# terms

id: PBO:0077177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 1","termid":"PBO:0077177"}


id: GO:0018628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + terephthalate = (3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate + NAD+.","definition_xrefs":["RHEA:10312","EC:1.14.12.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"terephthalate 1,2-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0150","MetaCyc:1.14.12.15-RXN","KEGG_REACTION:R05148"],"synonyms":[{"name":"1,4-dicarboxybenzoate 1,2-dioxygenase activity","type":"related"},{"name":"benzene-1,4-dicarboxylate 1,2-dioxygenase activity","type":"related"},{"name":"benzene-1,4-dicarboxylate,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018628"}


id: MONDO:0004471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The inflammation of one or more joints caused by a bacterial infection within the joint space. Symptoms include pain, stiffness, and decreased range of motion in the affected joint.","definition_xrefs":["NCIT:C26699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"infective arthritis","termid":"MONDO:0042485"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial arthritis","secondary_identifiers":["ICD9:711.9","ICD9:711.93","SCTID:48245008","ICD9:711.96","ICD9:711.0","ICD9:711.40","ICD9:711.92","ICD9:711.94","NANDO:2200437","DOID:813","ICD9:711.91","UMLS:C1692886","MEDGEN:308434","ICD9:711.97","ICD9:711.90","ICD9:711.95","EFO:1001351","MESH:D001170"],"synonyms":[{"name":"infectious arthritis","type":"broad"},{"name":"pyogenic arthritis","type":"exact"},{"name":"septic arthritis","type":"exact"}],"termid":"MONDO:0004471","xrefs":{"Monarch":{"xref_id":"0004471"}}}


id: PBO:0041051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 2","termid":"PBO:0041051"}


id: PBO:0071707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 5","termid":"PBO:0071707"}


id: MONDO:0044714
data:
  {"annotated_genes":["SJAG_02265"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84488],"is_not":false,"summary":null,"term":"MONDO:0044714"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial myopathy-cerebellar ataxia-pigmentary retinopathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4540096","GARD:17934","MEDGEN:1620960","OMIM:617675","Orphanet:502423"],"synonyms":[{"name":"MMYAT","type":"related"},{"name":"mitochondrial myopathy-cerebellar atrophy-pigmentary retinopathy syndrome","type":"exact"},{"name":"myopathy, mitochondrial, and ataxia","type":"related"}],"termid":"MONDO:0044714","terms_by_termid":{"MONDO:0044714":null},"xrefs":{"Monarch":{"xref_id":"0044714"}}}


id: MONDO:0020179
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A melanocytic nevus that involves the skin of eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"benign tumor of palpebral epidermis","termid":"MONDO:0020173"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"palpebral nevus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:231827008","MEDGEN:65985","NCIT:C3880","Orphanet:98588","UMLS:C0239460"],"synonyms":[{"name":"eyelid nevus","type":"exact"},{"name":"melanocytic nevus of skin of eyelid","type":"exact"},{"name":"nevus of eyelid","type":"exact"},{"name":"nevus of the eyelid","type":"exact"},{"name":"skin of eyelid melanocytic nevus","type":"exact"}],"termid":"MONDO:0020179","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0020179"}}}


id: MONDO:0013894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extremely rare primordial dwarfism characterized by short stature, onychodysplasia, facial dysmorphism and hypotrichosis, which is caused by biallelic mutations in the POC1A gene.","definition_xrefs":["PMID:26791357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-onychodysplasia-facial dysmorphism-hypotrichosis syndrome","secondary_identifiers":["OMIM:614813","UMLS:C3542022","MEDGEN:762199","Orphanet:314394","GARD:17419"],"synonyms":[{"name":"short stature, onychodysplasia, facial dysmorphism, and hypotrichosis","type":"related"},{"name":"soft","type":"related"},{"name":"soft syndrome","type":"exact"}],"termid":"MONDO:0013894","xrefs":{"Monarch":{"xref_id":"0013894"}}}


id: PBO:0062384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 2 pseudogene","termid":"PBO:0062384"}


id: PBO:0045872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 5","termid":"PBO:0045872"}


id: SO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a nucleic acid molecule which controls its own replication through the interaction of specific proteins at one or more origins of replication.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosome"],"termid":"SO:0000340"}


id: MONDO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the small intestine. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C4638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0002995"},{"relation_name":"is_a","term_name":"intestinal neuroendocrine tumor G1","termid":"MONDO:0021533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestinal neuroendocrine tumor G1","secondary_identifiers":["SCTID:276818002","UMLS:C0349536","MEDGEN:91150","DOID:0050925"],"synonyms":[{"name":"carcinoid tumor of small bowel","type":"exact"},{"name":"carcinoid tumor of small intestine","type":"exact"},{"name":"carcinoid tumor of the small bowel","type":"exact"},{"name":"carcinoid tumor of the small intestine","type":"exact"},{"name":"carcinoid tumour of small bowel","type":"exact"},{"name":"carcinoid tumour of small intestine","type":"exact"},{"name":"carcinoid tumour of the small bowel","type":"exact"},{"name":"carcinoid tumour of the small intestine","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of small intestine","type":"exact"},{"name":"small bowel carcinoid tumor","type":"exact"},{"name":"small bowel carcinoid tumour","type":"exact"},{"name":"small intestinal NET G1","type":"exact"},{"name":"small intestinal carcinoid tumor","type":"exact"},{"name":"small intestinal carcinoid tumour","type":"exact"},{"name":"small intestinal neuroendocrine tumor G1","type":"exact"},{"name":"small intestine NET G1","type":"exact"},{"name":"small intestine carcinoid neuroendocrine tumor","type":"related"},{"name":"small intestine carcinoid neuroendocrine tumour","type":"related"},{"name":"small intestine carcinoid tumor","type":"exact"},{"name":"small intestine carcinoid tumor (disease)","type":"exact"},{"name":"small intestine carcinoid tumour","type":"exact"},{"name":"small intestine carcinoid tumour (disease)","type":"exact"},{"name":"small intestine neuroendocrine neoplasm G1","type":"exact"},{"name":"small intestine neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0000540","xrefs":{"Monarch":{"xref_id":"0000540"}}}


id: GO:1901568
data:
  {"annotated_genes":["SJAG_04007","SJAG_03909","SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[112552,104756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acid derivative.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid derivative metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid derivative metabolism","type":"exact"}],"termid":"GO:1901568","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: PBO:0040713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 antisense RNA 1","termid":"PBO:0040713"}


id: PBO:0078442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma constant 2","termid":"PBO:0078442"}


id: MONDO:0100290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of multiple serrated polyps in the colon. The polyps are predominantly sessile serrated adenomas/polyps. A minority of the polyps are microvesicular variants of hyperplastic polyps. According to some authors, the polyps are proximal to the sigmoid colon. According to others, the polyps are distributed throughout the entire colon.","definition_xrefs":["NCIT:C96470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplastic polyposis syndrome","termid":"MONDO:0015524"},{"relation_name":"is_a","term_name":"polyp of colon","termid":"MONDO:0021400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon serrated polyposis","secondary_identifiers":["UMLS:C3272797","MEDGEN:474430"],"termid":"MONDO:0100290","xrefs":{"Monarch":{"xref_id":"0100290"}}}


id: MONDO:0045059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"},{"relation_name":"is_a","term_name":"cribriform carcinoma","termid":"MONDO:0006176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cribriform carcinoma of breast","secondary_identifiers":["MEDGEN:1843502","DOID:5675","icd11.foundation:1025219649","UMLS:C2138440"],"synonyms":[{"name":"cribriform carcinoma","type":"broad"},{"name":"ductal carcinoma, cribriform type","type":"exact"}],"termid":"MONDO:0045059","xrefs":{"Monarch":{"xref_id":"0045059"}}}


id: PR:Q9USS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyrazinamidase/nicotinamidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03298","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.20c","secondary_identifiers":["UniProtKB:Q9USS0"],"synonyms":[{"name":"NAMase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pncA","type":"exact"},{"name":"nicotine deamidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USS0"}


id: PBO:0084437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malate synthase, enzyme of the glyoxylate cycle; involved in utilization of non-fermentable carbon sources; expression is subject to carbon catabolite repression; localizes in peroxisomes during growth on oleic acid, otherwise cytosolic; can accept butyryl-CoA as acyl-CoA donor in addition to traditional substrate acetyl-CoA","termid":"PBO:0084437"}


id: PBO:0084311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isomaltase (alpha-1,6-glucosidase/alpha-methylglucosidase); preferred specificity for isomaltose, alpha-methylglucoside, and palatinose, but also exhibits alpha-1,2 glucosidase activity on sucrose and kojibiose, and can cleave the 1,3-alpha linkage of nigerose and turanose and the alpha-1,5 linkage of leucrose in vitro; not required for isomaltose utilization, but Ima2p overexpression allows the ima1 null mutant to grow on isomaltose","termid":"PBO:0084311"}


id: GO:0097311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure lying external to bacterial cells. A biofilm is an aggregate of surface-associated bacteria, and the biofilm matrix is the envelope of polymeric substances that surrounds the bacteria.","definition_xrefs":["Wikipedia:Biofilm","GOC:imk","PMID:22571672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm matrix","termid":"GO:0062039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial biofilm matrix","termid":"GO:0097311"}


