046375"}


id: PBO:0071000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 2","termid":"PBO:0071000"}


id: SO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyldihydrouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyldihydrouridine","secondary_identifiers":["RNAMOD:093"],"synonyms":[{"name":"5-methyldihydrouridine","type":"exact"},{"name":"five methyldihydrouridine","type":"exact"},{"name":"m5D","type":"exact"}],"termid":"SO:0001376"}


id: PBO:0077956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 12-3","termid":"PBO:0077956"}


id: MOD:00977
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium containing modified residue","termid":"MOD:00747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disodium salt","termid":"MOD:00977"}


id: MONDO:0004287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pancreatic ductal adenocarcinoma characterized by the presence of adenocarcinoma cells with foamy cytoplasm.","definition_xrefs":["NCIT:C37256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic ductal adenocarcinoma","termid":"MONDO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic foamy gland adenocarcinoma","secondary_identifiers":["DOID:7577","UMLS:C1335303","MEDGEN:235450"],"synonyms":[{"name":"pancreatic foamy gland adenocarcinoma","type":"exact"}],"termid":"MONDO:0004287","xrefs":{"Monarch":{"xref_id":"0004287"}}}


id: PATO:0002192
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in a molecular entity by virtue of the molecule possessing no rings that are aromatic.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromaticity","termid":"PATO:0002190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-aromatic","termid":"PATO:0002192"}


id: PBO:0082573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase I; requires activation from zymogenic form in order to catalyze the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for repairing the chitin septum during cytokinesis; transcription activated by mating factor","termid":"PBO:0082573"}


id: MONDO:0006451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thymic carcinoma (TC) is a type of thymic epithelial neoplasm characterized by a high malignant potential.","definition_xrefs":["Orphanet:99868"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thymoma","termid":"MONDO:0006456"},{"relation_name":"is_a","term_name":"thymus cancer","termid":"MONDO:0002586"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"thymic epithelial neoplasm","termid":"MONDO:0018079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymic carcinoma","secondary_identifiers":["ICDO:8586/3","MedDRA:10061031","DOID:3284","EFO:1000576","NANDO:2200079","UMLS:C0205969","GARD:19695","icd11.foundation:1351671383","SCTID:444374006","NCIT:C7569","MEDGEN:60049","DOID:4554","ONCOTREE:THYC"],"synonyms":[{"name":"THYC","type":"related"},{"name":"carcinoma of thymus","type":"exact"},{"name":"malignant thymoma","type":"exact"},{"name":"thymic carcinoma","type":"exact"},{"name":"thymic carcinoma (excluding well differentiated thymic carcinoma)","type":"exact"},{"name":"thymic carcinoma excluding well differentiated thymic carcinoma","type":"exact"},{"name":"thymoma type C","type":"exact"},{"name":"thymoma, malignant","type":"exact"},{"name":"thymoma, malignant (morphologic abnormality)","type":"exact"},{"name":"thymoma, type C","type":"exact"},{"name":"thymoma, type C (morphologic abnormality)","type":"exact"},{"name":"thymus carcinoma","type":"exact"},{"name":"type C thymoma","type":"exact"}],"termid":"MONDO:0006451","xrefs":{"Monarch":{"xref_id":"0006451"}}}


id: GO:0002846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immune response to tumor cell","termid":"GO:0002840"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to tumor cell","termid":"GO:0002843"},{"relation_name":"is_a","term_name":"regulation of peripheral T cell tolerance induction","termid":"GO:0002849"},{"relation_name":"regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"}


id: PBO:0060901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuralized E3 ubiquitin protein ligase 4","termid":"PBO:0060901"}


id: PBO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Iec5","termid":"PBO:0001994"}


id: PBO:0061149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 1","termid":"PBO:0061149"}


id: MONDO:0028737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete biliary atresia disorder (obsolete MONDO:0028737)","secondary_identifiers":["HP:0005912","NANDO:1200913","NANDO:2200930","Orphanet:498345"],"termid":"MONDO:0028737","xrefs":{"Monarch":{"xref_id":"0028737"}}}


id: PBO:0057863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3174","termid":"PBO:0057863"}


id: MONDO:0019067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Steroid-sensitive nephrotic syndrome (SSNS) is a kidney disease defined by selective proteinuria, hypoalbuminaemia and, on renal biopsy, minimal changes without immunoglobulin deposits.","definition_xrefs":["Orphanet:69061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic nephrotic syndrome","termid":"MONDO:0018170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic steroid-sensitive nephrotic syndrome","secondary_identifiers":["GARD:16678"],"termid":"MONDO:0019067","xrefs":{"Monarch":{"xref_id":"0019067"}}}


id: PR:Q9USQ5-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9USQ5-1.","definition_xrefs":["UniProtKB:Q9USQ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9USQ5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme isoform 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9USQ5-1"],"synonyms":[{"name":"Spom972h-spa1/iso:1","type":"exact"}],"termid":"PR:Q9USQ5-1"}


id: GO:0042361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of menaquinones, any of the quinone-derived compounds synthesized by intestinal bacteria. Structurally, menaquinones consist of a methylated naphthoquinone ring structure and side chains composed of a variable number of unsaturated isoprenoid residues. Menaquinones have vitamin K activity and are known as vitamin K2.","definition_xrefs":["GOC:jl","PMID:37938463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menaquinone metabolic process","termid":"GO:0009233"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"menaquinone catabolic process","synonyms":[{"name":"menaquinone breakdown","type":"exact"},{"name":"menaquinone catabolism","type":"exact"},{"name":"menaquinone degradation","type":"exact"},{"name":"menatetrenone catabolic process","type":"exact"},{"name":"menatetrenone catabolism","type":"exact"},{"name":"multiprenylmenaquinone catabolic process","type":"exact"},{"name":"multiprenylmenaquinone catabolism","type":"exact"},{"name":"vitamin K2 catabolic process","type":"exact"},{"name":"vitamin K2 catabolism","type":"exact"}],"termid":"GO:0042361"}


id: GO:0098861
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A parallel bundle of actin filaments that is part of filopodium. Filaments are oriented such that the plus (barbed) ends are at the tip of the protrusion, capped by a tip complex.","definition_xrefs":["PMID:12566431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin filament bundle of filopodium","termid":"GO:0098861"}


id: PBO:0085543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; least basic of non-acidic ribosomal proteins; phosphorylated in vivo; essential for viability; homologous to mammalian ribosomal protein S5 and bacterial S7","termid":"PBO:0085543"}


id: PBO:0038889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 2","termid":"PBO:0038889"}


id: GO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading up to expression of the pre-B cell receptor on the surface of pre-B cells, starting with the recombination of an immunuglobulin heavy chain locus, including expression of the surrogate light chain, the association of the surrogate light chain with the heavy chain, and expression of the complete pre-B cell receptor on the cell surface. pre-B cell receptor expression is a key checkpoint in the transition of pro-B cell to pre-B cell.","definition_xrefs":["PMID:22949502","PMID:9834086","PMID:15263090","GOC:jal","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"pre-B cell differentiation","termid":"GO:0002329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-B cell receptor expression","termid":"GO:0002330"}


id: GO:0008554
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111487],"is_not":false,"summary":null,"term":"GO:0008554"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out); by a phosphorylative mechanism.","definition_xrefs":["PMID:9224683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"P-type sodium transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.3"],"synonyms":[{"name":"Na(+)-exporting ATPase activity","type":"broad"},{"name":"Na(+)-transporting ATPase activity","type":"broad"},{"name":"Na+-exporting ATPase activity","type":"broad"},{"name":"Na+-transporting ATPase activity","type":"broad"},{"name":"sodium exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transport ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0008554","terms_by_termid":{"GO:0008554":null}}


id: PBO:0086782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum, while the mCherry fusion protein localizes to the vacuole","termid":"PBO:0086782"}


id: FYPO:0003710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a pear, and has a larger volume than normal, in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pear-shaped vegetative cell","termid":"FYPO:0001120"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"swollen pear-shaped vegetative cell","synonyms":[{"name":"swollen ice cream cone-shaped cell during vegetative growth","type":"exact"},{"name":"swollen pear-shaped cell during vegetative growth","type":"exact"},{"name":"swollen pear-shaped vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003710"}


id: MONDO:0020004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare eye disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare eye disease (obsolete MONDO:0020004)","secondary_identifiers":["Orphanet:97966"],"synonyms":[{"name":"rare eye disease","type":"exact"}],"termid":"MONDO:0020004","xrefs":{"Monarch":{"xref_id":"0020004"}}}


id: PATO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan colour and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated cyan","synonyms":[{"name":"pale cyan","type":"exact"}],"termid":"PATO:0001270"}


id: PBO:0051971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts with SUPT6H, CTD assembly factor 1","termid":"PBO:0051971"}


id: GO:0071592
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107656],"is_not":false,"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinic acid riboside, the product of the formation of a glycosidic bond between ribose and nicotinic acid.","definition_xrefs":["PMID:19846558","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside biosynthetic process","termid":"GO:0071589"},{"relation_name":"is_a","term_name":"nicotinic acid riboside metabolic process","termid":"GO:0071591"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nicotinic acid riboside biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-ribosylnicotinic acid biosynthetic process","type":"exact"},{"name":"nicotinic acid riboside anabolism","type":"exact"},{"name":"nicotinic acid riboside biosynthesis","type":"exact"},{"name":"nicotinic acid riboside formation","type":"exact"},{"name":"nicotinic acid riboside synthesis","type":"exact"}],"termid":"GO:0071592","terms_by_termid":{"GO:0071592":null}}


id: GO:0047339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexose 1-phosphate + nucleoside triphosphate = NDP-hexose + diphosphate.","definition_xrefs":["MetaCyc:2.7.7.28-RXN","EC:2.7.7.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"nucleoside-triphosphate-hexose-1-phosphate nucleotidyltransferase activity","secondary_identifiers":["GO:0047340"],"synonyms":[{"name":"GDP hexose pyrophosphorylase activity","type":"narrow"},{"name":"GTP:alpha-D-hexose-1-phosphate guanylyltransferase activity","type":"narrow"},{"name":"GTP:hexose-1-phosphate guanylyltransferase activity","type":"narrow"},{"name":"NDP hexose pyrophosphorylase activity","type":"related"},{"name":"NDP-hexose diphosphorylase activity","type":"exact"},{"name":"NDP-hexose pyrophosphorylase activity","type":"exact"},{"name":"NTP:alpha-D-aldose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"NTP:hexose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"guanosine diphosphohexose pyrophosphorylase activity","type":"narrow"},{"name":"hexose 1-phosphate guanylyltransferase activity","type":"related"},{"name":"hexose 1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"hexose nucleotidylating enzyme activity","type":"related"},{"name":"hexose-1-phosphate guanylyltransferase activity","type":"narrow"},{"name":"nucleoside diphosphohexose pyrophosphorylase activity","type":"related"},{"name":"nucleoside-triphosphate-aldose-1-phosphate nucleotidyltransferase activity","type":"related"}],"termid":"GO:0047339"}


id: GO:0050860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell receptor signaling pathway","termid":"GO:0050856"},{"relation_name":"is_a","term_name":"negative regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050858"},{"relation_name":"negatively_regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell receptor signaling pathway","synonyms":[{"name":"down regulation of T cell receptor signaling pathway","type":"exact"},{"name":"down-regulation of T cell receptor signaling pathway","type":"exact"},{"name":"downregulation of T cell receptor signaling pathway","type":"exact"},{"name":"inhibition of T cell receptor signaling pathway","type":"narrow"},{"name":"negative regulation of T cell receptor signalling pathway","type":"exact"},{"name":"negative regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"negative regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"negative regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"negative regulation of TCR signaling pathway","type":"exact"}],"termid":"GO:0050860"}


id: GO:0004095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine.","definition_xrefs":["EC:2.3.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine O-acyltransferase activity","termid":"GO:0016406"},{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"carnitine O-palmitoyltransferase activity","secondary_identifiers":["RHEA:12661","MetaCyc:CARNITINE-O-PALMITOYLTRANSFERASE-RXN","Reactome:R-HSA-200406","Reactome:R-HSA-200410","Reactome:R-HSA-9911362"],"synonyms":[{"name":"CPT","type":"related"},{"name":"CPT I (outer membrane carnitine palmitoyl transferase)","type":"related"},{"name":"CPT-A","type":"related"},{"name":"CPT-B","type":"related"},{"name":"CPTi","type":"related"},{"name":"CPTo","type":"related"},{"name":"L-carnitine palmitoyltransferase activity","type":"related"},{"name":"acylcarnitine transferase activity","type":"related"},{"name":"carnitine palmitoyltransferase I","type":"related"},{"name":"carnitine palmitoyltransferase II","type":"related"},{"name":"carnitine palmitoyltransferase activity","type":"related"},{"name":"carnitine palmitoyltransferase-A","type":"related"},{"name":"outer malonyl-CoA inhibitable carnitine palmitoyltransferase activity","type":"related"},{"name":"palmitoyl-CoA:L-carnitine O-palmitoyltransferase activity","type":"related"},{"name":"palmitoylcarnitine transferase activity","type":"related"}],"termid":"GO:0004095"}


id: MONDO:0800149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any commonn variable immunodeficiency in which the cause of the disease is an autosomal recessive variation in the TNFS13 gene.","definition_xrefs":["PMID:32298700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, due to APRIL deficiency","termid":"MONDO:0800149","xrefs":{"Monarch":{"xref_id":"0800149"}}}


id: PBO:0036384
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by mouse SPS1","termid":"PBO:0036384"}


id: GO:2000937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellotriose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cellotriose metabolic process","termid":"GO:2000934"},{"relation_name":"is_a","term_name":"regulation of cellotriose catabolic process","termid":"GO:2000936"},{"relation_name":"negatively_regulates","term_name":"cellotriose catabolic process","termid":"GO:2000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cellotriose catabolic process","synonyms":[{"name":"negative regulation of cellotriose catabolism","type":"exact"}],"termid":"GO:2000937"}


id: PBO:0044556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DARS1 antisense RNA 1","termid":"PBO:0044556"}


id: GO:0097051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the endoplasmic reticulum membrane.","definition_xrefs":["PMID:9388185","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to endoplasmic reticulum","termid":"GO:0072599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to endoplasmic reticulum membrane","synonyms":[{"name":"establishment of protein localisation in endoplasmic reticulum membrane","type":"exact"},{"name":"establishment of protein localization in endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0097051"}


id: PBO:0086851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of protein phosphatase Glc7p; involved in glycogen metabolism; contains a conserved motif (GVNK motif) that is also found in Gac1p, Pig1p, and Pig2p; GIP2 has a paralog, PIG2, that arose from the whole genome duplication","termid":"PBO:0086851"}


id: MONDO:0021140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of a disease in which the disease is present at birth, regardless of cause.","definition_xrefs":["Wikipedia:Birth_defect"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital or acquired","termid":"MONDO:0021139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital","secondary_identifiers":["icd11.foundation:1048408993"],"synonyms":[{"name":"inborn","type":"exact"}],"termid":"MONDO:0021140","xrefs":{"Monarch":{"xref_id":"0021140"}}}


id: MONDO:0015768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 5p is a chromosomal abnormality resulting from the duplication of a segment of variable size of the short arm of chromosome 5, which usually involves the distal band 5p15. The clinical presentation is variable but is always associated with severe intellectual deficit.","definition_xrefs":["Orphanet:1742"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of the short arm of chromosome 5","termid":"MONDO:0016942"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 5p","secondary_identifiers":["MEDGEN:1672500","UMLS:C0812464","NORD:957","GARD:6093"],"synonyms":[{"name":"5p duplication","type":"related"},{"name":"5p trisomy","type":"related"},{"name":"Chromosome 5, Trisomy 5p","type":"exact"},{"name":"Duplication 5p","type":"exact"},{"name":"Duplication of the short arm of chromosome 5","type":"exact"},{"name":"chromosome 5p duplication","type":"related"},{"name":"partial trisomy 5p","type":"related"},{"name":"trisomy of the short arm of chromosome 5","type":"exact"},{"name":"trisomy type 5p","type":"exact"}],"termid":"MONDO:0015768","xrefs":{"Monarch":{"xref_id":"0015768"}}}