id: GO:0052617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADPH + ent-kaur-16-en-19-al + oxygen = H2O + NADP+ + ent-kaurenoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-kaur-16-en-19-al oxidase activity (obsolete GO:0052617)","termid":"GO:0052617"}


id: MONDO:0010636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kallmann syndrome with spastic paraplegia","secondary_identifiers":["MESH:C536873","MEDGEN:333437","OMIM:308750","UMLS:C1839911"],"synonyms":[{"name":"Kallmann syndrome with spastic paraplegia","type":"exact"},{"name":"spastic paraplegia-Kallmann syndrome","type":"related"}],"termid":"MONDO:0010636","xrefs":{"Monarch":{"xref_id":"0010636"}}}


id: GO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"recombination nodule","termid":"GO:0005713"}


id: PBO:0111743
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein","termid":"PBO:0111743"}


id: MONDO:0033853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cataract-severe neonatal hepatopathy-global developmental delay syndrome","secondary_identifiers":["Orphanet:521432","MEDGEN:1814478","UMLS:C5681444","GARD:22144"],"termid":"MONDO:0033853","xrefs":{"Monarch":{"xref_id":"0033853"}}}


id: PBO:0083890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) cytoplasmic filaments; contributes directly to nucleocytoplasmic transport and maintenance of the NPC permeability barrier and is involved in gene tethering at the nuclear periphery; interacts with Gle1p; human homolog NUP42 can complement yeast mutant","termid":"PBO:0083890"}


id: MONDO:0020044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive metabolic cerebellar ataxia","secondary_identifiers":["GARD:19413","MEDGEN:1842756","Orphanet:98096","UMLS:C5681517"],"termid":"MONDO:0020044","xrefs":{"Monarch":{"xref_id":"0020044"}}}


id: PBO:0084326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin responsible for the nuclear import of Rpf1p; Rpf1p is a ribosome maturation factor","termid":"PBO:0084326"}


id: MONDO:0027048
data:
  {"annotated_genes":["SJAG_01926"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85999],"is_not":false,"summary":null,"term":"MONDO:0027048"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nonsyndromic deafness, Y-linked","termid":"MONDO:0033304"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"deafness, Y-linked 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1677048","UMLS:C5193013","OMIM:400047","DOID:0111758"],"synonyms":[{"name":"DFNY2","type":"exact"},{"name":"deafness, y-linked 2, y-linked","type":"narrow"}],"termid":"MONDO:0027048","terms_by_termid":{"MONDO:0027048":null},"xrefs":{"Monarch":{"xref_id":"0027048"}}}


id: PBO:0083326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORFs PTC2/YER089C and YER088W-B","termid":"PBO:0083326"}


id: GO:0045499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0005488","GO:0098772","GO:0005515"],"is_obsolete":false,"name":"chemorepellent activity","synonyms":[{"name":"chemorepellant activity","type":"exact"}],"termid":"GO:0045499"}


id: FYPO:0002612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is normal at subtelomeric regions. All histone H2A phosphorylation may be assayed, or phosphorylation of specific sites on histone H2A may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H2A phosphorylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H2A phosphorylation at subtelomere during vegetative growth","type":"exact"},{"name":"normal histone H2A phosphorylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002612"}


id: SO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence ACGCGT, bound by the transcription factor complex MBF (MCB-binding factor) and found in promoters of genes expressed during the G1/S transition of the cell cycle.","definition_xrefs":["PMID:16285853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCB","synonyms":[{"name":"MluI cell cycle box","type":"exact"}],"termid":"SO:0001855"}


id: MONDO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive pancreatic intraductal papillary mucinous neoplasm characterized by the presence of neoplastic epithelial cells that form a single layer and are well polarized. The neoplastic cells exhibit small and uniform nuclei, mild pleomorphism, and rare mitotic figures.","definition_xrefs":["NCIT:C41249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic intraductal papillary-mucinous neoplasm","termid":"MONDO:0004286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia","secondary_identifiers":["UMLS:C1518868","DOID:7851","SCTID:473418001","ICDO:8453/0","MEDGEN:274118"],"synonyms":[{"name":"pancreatic intraductal papillary mucinous neoplasm with Low grade dysplasia","type":"exact"},{"name":"pancreatic intraductal papillary-mucinous adenoma","type":"exact"},{"name":"pancreatic intraductal papillary-mucinous neoplasm with Low grade dysplasia","type":"exact"}],"termid":"MONDO:0004381","xrefs":{"Monarch":{"xref_id":"0004381"}}}


id: SO:1000073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect that changes the splice acceptor sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000073 sequence_variant_affecting_splice_acceptor (obsolete SO:1000073)","synonyms":[{"name":"mutation affecting splicing","type":"related"},{"name":"sequence variant affecting splice acceptor","type":"related"},{"name":"splice acceptor mutation","type":"exact"}],"termid":"SO:1000073"}


id: GO:0140987
data:
  {"annotated_genes":["SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102036],"is_not":false,"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ATP from one side of a membrane to the other according to the reaction: ATP(out) + phosphate(in) = ATP(in) + phosphate(out).","definition_xrefs":["PMID:15123600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transmembrane transporter activity","termid":"GO:0005347"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00612":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATP:phosphate antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:65840"],"synonyms":[{"name":"ATP:inorganic phosphate antiporter activity","type":"exact"},{"name":"inorganic phosphate:ATP antiporter activity","type":"exact"}],"termid":"GO:0140987","terms_by_termid":{"GO:0140987":null}}


id: SO:1001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon signal for a UAA stop codon redefinition.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_signal","termid":"SO:1001288"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAA_stop_codon_signal","synonyms":[{"name":"UAA stop codon signal","type":"exact"}],"termid":"SO:1001283"}


id: PR:Q9P7X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-like protein 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.08","secondary_identifiers":["UniProtKB:Q9P7X7"],"synonyms":[{"name":"Spom972h-ACTL6A","type":"exact"},{"name":"actin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"actin-like protein arp4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"altered polarity protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7X7"}


id: PBO:0109384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 15","termid":"PBO:0109384"}


id: PBO:0078477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 1-1","termid":"PBO:0078477"}


id: GO:0018197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-aspartic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}


id: GO:0000354
data:
  {"annotated_genes":["SJAG_04230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116957],"is_not":false,"summary":null,"term":"GO:0000354"}]},"cv_name":"biological_process","definition":"Assembly of a spliceosomal complex containing the intact pre-mRNA and all of the spliceosomal snRNPs. This occurs when the tri-snRNP associates with the pre-mRNA and associated snRNPs in an ATP-dependent manner.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"},{"relation_name":"part_of","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0065003","GO:0044085","GO:0016071"],"is_obsolete":false,"name":"cis assembly of pre-catalytic spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000360","GO:0000361"],"synonyms":[{"name":"cis assembly of U12-type pre-catalytic spliceosome","type":"narrow"},{"name":"cis assembly of U2-type pre-catalytic spliceosome","type":"narrow"},{"name":"formation of spliceosomal A2-1 complex","type":"narrow"},{"name":"formation of spliceosomal B1 complex","type":"narrow"},{"name":"spliceosomal A2-1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-1 complex formation","type":"narrow"},{"name":"spliceosomal B1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal B1 complex formation","type":"narrow"}],"termid":"GO:0000354","terms_by_termid":{"GO:0000354":null}}


id: GO:1990162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 4) + H2O = histone H3 L-lysine (position 4) + acetate. This reaction represents the removal of an acetyl group from lysine at position 4 of the histone H3 protein.","definition_xrefs":["GOC:al","PMID:23771057","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0019213","GO:0033558","GO:0003824","GO:0003674","GO:0016787","GO:0016810","GO:0140096"],"is_obsolete":false,"name":"histone H3K4 deacetylase activity, hydrolytic mechanism","synonyms":[{"name":"histone H3-K4 deacetylase activity","type":"exact"},{"name":"histone H3K14 deacetylase activity","type":"broad"},{"name":"histone deacetylase activity (H3-K4 specific)","type":"broad"}],"termid":"GO:1990162"}


id: PBO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-tRNA protein transferase (predicted)","termid":"PBO:0001323"}


id: PBO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Rsa3 (predicted)","termid":"PBO:0001544"}


id: GO:0060038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a cardiac muscle cell population by cell division.","definition_xrefs":["GOC:dph","GOC:rph","PMID:11161571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell proliferation","termid":"GO:0014855"},{"relation_name":"part_of","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell proliferation","synonyms":[{"name":"cardiac myocyte proliferation","type":"exact"},{"name":"cardiomyocyte proliferation","type":"related"},{"name":"heart muscle cell proliferation","type":"exact"}],"termid":"GO:0060038"}


id: PBO:0003166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2, PAF family homolog","termid":"PBO:0003166"}


id: MONDO:1011778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic active hepatitis, non-human animal","secondary_identifiers":["OMIA:001093"],"termid":"MONDO:1011778","xrefs":{"Monarch":{"xref_id":"1011778"}}}


id: PBO:0035803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-ammonia_ligase_activity_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0035803"}