id: PBO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 9","termid":"PBO:0044239"}


id: PBO:0062928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase 1","termid":"PBO:0062928"}


id: MONDO:0009294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver phosphorylase deficiency, or glycogen storage disease type 6b (Hers' disease, GSD 6b) is a benign and rare form of glycogen storage disease.","definition_xrefs":["Orphanet:369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease VI","secondary_identifiers":["DOID:2754","NORD:1241","UMLS:C0017925","MedDRA:10053240","MEDGEN:6643","GARD:6529","NANDO:1200846","NANDO:2200542","OMIM:232700","MESH:D006013","NCIT:C126875","SCTID:29291001"],"synonyms":[{"name":"GSD 6","type":"related"},{"name":"GSD due to liver glycogen phosphorylase deficiency","type":"exact"},{"name":"GSD type 6","type":"exact"},{"name":"GSD type VI","type":"exact"},{"name":"GSD6","type":"related"},{"name":"Glycogen Storage Disease Type VI","type":"exact"},{"name":"PYGL glycogen storage disease","type":"exact"},{"name":"glycogen storage disease 6","type":"related"},{"name":"glycogen storage disease VI","type":"exact"},{"name":"glycogen storage disease caused by mutation in PYGL","type":"exact"},{"name":"glycogen storage disease due to liver glycogen phosphorylase deficiency","type":"related"},{"name":"glycogen storage disease type 6","type":"exact"},{"name":"glycogen storage disease type VI","type":"exact"},{"name":"glycogenosis due to liver glycogen phosphorylase deficiency","type":"exact"},{"name":"glycogenosis type 6","type":"exact"},{"name":"glycogenosis type VI","type":"exact"},{"name":"hepatic glycogen phosphorylase deficiency","type":"exact"},{"name":"hepatic phosphorylase deficiency","type":"exact"},{"name":"hepatophosphorylase deficiency glycogenosis","type":"exact"},{"name":"hers disease","type":"exact"},{"name":"hers' disease","type":"exact"},{"name":"liver glycogen phosphorylase deficiency","type":"exact"},{"name":"phosphorylase deficiency glycogen-storage disease of liver","type":"related"}],"termid":"MONDO:0009294","xrefs":{"Monarch":{"xref_id":"0009294"}}}


id: PBO:0068666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 47, pseudogene","termid":"PBO:0068666"}


id: MONDO:0013029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"cerebellar ataxia type 9","secondary_identifiers":["DOID:0111747","MEDGEN:854704","OMIM:612876","UMLS:C3887996"],"synonyms":[{"name":"SCA9","type":"related"},{"name":"cerebellar ataxia type 9","type":"exact"},{"name":"spinocerebellar ataxia 9","type":"related"},{"name":"spinocerebellar ataxia type 9","type":"related"}],"termid":"MONDO:0013029","xrefs":{"Monarch":{"xref_id":"0013029"}}}


id: PBO:0013823
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CYR1","termid":"PBO:0013823"}


id: GO:0047151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + tRNA containing uridine at position 54 + FADH + H+ = tetrahydrofolate + tRNA containing ribothymidine at position 54 + FAD+.","definition_xrefs":["MetaCyc:2.1.1.74-RXN","EC:2.1.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"tRNA (uracil(54)-C5)-methyltransferase activity, 5,10-methylenetetrahydrofolate-dependent","secondary_identifiers":["KEGG_REACTION:R03704","RHEA:16873"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:tRNA (uracil-5-)-methyltransferase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:tRNA-UPsiC (uracil-5-)-methyl-transferase activity","type":"related"},{"name":"folate-dependent ribothymidyl synthase activity","type":"related"},{"name":"methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH-oxidizing) activity","type":"exact"},{"name":"methylenetetrahydrofolate-transfer ribonucleate uracil 5-methyltransferase activity","type":"related"},{"name":"tRNA (uracil(54)-C(5))-methyltransferase activity, 5,10-methylenetetrahydrofolate-dependent","type":"exact"}],"termid":"GO:0047151"}


id: GO:0102279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an 11-cis retinol-[cellular-retinol-binding-protein] + a phosphatidylcholine = a cellular-retinol-binding protein + an 11-cis-retinyl ester + a 1-lysophosphatidylcholine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lecithin:11-cis retinol acyltransferase activity (obsolete GO:0102279)","termid":"GO:0102279"}


id: MONDO:0006040
data:
  {"annotated_genes":["SJAG_01524","SJAG_00547"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[86443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009504"}]},"cv_name":"mondo","definition":"Metabolic acidosis characterized by the accumulation of lactate in the body. It is caused by tissue hypoxia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00547":null,"SJAG_01524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"lactic acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:91273001","EFO:1000036","UMLS:C0001125","MEDGEN:1717","MESH:D000140"],"termid":"MONDO:0006040","terms_by_termid":{"MONDO:0009504":null,"MONDO:0012557":null},"xrefs":{"Monarch":{"xref_id":"0006040"}}}


id: PBO:0045328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK6 antisense RNA 1","termid":"PBO:0045328"}


id: FYPO:0001757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased protein phosphatase activity","synonyms":[{"name":"decreased phosphoprotein phosphatase activity","type":"exact"},{"name":"reduced protein phosphatase activity","type":"exact"}],"termid":"FYPO:0001757"}


id: PR:Q09793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleoporin p58/p45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.09c","secondary_identifiers":["UniProtKB:Q09793"],"synonyms":[{"name":"Spom972h-NUPL1","type":"exact"},{"name":"nuclear pore protein nup45 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09793"}


id: GO:2000613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"is_a","term_name":"regulation of thyroid-stimulating hormone secretion","termid":"GO:2000612"},{"relation_name":"negatively_regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"negative regulation of TSH secretion","type":"exact"},{"name":"negative regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000613"}


id: PBO:0059378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 3","termid":"PBO:0059378"}


id: MONDO:0044916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rhabdoid tumor which arises in the soft tissues. It occurs in infants and children and may be associated with loss of chromosome 22. It is characterized by the presence of cells with a large eccentric nucleus, prominent nucleolus, and abundant cytoplasm.","definition_xrefs":["NCIT:C6586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid tumor","termid":"MONDO:0002728"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extrarenal rhabdoid tumor","secondary_identifiers":["MEDGEN:224918","UMLS:C1304517","SCTID:404089007"],"synonyms":[{"name":"extrarenal rhabdoid tumor","type":"exact"},{"name":"malignant extrarenal rhabdoid neoplasm","type":"exact"},{"name":"rhabdoid tumor of soft tissue","type":"exact"},{"name":"rhabdoid tumour of soft tissue","type":"exact"}],"termid":"MONDO:0044916","xrefs":{"Monarch":{"xref_id":"0044916"}}}


id: MONDO:0005814
data:
  {"annotated_genes":["SJAG_04699","SJAG_02426","SJAG_02187","SJAG_02748","SJAG_01082","SJAG_00980","SJAG_04206","SJAG_03453","SJAG_04394","SJAG_01620","SJAG_01837","SJAG_02231","SJAG_02226"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85706,85711,85705,85710,85707,86556,85708,85709,85704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[85596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[84417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[84867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[84869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[84880,84879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the intestine","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"intestinal neoplasm","termid":"MONDO:0021118"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"intestinal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0007330","DOID:10155","MESH:D007414","NCIT:C4572","UMLS:C0346627","SCTID:363508008","MEDGEN:87562","ICD9:159.0"],"synonyms":[{"name":"bowel cancer","type":"exact"},{"name":"cancer of intestine","type":"exact"},{"name":"cancer of the intestine","type":"exact"},{"name":"intestinal cancer","type":"exact"},{"name":"intestinal neoplasms, malignant","type":"exact"},{"name":"intestinal tumors, malignant","type":"exact"},{"name":"intestine cancer","type":"exact"},{"name":"malignant intestinal neoplasm","type":"exact"},{"name":"malignant intestinal neoplasms","type":"exact"},{"name":"malignant intestinal tumor","type":"exact"},{"name":"malignant intestinal tumors","type":"exact"},{"name":"malignant intestinal tumour","type":"exact"},{"name":"malignant intestinal tumours","type":"exact"},{"name":"malignant intestine neoplasm","type":"exact"},{"name":"malignant intestine tumor","type":"exact"},{"name":"malignant intestine tumour","type":"exact"},{"name":"malignant neoplasm of intestine","type":"exact"},{"name":"malignant neoplasm of the intestine","type":"exact"},{"name":"malignant tumor of intestine","type":"exact"},{"name":"malignant tumor of the intestine","type":"exact"},{"name":"malignant tumour of intestine","type":"exact"},{"name":"malignant tumour of the intestine","type":"exact"}],"termid":"MONDO:0005814","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0005814"}}}


id: PBO:0067296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 381, pseudogene","termid":"PBO:0067296"}


id: PBO:0003429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug57","termid":"PBO:0003429"}


id: PR:O74503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spp27 gene.","definition_xrefs":["UniProtKB:O74503","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream activation factor subunit spp27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.17","synonyms":[{"name":"Spom972h-spp27","type":"exact"},{"name":"p27 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"p30 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"upstream activation factor 27 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor 30 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor subunit uaf30 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74503"}


id: MONDO:0005852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the left atrioventricular mitral orifice.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disorder","termid":"MONDO:0003767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mitral valve stenosis","secondary_identifiers":["MEDGEN:44466","NANDO:1200963","SCTID:79619009","UMLS:C0026269","EFO:0007372","DOID:1754","icd11.foundation:2115139779","MESH:D008946","NANDO:2200302","NCIT:C50654"],"synonyms":[{"name":"mitral stenoses","type":"related"},{"name":"mitral stenosis","type":"exact"},{"name":"mitral valve stenoses","type":"related"},{"name":"stenoses, mitral","type":"related"},{"name":"stenoses, mitral valve","type":"related"},{"name":"stenosis, mitral","type":"related"},{"name":"stenosis, mitral valve","type":"related"},{"name":"valve stenoses, mitral","type":"related"},{"name":"valve stenosis, mitral","type":"related"}],"termid":"MONDO:0005852","xrefs":{"Monarch":{"xref_id":"0005852"}}}


id: PBO:0051564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12 receptor subunit beta 1","termid":"PBO:0051564"}


id: GO:0045839
data:
  {"annotated_genes":["SJAG_02336","SJAG_02169","SJAG_04699","SJAG_03353","SJAG_03126","SJAG_04259","SJAG_02451","SJAG_01837","SJAG_01679","SJAG_00883","SJAG_01297","SJAG_03681","SJAG_04126","SJAG_01082","SJAG_01330","SJAG_04999","SJAG_04884"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106393,89932,103069,98782,107405,111101,112911,115034,113401],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[105479,115805,100982,114689,112915,98626,89934,113634,109061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[114690,105480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[93399],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[115809],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[93400],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mitosis. Mitosis is the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic nuclear division","termid":"GO:0007088"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"negative regulation of nuclear division","termid":"GO:0051784"},{"relation_name":"negatively_regulates","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitosis","type":"exact"},{"name":"down-regulation of mitosis","type":"exact"},{"name":"downregulation of mitosis","type":"exact"},{"name":"inhibition of mitosis","type":"narrow"},{"name":"negative regulation of mitosis","type":"exact"}],"termid":"GO:0045839","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: MONDO:0024560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus arteriosus","termid":"MONDO:0011827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"PDA1","secondary_identifiers":["OMIM:607411","UMLS:C4282128","GARD:7342","MEDGEN:924232"],"synonyms":[{"name":"PDA","type":"related"},{"name":"PDA1","type":"exact"},{"name":"patent ductus arteriosus 1","type":"related"},{"name":"patent ductus arteriosus, susceptibility to","type":"exact"}],"termid":"MONDO:0024560","xrefs":{"Monarch":{"xref_id":"0024560"}}}


id: PBO:0064737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 73","termid":"PBO:0064737"}


id: GO:0141064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that contributes to the onset of de novo transcription from the zygotic genome as part of the maternal-to-zygote transition in gene expression. The zygote overcomes the silencing that has been established. The cause of this silencing could be due to several factors: chromatin modifications leading to repression, or lack of adequate transcription machinery.","definition_xrefs":["PMID:19204068","PMID:20808952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"part_of","term_name":"maternal-to-zygotic transition of gene expression","termid":"GO:0160021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"zygotic genome activation","synonyms":[{"name":"ZGA","type":"broad"}],"termid":"GO:0141064"}


id: GO:1902006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proline biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23415322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proline biosynthetic process","termid":"GO:1902005"},{"relation_name":"is_a","term_name":"negative regulation of proline metabolic process","termid":"GO:2000215"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"proline biosynthetic process","termid":"GO:0006561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proline biosynthetic process","synonyms":[{"name":"down regulation of proline anabolism","type":"exact"},{"name":"down regulation of proline biosynthesis","type":"exact"},{"name":"down regulation of proline biosynthetic process","type":"exact"},{"name":"down regulation of proline formation","type":"exact"},{"name":"down regulation of proline synthesis","type":"exact"},{"name":"down-regulation of proline anabolism","type":"exact"},{"name":"down-regulation of proline biosynthesis","type":"exact"},{"name":"down-regulation of proline biosynthetic process","type":"exact"},{"name":"down-regulation of proline formation","type":"exact"},{"name":"down-regulation of proline synthesis","type":"exact"},{"name":"downregulation of proline anabolism","type":"exact"},{"name":"downregulation of proline biosynthesis","type":"exact"},{"name":"downregulation of proline biosynthetic process","type":"exact"},{"name":"downregulation of proline formation","type":"exact"},{"name":"downregulation of proline synthesis","type":"exact"},{"name":"inhibition of proline anabolism","type":"exact"},{"name":"inhibition of proline biosynthesis","type":"exact"},{"name":"inhibition of proline biosynthetic process","type":"narrow"},{"name":"inhibition of proline formation","type":"exact"},{"name":"inhibition of proline synthesis","type":"exact"},{"name":"negative regulation of proline anabolism","type":"exact"},{"name":"negative regulation of proline biosynthesis","type":"exact"},{"name":"negative regulation of proline formation","type":"exact"},{"name":"negative regulation of proline synthesis","type":"exact"}],"termid":"GO:1902006"}


id: GO:0102903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = gamma-terpinene + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:32559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gamma-terpinene synthase activity","secondary_identifiers":["EC:4.2.3.114","MetaCyc:RXN-8547"],"termid":"GO:0102903"}


id: PBO:0005674
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.7.3.3","termid":"PBO:0005674"}


id: GO:0045270
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the plasma membrane-associated Fo proteins; rotates within the catalytic core during catalysis. Examples of this component are found in Bacterial species.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase, central stalk (obsolete GO:0045270)","synonyms":[{"name":"hydrogen-transporting ATP synthase, central stalk","type":"broad"},{"name":"proton-transporting ATP synthase, central stalk","type":"broad"}],"termid":"GO:0045270"}


id: GO:0042566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, membrane-bounded organelle found in some anaerobic protozoa, which participates in ATP and molecular hydrogen formation.","definition_xrefs":["GOC:jl","PMID:11293569","PMID:11197234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"hydrogenosome","secondary_identifiers":["Wikipedia:Hydrogenosome"],"termid":"GO:0042566"}


id: PBO:0062716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily M member 1","termid":"PBO:0062716"}


id: GO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephron are generated and organized. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron morphogenesis","termid":"GO:0072028"}


id: MONDO:0003312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of rare neoplasms that arise from the ovary. It includes low grade endometrioid stromal sarcoma and undifferentiated sarcoma.","definition_xrefs":["NCIT:C40065"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian sarcoma","termid":"MONDO:0002225"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"},{"relation_name":"is_a","term_name":"endometrioid stromal and related neoplasms","termid":"MONDO:0037742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometrioid stromal and related neoplasms","secondary_identifiers":["MEDGEN:926076","DOID:5169","UMLS:C4288544"],"synonyms":[{"name":"endometrioid stromal and related neoplasms of ovary","type":"exact"},{"name":"ovarian endometrioid stromal and related neoplasms","type":"exact"},{"name":"ovarian endometrioid stromal sarcoma","type":"related"},{"name":"ovary endometrioid stromal and related neoplasms","type":"exact"}],"termid":"MONDO:0003312","xrefs":{"Monarch":{"xref_id":"0003312"}}}