id: MONDO:0018854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A life-threatening, rapidly progressive thrombotic disorder affecting mainly neonates and children that is characterized by purpuric skin lesions and disseminated intravascular coagulation. PF may progress rapidly to multi-organ failure caused by thrombotic occlusion of small and medium-sized blood vessels. There are two forms of PF that are classified according to triggering mechanisms: acute infectious (the most common form), and idiopathic PF.","definition_xrefs":["Orphanet:49566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purpura fulminans","termid":"MONDO:0000809"},{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired purpura fulminans","secondary_identifiers":["GARD:18838","MESH:D014884","MEDGEN:1377273","MESH:D055665","SCTID:725157006","MedDRA:10037556","UMLS:C4510896"],"synonyms":[{"name":"acquired PF","type":"exact"},{"name":"acquired purpura fulminans","type":"exact"}],"termid":"MONDO:0018854","xrefs":{"Monarch":{"xref_id":"0018854"}}}


id: GO:0039646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the normal execution of the host cell G0/G1 transition checkpoint. The host is defined as the larger of the organisms involved in a symbiotic interaction. Some viruses benefit from keeping cells in resting state (G0), while others favor entry through G1 and subsequent cell division to replicate more efficiently.","definition_xrefs":["VZ:880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell cycle G0/G1 transition checkpoint","secondary_identifiers":["VZ:881"],"synonyms":[{"name":"G0/G1 host cell cycle checkpoint dysregulation by virus","type":"narrow"},{"name":"modulation by virus of host G0/G1 transition checkpoint","type":"narrow"},{"name":"perturbation by virus of host G0/G1 transition checkpoint","type":"narrow"}],"termid":"GO:0039646"}


id: PBO:0068367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 150","termid":"PBO:0068367"}


id: MONDO:0030844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 47","secondary_identifiers":["DOID:0112175","UMLS:C5436818","OMIM:619102","MEDGEN:1721477"],"synonyms":[{"name":"SPGF47","type":"exact"},{"name":"spermatogenic failure 47","type":"exact"}],"termid":"MONDO:0030844","xrefs":{"Monarch":{"xref_id":"0030844"}}}


id: FYPO:0000452
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to chromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000452","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: PBO:0045458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DR1 associated protein 1","termid":"PBO:0045458"}


id: SO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Arrangement of the polypeptide with respect to the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"membrane_structure","secondary_identifiers":["BS:00128"],"synonyms":[{"name":"membrane structure","type":"exact"}],"termid":"SO:0001071"}


id: GO:0047028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 6-lactoyl-5,6,7,8-tetrahydropterin = NADPH + H+ + 6-pyruvoyltetrahydropterin.","definition_xrefs":["EC:1.1.1.220","MetaCyc:1.1.1.220-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin 2'-reductase activity","secondary_identifiers":["RHEA:11772"],"synonyms":[{"name":"6-lactoyl-5,6,7,8-tetrahydropterin:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"6-pyruvoyl tetrahydropterin (2'-oxo)reductase activity","type":"related"},{"name":"6-pyruvoyl-tetrahydropterin 2'-reductase activity","type":"related"},{"name":"6-pyruvoyltetrahydropterin reductase activity","type":"related"},{"name":"6PPH4(2'-oxo) reductase activity","type":"related"},{"name":"pyruvoyl-tetrahydropterin reductase activity","type":"related"}],"termid":"GO:0047028"}


id: GO:0097547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic vesicle composed of both tubulovesicular and clear core vesicles that transport synaptic vesicle-associated proteins. Proteins carried by synaptic vesicle protein transport vesicles (STVs) include synaptophysin, synapsin Ia, synaptotagmin and synaptobrevin/vesicle-associated membrane protein 2 (VAMP2). STVs are packaged via the trans-Golgi network before being transported through the axon.","definition_xrefs":["GOC:dr","PMID:21569270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle protein transport vesicle","synonyms":[{"name":"STV","type":"exact"}],"termid":"GO:0097547"}


id: GO:0150178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["PMID:30074985","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"}


id: GO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete shmoo orientation (obsolete GO:0000284)","synonyms":[{"name":"shmoo orientation","type":"exact"}],"termid":"GO:0000284"}


id: MONDO:0013494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete PSMNSW (obsolete MONDO:0013494)","termid":"MONDO:0013494","xrefs":{"Monarch":{"xref_id":"0013494"}}}


id: PBO:0046246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL2 antisense RNA 1","termid":"PBO:0046246"}


id: GO:0048934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"}


id: PBO:0041219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 specific chaperone 1","termid":"PBO:0041219"}


id: GO:0140597
data:
  {"annotated_genes":["SJAG_01178","SJAG_04561","SJAG_05302","SJAG_04257","SJAG_01496","SJAG_02361","SJAG_02571","SJAG_02698","SJAG_00259","SJAG_00925","SJAG_02906","SJAG_02035","SJAG_03366","SJAG_00914","SJAG_01940","SJAG_03798","SJAG_02439","SJAG_02198","SJAG_00277","SJAG_00913","SJAG_00942","SJAG_03905","SJAG_02437","SJAG_02416","SJAG_04038","SJAG_04180","SJAG_04670","SJAG_03867","SJAG_00170","SJAG_00569","SJAG_02314","SJAG_04272","SJAG_04758","SJAG_01005","SJAG_02065","SJAG_01405","SJAG_05300","SJAG_01240","SJAG_02348","SJAG_04547","SJAG_04692","SJAG_03128","SJAG_03633","SJAG_01122"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98207,103308,103973,117737],"is_not":false,"summary":null,"term":"GO:0140597"},{"annotations":[87197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[93811,95645,102742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[112220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[97341,107260,110419,110420,112739,112740,116041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[117091,102743,94645,91584,94025,107934,109375,94268,111942,106891,113681,114215,107929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"},{"annotations":[108818,112741,88038,93814,94514,89282,110324,117092,102089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140713"},{"annotations":[87161,110936,102691,87136,100102,111390,94029,109554,110144,112481,113262,113831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032977"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a protein between two different cellular components by moving along with the target protein.","definition_xrefs":["PMID:7628437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00277":null,"SJAG_00569":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_01005":null,"SJAG_01122":null,"SJAG_01178":null,"SJAG_01240":null,"SJAG_01405":null,"SJAG_01496":null,"SJAG_01940":null,"SJAG_02035":null,"SJAG_02065":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02361":null,"SJAG_02416":null,"SJAG_02437":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02698":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03366":null,"SJAG_03633":null,"SJAG_03798":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04180":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04547":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"protein carrier chaperone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein carrier activity","type":"exact"},{"name":"protein chaperone","type":"broad"}],"termid":"GO:0140597","terms_by_termid":{"GO:0000510":null,"GO:0000511":null,"GO:0032977":null,"GO:0140597":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: PBO:0044076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 3","termid":"PBO:0044076"}


id: GO:0061218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mesonephros development. Mesonephros development is the process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"negatively_regulates","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesonephros development","termid":"GO:0061218"}


id: GO:0033230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + L-cysteine(in) = ADP + H+ + L-cysteine(out) + phosphate.","definition_xrefs":["PMID:32144203","RHEA:29783","PMID:25837721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type amino acid transporter activity","termid":"GO:0015424"},{"relation_name":"is_a","term_name":"cysteine transmembrane transporter activity","termid":"GO:0033229"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type cysteine transporter activity","secondary_identifiers":["GO:0032519","MetaCyc:RXN0-3"],"synonyms":[{"name":"ATP-dependent cysteine transporter activity","type":"exact"},{"name":"ATPase-coupled cysteine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled cysteine transporter activity","type":"related"},{"name":"cysteine exporter","type":"related"},{"name":"cysteine-exporting ATPase activity","type":"related"},{"name":"cysteine-transporting ATPase activity","type":"exact"}],"termid":"GO:0033230"}


id: FYPO:0002669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-glutamate-N-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal peptide-glutamate-N-acetyltransferase activity","termid":"FYPO:0002669"}


id: PBO:0003366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGT1-like protein Git7","termid":"PBO:0003366"}


id: PBO:0076416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9","termid":"PBO:0076416"}


id: MONDO:0022606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the pharyngeal system development.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchial arch disease","synonyms":[{"name":"disease of pharyngeal system development","type":"exact"},{"name":"disorder of pharyngeal system development","type":"exact"},{"name":"pharyngeal system development disease","type":"exact"}],"termid":"MONDO:0022606","xrefs":{"Monarch":{"xref_id":"0022606"}}}


id: GO:1990813
data:
  {"annotated_genes":["SJAG_03989","SJAG_04259","SJAG_01601","SJAG_00600","SJAG_03926","SJAG_01805","SJAG_03681","SJAG_00229","SJAG_01082","SJAG_04126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92993,98321,100459,100980,103673,106980,112360,112913,113632,115035],"is_not":false,"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome centromeric region is maintained during homologous chromosome segregation at meiotic anaphase I after cohesin is cleaved by separase along the arm regions.","definition_xrefs":["PMID:25533956","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic centromeric cohesion protection in anaphase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"anaphase cohesion protection","type":"exact"},{"name":"protection of centromeric cohesion during meiotic anaphase I","type":"exact"}],"termid":"GO:1990813","terms_by_termid":{"GO:1990813":null}}


id: MONDO:1030001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile absence, susceptibility to","secondary_identifiers":["OMIMPS:607631"],"termid":"MONDO:1030001","xrefs":{"Monarch":{"xref_id":"1030001"}}}