id: MONDO:0018695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of domestic and wild fowl and other birds with influenza A virus. Avian influenza usually does not sicken birds, but can be highly pathogenic and fatal in domestic poultry.","definition_xrefs":["MESH:D005585"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"influenza","termid":"MONDO:0005812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avian influenza","secondary_identifiers":["DOID:4492","EFO:0005222","GARD:21897","Orphanet:454836","UMLS:C0016627","MEDGEN:42091","SCTID:55604004"],"synonyms":[{"name":"avian flu","type":"exact"},{"name":"bird flu","type":"exact"}],"termid":"MONDO:0018695","xrefs":{"Monarch":{"xref_id":"0018695"}}}


id: MONDO:0020637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to a partial deficiency","termid":"MONDO:0020637","xrefs":{"Monarch":{"xref_id":"0020637"}}}


id: SO:0001341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"4_demethylwyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_demethylwyosine","secondary_identifiers":["RNAMOD:100"],"synonyms":[{"name":"4-demethylwyosine","type":"exact"},{"name":"four demethylwyosine","type":"exact"},{"name":"imG-14","type":"exact"}],"termid":"SO:0001341"}


id: PBO:0084986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent glutamate dehydrogenase; synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh1p; expression regulated by nitrogen and carbon sources; GDH3 has a paralog, GDH1, that arose from the whole genome duplication","termid":"PBO:0084986"}


id: SO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological_region characterized as a single heritable trait in a phenotype screen. The heritable phenotype may be mapped to a chromosome but generally has not been characterized to a specific gene locus.","definition_xrefs":["JAX:hdene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heritable_phenotypic_marker","synonyms":[{"name":"heritable phenotypic marker","type":"exact"},{"name":"phenotypic marker","type":"exact"}],"termid":"SO:0001500"}


id: GO:0042915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of group A colicins (colicins E1, E2, E3, A, K, and N) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:9171417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colicin transport","termid":"GO:0042914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"group A colicin transport","termid":"GO:0042915"}


id: PBO:0080004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 antisense RNA 1","termid":"PBO:0080004"}


id: FYPO:0006932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of butylated hydroxyanisole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to butylated hydroxyanisole","synonyms":[{"name":"resistance to BHA","type":"exact"},{"name":"resistance to butylated hydroxyanisole during mitotic cell cycle","type":"related"},{"name":"resistance to butylated hydroxyanisole during vegetative growth","type":"exact"},{"name":"resistant to BHA","type":"exact"},{"name":"resistant to butylated hydroxyanisole","type":"exact"}],"termid":"FYPO:0006932"}


id: PBO:0068041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 346","termid":"PBO:0068041"}


id: PBO:0044951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desert hedgehog signaling molecule","termid":"PBO:0044951"}


id: GO:0014741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle hypertrophy","termid":"GO:0014741"}


id: PR:O42873
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc201 gene.","definition_xrefs":["UniProtKB:O42873","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase C3G9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.11c","synonyms":[{"name":"Spom972h-pdc201","type":"exact"}],"termid":"PR:O42873"}


id: PBO:0029372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029372"}


id: FYPO:0000215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which intracellular protein transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal intracellular protein transport during vegetative growth","synonyms":[{"name":"abnormal intracellular protein transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000215"}


id: FYPO:0000645
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04280:allele-3":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118480,118481,118698,118484],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell has an abnormally low volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell","termid":"FYPO:0000023"},{"relation_name":"is_a","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02013":null,"SJAG_03048":null,"SJAG_04280":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"small vegetative cell","references_by_uniquename":{"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_02013","SJAG_04280"],"single_locus_genotype_uniquenames":["pyp1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased vegetative cell size","type":"exact"},{"name":"reduced vegetative cell size","type":"exact"}],"termid":"FYPO:0000645","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0030035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a microspike, a dynamic, actin-rich projection extending from the surface of a migrating animal cell.","definition_xrefs":["PMID:12153987","ISBN:0815316194","PMID:19095735","PMID:11429692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"microspike assembly","synonyms":[{"name":"microspike biogenesis","type":"related"},{"name":"microspike biosynthesis","type":"exact"},{"name":"microspike formation","type":"exact"}],"termid":"GO:0030035"}


id: MONDO:1010489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, dog","secondary_identifiers":["OMIA:001041-9615"],"termid":"MONDO:1010489","xrefs":{"Monarch":{"xref_id":"1010489"}}}


id: PBO:0016049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpp40 (predicted)","termid":"PBO:0016049"}


id: PBO:0048835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 2 pseudogene 1","termid":"PBO:0048835"}


id: PATO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of whether the bearer forms a bundle of anatomical fibers, as of muscle or nerve.","definition_xrefs":["answers.com:http://www.answers.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation","termid":"PATO:0002013"}


id: PBO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb6","termid":"PBO:0090692"}


id: MONDO:0017214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitamin B12-responsive methylmalonic acidemia (MA) is an inborn error of vitamin B12 (cobalamin) metabolism characterized by recurrent ketoacidotic comas or transient vomiting, dehydration, hypotonia and intellectual deficit, which responds to vitamin B12. There are three types: cblA, cblB and cblD-variant 2 (cblDv2).","definition_xrefs":["Orphanet:28"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"vitamin B12-responsive methylmalonic acidemia","secondary_identifiers":["SCTID:69614003","UMLS:C0342720","MEDGEN:575193","GARD:12623"],"synonyms":[{"name":"adenosylcobalamin deficiency","type":"exact"},{"name":"vitamin B12-responsive methylmalonic aciduria","type":"exact"}],"termid":"MONDO:0017214","xrefs":{"Monarch":{"xref_id":"0017214"}}}


id: GO:0046022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter during mitotic cell cycle (obsolete GO:0046022)","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter during mitosis","type":"narrow"},{"name":"mitotic activation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter during mitosis","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, mitotic","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter during mitosis","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"}],"termid":"GO:0046022"}


id: PBO:0067894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 196","termid":"PBO:0067894"}


id: PBO:0066080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 8","termid":"PBO:0066080"}


id: PBO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINc domain","termid":"PBO:0001933"}


id: PBO:0058284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4660","termid":"PBO:0058284"}


id: PR:Q09911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30D11.14c gene.","definition_xrefs":["UniProtKB:Q09911","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30D11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.14c","synonyms":[{"name":"Spom972h-SPAC30D11.14c","type":"exact"}],"termid":"PR:Q09911"}


id: GO:0047371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + butanoyl-CoA = acetoacetyl-CoA + butanoate.","definition_xrefs":["RHEA:12961","EC:2.8.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"butyrate-acetoacetate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.9-RXN","KEGG_REACTION:R01365"],"synonyms":[{"name":"butanoyl-CoA:acetoacetate CoA-transferase activity","type":"related"},{"name":"butyryl coenzyme A-acetoacetate coenzyme A-transferase activity","type":"related"},{"name":"butyryl-CoA-acetoacetate CoA-transferase activity","type":"related"}],"termid":"GO:0047371"}


id: PBO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydantoin racemase family (predicted)","termid":"PBO:0002429"}


id: PBO:0081585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 512B","termid":"PBO:0081585"}


id: GO:0004151
data:
  {"annotated_genes":["SJAG_00444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88661],"is_not":false,"summary":null,"term":"GO:0004151"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + H2O = N-carbamoyl-L-aspartate + H+.","definition_xrefs":["EC:3.5.2.3","RHEA:24296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydroorotase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DIHYDROOROT-RXN","KEGG_REACTION:R01993","Reactome:R-HSA-73571"],"synonyms":[{"name":"(S)-dihydroorotate amidohydrolase activity","type":"related"},{"name":"DHOase activity","type":"related"},{"name":"carbamoylaspartic dehydrase activity","type":"related"},{"name":"dihydroorotate hydrolase activity","type":"related"}],"termid":"GO:0004151","terms_by_termid":{"GO:0004151":null}}


id: PBO:0043549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type III alpha 1 chain","termid":"PBO:0043549"}


id: PR:Q9P7X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- frg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7X3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein frg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.12","synonyms":[{"name":"Spom972h-frg1","type":"exact"}],"termid":"PR:Q9P7X3"}


id: PBO:0061342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1","termid":"PBO:0061342"}


id: GO:0048450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of floral organs. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:PO_curators","PO:0025395","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"flower structural organization","termid":"GO:0048461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ structural organization","secondary_identifiers":["GO:0048435"],"synonyms":[{"name":"floral organ structural organisation","type":"exact"}],"termid":"GO:0048450"}


id: GO:0090298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA replication","termid":"GO:0090296"},{"relation_name":"is_a","term_name":"negative regulation of mitochondrial DNA metabolic process","termid":"GO:1901859"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA replication","synonyms":[{"name":"negative regulation of mitochondrial DNA synthesis","type":"related"}],"termid":"GO:0090298"}


id: MONDO:0015008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 1","termid":"MONDO:0015047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, type 1J","secondary_identifiers":["OMIM:617297","EFO:0009302","MEDGEN:934597","UMLS:C4310630","DOID:0080953","GARD:16220"],"synonyms":[{"name":"AI1J","type":"related"},{"name":"amelogenesis imperfecta, type 1J","type":"exact"},{"name":"amelogenesis imperfecta, type Ij","type":"exact"}],"termid":"MONDO:0015008","xrefs":{"Monarch":{"xref_id":"0015008"}}}


id: PBO:0113311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial function; interacts with Hsp82p and copurifies with Ipl1p; expression is copper responsive and downregulated in strains deleted for MAC1, a copper-responsive transcription factor; role in preventing L-A mycovirus pathogenesis; human homolog MYG1 is linked to developmental processes and dermatological diseases, complements yeast null mutant","termid":"PBO:0113311"}


id: PBO:0070388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1 like","termid":"PBO:0070388"}


id: GO:0046244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid metabolic process","termid":"GO:0009696"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"salicylic acid catabolic process","synonyms":[{"name":"salicylic acid breakdown","type":"exact"},{"name":"salicylic acid catabolism","type":"exact"},{"name":"salicylic acid degradation","type":"exact"}],"termid":"GO:0046244"}


id: PBO:0039311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 5, RNA demethylase","termid":"PBO:0039311"}


id: MONDO:0016273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant germ cell tumor of corpus uteri","secondary_identifiers":["Orphanet:213751","GARD:20485","UMLS:C4750753","MEDGEN:1655229"],"synonyms":[{"name":"body of uterus malignant germ cell tumor","type":"exact"},{"name":"body of uterus malignant germ cell tumour","type":"exact"},{"name":"germ cell cancer of corpus uteri","type":"exact"},{"name":"germ cell cancer of the corpus uteri","type":"exact"},{"name":"malignant germ cell tumor of the corpus uteri","type":"related"},{"name":"malignant germ cell tumour of the corpus uteri","type":"related"}],"termid":"MONDO:0016273","xrefs":{"Monarch":{"xref_id":"0016273"}}}


id: PBO:0024834
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta Glucan Synthase","termid":"PBO:0024834"}


id: GO:0046937
data:
  {"annotated_genes":["SJAG_04516","SJAG_01351","SJAG_00988","SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96566,107587,96211,92507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[96212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090423"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"phytochelatin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin metabolic process","type":"related"},{"name":"cadystin metabolism","type":"related"},{"name":"phytochelatin metabolism","type":"exact"}],"termid":"GO:0046937","terms_by_termid":{"GO:0046938":null,"GO:0090423":null}}


id: GO:1902017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cilium assembly.","definition_xrefs":["GOC:TermGenie","PMID:17719545","GOC:cilia","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cilium assembly","synonyms":[{"name":"regulation of ciliogenesis","type":"exact"},{"name":"regulation of cilium biogenesis","type":"related"}],"termid":"GO:1902017"}


id: PBO:0042568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2A","termid":"PBO:0042568"}


id: GO:0005388
data:
  {"annotated_genes":["SJAG_01400","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100818,107824],"is_not":false,"summary":null,"term":"GO:0005388"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(in) = ADP + phosphate + Ca2+(out).","definition_xrefs":["RHEA:18105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transporter activity","termid":"GO:0015085"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01400":null,"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"P-type calcium transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9664214","Reactome:R-HSA-936883","MetaCyc:TRANS-RXN-194","Reactome:R-HSA-418309","Reactome:R-HSA-427910","Reactome:R-HSA-9662114","Reactome:R-HSA-418365","EC:7.2.2.10"],"synonyms":[{"name":"ATP-dependent calcium transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled calcium transmembrane transporter activity","type":"related"},{"name":"Ca(2+)-transporting ATPase activity","type":"related"},{"name":"Ca2+-transporting ATPase activity","type":"related"},{"name":"calcium efflux ATPase","type":"narrow"},{"name":"calcium pump","type":"broad"},{"name":"calcium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"calcium transporting ATPase activity","type":"exact"},{"name":"calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"calcium-transporting ATPase activity","type":"exact"},{"name":"sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"}],"termid":"GO:0005388","terms_by_termid":{"GO:0005388":null}}


id: PBO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQGAP","termid":"PBO:0001655"}


id: GO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to electroception in which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"part_of","term_name":"electroception","termid":"GO:0050956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in electroception","synonyms":[{"name":"detection of electrical stimulus during electroreception","type":"related"},{"name":"electroception, detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory transduction","type":"exact"},{"name":"electroception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during electroception","type":"related"},{"name":"sensory transduction of electrical stimulus during electroception","type":"related"}],"termid":"GO:0050964"}


id: RO:HOM0000023
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a lineage-specific duplication subsequent to a given speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_in-paralogy_relationship_with","synonyms":[{"name":"in-paralogous to","type":"exact"},{"name":"inparalogy","type":"exact"},{"name":"symparalogy","type":"exact"}],"termid":"RO:HOM0000023"}


id: PBO:0055754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA associated with ovarian cancer 1","termid":"PBO:0055754"}


id: FYPO:0000392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the metaphase/anaphase transition under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest at mitotic metaphase/anaphase transition (obsolete FYPO:0000392)","synonyms":[{"name":"abnormal cell cycle arrest at metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition with condensed chromosomes","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at metaphase/anaphase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase arrest","type":"exact"},{"name":"cell cycle passage through the metaphase-anaphase transition: arrested","type":"related"}],"termid":"FYPO:0000392"}


id: PBO:0057175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 326","termid":"PBO:0057175"}


id: PR:O59835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase delta subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14303:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.02c","secondary_identifiers":["UniProtKB:O59835"],"synonyms":[{"name":"SPBC12D12.02c","type":"related"},{"name":"Spom972h-POLD4","type":"exact"}],"termid":"PR:O59835"}


id: GO:0050189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoenolpyruvate = phosphate + pyruvate.","definition_xrefs":["EC:3.1.3.60","RHEA:19997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphoenolpyruvate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R00208","MetaCyc:PHOSPHOENOLPYRUVATE-PHOSPHATASE-RXN"],"synonyms":[{"name":"PEP phosphatase activity","type":"related"},{"name":"phosphoenolpyruvate phosphohydrolase activity","type":"related"}],"termid":"GO:0050189"}


id: PATO:0000647
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's undergoing unprogrammed cell death.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Necrotic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotic","termid":"PATO:0000647"}


id: MONDO:0026729
data:
  {"annotated_genes":["SJAG_03333"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85144],"is_not":false,"summary":null,"term":"MONDO:0026729"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type ICC","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111839","UMLS:C5231393","MEDGEN:1684742","OMIM:301031"],"synonyms":[{"name":"CDG1CC","type":"related"},{"name":"CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Icc","type":"related"},{"name":"congenital disorder of glycosylation, type Icc, X-linked recessive","type":"exact"}],"termid":"MONDO:0026729","terms_by_termid":{"MONDO:0026729":null},"xrefs":{"Monarch":{"xref_id":"0026729"}}}


id: GO:0061577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of a high voltage-gated calcium channel.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"calcium ion transmembrane transport via high voltage-gated calcium channel","synonyms":[{"name":"generation of L-type calcium current","type":"related"}],"termid":"GO:0061577"}


id: PBO:0029637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_cell_with_enlarged_nucleus","termid":"PBO:0029637"}