id: MONDO:0005807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare immunodeficiency syndrome characterized by the decrease of the CD4-positive lymphocytes below 300 per cubic millimeter in the absence of identifiable immunodeficiency causes. Patients with this syndrome are at an increased risk of opportunistic infections.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell immunodeficiency","termid":"MONDO:0003780"},{"relation_name":"is_a","term_name":"lymphopenia","termid":"MONDO:0003783"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"idiopathic CD4-positive T-lymphocytopenia","secondary_identifiers":["MEDGEN:64647","NCIT:C84780","DOID:3109","MESH:D018344","UMLS:C0206744"],"termid":"MONDO:0005807","xrefs":{"Monarch":{"xref_id":"0005807"}}}


id: PBO:0067875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 177","termid":"PBO:0067875"}


id: PBO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase family member 3, pseudogene","termid":"PBO:0048222"}


id: PBO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAPADILINO syndrome","termid":"PBO:0002375"}


id: PBO:0084471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master regulator that regulates transcript levels of the FLP1 gene; acts in concert with Rep1p to regulate transcript levels of the FLP1 gene that promotes plasmid copy amplification and 2-micron plasmid-inheritance; also autoregulates levels of its own transcript; required for Rep1p stability; both Rep1p and Rep2p are sumoylated which is important for function","termid":"PBO:0084471"}


id: PBO:0077792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase","termid":"PBO:0077792"}


id: GO:0009328
data:
  {"annotated_genes":["SJAG_03626","SJAG_02206"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92823,96401],"is_not":false,"summary":null,"term":"GO:0009328"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the ligation of phenylalanine to tRNA(Phe), forming L-phenylalanyl-tRNA(Phe).","definition_xrefs":["PMID:20223217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02206":null,"SJAG_03626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phenylalanine-tRNA ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009328","terms_by_termid":{"GO:0009328":null}}


id: FYPO:0001451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to freezing.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to cold","termid":"FYPO:0001450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to freezing","synonyms":[{"name":"increased growth during cellular response to freezing","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to freezing","type":"exact"},{"name":"resistance to freezing during mitotic cell cycle","type":"related"},{"name":"resistance to freezing during vegetative growth","type":"exact"},{"name":"resistant to freeze-thawing","type":"related"},{"name":"resistant to freezing","type":"exact"}],"termid":"FYPO:0001451"}


id: GO:0045039
data:
  {"annotated_genes":["SJAG_01640","SJAG_00404","SJAG_03502","SJAG_04996","SJAG_02524","SJAG_03515","SJAG_02398","SJAG_01120","SJAG_01949","SJAG_04208","SJAG_00687"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87868,89599,91985,98621,102102,106453,106669,106726,106748,112329,115403],"is_not":false,"summary":null,"term":"GO:0045039"}]},"cv_name":"biological_process","definition":"The processes mediating the insertion of proteins into the mitochondrial inner membrane. Mitochondrial inner membrane proteins can get inserted from the cytosol, by crossing the outer membrane and being guided by an inner membrane translocase complex into their final destination in the inner membrane. Some proteins present in the intermembrane space can get inserted into the inner mitochondrial membrane. Finally, some proteins are inserted into the inner membrane from the matrix side of the membrane.","definition_xrefs":["GOC:vw","GOC:mcc","PMID:18672008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transport","termid":"GO:0006839"},{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01640":null,"SJAG_01949":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_04208":null,"SJAG_04996":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0007005","GO:0061024","GO:0006605"],"is_obsolete":false,"name":"protein insertion into mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial inner membrane protein import","type":"exact"},{"name":"protein import into mitochondrial inner membrane","type":"exact"},{"name":"protein transport into mitochondrial inner membrane","type":"exact"}],"termid":"GO:0045039","terms_by_termid":{"GO:0045039":null}}


id: PBO:0087272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase involved in salt tolerance, nutrient response; functions in regulation of Trk1p-Trk2p potassium transporter; overexpression affects the Fe-S and lipoamide containing proteins in the mitochondrion; required for lipoylation of Lat1p, Kgd2p and Gcv3p; partially redundant with Hal5p; has similarity to Npr1p; localizes to the cytoplasm and mitochondrion","termid":"PBO:0087272"}


id: PBO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein","termid":"PBO:0002566"}


id: PBO:0085432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; recognizes spermine, putrescine, and spermidine; localizes to the plasma membrane","termid":"PBO:0085432"}


id: GO:0004351
data:
  {"annotated_genes":["SJAG_00937"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78937],"is_not":false,"summary":null,"term":"GO:0004351"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2.","definition_xrefs":["EC:4.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate decarboxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-888572","Reactome:R-HSA-888577","MetaCyc:GLUTDECARBOX-RXN","RHEA:17785"],"synonyms":[{"name":"L-aspartate-alpha-decarboxylase activity","type":"related"},{"name":"L-glutamate 1-carboxy-lyase (4-aminobutanoate-forming)","type":"related"},{"name":"L-glutamate 1-carboxy-lyase activity","type":"related"},{"name":"L-glutamate alpha-decarboxylase activity","type":"related"},{"name":"L-glutamic acid decarboxylase activity","type":"related"},{"name":"L-glutamic decarboxylase activity","type":"related"},{"name":"aspartic alpha-decarboxylase","type":"broad"},{"name":"cysteic acid decarboxylase activity","type":"related"},{"name":"gamma-glutamate decarboxylase activity","type":"related"}],"termid":"GO:0004351","terms_by_termid":{"GO:0004351":null}}


id: GO:0044784
data:
  {"annotated_genes":["SJAG_01082","SJAG_03048","SJAG_01679","SJAG_03353","SJAG_03126","SJAG_02169","SJAG_04853","SJAG_04699","SJAG_02336","SJAG_00666","SJAG_01805","SJAG_01330","SJAG_04968","SJAG_00883","SJAG_04884","SJAG_04573","SJAG_02498","SJAG_01515","SJAG_03575","SJAG_04259","SJAG_05329","SJAG_03681","SJAG_04999","SJAG_01956","SJAG_04126","SJAG_02380","SJAG_01837","SJAG_02451","SJAG_01297","SJAG_03327","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103069,112911,111101,107405,113401,106393,115034,89932,98782],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[113631,105477],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[100981,105478,115802],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[99323,97891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[99324,101472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[89552,101021,112259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007091"},{"annotations":[98626,105479,112915,113634,109061,100982,114689,115805,89934],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[97892],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[105480,114690],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045841"},{"annotations":[93399],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112916],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[94353],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[115809],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[113402,93000,101564,96890,113903,99325,101291],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[100520],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[93400],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"},{"annotations":[110519],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030071"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid segregation","termid":"GO:0033045"},{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03575":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04853":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"metaphase/anaphase transition of cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044784","terms_by_termid":{"GO:0007091":null,"GO:0007094":null,"GO:0030071":null,"GO:0033316":null,"GO:0045841":null,"GO:0045842":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902426":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990949":null,"GO:1990950":null}}


id: PBO:0090483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Vps66","termid":"PBO:0090483"}


id: GO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a iC3b product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"},{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"complement component iC3b binding","termid":"GO:0001852"}


id: MONDO:0000209
data:
  {"annotated_genes":["SJAG_02096","SJAG_03106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014806"},{"annotations":[85034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014807"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"},{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02096":null,"SJAG_03106":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"prenatal-onset spinal muscular atrophy with congenital bone fractures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:486811","OMIMPS:616866","UMLS:C5567518","MEDGEN:1798941","GARD:17882"],"synonyms":[{"name":"SMABF","type":"exact"},{"name":"spinal muscular atrophy with congenital bone fractures","type":"exact"}],"termid":"MONDO:0000209","terms_by_termid":{"MONDO:0014806":null,"MONDO:0014807":null},"xrefs":{"Monarch":{"xref_id":"0000209"}}}


id: GO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxymethylceph-3-em-4-carboxylate + carbamoyl-phosphate = phosphate + a 3-carbamoyloxymethylcephem.","definition_xrefs":["EC:2.1.3.7","MetaCyc:2.1.3.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-hydroxymethylcephem carbamoyltransferase activity","secondary_identifiers":["GO:0045447"],"synonyms":[{"name":"3'-hydroxymethylcephem-O-carbamoyltransferase activity","type":"exact"},{"name":"carbamoyl-phosphate:3-hydroxymethylceph-3-em-4-carboxylate carbamoyltransferase activity","type":"related"}],"termid":"GO:0047155"}


id: RO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component","termid":"RO:0002180"}


id: FYPO:0005138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the repair of double-strand breaks formed as part of meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:15238514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"},{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic recombination double-strand break repair","synonyms":[{"name":"normal DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"normal double-strand break repair during meiotic recombination","type":"exact"},{"name":"normal double-strand break repair involved in reciprocal meiotic recombination","type":"exact"}],"termid":"FYPO:0005138"}


id: GO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an eye photoreceptor cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}


id: PBO:0114423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 5","termid":"PBO:0114423"}


id: GO:0051922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + cholesterol = adenosine 3',5'-bisphosphate + cholesterol sulfate + H+.","definition_xrefs":["PMID:12730293","RHEA:52368","PMID:12145317","PMID:11416019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol sulfotransferase activity","termid":"GO:0004027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholesterol sulfotransferase activity","termid":"GO:0051922"}