id: MONDO:0009562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beta-mannosidosis is a very rare lysosomal storage disease characterized by developmental delay of varying severity and hearing loss, but that can manifest a wide phenotypic heterogeneity.","definition_xrefs":["Orphanet:118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0037792","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"beta-mannosidosis","secondary_identifiers":["OMIM:248510","MESH:D044905","MEDGEN:888408","ICD9:271.8","DOID:3633","NANDO:1200129","UMLS:C4048196","GARD:869","NCIT:C84596","SCTID:238047006","icd11.foundation:1578707401","NANDO:2201190"],"synonyms":[{"name":"Beta-D-mannosidosis","type":"exact"},{"name":"Beta-mannosidase deficiency","type":"exact"},{"name":"MANSB","type":"related"},{"name":"beta-mannosidase deficiency","type":"exact"},{"name":"beta-mannosidosis","type":"exact"},{"name":"lysosomal Beta-mannosidase deficiency","type":"related"},{"name":"lysosomal beta-mannosidase deficiency","type":"exact"},{"name":"mannosidosis, BETA A, lysosomal","type":"related"},{"name":"mannosidosis, beta","type":"exact"}],"termid":"MONDO:0009562","xrefs":{"Monarch":{"xref_id":"0009562"}}}


id: PBO:0003134
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginosuccinicaciduria","termid":"PBO:0003134"}


id: PBO:0083869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein containing five copies of the WD40 motif; controls cell cycle function, sulfur metabolism, and methionine biosynthesis as part of the ubiquitin ligase complex; interacts with and regulates Met4p, localizes within the nucleus; dissociation of Met30p from SCF complex in response to cadmium stress is regulated by Cdc48p","termid":"PBO:0083869"}


id: PBO:0052407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 1","termid":"PBO:0052407"}


id: PBO:0081869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 808","termid":"PBO:0081869"}


id: SO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine rich domain whereby strands associate both inter- and intramolecularly at moderately acidic pH.","definition_xrefs":["PMID:9753739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_sequence_secondary_structure","termid":"SO:0000142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"i_motif","synonyms":[{"name":"i motif","type":"exact"},{"name":"short intercalated motif","type":"exact"}],"termid":"SO:0001010"}


id: PBO:0038809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 15","termid":"PBO:0038809"}


id: GO:0048526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of expanding or inflating the folded imaginal disc-derived pupal wing, and the adhering of the dorsal and ventral surfaces, to form the mature adult wing.","definition_xrefs":["GOC:rc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing expansion","synonyms":[{"name":"wing expansion","type":"exact"},{"name":"wing inflation","type":"exact"}],"termid":"GO:0048526"}


id: PBO:0059442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A13","termid":"PBO:0059442"}


id: GO:0000307
data:
  {"annotated_genes":["SJAG_03421","SJAG_00973","SJAG_01401","SJAG_03048","SJAG_01716","SJAG_01000","SJAG_03525","SJAG_00100","SJAG_04140","SJAG_05978","SJAG_03967","SJAG_02057","SJAG_01213","SJAG_03699","SJAG_01149","SJAG_00439","SJAG_03061","SJAG_03591","SJAG_02404"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87425,90937,91332,100800,101527,103499,104171,104850,105126,105417,105512,107503,108020,108180,110327,116198],"is_not":false,"summary":null,"term":"GO:0000307"},{"annotations":[94997,110052,116122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[110055,94998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019908"},{"annotations":[108182,108023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"Cyclin-dependent protein kinases (CDKs) are enzyme complexes that contain a kinase catalytic subunit associated with a regulatory cyclin partner.","definition_xrefs":["GOC:krc","PMID:11602261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00439":null,"SJAG_00973":null,"SJAG_01000":null,"SJAG_01149":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01716":null,"SJAG_02057":null,"SJAG_02404":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03699":null,"SJAG_03967":null,"SJAG_04140":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin-dependent protein kinase holoenzyme complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CDK holoenzyme","type":"exact"}],"termid":"GO:0000307","terms_by_termid":{"GO:0000307":null,"GO:0019908":null,"GO:0070691":null,"GO:0070692":null}}


id: GO:0140259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PRC1 complex.","definition_xrefs":["PMID:15280237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"PRC1 complex binding","termid":"GO:0140259"}


id: PBO:0047734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 4","termid":"PBO:0047734"}


id: FYPO:0004915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the sequence of the telomeric repeating unit is normal (i.e. identical to that found in wild type).","definition_xrefs":["PomBase:mah","PMID:18157152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal telomeric repeat sequence","termid":"FYPO:0004915"}


id: PBO:0070905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 13","termid":"PBO:0070905"}


id: GO:0019476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine catabolic process","termid":"GO:0006554"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-lysine metabolic process","termid":"GO:0046441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"D-lysine catabolic process","synonyms":[{"name":"D-lysine breakdown","type":"exact"},{"name":"D-lysine catabolism","type":"exact"},{"name":"D-lysine degradation","type":"exact"}],"termid":"GO:0019476"}


id: FYPO:0003879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which changes in vacuolar morphology or function associated with cell aging begin later than normal. As cells age, vacuoles become fragmented and vacuolar acidity decreases. In a mutant, these changes may occur to a lesser extent as well as later than in wild type.","definition_xrefs":["PMID:23521895","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of age-related vacuolar changes","synonyms":[{"name":"delayed age-related vacuolar changes","type":"exact"},{"name":"delayed onset of age-related vacuole changes","type":"exact"},{"name":"delayed onset of vacuolar changes during cell aging","type":"exact"},{"name":"increased vacuolar maintenance in aged cells","type":"related"}],"termid":"FYPO:0003879"}


id: PBO:0079945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USO1 vesicle transport factor","termid":"PBO:0079945"}


id: GO:0050709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a protein from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of protein secretion","synonyms":[{"name":"down regulation of protein secretion","type":"exact"},{"name":"down-regulation of protein secretion","type":"exact"},{"name":"downregulation of protein secretion","type":"exact"},{"name":"inhibition of protein secretion","type":"narrow"}],"termid":"GO:0050709"}


id: PBO:0049690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAND2 antisense RNA 1","termid":"PBO:0049690"}


id: PBO:0070210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 138 pseudogene","termid":"PBO:0070210"}


id: RO:HOM0000049
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves genes from the same species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_within-species_paralogy_relationship_with","synonyms":[{"name":"within-species paralogous to","type":"exact"}],"termid":"RO:HOM0000049"}


id: PBO:0012234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chalcone related protein family","termid":"PBO:0012234"}


id: GO:0039541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of RIG-I (also known as DDX58) by binding to RIG-I itself.","definition_xrefs":["VZ:856","PMID:19193793","PMID:20007272"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I via RIG-I binding (obsolete GO:0039541)","synonyms":[{"name":"inhibition by virus of host DDX58:MAVS binding","type":"exact"}],"termid":"GO:0039541"}


id: GO:0019440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including indole-3-acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"tryptophan catabolic process to indole-3-acetate","secondary_identifiers":["MetaCyc:TRPIAACAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to indole-3-acetate","type":"exact"},{"name":"tryptophan catabolic process to IAA","type":"exact"},{"name":"tryptophan catabolic process to indoleacetic acid","type":"exact"},{"name":"tryptophan catabolism to indoleacetic acid","type":"exact"},{"name":"tryptophan degradation to indole-3-acetate","type":"exact"}],"termid":"GO:0019440"}


id: PBO:0084026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase; highly conserved enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'-phosphate (IMP); transcription is not subject to regulation by guanine but is negatively regulated by nutrient starvation; reduction-of-function mutation gua1-G388D causes changes in cellular guanine nucleotide pools, defects in general protein synthesis, and impaired translation of GCN4 mRNA","termid":"PBO:0084026"}


id: MONDO:0008806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aphalangy-hemivertebrae-urogenital-intestinal dysgenesis is an extremely rare congenital limb malformation syndrome, described in only 3 patients to date, and characterized by the association of hypoplasia or aplasia of the hand and foot phalanges, hemivertebrae and various urogenital and/or intestinal abnormalities (i.e. dysgenesis of the urogenital tract and rectum). There have been no further descriptions in the literature since 1991.","definition_xrefs":["Orphanet:1112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Aphalangy-hemivertebrae-urogenital-intestinal dysgenesis syndrome","secondary_identifiers":["OMIM:207620","SCTID:733118006","UMLS:C1859754","MEDGEN:347225","GARD:3051","MESH:C535881"],"synonyms":[{"name":"APHALANGY with hemivertebrae","type":"related"},{"name":"Aphalangy of the hands and feet, hemivertebrae, and visceral malformations","type":"related"},{"name":"Johnson Munson syndrome","type":"related"},{"name":"Johnson-Munson syndrome","type":"exact"}],"termid":"MONDO:0008806","xrefs":{"Monarch":{"xref_id":"0008806"}}}


id: GO:0150110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cholesterol esterification.","definition_xrefs":["GOC:bc","PMID:24201375","PMID:21810484","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cholesterol esterification (obsolete GO:0150110)","termid":"GO:0150110"}


id: PBO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family protein","termid":"PBO:0000155"}


id: MONDO:0005867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Interstitial pneumonia caused by extensive infection of the lungs (lung) and bronchi, particularly the lower lobes of the lungs, by mycoplasma pneumoniae in humans. In sheep, it is caused by mycoplasma ovipneumoniae. In cattle, it may be caused by mycoplasma dispar.","definition_xrefs":["MESH:D011019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"Mycoplasmoides infection","termid":"MONDO:1030003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycoplasma pneumoniae pneumonia","secondary_identifiers":["NCIT:C122526","UMLS:C0032302","DOID:13276","EFO:0007387","MEDGEN:19363","ICD9:483.0","SCTID:46970008"],"synonyms":[{"name":"Mycoplasma pneumonia","type":"exact"},{"name":"Mycoplasmal pneumonia","type":"exact"},{"name":"cold agglutinin positive pneumonia","type":"exact"},{"name":"pneumonia due to Eaton's agent","type":"exact"},{"name":"pneumonia due to Mycoplasma pneumoniae","type":"exact"},{"name":"pneumonia due to Mycoplasma pneumoniae (disorder)","type":"exact"}],"termid":"MONDO:0005867","xrefs":{"Monarch":{"xref_id":"0005867"}}}


id: PBO:0033807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telomeric_regions_absent_from_linear_chromosomes","termid":"PBO:0033807"}


id: PR:O59838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pss1 gene.","definition_xrefs":["UniProtKB:O59838","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein homolog pss1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC110.04c","synonyms":[{"name":"Spom972h-pss1","type":"exact"}],"termid":"PR:O59838"}


id: PBO:0067950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 252","termid":"PBO:0067950"}


id: MONDO:0004754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protrusion of the rectum through the anus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal disorder","termid":"MONDO:0001593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal prolapse","secondary_identifiers":["DOID:9307","icd11.foundation:231914102","UMLS:C0034888","MESH:D012005","MEDGEN:11151","NCIT:C34973","HP:0002035","ICD10CM:K62.3","ICD9:569.1"],"synonyms":[{"name":"procidentia, rectum","type":"exact"},{"name":"rectal prolapse","type":"exact"},{"name":"rectal prolapse (disease)","type":"exact"}],"termid":"MONDO:0004754","xrefs":{"Monarch":{"xref_id":"0004754"}}}


id: PBO:0046992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member C","termid":"PBO:0046992"}


id: PBO:0046563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 5","termid":"PBO:0046563"}


id: GO:0021728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:curators","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior reticular formation development","termid":"GO:0021728"}


id: FYPO:0003717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton during vegetative growth","termid":"FYPO:0004739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal actin cytoskeleton morphology during vegetative growth","synonyms":[{"name":"normal actin cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003717"}


id: GO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitters into neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transport","termid":"GO:0006836"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter uptake","synonyms":[{"name":"neurotransmitter import","type":"exact"},{"name":"neurotransmitter import into glial cell","type":"narrow"},{"name":"neurotransmitter import into neuron","type":"narrow"},{"name":"neurotransmitter recycling","type":"broad"}],"termid":"GO:0001504"}


id: PBO:0040590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACH1 antisense RNA 1","termid":"PBO:0040590"}


id: PBO:0040974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BNIP3 pseudogene 45","termid":"PBO:0040974"}


id: MONDO:0016046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial clubfoot with or without associated lower limb anomalies is a rare congenital limb malformation syndrome characterized by malalignment of the bones and joints of the foot and ankle, with presence of forefoot and midfoot adductus, hindfoot varus, and ankle equinus, presenting as rigid inward turning of the foot towards the midline, in various members of a single family. Hypoplasia of lower leg muscles is a frequently associated finding. Patients may present with other low-limb malformations, such as patellar hypoplasia, oblique talus, tibial hemimelia, and polydactyly.","definition_xrefs":["Orphanet:199315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial clubfoot with or without associated lower limb anomalies","secondary_identifiers":["GARD:17093","MEDGEN:1843133","UMLS:C5680522"],"termid":"MONDO:0016046","xrefs":{"Monarch":{"xref_id":"0016046"}}}


id: PBO:0065043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 2","termid":"PBO:0065043"}


id: PBO:0039786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 12B","termid":"PBO:0039786"}


id: MONDO:0016781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies due to 14q32.2 maternally expressed gene defect","termid":"MONDO:0016779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal 14q32.2 microdeletion syndrome","secondary_identifiers":["GARD:17221","UMLS:C5679640","MEDGEN:1842712","Orphanet:254528"],"synonyms":[{"name":"maternal del(14)(q32.2)","type":"exact"},{"name":"maternal monosomy 14q32.2","type":"exact"}],"termid":"MONDO:0016781","xrefs":{"Monarch":{"xref_id":"0016781"}}}


id: FYPO:0001483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity increases normally (i.e. as in wild type) as a result of oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"},{"relation_name":"is_a","term_name":"normal cellular response to oxidative stress","termid":"FYPO:0001485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000298","FYPO:0001320","FYPO:0000654","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity increase during cellular response to oxidative stress","synonyms":[{"name":"normal alpha,alpha-trehalase activity increase during oxidative stress response","type":"exact"},{"name":"normal increase in trehalase activity in response to oxidative stress","type":"exact"},{"name":"normal neutral trehalase activity increase during cellular response to oxidative stress","type":"exact"},{"name":"normal trehalase activity increase during cellular response to oxidative stress","type":"broad"}],"termid":"FYPO:0001483"}


id: PBO:0064897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'gamma","termid":"PBO:0064897"}


id: MONDO:0100336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that result from the presence and activity of a microbial, viral, fungal or parasitic agent, or a disorder that follows infection with an infectious agent but is distinct from the usual manifestations of the infection itself.","gene_count":0,"genotype_count":0,"name":"obsolete infectious disease or post-infectious disorder (obsolete MONDO:0100336)","synonyms":[{"name":"infectious disease or sequela","type":"exact"}],"termid":"MONDO:0100336","xrefs":{"Monarch":{"xref_id":"0100336"}}}


id: GO:0002726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"is_a","term_name":"regulation of T cell cytokine production","termid":"GO:0002724"},{"relation_name":"positively_regulates","term_name":"T cell cytokine production","termid":"GO:0002369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of T cell cytokine production","synonyms":[{"name":"activation of T cell cytokine production","type":"narrow"},{"name":"positive regulation of T lymphocyte cytokine production","type":"exact"},{"name":"positive regulation of T-cell cytokine production","type":"exact"},{"name":"positive regulation of T-lymphocyte cytokine production","type":"exact"},{"name":"stimulation of T cell cytokine production","type":"narrow"},{"name":"up regulation of T cell cytokine production","type":"exact"},{"name":"up-regulation of T cell cytokine production","type":"exact"},{"name":"upregulation of T cell cytokine production","type":"exact"}],"termid":"GO:0002726"}


id: PBO:0036368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT complex RNA-binding protein subunit Rcd1","termid":"PBO:0036368"}


id: PBO:0029086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029086"}


id: GO:1990004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: XDP + H2O = XMP + phosphate.","definition_xrefs":["PMID:20385596"],"gene_count":0,"genotype_count":0,"name":"obsolete XDP phosphatase activity (obsolete GO:1990004)","termid":"GO:1990004"}


id: PBO:0064536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase mitochondrial pseudogene 1","termid":"PBO:0064536"}


id: PBO:0057939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3664","termid":"PBO:0057939"}


id: GO:1904329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myofibroblast contraction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19239477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of myofibroblast contraction","termid":"GO:1904328"},{"relation_name":"negatively_regulates","term_name":"myofibroblast contraction","termid":"GO:1990764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myofibroblast contraction","synonyms":[{"name":"down regulation of MF contraction","type":"exact"},{"name":"down regulation of MFB contraction","type":"exact"},{"name":"down regulation of myofibroblast contraction","type":"exact"},{"name":"down-regulation of MF contraction","type":"exact"},{"name":"down-regulation of MFB contraction","type":"exact"},{"name":"down-regulation of myofibroblast contraction","type":"exact"},{"name":"downregulation of MF contraction","type":"exact"},{"name":"downregulation of MFB contraction","type":"exact"},{"name":"downregulation of myofibroblast contraction","type":"exact"},{"name":"inhibition of MF contraction","type":"narrow"},{"name":"inhibition of MFB contraction","type":"narrow"},{"name":"inhibition of myofibroblast contraction","type":"narrow"},{"name":"negative regulation of MF contraction","type":"exact"},{"name":"negative regulation of MFB contraction","type":"exact"}],"termid":"GO:1904329"}


id: MONDO:0003655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin or Hodgkin lymphoma that arises in the cerebral hemispheres as a primary lesion.","definition_xrefs":["NCIT:C7611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary central nervous system lymphoma","termid":"MONDO:0002571"},{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"cerebral lymphoma","secondary_identifiers":["SCTID:276836002","MEDGEN:116109","UMLS:C0240803","DOID:5815"],"synonyms":[{"name":"brain primary lymphoma","type":"exact"},{"name":"cerebral lymphoma","type":"exact"},{"name":"primary cerebral lymphoma","type":"exact"},{"name":"primary lymphoma of cerebrum","type":"exact"},{"name":"primary lymphoma of the cerebrum","type":"exact"},{"name":"primary lymphoma, brain","type":"exact"}],"termid":"MONDO:0003655","xrefs":{"Monarch":{"xref_id":"0003655"}}}


id: MONDO:0035410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital hypoglossia/aglossia","termid":"MONDO:0013003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"isolated congenital aglossia","secondary_identifiers":["ICD10CM:Q38.3","Orphanet:563951","GARD:22263"],"termid":"MONDO:0035410","xrefs":{"Monarch":{"xref_id":"0035410"}}}


id: MONDO:0005095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of inflammatory rheumatic diseases associated with arthritis and enthesitis, and often involving the axial skeleton. The most common form of spondyloarthritis is ankylosing spondylitis. Other forms include axial spondyloarthritis, peripheral spondyloarthritis, reactive arthritis, psoriatic arthritis/spondylitis and enteropathic arthritis/spondylitis.","definition_xrefs":["NCIT:C116778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"spondyloarthropathy","secondary_identifiers":["MEDGEN:181888","UMLS:C0949691","SCTID:372109003","EFO:0000706","DOID:1123","SCTID:8847002","MESH:D055009"],"synonyms":[{"name":"seronegative spondyloarthropathy","type":"exact"},{"name":"spondarthropathy","type":"exact"},{"name":"spondylarthropathy","type":"related"},{"name":"spondylarthrosis","type":"exact"},{"name":"spondyloarthritis","type":"exact"}],"termid":"MONDO:0005095","xrefs":{"Monarch":{"xref_id":"0005095"}}}


id: PATO:0001706
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's disposition to lack activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioural activity","termid":"PATO:0002265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioural inactive","termid":"PATO:0001706"}


id: PBO:0027985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_normal_septum_morphology","termid":"PBO:0027985"}


id: PBO:0056039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 4","termid":"PBO:0056039"}


id: PBO:0109467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ribosyldihydronicotinamide:quinone dehydrogenase 2","termid":"PBO:0109467"}


id: PBO:0046258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal sperm binding protein 1","termid":"PBO:0046258"}


id: PBO:0078079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated protein 1","termid":"PBO:0078079"}


id: PBO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of leptomycin B","termid":"PBO:0001741"}


id: PR:O13931
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp18 gene.","definition_xrefs":["UniProtKB:O13931","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit J, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.11","synonyms":[{"name":"Spom972h-atp18","type":"exact"}],"termid":"PR:O13931"}


id: GO:0090069
data:
  {"annotated_genes":["SJAG_03241","SJAG_02671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92691,88672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090070"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02671":null,"SJAG_03241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"regulation of ribosome biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090069","terms_by_termid":{"GO:0090070":null}}


id: PBO:0049667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan binding protein 2","termid":"PBO:0049667"}


id: MONDO:0100427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of a diseae in which it does not result from diagnostic and therapeutic procedures undertaken on a patient.","definition_xrefs":["PMID:27407693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic or non-iatrogenic","termid":"MONDO:0100369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-iatrogenic","termid":"MONDO:0100427","xrefs":{"Monarch":{"xref_id":"0100427"}}}


id: GO:0016855
data:
  {"annotated_genes":["SJAG_04298","SJAG_00036"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91665,116493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036361"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00036":null,"SJAG_04298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"racemase and epimerase activity, acting on amino acids and derivatives","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.1.1.-"],"termid":"GO:0016855","terms_by_termid":{"GO:0036361":null}}


id: PBO:0086614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086614"}


id: PBO:0113469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1-stimulating GTPase and EGO/GSE complex; subunit of Gtr1-Gtr2 GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE vacuolar membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p; involved in phosphate transport, telomeric chromatin silencing and oxidative stress response; activated by Iml1p (GAP) subunit of SEACIT complex; targeted to vacuole via AP-3 pathway; similar to human RagA and RagB","termid":"PBO:0113469"}


id: MONDO:0020850
data:
  {"annotated_genes":["SJAG_03635","SJAG_03286","SJAG_01465"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85566,85567,85568],"is_not":false,"summary":null,"term":"MONDO:0020850"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 65","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081226","GARD:22578","OMIM:618109","UMLS:C4748219","MEDGEN:1648401"],"synonyms":[{"name":"MRT65","type":"exact"},{"name":"intellectual disability, autosomal recessive 65","type":"exact"},{"name":"mental retardation, autosomal recessive 65","type":"exact"}],"termid":"MONDO:0020850","terms_by_termid":{"MONDO:0020850":null},"xrefs":{"Monarch":{"xref_id":"0020850"}}}


id: MONDO:0005250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammatory process that involves the chorionic villi (villitis) of the placenta.","definition_xrefs":["EFO:0003110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"disorder of extraembryonic membrane","termid":"MONDO:0045013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placental villitis","secondary_identifiers":["MEDGEN:693918","UMLS:C1270169","SCTID:388604008"],"termid":"MONDO:0005250","xrefs":{"Monarch":{"xref_id":"0005250"}}}


id: GO:0071341
data:
  {"annotated_genes":["SJAG_00279","SJAG_04280","SJAG_04498","SJAG_00228","SJAG_04486","SJAG_05290","SJAG_03703","SJAG_01889","SJAG_02368","SJAG_03602","SJAG_00773","SJAG_00807","SJAG_01665","SJAG_03564","SJAG_02169","SJAG_03596","SJAG_01143","SJAG_01456"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87482,88162,89926,91523,91781,93054,95512,97219,97624,98193,99881,100445,104337,105361,115135,116160,116998],"is_not":false,"summary":null,"term":"GO:0071341"},{"annotations":[97622,98190,102661,115134],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"}]},"cv_name":"cellular_component","definition":"A component of the cell division site that contains the mid1, cdr2, wee1, klp8, and blt1 proteins, and is involved in contractile ring localization. Medial cortical node complexes appear as cortical dots in the middle of the cell during interphase, and function to recruit other ring components in early mitosis.","definition_xrefs":["PMID:19474789","GOC:vw","PMID:19959363","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"medial cortex","termid":"GO:0031097"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00279":null,"SJAG_00773":null,"SJAG_00807":null,"SJAG_01143":null,"SJAG_01456":null,"SJAG_01665":null,"SJAG_01889":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_03564":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03703":null,"SJAG_04280":null,"SJAG_04486":null,"SJAG_04498":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mid1p medial cortical dot","type":"exact"},{"name":"midsome","type":"exact"}],"termid":"GO:0071341","terms_by_termid":{"GO:0071341":null,"GO:0110115":null}}


id: GO:0035067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone acetylation (obsolete GO:0035067)","synonyms":[{"name":"down regulation of histone acetylation","type":"exact"},{"name":"down-regulation of histone acetylation","type":"exact"},{"name":"downregulation of histone acetylation","type":"exact"},{"name":"inhibition of histone acetylation","type":"narrow"}],"termid":"GO:0035067"}


id: MONDO:0015943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic granulomatosis with polyangiitis (EGPA), previously known as Churg-Strauss syndrome, is a systemic vasculitis of small-to medium vessels, characterized by asthma, transient pulmonary infiltrates, and hypereosinophilia.","definition_xrefs":["Orphanet:183"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic inflammatory disease associated with an acquired peripheral neuropathy (obsolete MONDO:0016177)","termid":"MONDO:0016177"},{"relation_name":"excluded_subClassOf","term_name":"obsolete non-familial rare disease with dilated cardiomyopathy (obsolete MONDO:0017952)","termid":"MONDO:0017952"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"granulomatosis with polyangiitis","termid":"MONDO:0012105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005240"],"is_obsolete":false,"name":"eosinophilic granulomatosis with polyangiitis","secondary_identifiers":["NANDO:1200264","DOID:3049","EFO:0007208","NCIT:C34481","SCTID:82275008","UMLS:C0008728","MESH:D015267","NANDO:2200427","MedDRA:10048594","NORD:973","GARD:6111","icd11.foundation:835880885","MEDGEN:3088"],"synonyms":[{"name":"CSS","type":"exact"},{"name":"Churg Strauss Syndrome","type":"exact"},{"name":"Churg Strauss syndrome","type":"exact"},{"name":"Churg-Strauss syndrome","type":"exact"},{"name":"Churg-Strauss vasculitis","type":"exact"},{"name":"EGPA","type":"exact"},{"name":"allergic angiitides","type":"exact"},{"name":"allergic angiitides, granulomatous","type":"exact"},{"name":"allergic angiitis","type":"exact"},{"name":"allergic angiitis and granulomatosis","type":"exact"},{"name":"allergic angiitis, granulomatous","type":"exact"},{"name":"allergic granulomatoses","type":"exact"},{"name":"allergic granulomatosis","type":"exact"},{"name":"allergic granulomatosis angiitis","type":"exact"},{"name":"allergic granulomatous Angiitides","type":"exact"},{"name":"allergic granulomatous and angiitis","type":"exact"},{"name":"allergic granulomatous angiitis","type":"exact"},{"name":"angiitides, allergic","type":"exact"},{"name":"angiitides, allergic granulomatous","type":"exact"},{"name":"angiitides, granulomatous allergic","type":"exact"},{"name":"angiitis, allergic","type":"exact"},{"name":"angiitis, allergic granulomatous","type":"exact"},{"name":"angiitis, granulomatous allergic","type":"exact"},{"name":"eosinophilic granulomatous Vasculitides","type":"exact"},{"name":"eosinophilic granulomatous vasculitis","type":"exact"},{"name":"granulomatoses, allergic","type":"exact"},{"name":"granulomatosis, allergic","type":"exact"},{"name":"granulomatous allergic Angiitides","type":"exact"},{"name":"granulomatous allergic angiitis","type":"exact"},{"name":"granulomatous angiitides, allergic","type":"exact"},{"name":"granulomatous angiitis, allergic","type":"exact"},{"name":"granulomatous vasculitides, eosinophilic","type":"exact"},{"name":"granulomatous vasculitis, eosinophilic","type":"exact"},{"name":"syndrome, Churg-Strauss","type":"exact"},{"name":"vasculitides, eosinophilic granulomatous","type":"exact"},{"name":"vasculitis, Churg Strauss","type":"exact"},{"name":"vasculitis, Churg-Strauss","type":"exact"},{"name":"vasculitis, eosinophilic granulomatous","type":"exact"}],"termid":"MONDO:0015943","xrefs":{"Monarch":{"xref_id":"0015943"}}}


id: GO:1903508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of nucleic acid-templated transcription.","definition_xrefs":["GOC:pr","GOC:txnOH","GOC:TermGenie","GOC:vw","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nucleic acid-templated transcription (obsolete GO:1903508)","synonyms":[{"name":"activation of nucleic acid-templated transcription","type":"narrow"},{"name":"up regulation of nucleic acid-templated transcription","type":"exact"},{"name":"up-regulation of nucleic acid-templated transcription","type":"exact"},{"name":"upregulation of nucleic acid-templated transcription","type":"exact"}],"termid":"GO:1903508"}


id: PBO:0049750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit zeta pseudogene 1","termid":"PBO:0049750"}


id: PBO:0060213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate diphosphate decarboxylase","termid":"PBO:0060213"}


id: PBO:0041550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 63","termid":"PBO:0041550"}


id: MONDO:0005617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant epithelial neoplasm composed of atypical cells which do not display evidence of glandular, squamous, or transitional cell differentiation.","definition_xrefs":["NCIT:C3692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated carcinoma","secondary_identifiers":["EFO:0006772","MEDGEN:60010","UMLS:C0205698","ICDO:8020/3","ICDO:8021/3"],"synonyms":[{"name":"anaplastic carcinoma","type":"exact"},{"name":"carcinoma, undifferentiated","type":"exact"},{"name":"carcinoma, undifferentiated, malignant","type":"exact"},{"name":"undifferentiated carcinoma","type":"exact"}],"termid":"MONDO:0005617","xrefs":{"Monarch":{"xref_id":"0005617"}}}


id: MOD:00600
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamate 5-ethyl ester.","definition_xrefs":["DeltaMass:0","PubMed:9629898","Unimod:280#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"ethylated residue","termid":"MOD:01339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid 5-ethyl ester","synonyms":[{"name":"Ethyl","type":"exact"},{"name":"Ethylation","type":"related"}],"termid":"MOD:00600"}


id: PBO:0076379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1/MAP3K7 binding protein 3 pseudogene 1","termid":"PBO:0076379"}


id: MOD:00389
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N-formyl-L-proline.","definition_xrefs":["PubMed:12051774","PubMed:5464655","RESID:AA0384","Unimod:122#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyl-L-proline","synonyms":[{"name":"(2S)-1-formylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"1-formyl-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"1-formylproline","type":"exact"},{"name":"N-formyl-L-proline","type":"exact"},{"name":"N-formylated L-proline","type":"exact"},{"name":"NFoPro","type":"exact"}],"termid":"MOD:00389"}


id: GO:0051512
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93776,95044,89070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"positively_regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of unidimensional cell growth","type":"narrow"},{"name":"positive regulation of cell elongation","type":"narrow"},{"name":"stimulation of unidimensional cell growth","type":"narrow"},{"name":"up regulation of unidimensional cell growth","type":"exact"},{"name":"up-regulation of unidimensional cell growth","type":"exact"},{"name":"upregulation of unidimensional cell growth","type":"exact"}],"termid":"GO:0051512","terms_by_termid":{"GO:0051519":null}}


id: PBO:0088708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA N6-threonyl-carbamoyl-adenosine (t6A) Pgp1","termid":"PBO:0088708"}


id: PBO:0057391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548d-2","termid":"PBO:0057391"}


id: PBO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Slt1 (predicted)","termid":"PBO:0002133"}


id: PBO:0073870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B2","termid":"PBO:0073870"}


id: MONDO:0008934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cereballar ataxia - ectodermal dysplasia is a very rare disease, characterized by hypodontia and sparse hair in combination with cerebellar ataxia and normal intelligence. Imaging demonstrates a cerebellar atrophy.","definition_xrefs":["Orphanet:1174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cerebellar ataxia-ectodermal dysplasia syndrome","secondary_identifiers":["GARD:1189","MEDGEN:347850","SCTID:715371006","OMIM:212835","MESH:C535350","UMLS:C1859306"],"synonyms":[{"name":"cerebellar ataxia - ectodermal dysplasia","type":"related"},{"name":"cerebellar ataxia and ectodermal dysplasia","type":"related"},{"name":"cerebellar ataxia ectodermal dysplasia","type":"related"},{"name":"ectodermal dysplasia and cerebellar ataxia","type":"related"}],"termid":"MONDO:0008934","xrefs":{"Monarch":{"xref_id":"0008934"}}}