id: GO:0019017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome that is divided into two or more physically separate molecules of nucleic acid and packaged into a single virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete segmented viral genome (obsolete GO:0019017)","termid":"GO:0019017"}


id: PBO:0043974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine sulfinic acid decarboxylase","termid":"PBO:0043974"}


id: GO:0051316
data:
  {"annotated_genes":["SJAG_01805","SJAG_03989","SJAG_00678","SJAG_01224","SJAG_02731","SJAG_03217","SJAG_00794","SJAG_02814","SJAG_01371","SJAG_05266","SJAG_00418","SJAG_01775","SJAG_01837","SJAG_03683","SJAG_02346","SJAG_05319","SJAG_00918","SJAG_04076","SJAG_05220","SJAG_03437","SJAG_03327","SJAG_04508","SJAG_03220","SJAG_03926","SJAG_01211","SJAG_01278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115800],"is_not":false,"summary":null,"term":"GO:0051316"},{"annotations":[93025,87080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051456"},{"annotations":[115815],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"},{"annotations":[116051,88351,108036,104639,109046,94507,90189,99707,97099,93006,100521,113231,109463,112363,97828,94756,106664,108296,88955,115060,109504,101622,106982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04508":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0051317"],"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiotic chromosome segregation","type":"related"},{"name":"attachment of spindle microtubules to meiotic chromosome","type":"exact"}],"termid":"GO:0051316","terms_by_termid":{"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: GO:0120225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"nucleoside phosphate binding","termid":"GO:1901265"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"coenzyme A binding","synonyms":[{"name":"CoA binding","type":"exact"}],"termid":"GO:0120225"}


id: PBO:0041911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBLL1 pseudogene 1","termid":"PBO:0041911"}


id: GO:0016345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during female meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"female meiosis chromosome segregation","termid":"GO:0016321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"female meiotic chromosome movement towards spindle pole","synonyms":[{"name":"chromosome movement towards spindle pole during female meiosis","type":"exact"},{"name":"female meiotic chromosome movement","type":"broad"},{"name":"female meiotic chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0016345"}


id: PBO:0062093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 43 pseudogene","termid":"PBO:0062093"}


id: PBO:0079585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D1","termid":"PBO:0079585"}


id: PBO:0111313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II 3' end processing-associated factor","termid":"PBO:0111313"}


id: PBO:0089987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 1 Pre3","termid":"PBO:0089987"}


id: FYPO:0003854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to an oligomycin antibiotic. Cells stop growing (and may die) at a concentration of oligomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to oligomycin","synonyms":[{"name":"hypersensitive to oligomycin","type":"exact"},{"name":"sensitive to oligomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to oligomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0003854"}


id: FYPO:0001563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glutamate level","secondary_identifiers":["FYPO:0001615"],"synonyms":[{"name":"decreased cellular L-glutamate level","type":"exact"},{"name":"decreased cellular glutamate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular glutamate level during vegetative growth","type":"exact"},{"name":"decreased cellular glutamic acid level","type":"related"},{"name":"decreased glutamate accumulation","type":"related"},{"name":"reduced cellular glutamate level","type":"exact"}],"termid":"FYPO:0001563"}


id: FYPO:0005516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in regions of euchromatin. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:22990236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in euchromatin","termid":"FYPO:0000854"},{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleosome occupancy in euchromatin","synonyms":[{"name":"decreased nucleosome occupancy in euchromatin during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy in euchromatin during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy in euchromatin","type":"exact"}],"termid":"FYPO:0005516"}


id: GO:2001161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K79 methylation.","definition_xrefs":["PMID:12876294"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K79 methylation (obsolete GO:2001161)","synonyms":[{"name":"negative regulation of histone H3 K79 methylation","type":"exact"},{"name":"negative regulation of histone H3K79me","type":"exact"},{"name":"negative regulation of histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:2001161"}


id: MONDO:0001298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitral valve insufficiency that is present at birth.","definition_xrefs":["NCIT:C197881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"},{"relation_name":"is_a","term_name":"mitral valve insufficiency","termid":"MONDO:1030008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital mitral valve insufficiency","secondary_identifiers":["MEDGEN:510600","MESH:D008944","NANDO:2200303","ICD9:396.3","ICD9:746.6","SCTID:29928006","UMLS:C0158619"],"synonyms":[{"name":"congenital insufficiency of mitral valve","type":"exact"},{"name":"congenital mitral insufficiency","type":"exact"}],"termid":"MONDO:0001298","xrefs":{"Monarch":{"xref_id":"0001298"}}}


id: PBO:0058095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4311","termid":"PBO:0058095"}


id: PBO:0061512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 2","termid":"PBO:0061512"}


id: PBO:0091585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga9","termid":"PBO:0091585"}


id: PBO:0041067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRI3 binding protein pseudogene 1","termid":"PBO:0041067"}


id: PBO:0066744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 42","termid":"PBO:0066744"}


id: PBO:0085597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in calcineurin regulation during calcium signaling; has similarity to H. sapiens DSCR1 which is found in the Down Syndrome candidate region","termid":"PBO:0085597"}


id: PBO:0077974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 2-1","termid":"PBO:0077974"}


id: PBO:0090208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Msl1","termid":"PBO:0090208"}


id: PBO:0002561
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.96","termid":"PBO:0002561"}


id: GO:0034829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxydec-2,4-diene-1,10-dioate + H2O = (2Z)-2,4-dihydroxydec-2-enedioate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxydec-2,4-diene-1,10-dioate hydratase activity (obsolete GO:0034829)","termid":"GO:0034829"}


id: PBO:0057375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aq","termid":"PBO:0057375"}


id: PBO:0086621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086621"}


id: PBO:0011123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Syt22","termid":"PBO:0011123"}


id: GO:1905851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of backward locomotion.","definition_xrefs":["GO_REF:0000058","PMID:11717360","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"regulation of backward locomotion","termid":"GO:0043058"},{"relation_name":"negatively_regulates","term_name":"backward locomotion","termid":"GO:0043057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of backward locomotion","synonyms":[{"name":"down regulation of backward locomotion","type":"exact"},{"name":"down-regulation of backward locomotion","type":"exact"},{"name":"downregulation of backward locomotion","type":"exact"},{"name":"inhibition of backward locomotion","type":"narrow"}],"termid":"GO:1905851"}


id: PBO:0091174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BC10 family small membrane protein, unknown biological role, human BLCAP ortholog","termid":"PBO:0091174"}


id: GO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer membrane-bounded periplasmic space","secondary_identifiers":["Wikipedia:Periplasmic_space"],"synonyms":[{"name":"outer membrane bounded periplasmic space","type":"exact"},{"name":"outer membrane-enclosed periplasmic space","type":"exact"}],"termid":"GO:0030288"}


id: PBO:0044090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A10","termid":"PBO:0044090"}


id: GO:0003294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of heart tissue that contributes to the maturation of the connection between an atrium and a ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial ventricular junction remodeling","synonyms":[{"name":"atrial ventricular junction remodelling","type":"exact"},{"name":"atrio-ventricular junction remodeling","type":"related"},{"name":"atrioventricular junction remodeling","type":"exact"}],"termid":"GO:0003294"}


id: PBO:0091564
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 is incorporated as a placeholder in new nucleosomes at centromeres during mitotic S phase, and is replaced by Cnp1 (CENP-A) in G2 phase","termid":"PBO:0091564"}


id: MONDO:0003716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary transitional cell carcinoma that arises from the renal pelvis.","definition_xrefs":["NCIT:C6148","NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal pelvis papillary tumor","termid":"MONDO:0003717"},{"relation_name":"is_a","term_name":"renal pelvis urothelial carcinoma","termid":"MONDO:0005221"},{"relation_name":"is_a","term_name":"papillary transitional cell carcinoma","termid":"MONDO:0006350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"renal pelvis papillary urothelial carcinoma","secondary_identifiers":["MEDGEN:237178","UMLS:C1377909","DOID:5973"],"synonyms":[{"name":"kidney pelvis papillary carcinoma","type":"exact"},{"name":"papillary carcinoma of kidney pelvis","type":"exact"},{"name":"papillary carcinoma of renal pelvis","type":"exact"},{"name":"papillary carcinoma of the kidney pelvis","type":"exact"},{"name":"papillary carcinoma of the renal pelvis","type":"exact"},{"name":"renal pelvis papillary carcinoma","type":"exact"},{"name":"renal pelvis papillary urothelial carcinoma","type":"exact"}],"termid":"MONDO:0003716","xrefs":{"Monarch":{"xref_id":"0003716"}}}


id: FYPO:0007036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing phenylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0002058","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on phenylglyoxal","synonyms":[{"name":"normal cell population growth in presence of phenylglyoxal","type":"exact"},{"name":"normal cell population growth on 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"normal cell population growth on phenylglyoxal","type":"exact"},{"name":"normal vegetative cell population growth on phenylglyoxal","type":"exact"}],"termid":"FYPO:0007036"}


id: GO:0140832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-histidine(out) + Na+(out) = H+(out) + L-histidine(in) + Na+(in).","definition_xrefs":["PMID:11742981","PMID:10619430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine transmembrane transporter activity","termid":"GO:0005290"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-histidine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71135"],"termid":"GO:0140832"}


id: PBO:0063791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20","termid":"PBO:0063791"}