id: PBO:0002696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap145 (predicted)","termid":"PBO:0002696"}


id: MONDO:1010280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Priapism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priapism, non-human animal","secondary_identifiers":["OMIA:001166"],"termid":"MONDO:1010280","xrefs":{"Monarch":{"xref_id":"1010280"}}}


id: PBO:0072475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 4","termid":"PBO:0072475"}


id: GO:1902905
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of supramolecular fiber organization.","definition_xrefs":["GOC:PARL","GOC:rl","GOC:TermGenie","PMID:23921388","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"positively_regulates","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of supramolecular fiber organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of fibril organisation","type":"narrow"},{"name":"activation of fibril organization","type":"narrow"},{"name":"positive regulation of fibril organisation","type":"related"},{"name":"up regulation of fibril organisation","type":"related"},{"name":"up regulation of fibril organization","type":"related"},{"name":"up-regulation of fibril organisation","type":"related"},{"name":"up-regulation of fibril organization","type":"related"},{"name":"upregulation of fibril organisation","type":"related"},{"name":"upregulation of fibril organization","type":"related"}],"termid":"GO:1902905","terms_by_termid":{"GO:0031117":null}}


id: PBO:0087645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GPI:protein transamidase complex; removes the GPI-anchoring signal and attaches GPI (glycosylphosphatidylinositol) to proteins in the ER; human homolog GPAA1 can complement growth defects of yeast thermosensitive mutant at restrictive temperature","termid":"PBO:0087645"}


id: PBO:0026929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_anaphase-promoting_complex","termid":"PBO:0026929"}


id: FYPO:0001513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid segregation is the entire process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic sister chromatid segregation","synonyms":[{"name":"normal mitotic chromosome segregation","type":"exact"},{"name":"normal mitotic sister chromatid disjunction","type":"exact"},{"name":"normal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"normal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001513"}


id: GO:0017153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sodium:dicarboxylate symporter activity","synonyms":[{"name":"sodium:dicarboxylate cotransporter activity","type":"broad"}],"termid":"GO:0017153"}


id: GO:0032963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%).","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collagen metabolic process","synonyms":[{"name":"collagen metabolism","type":"exact"}],"termid":"GO:0032963"}


id: GO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host-derived membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host peribacteroid membrane","termid":"GO:0043664"}


id: MONDO:0700204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trichostrongyloidiasis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis, animal","termid":"MONDO:0025082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostrongyloidiasis, non-human animal","termid":"MONDO:0700204","xrefs":{"Monarch":{"xref_id":"0700204"}}}


id: PBO:0046854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 2B, pseudogene","termid":"PBO:0046854"}


id: SO:1000154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome duplication involving the insertion of a duplicated region (as opposed to a free duplication).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_duplication","termid":"SO:1000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertional_duplication","synonyms":[{"name":"(Drosophila)Dpp","type":"related"},{"name":"insertional duplication","type":"exact"}],"termid":"SO:1000154"}


id: FYPO:0005111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin-specific protease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ubiquitinyl hydrolase activity","termid":"FYPO:0003111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal ubiquitin-specific protease activity","termid":"FYPO:0005111"}


id: PBO:0066834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 133","termid":"PBO:0066834"}


id: PBO:0051873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isthmin 1","termid":"PBO:0051873"}


id: PBO:0049606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 9","termid":"PBO:0049606"}


id: GO:1990757
data:
  {"annotated_genes":["SJAG_00071","SJAG_04853","SJAG_00666","SJAG_03809","SJAG_03858"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87898,88157,99327,101476,114079],"is_not":false,"summary":null,"term":"GO:1990757"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a ubiquitin ligase.","definition_xrefs":["GOC:dph","PMID:25619242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase activator activity","termid":"GO:0097027"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"ubiquitin ligase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061636"],"synonyms":[{"name":"mitotic anaphase-promoting complex activator activity","type":"narrow"}],"termid":"GO:1990757","terms_by_termid":{"GO:1990757":null}}


id: PBO:0072446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 10","termid":"PBO:0072446"}


id: MOD:01142
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound 15,16-dihydrobiliverdin.","definition_xrefs":["PubMed:1559975","PubMed:15504407","RESID:AA0428","PubMed:10430868","PubMed:3208761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-15,16-dihydrobiliverdin-L-cysteine","synonyms":[{"name":"(16R)-18-ethenyl-8,12-bis(2-carboxyethyl)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,7,13,17-tetramethyl-15,16-dihydrobilin-1,19(21H,24H)-dione","type":"exact"},{"name":"15,16-Dhbv","type":"exact"},{"name":"15,16-dihydrobiliverdin IXalpha","type":"exact"},{"name":"15,16-dihydrobiliverdin cysteine adduct","type":"exact"},{"name":"18-ethenyl-8,12-bis(2-carboxyethyl)-3-(2-(cysteinyl-S)-ethyl)-2,7,13,17-tetramethylbiladiene-ab-1,19(16H,21H)-dione","type":"exact"},{"name":"3'-cysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"3alpha-cysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"BINDING 15,16-dihydrobiliverdin (covalent; via 1 link)","type":"exact"},{"name":"DBV","type":"exact"},{"name":"S-15,16-dihydrobiliverdin-L-cysteine","type":"exact"}],"termid":"MOD:01142"}


id: MOD:00937
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["Unimod:505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Levuglandinyl - arginine lactam adduct","synonyms":[{"name":"LG-lactam-R","type":"related"},{"name":"Levuglandinyl - arginine lactam adduct","type":"related"}],"termid":"MOD:00937"}


id: PATO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Positional quality in which an entity is located outside of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external to","termid":"PATO:0002483"}


id: GO:0070609
data:
  {"annotated_genes":["SJAG_02278","SJAG_00424","SJAG_00610","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91628,88647,102028,94134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070607"},{"relation_name":"regulates","term_name":"fungal-type cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070599"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of fungal-type cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ascospore wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"regulation of ascospore wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"regulation of ascospore wall alpha-1,3 glucan metabolism","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan metabolic process","type":"exact"}],"termid":"GO:0070609","terms_by_termid":{"GO:0070610":null}}


id: MONDO:0018194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sex cord-stromal tumor of testis (obsolete MONDO:0018194)","termid":"MONDO:0018194","xrefs":{"Monarch":{"xref_id":"0018194"}}}


id: PBO:0000479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase complex subunit Mms1 (predicted)","termid":"PBO:0000479"}


id: MONDO:0020302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Angelman syndrome","termid":"MONDO:0007113"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angelman syndrome due to maternal 15q11q13 deletion","secondary_identifiers":["GARD:19577","UMLS:C5566334","MEDGEN:1797757","Orphanet:98794"],"synonyms":[{"name":"Angelman syndrome due to maternal monosomy 15q11q13","type":"exact"}],"termid":"MONDO:0020302","xrefs":{"Monarch":{"xref_id":"0020302"}}}


id: MONDO:0006691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete causalgia (obsolete MONDO:0006691)","termid":"MONDO:0006691","xrefs":{"Monarch":{"xref_id":"0006691"}}}


id: PBO:0112274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani2/Fkbp40","termid":"PBO:0112274"}


id: GO:0099092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane forming an electron dense disc. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic density, intracellular component","termid":"GO:0099092"}


id: MONDO:0019810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toxic epidermal necrolysis (TEN) is an acute and severe skin disease with clinical and histological features characterized by the destruction and detachment of the skin epithelium and mucous membranes.","definition_xrefs":["Orphanet:95455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"toxic epidermal necrolysis","secondary_identifiers":["MedDRA:10044223","NANDO:1200246","GARD:7743","ICD9:695.15","icd11.foundation:1575072695","NANDO:2201007","SCTID:23067006","icd11.foundation:195467267","MEDGEN:4501","EFO:0004775","NCIT:C79777","UMLS:C0014518"],"synonyms":[{"name":"Lyell syndrome","type":"narrow"},{"name":"Lyell's syndrome","type":"narrow"},{"name":"SJS-TEN","type":"exact"},{"name":"Stevens-Johnson syndrome/toxic epidermal necrolysis spectrum","type":"related"},{"name":"TEN","type":"exact"},{"name":"toxic epidermolysis","type":"exact"}],"termid":"MONDO:0019810","xrefs":{"Monarch":{"xref_id":"0019810"}}}


id: PBO:0030192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_elongated_multinucleate_aseptate_vegetative_cell","termid":"PBO:0030192"}


id: FYPO:0005703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A  microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0046785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule polymerization during vegetative growth","termid":"FYPO:0007955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"decreased microtubule plus end growth rate","type":"exact"},{"name":"decreased microtubule polymerization rate","type":"exact"},{"name":"decreased rate of microtubule growth","type":"exact"},{"name":"decreased rate of microtubule polymerisation","type":"exact"},{"name":"decreased rate of microtubule polymerisation during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"reduced rate of microtubule polymerization","type":"exact"}],"termid":"FYPO:0005703"}


id: GO:0010997
data:
  {"annotated_genes":["SJAG_00071","SJAG_01330","SJAG_03858","SJAG_04671","SJAG_04853","SJAG_04699","SJAG_00666","SJAG_03809"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87897,88156,98559,99326,101475,105481,114078,114691],"is_not":false,"summary":null,"term":"GO:0010997"}]},"cv_name":"molecular_function","definition":"Binding to an anaphase-promoting complex. A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_01330":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04671":null,"SJAG_04699":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"anaphase-promoting complex binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"APC binding","type":"exact"}],"termid":"GO:0010997","terms_by_termid":{"GO:0010997":null}}


id: PBO:0058253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4540","termid":"PBO:0058253"}


id: PBO:0089330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain-containing protein Tlc4","termid":"PBO:0089330"}


id: GO:0140030
data:
  {"annotated_genes":["SJAG_04384","SJAG_00052","SJAG_02701","SJAG_04396","SJAG_00591","SJAG_00941","SJAG_02500","SJAG_00837","SJAG_00184","SJAG_05252","SJAG_03230","SJAG_01325","SJAG_03628","SJAG_02992","SJAG_03345","SJAG_02625"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036435"},{"annotations":[70090,78044,79244,74593,78093,76283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070577"},{"annotations":[76406,75320,77933,78270,77747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035064"},{"annotations":[69977,75090,77278,74835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031593"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon post-translation modification of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00184":null,"SJAG_00591":null,"SJAG_00837":null,"SJAG_00941":null,"SJAG_01325":null,"SJAG_02500":null,"SJAG_02625":null,"SJAG_02701":null,"SJAG_02992":null,"SJAG_03230":null,"SJAG_03345":null,"SJAG_03628":null,"SJAG_04384":null,"SJAG_04396":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"modification-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"modified protein binding","type":"related"}],"termid":"GO:0140030","terms_by_termid":{"GO:0031593":null,"GO:0035064":null,"GO:0036435":null,"GO:0070577":null}}


id: PBO:0088278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRG1-like transcriptional repressor, zinc finger C2H2-type","termid":"PBO:0088278"}


id: GO:0010672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["PMID:12161753","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010672)","synonyms":[{"name":"regulation of meiosis by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"}],"termid":"GO:0010672"}


id: PBO:0055889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit E","termid":"PBO:0055889"}


id: PBO:0044685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendrin","termid":"PBO:0044685"}


id: PBO:0028015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoplasmic_microtubules","termid":"PBO:0028015"}


id: GO:0106064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["PMID:29056341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"cobalamin metabolic process","termid":"GO:0009235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0033013","GO:0044281"],"is_obsolete":false,"name":"regulation of cobalamin metabolic process","termid":"GO:0106064"}


id: GO:0052818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heteroglycan + GDP-mannose = (1->3)-alpha-D-mannosylheteroglycan + GDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroglycan 3-alpha-mannosyltransferase activity (obsolete GO:0052818)","synonyms":[{"name":"heteropolysaccharide 3-alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0052818"}


id: _global:has_divisor_entity
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_divisor_entity","termid":"_global:has_divisor_entity"}


id: PBO:0038892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androglobin","termid":"PBO:0038892"}


id: PBO:0074340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3","termid":"PBO:0074340"}


id: PBO:0029414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_branched,_elongated_germ_tube","termid":"PBO:0029414"}


id: PBO:0025466
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mrc1 associates with origins later than MCM complex, but slightly earlier than Cdc45","termid":"PBO:0025466"}


id: MONDO:0004805
data:
  {"annotated_genes":["SJAG_02528","SJAG_00222","SJAG_02527","SJAG_02330","SJAG_04743","SJAG_01759","SJAG_01732","SJAG_02453","SJAG_02208","SJAG_01960","SJAG_04810","SJAG_01798","SJAG_03684","SJAG_00739","SJAG_03089","SJAG_03889"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030519"},{"annotations":[84262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[85291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[85207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[84298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011971"},{"annotations":[85325,85324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"},{"annotations":[84842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[85462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[85321,85322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[85915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[85456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008214"},{"annotations":[86552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"},{"annotations":[86009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[84932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[85939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"},{"annotations":[85854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A disease involving leukocytes.","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00739":null,"SJAG_01732":null,"SJAG_01759":null,"SJAG_01798":null,"SJAG_01960":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_02527":null,"SJAG_02528":null,"SJAG_03089":null,"SJAG_03684":null,"SJAG_03889":null,"SJAG_04743":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"leukocyte disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:288","ICD9:288.9","MEDGEN:7325","MESH:D007960","UMLS:C0023510","SCTID:54097007","DOID:9500"],"synonyms":[{"name":"disease of leukocyte","type":"exact"},{"name":"disease or disorder of leukocyte","type":"exact"},{"name":"disorder of leukocyte","type":"exact"},{"name":"disorder, leukocyte","type":"exact"},{"name":"disorders, leukocyte","type":"exact"},{"name":"leukocyte disease","type":"exact"},{"name":"leukocyte disease or disorder","type":"exact"},{"name":"leukocyte disorder","type":"exact"},{"name":"white blood cell disorder","type":"exact"}],"termid":"MONDO:0004805","terms_by_termid":{"MONDO:0008214":null,"MONDO:0009693":null,"MONDO:0009953":null,"MONDO:0010294":null,"MONDO:0010600":null,"MONDO:0011405":null,"MONDO:0011971":null,"MONDO:0011997":null,"MONDO:0012559":null,"MONDO:0014118":null,"MONDO:0030519":null,"MONDO:0032899":null,"MONDO:0044208":null,"MONDO:0957809":null,"MONDO:0958013":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0004805"}}}


id: MONDO:0100077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital alveolar dysplasia characterized anatomically by a defective and hypoplastic development of pulmonary alveoli that is commonly associated with atelectasis and can be responsible for atelectasis.","definition_xrefs":["PMID:18874463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins anomaly","termid":"MONDO:0020295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital alveolar dysplasia","secondary_identifiers":["UMLS:C0035220","MEDGEN:20539"],"synonyms":[{"name":"CAD","type":"exact"}],"termid":"MONDO:0100077","xrefs":{"Monarch":{"xref_id":"0100077"}}}


id: MONDO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hantavirus hemorrhagic fever with renal syndrome","termid":"MONDO:0005784"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Hantavirus hemorrhagic fever with renal syndrome, Dobrava-Belgrade virus type","secondary_identifiers":["DOID:0050522"],"synonyms":[{"name":"Balkan hemorrhagic fever","type":"exact"}],"termid":"MONDO:0000346","xrefs":{"Monarch":{"xref_id":"0000346"}}}


id: PBO:0003808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP/GTP exchange factor, WD repeat protein Spo14","termid":"PBO:0003808"}


id: GO:0033801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + vitexin 2''-O-beta-L-rhamnoside = S-adenosyl-L-homocysteine + 7-O-methylvitexin 2''-O-beta-L-rhamnoside.","definition_xrefs":["EC:2.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"vitexin 2''-O-rhamnoside 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4981","RHEA:11432"],"synonyms":[{"name":"S-adenosyl-L-methionine:vitexin-2''-O-beta-L-rhamnoside 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033801"}