id: PBO:0069118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 367, pseudogene","termid":"PBO:0069118"}


id: GO:0140097
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  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id: MONDO:1010801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly, non-human animal","termid":"MONDO:1010156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, dog","secondary_identifiers":["OMIA:000146-9615"],"termid":"MONDO:1010801","xrefs":{"Monarch":{"xref_id":"1010801"}}}


id: PBO:0067085
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 121, pseudogene","termid":"PBO:0067085"}


id: GO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A large multisubunit protease found in the cytosol that recognizes, unfolds, and digests protein substrates that have been marked for degradation by the attachment of a ubiquitin group. Individual subcomplexes of the complete 26S proteasome are involved in these different tasks: the ATP-dependent 19S caps are believed to unfold substrates and feed them to the actual protease, the 20S proteasome.","definition_xrefs":["PMID:10410804"],"gene_count":0,"genotype_count":0,"name":"obsolete 26S proteasome (obsolete GO:0005837)","synonyms":[{"name":"26S proteasome","type":"exact"}],"termid":"GO:0005837"}


id: PBO:0054592
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1995","termid":"PBO:0054592"}


id: GO:1905120
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a haloperidol stimulus.","definition_xrefs":["GO_REF:0000071","GOC:dw","GOC:TermGenie","PMID:24751813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to haloperidol","termid":"GO:1905119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to haloperidol","termid":"GO:1905120"}


id: PBO:0070436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabphilin 3A","termid":"PBO:0070436"}


id: PBO:0033800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_intracellular_protein_transport","termid":"PBO:0033800"}


id: FYPO:0003592
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to the anaphase-promoting complex (APC) occurs to a greater extent than normal. The protein whose binding to the APC may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-protein interaction","termid":"FYPO:0001571"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased anaphase-promoting complex binding","termid":"FYPO:0003592"}


id: PBO:0053033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE antisense RNA 1","termid":"PBO:0053033"}


id: MONDO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial adenomatous polyposis (obsolete MONDO:0000199)","termid":"MONDO:0000199","xrefs":{"Monarch":{"xref_id":"0000199"}}}


id: GO:0046598
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the introduction of viral entry into the host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral entry into host cell","termid":"GO:0046596"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral entry into host cell","synonyms":[{"name":"positive regulation of viral penetration into host cell","type":"exact"}],"termid":"GO:0046598"}


id: PBO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF962 family protein","termid":"PBO:0002082"}


id: PBO:0090818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60","termid":"PBO:0090818"}


id: GO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by the proteasome complex contributing to antigen processing and presentation.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591","PMID:15224092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteasomal proteolysis associated with antigen processing and presentation","termid":"GO:0002497"}


id: MONDO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute bacterial disease caused by Neisseria meningitides that presents usually, but not always, with a rash (non blanching petechial or purpuric rash), progressively developing signs of meningitis (fever, vomiting, headache, photophobia, and neck stiffness) and later leading to confusion, delirium and drowsiness. Neck stiffness and photophobia are often absent in infants and young children who may manifest nonspecific signs such as irritability, inconsolable crying, poor feeding, and a bulging fontanel. Meningococcal meningitis may also present as part of early or late onset sepsis in neonates. The disease is potentially fatal. Surviving patients may develop neurological sequelae that include sensorineural hearing loss, seizures, spasticity, attention deficits and intellectual disability.","definition_xrefs":["Orphanet:33475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningococcal infection","termid":"MONDO:0005373"},{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningococcal meningitis","secondary_identifiers":["MESH:D008585","ICD10EXP:G01*","ICD10EXP:A39.0+","icd11.foundation:516585689","UMLS:C0025294","SCTID:192644005","ICD10CM:A39.0","ICD9:036.0","EFO:1001040","GARD:18809","MEDGEN:6299","NORD:1438","MedDRA:10027276","DOID:0080176","MedDRA:10027249"],"termid":"MONDO:0018059","xrefs":{"Monarch":{"xref_id":"0018059"}}}


id: FYPO:0006927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ratio of the nuclear volume to the total cell volume is lower than normal (the ration observed in wild type is approximately 0.076-0.089).","definition_xrefs":["PMID:31015410","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleus:cytoplasm ratio","synonyms":[{"name":"decreased nuclear:cytoplasmic ratio","type":"exact"},{"name":"decreased nuclear:cytoplasmic volume ratio","type":"exact"},{"name":"decreased nucleus:cell volume ratio","type":"exact"},{"name":"decreased nucleus:cytoplasm ratio during mitotic cell cycle","type":"related"},{"name":"decreased nucleus:cytoplasm ratio during vegetative growth","type":"exact"},{"name":"decreased nucleus:cytoplasm volume ratio","type":"exact"},{"name":"reduced nucleus:cytoplasm ratio","type":"exact"}],"termid":"FYPO:0006927"}


id: PBO:0004224
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.6.1.1","termid":"PBO:0004224"}


id: GO:1901202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix assembly.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix assembly","termid":"GO:1901201"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of extracellular matrix assembly","synonyms":[{"name":"down regulation of extracellular matrix assembly","type":"exact"},{"name":"down-regulation of extracellular matrix assembly","type":"exact"},{"name":"downregulation of extracellular matrix assembly","type":"exact"},{"name":"inhibition of extracellular matrix assembly","type":"narrow"}],"termid":"GO:1901202"}


id: MONDO:0021935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving the Aspergillus niger.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspergillosis","termid":"MONDO:0005657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspergillus niger infection","secondary_identifiers":["GARD:9716","MESH:C535390","UMLS:C0276657","MEDGEN:82916"],"synonyms":[{"name":"Aspergillus niger infection","type":"exact"},{"name":"Aspergillus niger infection, pulmonary","type":"related"},{"name":"infections, Aspergillus niger","type":"related"}],"termid":"MONDO:0021935","xrefs":{"Monarch":{"xref_id":"0021935"}}}


id: GO:1905274
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of modification of postsynaptic actin cytoskeleton.","definition_xrefs":["GO_REF:0000058","PMID:21068295","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of modification of postsynaptic structure","termid":"GO:0099159"},{"relation_name":"regulates","term_name":"modification of postsynaptic actin cytoskeleton","termid":"GO:0098885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of modification of postsynaptic actin cytoskeleton","synonyms":[{"name":"regulation of postsynaptic actin cytoskeleton remodelling","type":"exact"}],"termid":"GO:1905274"}


id: PBO:0071270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 4","termid":"PBO:0071270"}


id: PBO:0063960
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1","termid":"PBO:0063960"}


id: PR:O94529
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FACT complex subunit SSRP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03592","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit pob3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.05","secondary_identifiers":["UniProtKB:O94529"],"synonyms":[{"name":"Spom972h-SSRP1","type":"exact"},{"name":"facilitates chromatin transcription complex subunit pob3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94529"}


id: PBO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 68","termid":"PBO:0042011"}


id: GO:0052031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the ability of the host to mount a defense in response to its presence. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host defense response","secondary_identifiers":["GO:0052255"],"synonyms":[{"name":"mitigation by symbiont of host defense response","type":"exact"},{"name":"modulation by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host defense response","type":"exact"},{"name":"pathogenesis","type":"related"},{"name":"perturbation by symbiont of host defense response","type":"exact"}],"termid":"GO:0052031"}


id: PBO:0088299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4646 family conserved fungal protein","termid":"PBO:0088299"}


id: FYPO:0001886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which haploid cells undergo meiotic nuclear division and attempt to sporulate. Haploid meiosis often results in the formation of a structure that resembles an azygotic ascus. Spores produced from a haploid cell have poor viability and appear to contain only 1/2C DNA on average.","definition_xrefs":["DOI:10.1007/BF00332932","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"meiotic cell cycle entry and sporulation in haploid","secondary_identifiers":["FYPO:0001887"],"synonyms":[{"name":"haploid meiosis","type":"related"},{"name":"haploid sporulation","type":"related"},{"name":"meiosis in haploid","type":"related"},{"name":"meiotic nuclear division and sporulation in haploid","type":"narrow"},{"name":"sporulation in haploid","type":"related"},{"name":"untimely meiosis","type":"broad"}],"termid":"FYPO:0001886"}


id: GO:1901535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA demethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA demethylation (obsolete GO:1901535)","termid":"GO:1901535"}


id: PR:O59722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fab1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 3-phosphate 5-kinase fab1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.01","synonyms":[{"name":"PIPkin-III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fab1","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphatidylinositol 3-phosphate 5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type III PIP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59722"}


id: PBO:0033817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator Sak1","termid":"PBO:0033817"}


id: PATO:0000258
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000258 relative taste_acuity (obsolete PATO:0000258)","termid":"PATO:0000258"}


id: MONDO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical Mycobacteriosis, familial (obsolete MONDO:0000007)","termid":"MONDO:0000007","xrefs":{"Monarch":{"xref_id":"0000007"}}}


id: PBO:0026802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026802"}


id: PBO:0075458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 8","termid":"PBO:0075458"}


id: GO:0103060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol-3-rhamnoside + UDP-L-rhamnose = kaempferol-3-rhamnoside-7-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol 3-rhamnoside 7-O-rhamnosyltransferase activity (obsolete GO:0103060)","termid":"GO:0103060"}


id: PBO:0040090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase family member J","termid":"PBO:0040090"}