id: GO:0050441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + glyoxylate + H2O = 3-ethylmalate + CoA + H+.","definition_xrefs":["RHEA:10500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-ethylmalate synthase activity","secondary_identifiers":["MetaCyc:3-ETHYLMALATE-SYNTHASE-RXN","EC:2.3.3.7","KEGG_REACTION:R01180"],"synonyms":[{"name":"2-ethyl-3-hydroxybutanedioate synthase activity","type":"related"},{"name":"3-ethylmalate glyoxylate-lyase (CoA-butanoylating) activity","type":"related"},{"name":"butanoyl-CoA:glyoxylate C-butanoyltransferase (thioester-hydrolysing, 1-carboxypropyl-forming)","type":"related"}],"termid":"GO:0050441"}


id: PBO:0040302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase plasma membrane Ca2+ transporting 4","termid":"PBO:0040302"}


id: GO:0003418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the growth of a bone. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:0003413"},{"relation_name":"part_of","term_name":"growth plate cartilage development","termid":"GO:0003417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}


id: GO:0048611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic digestive tract development","termid":"GO:0048566"},{"relation_name":"part_of","term_name":"ectodermal digestive tract development","termid":"GO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic ectodermal digestive tract development","synonyms":[{"name":"embryonic ectodermal gut development","type":"related"}],"termid":"GO:0048611"}


id: GO:0060200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing acetylcholine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle","type":"exact"}],"termid":"GO:0060200"}


id: FYPO:0007966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which heterothallic haploid cells failing chromosome segregation and  consequently nuclear division fail to displace the nucleus from the septation site. This is normally mediated by actin cables.","definition_xrefs":["PMID:33506191","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"},{"relation_name":"output_of","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"output_of","term_name":"abnormal actin cables","termid":"FYPO:0002435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000337","FYPO:0000631","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"abolished nuclear displacement from cell division site after abolished mitotic sister chromatid separation","termid":"FYPO:0007966"}


id: GO:0102084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-dopa + S-adenosyl-L-methionine = 3-O-methyldopa + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete L-dopa O-methyltransferase activity (obsolete GO:0102084)","termid":"GO:0102084"}


id: FYPO:0005931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the silent mating-type cassettes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:24662054","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased nucleosome occupancy at silent mating-type cassette","synonyms":[{"name":"decreased nucleosome occupancy at mating-type region heterochromatin","type":"exact"},{"name":"decreased nucleosome occupancy at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in silent mating-type cassette","type":"exact"},{"name":"reduced nucleosome occupancy at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0005931"}


id: GO:0141189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A phospholipase C-activating receptor G protein-coupled receptor signaling pathway that starts with an opsin being activated by a photon, and ending with the light signal being trasmitted through the synapses. Opsins are G-protein coupled receptors which bind light-sensitive chromophores.","definition_xrefs":["PMID:36272560","PMID:19720651"],"gene_count":0,"genotype_count":0,"name":"obsolete G protein mediated opsin signaling pathway (obsolete GO:0141189)","synonyms":[{"name":"G protein-mediated opsin signaling pathway","type":"exact"},{"name":"PLC-activating phototransduction-mediated signaling pathway","type":"exact"},{"name":"phospholipase C-activating G protein-mediated phototransduction signaling pathway","type":"exact"},{"name":"phospholipase C-activating phototransduction signaling pathway","type":"exact"},{"name":"phospholipase C-activating phototransduction-mediated G-protein coupled receptor signaling pathway","type":"exact"},{"name":"phototransduction-mediated G protein signaling, coupled to IP3 second messenger","type":"exact"},{"name":"phototransduction-mediated G protein signalling, coupled to IP3 second messenger","type":"exact"},{"name":"phototransduction-mediated G-protein signaling, coupled to IP3 second messenger","type":"exact"},{"name":"phototransduction-mediated G-protein signalling, coupled to IP3 second messenger","type":"exact"}],"termid":"GO:0141189"}


id: PBO:0075914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 6","termid":"PBO:0075914"}


id: SO:0001137
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type II:A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles: Residue(i+1): -140 degrees < phi < -20 degrees, +80 degrees < psi < +180 degrees. Residue(i+2): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_right_handed_type_two","secondary_identifiers":["BS:00214"],"synonyms":[{"name":"beta turn right handed type two","type":"exact"},{"name":"beta_turn_iir","type":"exact"},{"name":"type II beta turn","type":"exact"},{"name":"type II turn","type":"exact"}],"termid":"SO:0001137"}


id: PBO:0040165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylserotonin O-methyltransferase","termid":"PBO:0040165"}


id: MONDO:0013969
data:
  {"annotated_genes":["SJAG_02548","SJAG_01174"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86419,86420],"is_not":false,"summary":null,"term":"MONDO:0013969"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the RMND1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01174":null,"SJAG_02548":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111481","GARD:17487","OMIM:614922","MEDGEN:1682397","UMLS:C5190991","Orphanet:324535"],"synonyms":[{"name":"COXPD11","type":"exact"},{"name":"Encephaloneuromyopathy, infantile, due to mitochondrial translation defect","type":"related"},{"name":"RMND1 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 11","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 11","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in RMND1","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 11","type":"exact"}],"termid":"MONDO:0013969","terms_by_termid":{"MONDO:0013969":null},"xrefs":{"Monarch":{"xref_id":"0013969"}}}


id: PBO:0109970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rieske iron-sulfur protein, ubiquinol-cytochrome-c reductase complex subunit 5, Rip1","termid":"PBO:0109970"}


id: PBO:0066536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSG2 antisense RNA 1","termid":"PBO:0066536"}


id: PBO:0003481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase binding protein Rid1 (predicted)","termid":"PBO:0003481"}


id: PBO:0017409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_improper_part","termid":"PBO:0017409"}


id: PBO:0038572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABR antisense RNA 1","termid":"PBO:0038572"}


id: PR:Q10161
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A clathrin heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin heavy chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.05","secondary_identifiers":["UniProtKB:Q10161"],"synonyms":[{"name":"Spom972h-CLTC","type":"exact"}],"termid":"PR:Q10161"}


id: PBO:0072292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 10","termid":"PBO:0072292"}


id: PBO:0001965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone Rtt106-like (predicted)","termid":"PBO:0001965"}


id: MONDO:0031009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Glanzmann thrombasthenia","termid":"MONDO:0100326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Glanzmann thrombasthenia 2","secondary_identifiers":["GARD:16439","OMIM:619267","UMLS:C5543273","MEDGEN:1782592"],"synonyms":[{"name":"GT2","type":"exact"},{"name":"Glanzmann thrombasthenia 2","type":"exact"},{"name":"bleeding disorder, platelet-type, 23","type":"exact"}],"termid":"MONDO:0031009","xrefs":{"Monarch":{"xref_id":"0031009"}}}


id: MONDO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cronkhite-Canada syndrome (obsolete MONDO:0003815)","termid":"MONDO:0003815","xrefs":{"Monarch":{"xref_id":"0003815"}}}


id: PBO:0068570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 21, pseudogene","termid":"PBO:0068570"}


id: PBO:0028083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology","termid":"PBO:0028083"}


id: PBO:0043734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 13","termid":"PBO:0043734"}


id: GO:2000984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP citrate synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of ATP citrate synthase activity","termid":"GO:2000983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATP citrate synthase activity","synonyms":[{"name":"negative regulation of ATP citrate (pro-S)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citrate (pro-S-)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citric lyase activity","type":"exact"},{"name":"negative regulation of ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"exact"},{"name":"negative regulation of ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"negative regulation of acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"negative regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"exact"},{"name":"negative regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"exact"},{"name":"negative regulation of adenosine triphosphate citrate lyase activity","type":"exact"},{"name":"negative regulation of citrate cleavage enzyme activity","type":"related"},{"name":"negative regulation of citrate-ATP lyase activity","type":"exact"},{"name":"negative regulation of citric cleavage enzyme activity","type":"related"}],"termid":"GO:2000984"}


id: PBO:0072439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 3","termid":"PBO:0072439"}


id: PBO:0047547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 6","termid":"PBO:0047547"}


id: FYPO:0003564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I is abnormal.","definition_xrefs":["GO:0042138","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"}


id: MONDO:0011000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2E","secondary_identifiers":["OMIM:601138"],"synonyms":[{"name":"GC-E","type":"related"},{"name":"GUCY2E","type":"related"},{"name":"GUCY2EP","type":"related"},{"name":"Gucy2D, mouse, homolog of","type":"related"},{"name":"guanylate cyclase 2E","type":"exact"},{"name":"guanylate cyclase 2E, pseudogene","type":"related"},{"name":"guanylate cyclase type 2E","type":"exact"},{"name":"guanylyl cyclase, Membrane, type E","type":"related"}],"termid":"MONDO:0011000","xrefs":{"Monarch":{"xref_id":"0011000"}}}


id: PBO:0055309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2736","termid":"PBO:0055309"}


id: SO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding exon in the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_exon","termid":"SO:0000198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_noncoding_exon","synonyms":[{"name":"three prime noncoding exon","type":"exact"}],"termid":"SO:0000444"}


id: GO:0005649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transportin (obsolete GO:0005649)","synonyms":[{"name":"karyopherin-beta2","type":"exact"},{"name":"transportin","type":"exact"}],"termid":"GO:0005649"}


id: GO:0032271
data:
  {"annotated_genes":["SJAG_04100","SJAG_00521","SJAG_03086","SJAG_02566","SJAG_00279","SJAG_01993","SJAG_02700","SJAG_01894","SJAG_04479"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91527,98093,113451,87468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[100934,101924,104329,89886,89034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process of creating protein polymers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of protein polymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein polymerisation","type":"exact"}],"termid":"GO:0032271","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: PBO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit Snt2","termid":"PBO:0001259"}


id: GO:0010570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which a multicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:jp","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"regulates","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth","termid":"GO:0010570"}


id: PR:000028945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase oxidized form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA/Ox+","pombase_gene_id":"SPAC29E6.05c","synonyms":[{"name":"MSRA/Ox+","type":"exact"},{"name":"PomBase_original_PRO_term_name: peptide methionine sulfoxide reductase oxidized form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-MSRA/Ox+","type":"exact"}],"termid":"PR:000028945"}


id: GO:1902556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of phosphatidylinositol transporter activity.","definition_xrefs":["GOC:bhm","PMID:9890948","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol transporter complex","termid":"GO:1902556"}


id: PBO:0072543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 73","termid":"PBO:0072543"}


id: PBO:0067530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 674, pseudogene","termid":"PBO:0067530"}


id: GO:0030144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl,1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-(N-acetyl-beta-D-glucosaminyl-1,6)-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R. Only branched mannose glycopeptides with non-reducing N-acetylglucosamine terminal residues act as acceptors.","definition_xrefs":["EC:2.4.1.155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0140096","GO:0016757"],"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9696980","Reactome:R-HSA-975916","MetaCyc:2.4.1.155-RXN","RHEA:16921"],"synonyms":[{"name":"GnTV activity","type":"related"},{"name":"N-acetylglucosaminyltransferase V activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:6-[2-(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl]-glycoprotein 6-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine:alpha-mannoside-beta-1,6 N-acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine:alpha-mannoside-beta1,6 N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3(6)-mannosylglycoprotein beta-1,6-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"alpha-mannoside beta-1,6-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-alpha-mannoside beta-1->6-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-alpha-mannoside beta1->6-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0030144"}


id: GO:0015503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(in) + H+(out) = K+(out) + H+(in), where glutathione maintains the closed state.","definition_xrefs":["PMID:11053405","TC:2.A.37.1.1","TC:2.A.37.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glutathione-regulated potassium exporter activity","termid":"GO:0015503"}


id: GO:0005251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a delayed rectifying voltage-gated channel. A delayed rectifying current-voltage relation is one where channel activation kinetics are time-dependent, and inactivation is slow.","definition_xrefs":["PMID:11343411","PMID:2462513","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"delayed rectifier potassium channel activity","secondary_identifiers":["Reactome:R-HSA-5577050","Reactome:R-HSA-5577237"],"termid":"GO:0005251"}


id: MONDO:1010682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in zebra finch.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, zebra finch","secondary_identifiers":["OMIA:000038-59729"],"termid":"MONDO:1010682","xrefs":{"Monarch":{"xref_id":"1010682"}}}


id: GO:0042450
data:
  {"annotated_genes":["SJAG_00412","SJAG_00695","SJAG_00392","SJAG_00635","SJAG_01461","SJAG_00636","SJAG_01592","SJAG_04577","SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97352,97361,101804,102624,105676,109608,110218,111046,117509],"is_not":false,"summary":null,"term":"GO:0042450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"arginine biosynthetic process via ornithine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine anabolism via ornithine","type":"exact"},{"name":"arginine formation via ornithine","type":"exact"},{"name":"arginine synthesis via ornithine","type":"exact"}],"termid":"GO:0042450","terms_by_termid":{"GO:0042450":null}}


id: PBO:0064335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLSCR4 pseudogene 1","termid":"PBO:0064335"}


id: PBO:0034704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1","termid":"PBO:0034704"}


id: PBO:0018131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase Gud1 (predicted)","termid":"PBO:0018131"}


id: GO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The adenylylation of peptidyl-tyrosine to form peptidyl-O4'-(phospho-5'-adenosine)-L-tyrosine.","definition_xrefs":["RESID:AA0203"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine adenylylation (obsolete GO:0018254)","synonyms":[{"name":"peptidyl-tyrosine adenylation","type":"exact"}],"termid":"GO:0018254"}


id: GO:0003795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, microbial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antimicrobial peptide activity (obsolete GO:0003795)","synonyms":[{"name":"antimicrobial peptide activity","type":"exact"}],"termid":"GO:0003795"}


id: PBO:0062422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 83 pseudogene","termid":"PBO:0062422"}


id: PBO:0048581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 5","termid":"PBO:0048581"}


id: PBO:0086532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene MID2","termid":"PBO:0086532"}


id: PBO:0027972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_succinate_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0027972"}


id: GO:0008370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. These are terms that have been removed from the active component ontology.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular component (obsolete GO:0008370)","termid":"GO:0008370"}


id: GO:0044800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The membrane organization process that joins two lipid bilayers to form a single membrane, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane fusion (obsolete GO:0044800)","termid":"GO:0044800"}


id: MOD:00308
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an L-glutamine residue to form a carboxyl-terminal L-glutamimide.","definition_xrefs":["PubMed:12771378","RESID:AA0303","PubMed:14593103","Unimod:23#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"dehydrated residue","termid":"MOD:00704"},{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamimide","synonyms":[{"name":"(3S)-3-aminopiperidine-2,6-dione","type":"exact"},{"name":"2-aminopentanimide","type":"exact"},{"name":"3-amino-2,6-piperidinedione","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"L-glutamimide","type":"exact"},{"name":"alpha-aminoglutarimide","type":"exact"}],"termid":"MOD:00308"}


id: GO:0006566
data:
  {"annotated_genes":["SJAG_00432","SJAG_00234","SJAG_03141","SJAG_02450","SJAG_00830","SJAG_00881","SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105152,114919,100023,109811,111111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[76762,93404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00432":null,"SJAG_00830":null,"SJAG_00881":null,"SJAG_02450":null,"SJAG_03141":null,"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"threonine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine and threonine metabolic process","type":"broad"},{"name":"methionine and threonine metabolism","type":"broad"},{"name":"threonine metabolism","type":"exact"}],"termid":"GO:0006566","terms_by_termid":{"GO:0006567":null,"GO:0009088":null}}


id: PBO:0081131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP3 zinc finger protein","termid":"PBO:0081131"}


id: GO:0070207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein homotrimer, a macromolecular structure consisting of three noncovalently associated identical subunits.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein homooligomerization","termid":"GO:0051260"},{"relation_name":"is_a","term_name":"protein trimerization","termid":"GO:0070206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein homotrimerization","synonyms":[{"name":"protein homotrimer assembly","type":"exact"},{"name":"protein homotrimer biosynthesis","type":"exact"},{"name":"protein homotrimer biosynthetic process","type":"exact"},{"name":"protein homotrimer formation","type":"exact"}],"termid":"GO:0070207"}


id: FYPO:0001556
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118560,118561,118564,118568,118573,118576],"is_not":false,"summary":null,"term":"FYPO:0001556"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more nuclear envelope than normal. Excess nuclear envelopes may take the form of intranuclear membrane stacks or invaginations, or small cytoplasmic spheres that are attached to the nucleus, have double lipid bilayer membranes, and may contain structures resembling nuclear pores.","definition_xrefs":["PMID:22156749","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002403","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"excess nuclear envelope present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_01906","SJAG_03940"],"single_locus_genotype_uniquenames":["ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","nem1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"excess nuclear envelope present during mitotic cell cycle","type":"related"},{"name":"excess nuclear envelope present during vegetative growth","type":"exact"},{"name":"increased nuclear envelope proliferation","type":"related"},{"name":"nuclear envelope present in greater amount","type":"exact"}],"termid":"FYPO:0001556","terms_by_termid":{"FYPO:0001556":null,"FYPO_EXT:0000001":null}}


id: PBO:0013056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp3","termid":"PBO:0013056"}


id: GO:0018401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase.","definition_xrefs":["RESID:AA0030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxyproline metabolic process","termid":"GO:0019471"},{"relation_name":"is_a","term_name":"peptidyl-proline hydroxylation","termid":"GO:0019511"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation to 4-hydroxy-L-proline","termid":"GO:0018401"}


id: PBO:0059358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 3","termid":"PBO:0059358"}


id: MONDO:0021312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the adrenal cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland cancer","termid":"MONDO:0002817"},{"relation_name":"is_a","term_name":"adrenal cortex neoplasm","termid":"MONDO:0036591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant tumor of adrenal cortex","secondary_identifiers":["NCIT:C9327","SCTID:371964008","MEDGEN:83425","UMLS:C0346402"],"synonyms":[{"name":"adrenal cortex cancer","type":"exact"},{"name":"cancer of adrenal cortex","type":"exact"},{"name":"malignant adrenal cortex neoplasm","type":"exact"},{"name":"malignant adrenal cortex tumor","type":"exact"},{"name":"malignant adrenal cortex tumour","type":"exact"},{"name":"malignant adrenocortical neoplasm","type":"exact"},{"name":"malignant adrenocortical tumor","type":"exact"},{"name":"malignant adrenocortical tumour","type":"exact"},{"name":"malignant neoplasm of adrenal cortex","type":"exact"},{"name":"malignant neoplasm of the adrenal cortex","type":"exact"},{"name":"malignant tumor of the adrenal cortex","type":"exact"},{"name":"malignant tumour of the adrenal cortex","type":"exact"}],"termid":"MONDO:0021312","xrefs":{"Monarch":{"xref_id":"0021312"}}}


id: GO:0032882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chitin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"chitin metabolic process","termid":"GO:0006030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of chitin metabolic process","synonyms":[{"name":"regulation of chitin metabolism","type":"exact"}],"termid":"GO:0032882"}


id: PBO:0071294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 17","termid":"PBO:0071294"}


id: GO:0031880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 somatostatin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 3 somatostatin receptor binding","synonyms":[{"name":"type 3 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031880"}


id: PBO:0040457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting non-gastric alpha2 subunit","termid":"PBO:0040457"}


id: GO:0014823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an activity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to activity","synonyms":[{"name":"response to exercise","type":"related"}],"termid":"GO:0014823"}


id: PBO:0028205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_synthesis","termid":"PBO:0028205"}


id: GO:1902583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An intracellular transport which involves another organism.","definition_xrefs":["GOC:jl","GO_REF:0000089","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism intracellular transport (obsolete GO:1902583)","synonyms":[{"name":"multi organism intracellular transport","type":"exact"}],"termid":"GO:1902583"}


id: PBO:0055721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin B1","termid":"PBO:0055721"}


id: GO:1902210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bacterial-type flagellum assembly.","definition_xrefs":["GOC:TermGenie","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of bacterial-type flagellum assembly","termid":"GO:1902208"},{"relation_name":"positively_regulates","term_name":"bacterial-type flagellum assembly","termid":"GO:0044780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of bacterial-type flagellum assembly","synonyms":[{"name":"activation of bacterial flagellum assembly","type":"narrow"},{"name":"activation of bacterial-type flagellum assembly","type":"narrow"},{"name":"positive regulation of bacterial flagellum assembly","type":"exact"},{"name":"up regulation of bacterial flagellum assembly","type":"exact"},{"name":"up regulation of bacterial-type flagellum assembly","type":"exact"},{"name":"up-regulation of bacterial flagellum assembly","type":"exact"},{"name":"up-regulation of bacterial-type flagellum assembly","type":"exact"},{"name":"upregulation of bacterial flagellum assembly","type":"exact"},{"name":"upregulation of bacterial-type flagellum assembly","type":"exact"}],"termid":"GO:1902210"}


id: PBO:0050576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 1","termid":"PBO:0050576"}


id: MONDO:0015347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multicentric reticulohistiocytosis (MRH) is a rare non-Langerhans cell histiocytosis characterized by the association of specific nodular skin lesions and destructive arthritis.","definition_xrefs":["Orphanet:139436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"multicentric reticulohistiocytosis","secondary_identifiers":["DOID:11824","UMLS:C0311284","ICD9:272.8","MedDRA:10070595","ICD9:713.0","NCIT:C27896","SCTID:84241008","icd11.foundation:977116795","GARD:7103","MEDGEN:86315"],"synonyms":[{"name":"giant cell histiocytomatosis","type":"exact"},{"name":"lipoid dermatoarthritis","type":"exact"},{"name":"multicentric reticulohistiocytosis","type":"exact"}],"termid":"MONDO:0015347","xrefs":{"Monarch":{"xref_id":"0015347"}}}


id: GO:1904686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle disassembly.","definition_xrefs":["GO_REF:0000058","PMID:25963819","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle disassembly","termid":"GO:0051228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle disassembly","synonyms":[{"name":"regulation of mitotic spindle breakdown","type":"exact"},{"name":"regulation of mitotic spindle catabolism","type":"exact"},{"name":"regulation of mitotic spindle degradation","type":"exact"},{"name":"regulation of spindle breakdown during mitosis","type":"exact"},{"name":"regulation of spindle degradation during mitosis","type":"exact"},{"name":"regulation of spindle disassembly during mitosis","type":"exact"}],"termid":"GO:1904686"}


id: PBO:0057164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320b-2","termid":"PBO:0057164"}


id: FYPO:0003220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 9 and 14 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal histone H3-K9K14 acetylation during vegetative growth (obsolete FYPO:0003220)","synonyms":[{"name":"normal histone H3 K9K14 acetylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 and K14 acetylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K9K14 acetylation during mitotic cell cycle","type":"related"},{"name":"normal histone lysine H3 K9K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003220"}


id: GO:1900933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nonadec-1-ene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene metabolic process","termid":"GO:1900932"},{"relation_name":"negatively_regulates","term_name":"nonadec-1-ene metabolic process","termid":"GO:1900876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of nonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of nonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of nonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900933"}


id: GO:0061087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K27 methylation (obsolete GO:0061087)","termid":"GO:0061087"}


id: FYPO:0008119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal cell morphology (i.e. size, shape, and structure indistinguishable from wild type) when the cell is subject to phophate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal morphology during phosphate starvation","termid":"FYPO:0008119"}


id: MONDO:0013671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any complete hydatidiform mole in which the cause of the disease is a mutation in the KHDC3L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"complete hydatidiform mole","termid":"MONDO:0016785"},{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole, recurrent, 2","secondary_identifiers":["GARD:18366","OMIM:614293","UMLS:C3280352","MEDGEN:481982"],"synonyms":[{"name":"HYDM2","type":"related"},{"name":"KHDC3L complete hydatidiform mole","type":"exact"},{"name":"complete hydatidiform mole caused by mutation in KHDC3L","type":"exact"},{"name":"hydatidiform MOLE, recurrent, 2","type":"related"},{"name":"hydatidiform Mole, complete","type":"related"},{"name":"hydatidiform Mole, recurrent, type 2","type":"exact"},{"name":"hydatidiform mole, recurrent, 2","type":"exact"}],"termid":"MONDO:0013671","xrefs":{"Monarch":{"xref_id":"0013671"}}}


id: MONDO:1012506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative encephalopathy, non-human animal","termid":"MONDO:1011894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative encephalopathy, dog","secondary_identifiers":["OMIA:002055-9615"],"termid":"MONDO:1012506","xrefs":{"Monarch":{"xref_id":"1012506"}}}


id: PBO:0060110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 11","termid":"PBO:0060110"}


id: FYPO:0001581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are more visible (usually by microscopy) than normal. A vacuolated phenotype may be due to the presence of more vacuoles in a cell than normal, or to vacuoles located nearer the cell surface (and hence more visible) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"vacuolated","synonyms":[{"name":"vacuolated during mitotic cell cycle","type":"related"},{"name":"vacuolated during vegetative growth","type":"exact"}],"termid":"FYPO:0001581"}


id: PBO:0080286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 49 pseudogene","termid":"PBO:0080286"}


id: MONDO:1011799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited periodic spasticity, non-human animal","secondary_identifiers":["OMIA:001453"],"termid":"MONDO:1011799","xrefs":{"Monarch":{"xref_id":"1011799"}}}


id: PBO:0039137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense of IGF2R non-protein coding RNA","termid":"PBO:0039137"}


id: GO:0061523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of a cilium.","definition_xrefs":["PMID:17604723","PMID:27350441","GOC:cilia","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium organization","termid":"GO:0044782"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium disassembly","synonyms":[{"name":"cilium resorption","type":"exact"}],"termid":"GO:0061523"}


id: GO:0042360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin E metabolic process","synonyms":[{"name":"alpha-tocopherol metabolic process","type":"narrow"},{"name":"alpha-tocopherol metabolism","type":"narrow"},{"name":"tocopherol metabolic process","type":"exact"},{"name":"tocopherol metabolism","type":"exact"},{"name":"vitamin E metabolism","type":"exact"}],"termid":"GO:0042360"}


id: PBO:0061361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 21","termid":"PBO:0061361"}


id: PBO:0039408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 11","termid":"PBO:0039408"}


id: PBO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKA","termid":"PBO:0002270"}


id: GO:0033454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"GCC codon-amino acid adaptor activity","synonyms":[{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033454"}


id: PBO:0043614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4 pseudogene 2","termid":"PBO:0043614"}


id: GO:1901253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intracellular transport of viral material.","definition_xrefs":["GOC:bf","GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport of viral material","termid":"GO:1901252"},{"relation_name":"is_a","term_name":"negative regulation of viral life cycle","termid":"GO:1903901"},{"relation_name":"negatively_regulates","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular transport of viral material","synonyms":[{"name":"down regulation of egress of virus within host cell","type":"exact"},{"name":"down regulation of movement of virus within host cell","type":"exact"},{"name":"down regulation of viral egress","type":"exact"},{"name":"down-regulation of egress of virus within host cell","type":"exact"},{"name":"down-regulation of movement of virus within host cell","type":"exact"},{"name":"down-regulation of viral egress","type":"exact"},{"name":"downregulation of egress of virus within host cell","type":"exact"},{"name":"downregulation of movement of virus within host cell","type":"exact"},{"name":"downregulation of viral egress","type":"exact"},{"name":"inhibition of egress of virus within host cell","type":"narrow"},{"name":"inhibition of movement of virus within host cell","type":"exact"},{"name":"inhibition of viral egress","type":"exact"},{"name":"negative regulation of egress of virus within host cell","type":"related"},{"name":"negative regulation of movement of virus within host cell","type":"exact"},{"name":"negative regulation of viral egress","type":"exact"}],"termid":"GO:1901253"}


id: PBO:0074107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 28 member 3","termid":"PBO:0074107"}


id: GO:0047837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylose + NADP+ = D-xylono-1,5-lactone + H+ + NADPH.","definition_xrefs":["RHEA:22000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-xylose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.179","KEGG_REACTION:R01430","MetaCyc:D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"D-xylose (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"D-xylose-NADP dehydrogenase activity","type":"related"},{"name":"D-xylose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"D-xylose:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047837"}


id: FYPO:0006418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cleavage and rejoining of intermediates formed during meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal resolution of meiotic recombination intermediates","termid":"FYPO:0006418"}


id: MONDO:0009476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atresia of small intestine is a special form of intestinal atresia with absence of mesentery, which is most likely due to an intrauterine intestinal vascular accident. Newborns are usually preterm infants with low birth-weights, that encounter feeding difficulties (including vomiting with initial feeds, which may later worsened and the abdomen becomes progressively distended) as well as failure to thrive. Affected children present disrupted bowel loops assuming a spiral configuration resembling an 'apple peel' and may have less than half of the normal length of the small bowel and a physiologically short bowel. Atresia of small intestine is characterized by jejunal atresia near the ligament of Treitz, foreshortened bowel, and a large mesenteric gap. The bowel distal to the atresia is precariously supplied. Atresia of small intestine may be a manifestation of cystic fibrosis. The most important cause of mortality is short bowel syndrome, encountered in 65% of cases.","definition_xrefs":["Orphanet:1201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"atresia of small intestine","secondary_identifiers":["NCIT:C98828","MEDGEN:78590","NORD:1309","OMIM:243600","GARD:140","icd11.foundation:1949256262","MedDRA:10010626","MESH:C538260","UMLS:C0266172"],"synonyms":[{"name":"APSB","type":"related"},{"name":"Jejunal Atresia","type":"exact"},{"name":"Jejunoileal atresia","type":"exact"},{"name":"apple peel small bowel syndrome","type":"related"},{"name":"apple peel syndrome","type":"exact"},{"name":"apple-peel intestinal atresia","type":"related"},{"name":"atresia of the small intestine","type":"exact"},{"name":"congenital atresia of the small intestine","type":"related"},{"name":"congenital small intestine atresia","type":"exact"},{"name":"familial apple peel jejunal atresia","type":"related"},{"name":"intestinal atresia type IIIb","type":"exact"},{"name":"jejunal atresia","type":"exact"},{"name":"small intestinal atresia","type":"exact"},{"name":"small intestine atresia","type":"exact"}],"termid":"MONDO:0009476","xrefs":{"Monarch":{"xref_id":"0009476"}}}


id: PBO:0081737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 668","termid":"PBO:0081737"}


id: GO:0046261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-nitrotoluene, 1-methyl-4-nitrobenzene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-nitrotoluene biosynthetic process (obsolete GO:0046261)","synonyms":[{"name":"4-nitrotoluene anabolism","type":"exact"},{"name":"4-nitrotoluene biosynthesis","type":"exact"},{"name":"4-nitrotoluene biosynthetic process","type":"exact"},{"name":"4-nitrotoluene formation","type":"exact"},{"name":"4-nitrotoluene synthesis","type":"exact"},{"name":"4NT biosynthesis","type":"exact"},{"name":"4NT biosynthetic process","type":"exact"}],"termid":"GO:0046261"}


id: FYPO:0000152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to nitrogen starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation","termid":"FYPO:0000713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular response to nitrogen starvation","synonyms":[{"name":"abnormal cellular response to nitrogen depletion","type":"exact"},{"name":"abnormal cellular response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000152"}


id: PBO:0109091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 5","termid":"PBO:0109091"}


id: PBO:0045065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 4","termid":"PBO:0045065"}


id: PR:O74374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoglucomutase-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR22573:SF5","OMA:SCHPO03429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.10","secondary_identifiers":["UniProtKB:O74374"],"synonyms":[{"name":"PGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGM1","type":"exact"},{"name":"glucose phosphomutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74374"}


id: GO:2000461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of eukaryotic cell surface binding (obsolete GO:2000461)","synonyms":[{"name":"negative regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000461"}


id: GO:0006550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucine metabolic process","termid":"GO:0006549"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"isoleucine catabolic process","secondary_identifiers":["MetaCyc:ILEUDEG-PWY"],"synonyms":[{"name":"isoleucine breakdown","type":"exact"},{"name":"isoleucine catabolism","type":"exact"},{"name":"isoleucine degradation","type":"exact"}],"termid":"GO:0006550"}