id: GO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that is activated by trans-1-aminocyclopentane-1,3-dicarboxylic acid (t-ACPD) and inhibits adenylate cyclase activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","termid":"GO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"group II metabotropic glutamate receptor activity","termid":"GO:0001641"}


id: SO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing when a sequence, usually an mRNA is capped by the addition of a modified guanine nucleotide at the 5' end.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_attribute","termid":"SO:0000237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capped","termid":"SO:0000146"}


id: PBO:0066385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REC114 meiotic recombination protein","termid":"PBO:0066385"}


id: PBO:0042537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 6","termid":"PBO:0042537"}


id: GO:2000281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-T3 phosphorylation.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-T3 phosphorylation (obsolete GO:2000281)","termid":"GO:2000281"}


id: PATO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000713 relative time value (obsolete PATO:0000713)","termid":"PATO:0000713"}


id: PBO:0054698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2107","termid":"PBO:0054698"}


id: MONDO:0017807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by the presence of a growing mature teratoma in a patient during or after chemotherapy for a non-seminomatous germ cell tumor, with normal serum markers for human chorionic gonadotropin and alpha fetoprotein. Complete surgical resection is the preferred treatment.","definition_xrefs":["NCIT:C118370"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extragonadal non-dysgerminomatous germ cell tumor","termid":"MONDO:0020539"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growing teratoma syndrome","secondary_identifiers":["GARD:21380","Orphanet:314613","MEDGEN:856083","UMLS:C3891714"],"synonyms":[{"name":"GTS","type":"exact"}],"termid":"MONDO:0017807","xrefs":{"Monarch":{"xref_id":"0017807"}}}


id: FYPO:0000872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"decreased histone methylation during vegetative growth","termid":"FYPO:0000870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9me during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000872"}


id: PBO:0048690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 like 2","termid":"PBO:0048690"}


id: MONDO:0019228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of histidine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of histidine metabolism","secondary_identifiers":["ICD10CM:E70.40","ICD9:270.5","Orphanet:79181","UMLS:C0268512","icd11.foundation:543162269","MEDGEN:541342","SCTID:44176004","DOID:9265","GARD:18959"],"synonyms":[{"name":"disorder of histidine metabolic process","type":"exact"},{"name":"disorder of histidine metabolism","type":"exact"},{"name":"disturbance of histidine metabolism","type":"exact"},{"name":"histidine metabolic process disease","type":"exact"},{"name":"histidine metabolism disease","type":"exact"},{"name":"inborn disorder of histidine metabolism","type":"exact"},{"name":"inborn error of histidine metabolic process","type":"exact"},{"name":"inborn error of histidine metabolism","type":"exact"},{"name":"inborn histidine metabolic process disorder","type":"exact"},{"name":"rare inborn error of histidine metabolic process","type":"exact"}],"termid":"MONDO:0019228","xrefs":{"Monarch":{"xref_id":"0019228"}}}


id: MONDO:0019362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gram-negative bacterial infection caused by Rickettsia prowazekii. It is spread by lice infected with the bacteria. Signs and symptoms include sudden headache, generalized muscle pain, malaise, and macular skin lesions. The infection may affect the central nervous system causing encephalitis.","definition_xrefs":["NCIT:C84689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"typhus","termid":"MONDO:0001246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidemic louse-borne typhus","secondary_identifiers":["DOID:0050480","GARD:19032","MedDRA:10014979","Orphanet:83314","UMLS:C0041473","MEDGEN:21744","icd11.foundation:295798687"],"synonyms":[{"name":"epidemic louse-borne typhus","type":"exact"},{"name":"epidemic typhus","type":"exact"},{"name":"epidemic typhus fever","type":"exact"},{"name":"sylvatic typhus","type":"exact"},{"name":"typhus","type":"broad"}],"termid":"MONDO:0019362","xrefs":{"Monarch":{"xref_id":"0019362"}}}


id: GO:0002708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"positively_regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte mediated immunity","synonyms":[{"name":"activation of lymphocyte mediated immunity","type":"narrow"},{"name":"stimulation of lymphocyte mediated immunity","type":"narrow"},{"name":"up regulation of lymphocyte mediated immunity","type":"exact"},{"name":"up-regulation of lymphocyte mediated immunity","type":"exact"},{"name":"upregulation of lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002708"}


id: PBO:0084913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic exit network regulator; forms GTPase-activating Bfa1p-Bub2p complex that binds Tem1p and spindle pole bodies, blocks cell cycle progression before anaphase in response to spindle and kinetochore damage","termid":"PBO:0084913"}


id: PBO:0087016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; RNR2 has a paralog, RNR4, that arose from the whole genome duplication","termid":"PBO:0087016"}


id: PBO:0046519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor responsive lncRNA 1","termid":"PBO:0046519"}


id: GO:0000460
data:
  {"annotated_genes":["SJAG_03425","SJAG_02553","SJAG_02547","SJAG_00689","SJAG_02644","SJAG_02993","SJAG_04321","SJAG_04153","SJAG_01581","SJAG_00854","SJAG_01551","SJAG_02374","SJAG_06613","SJAG_03179","SJAG_04369","SJAG_01623","SJAG_00882","SJAG_04006","SJAG_03234","SJAG_02275","SJAG_03012","SJAG_00965","SJAG_01431","SJAG_01521","SJAG_02250","SJAG_04916","SJAG_00897","SJAG_04330","SJAG_03796","SJAG_01191","SJAG_04289","SJAG_03745","SJAG_01818","SJAG_04492","SJAG_02830","SJAG_00722","SJAG_01811","SJAG_04084","SJAG_00955","SJAG_04824","SJAG_04174","SJAG_03952","SJAG_04818","SJAG_00772","SJAG_04582","SJAG_03789","SJAG_04524","SJAG_00081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92006,92099,100222,115296,118023],"is_not":false,"summary":null,"term":"GO:0000460"},{"annotations":[117682,90895,94153,103290],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[112620,99009,104820,114529,93907,102301,107106,103725,104819,114441,104723,98685,103941,92610,95984,95692,108154,106778,117716],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[91443,98136,96439,117422,103575,95109,101261,115016,92271,105623,104420,107642,89183,114575,106611],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000467"},{"annotations":[106612],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000465"},{"annotations":[97172,105161,109952,113977,88834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000466"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00772":null,"SJAG_00854":null,"SJAG_00882":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01191":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_01811":null,"SJAG_01818":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02830":null,"SJAG_02993":null,"SJAG_03012":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04289":null,"SJAG_04321":null,"SJAG_04330":null,"SJAG_04369":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"maturation of 5.8S rRNA","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000460","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000460":null,"GO:0000465":null,"GO:0000466":null,"GO:0000467":null}}


id: PBO:0063682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 6","termid":"PBO:0063682"}


id: PBO:0034719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1-CUL4-associated factor (DCAF), Wdr70","termid":"PBO:0034719"}


id: FYPO:0001062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamine import","termid":"FYPO:0001061"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased glutamine import","synonyms":[{"name":"decreased L-glutamine import","type":"narrow"},{"name":"decreased glutamine import across plasma membrane","type":"exact"},{"name":"decreased glutamine import during mitotic cell cycle","type":"related"},{"name":"decreased glutamine import during vegetative growth","type":"exact"},{"name":"decreased glutamine import into cell","type":"exact"},{"name":"decreased glutamine uptake","type":"exact"},{"name":"reduced glutamine import","type":"exact"}],"termid":"FYPO:0001062"}


id: MOD:01326
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 9x(13)C labeled L-tyrosine.","definition_xrefs":["PubMed:12716131","PubMed:11510821","Unimod:184#Y","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9x(13)C labeled residue","termid":"MOD:00540"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9x(13)C labeled L-tyrosine","synonyms":[{"name":"13C(9) Silac label","type":"related"},{"name":"Label:13C(9)","type":"related"}],"termid":"MOD:01326"}


id: PBO:0068893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 135, pseudogene","termid":"PBO:0068893"}


id: PBO:0004205
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.11.1.9","termid":"PBO:0004205"}


id: MONDO:0020467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"monosomy X","termid":"MONDO:0020466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"mosaic monosomy X","secondary_identifiers":["SCTID:710010005","GARD:19677","MEDGEN:873772","Orphanet:99228","UMLS:C4040907"],"synonyms":[{"name":"Mosaic Turner syndrome","type":"exact"},{"name":"Mosaic monosomy type X","type":"exact"},{"name":"XX/XO","type":"exact"}],"termid":"MONDO:0020467","xrefs":{"Monarch":{"xref_id":"0020467"}}}


id: MONDO:0032760
data:
  {"annotated_genes":["SJAG_05282","SJAG_04613"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86367,86368],"is_not":false,"summary":null,"term":"MONDO:0032760"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04613":null,"SJAG_05282":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with or without dysmorphic facies and autism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1679263","UMLS:C5193106","OMIM:618454"],"synonyms":[{"name":"DEDDFA","type":"related"},{"name":"DEVELOPMENTAL DELAY WITH OR WITHOUT DYSMORPHIC FACIES AND AUTISM","type":"related"}],"termid":"MONDO:0032760","terms_by_termid":{"MONDO:0032760":null},"xrefs":{"Monarch":{"xref_id":"0032760"}}}


id: PBO:0062978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 like, cytoplasmic","termid":"PBO:0062978"}


id: MONDO:0024263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aspiration of meconium, blood, amniotic fluid or gastric contents around the time of delivery resulting in clinical symptoms from airway obstruction, parenchymal injury, and ventilation-perfusion mismatch. This may lead to persistent pulmonary hypertension in the newborn.","definition_xrefs":["NCIT:C118312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal aspiration syndrome","secondary_identifiers":["MEDGEN:578767","UMLS:C0349468","SCTID:276533002"],"termid":"MONDO:0024263","xrefs":{"Monarch":{"xref_id":"0024263"}}}


id: PBO:0011462
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.958","termid":"PBO:0011462"}


id: PBO:0086891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in export of ammonia; ammonia is a starvation signal that promotes cell death in aging colonies; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family; homolog of Y. lipolytica Gpr1p; ATO2 has a paralog, ADY2, that arose from the whole genome duplication","termid":"PBO:0086891"}


id: PBO:0049176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor receptor bound protein 14","termid":"PBO:0049176"}


id: PBO:0002488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transporter (predicted)","termid":"PBO:0002488"}


id: GO:0141204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dipeptide from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["PMID:38507452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"dipeptide transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"dipeptide export from lysosomal lumen","type":"exact"},{"name":"dipeptide export from lysosome","type":"exact"},{"name":"transmembrane dipeptide transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:0141204"}


id: MONDO:1011472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in golden hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, golden hamster","secondary_identifiers":["OMIA:000037-10036"],"termid":"MONDO:1011472","xrefs":{"Monarch":{"xref_id":"1011472"}}}


id: MONDO:0018339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prion protein (PrP) systemic amyloidosis, previously known as chronic diarrhea with hereditary sensory and autonomic neuropathy is an extremely rare autosomal dominant disorder reported in three British families, a Japanese and an Italian family (about 16 cases in total). Onset is usually in the fourth decade of life and the course lasts about 20 years. Reported clinical manifestations include diarrhea, nausea, autonomic failure (areflexia, weakness), neurogenic bladder and urinary infections. The disorder is caused by truncation mutations of the prion protein gene PRNP (20p13) leading to deposition of prion protein amyloid.","definition_xrefs":["Orphanet:397606"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PrP systemic amyloidosis","secondary_identifiers":["MEDGEN:1377371","SCTID:733422008","UMLS:C4518776","GARD:21632"],"synonyms":[{"name":"chronic diarrhea with HSAN","type":"exact"},{"name":"chronic diarrhea with hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"chronic diarrhoea with HSAN","type":"exact"},{"name":"chronic diarrhoea with hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"prion protein systemic amyloidosis","type":"exact"}],"termid":"MONDO:0018339","xrefs":{"Monarch":{"xref_id":"0018339"}}}


id: GO:0097275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of ammonium within a cell.","definition_xrefs":["PMID:12695560","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"ammonium homeostasis","termid":"GO:0097272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular ammonium homeostasis","synonyms":[{"name":"cellular ammonia homeostasis","type":"exact"},{"name":"cellular ammonium homeostasis","type":"exact"}],"termid":"GO:0097275"}


id: GO:1905890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to very-low-density lipoprotein particle stimulus.","definition_xrefs":["PMID:7592957","GOC:aruk","GOC:TermGenie","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:0090731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to very-low-density lipoprotein particle stimulus","synonyms":[{"name":"regulation of cellular response to VLDL particle stimulus","type":"exact"}],"termid":"GO:1905890"}


id: PBO:0111939
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZNF_U1","termid":"PBO:0111939"}


id: PBO:0091439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane copper transmembrane transporter Mfc1","termid":"PBO:0091439"}


id: MONDO:0700236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS9 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS9-related ciliopathy","synonyms":[{"name":"BBS9-related ciliopathy","type":"exact"}],"termid":"MONDO:0700236","xrefs":{"Monarch":{"xref_id":"0700236"}}}


id: MONDO:0023040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia Bartalos type","secondary_identifiers":["GARD:2043"],"termid":"MONDO:0023040","xrefs":{"Monarch":{"xref_id":"0023040"}}}


id: GO:0033392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an identical actin monomer to form a homodimer.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete actin homodimerization activity (obsolete GO:0033392)","synonyms":[{"name":"actin dimerization activity","type":"broad"},{"name":"actin homodimerization activity","type":"exact"},{"name":"actin polymerizing activity","type":"related"}],"termid":"GO:0033392"}


id: GO:0018764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-isopropylammelide + H2O = cyanuric acid + isopropylamine.","definition_xrefs":["EC:3.5.4.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"N-isopropylammelide isopropylaminohydrolase activity","secondary_identifiers":["MetaCyc:R123-RXN","UM-BBD_enzymeID:r0115","RHEA:23608"],"synonyms":[{"name":"AtzC","type":"related"}],"termid":"GO:0018764"}


id: PBO:0068303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 7 pseudogene 1","termid":"PBO:0068303"}


id: PBO:0069180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 434, pseudogene","termid":"PBO:0069180"}


id: PBO:0114080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific methyltransferase","termid":"PBO:0114080"}


id: PBO:0062316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 1","termid":"PBO:0062316"}


id: GO:1900379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asperthecin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"asperthecin biosynthetic process","termid":"GO:0036184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of asperthecin biosynthetic process","synonyms":[{"name":"regulation of asperthecin biosynthesis","type":"exact"},{"name":"regulation of asperthecin formation","type":"exact"},{"name":"regulation of asperthecin synthesis","type":"exact"}],"termid":"GO:1900379"}


id: FYPO:0005906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cgontractile ring contraction begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah","PMID:19570908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring contraction","termid":"FYPO:0004097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal onset of actomyosin contractile ring contraction","synonyms":[{"name":"normal dwell time before actomyosin contractile ring contraction","type":"exact"},{"name":"normal onset of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal onset of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal onset of contractile ring contraction","type":"exact"},{"name":"normal onset of cytokinetic contractile ring contraction","type":"exact"},{"name":"normal onset of cytokinetic ring contraction","type":"related"},{"name":"normal onset of mitotic contractile ring contraction","type":"exact"},{"name":"normal timing of actomyosin contractile ring contraction","type":"related"}],"termid":"FYPO:0005906"}


id: MONDO:0003771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the jugular foramen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jugular foramen meningioma","secondary_identifiers":["DOID:6110","MEDGEN:233586","UMLS:C1334298","NCIT:C5293"],"synonyms":[{"name":"jugular foramen meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of jugular foramen","type":"exact"},{"name":"meningioma of jugular Foramen","type":"exact"},{"name":"meningioma of the jugular Foramen","type":"exact"}],"termid":"MONDO:0003771","xrefs":{"Monarch":{"xref_id":"0003771"}}}


id: GO:0047378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycerol + H2O = 1-alkyl-sn-glycerol + acetate + H+.","definition_xrefs":["RHEA:11552","EC:3.1.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylalkylglycerol acetylhydrolase activity","secondary_identifiers":["MetaCyc:3.1.1.71-RXN","KEGG_REACTION:R04043"],"synonyms":[{"name":"2-acetyl-1-alkyl-sn-glycerol acetylhydrolase activity","type":"related"},{"name":"alkylacetylglycerol acetylhydrolase activity","type":"related"}],"termid":"GO:0047378"}


id: GO:1905474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in stem cell proliferation.","definition_xrefs":["PMID:25640183","GOC:bc","GOC:PARL","GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in stem cell proliferation (obsolete GO:1905474)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in stem cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in stem cell proliferation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in stem cell proliferation","type":"narrow"}],"termid":"GO:1905474"}


id: PBO:0030095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_rapamycin","termid":"PBO:0030095"}


id: GO:0052406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving carbohydrates within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont carbohydrate (obsolete GO:0052406)","termid":"GO:0052406"}


id: PBO:0052819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 85","termid":"PBO:0052819"}


id: GO:0035108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.","definition_xrefs":["UBERON:0002101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb morphogenesis","synonyms":[{"name":"limb bud morphogenesis","type":"narrow"}],"termid":"GO:0035108"}


id: GO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"RNA polymerase V is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol V is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase IVa, while the largest subunit is found only in the IVa complex and contains an extended C-terminal domain (CTD) that includes multiple repeats of a 16 amino-acid consensus sequence as well as other sequences. The remainder of the complex is composed of smaller subunits.","definition_xrefs":["GOC:mtg_sensu","PMID:19110459","PMID:16140984","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase V complex","secondary_identifiers":["GO:0080137"],"synonyms":[{"name":"DNA-directed RNA polymerase IVb complex","type":"exact"},{"name":"DNA-directed RNA polymerase V complex","type":"exact"}],"termid":"GO:0000419"}


id: FYPO:0000760
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118222,118225],"is_not":false,"summary":null,"term":"FYPO:0000760"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"mating phenotype","termid":"FYPO:0000301"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0000257"],"is_obsolete":false,"name":"normal mating","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01355","SJAG_00601"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"synonyms":[{"name":"normal conjugation","type":"exact"},{"name":"normal conjugation with cellular fusion","type":"exact"},{"name":"normal zygote formation","type":"related"}],"termid":"FYPO:0000760","terms_by_termid":{"FYECO:0000015":null,"FYPO:0000760":null}}


id: PBO:0046007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 2","termid":"PBO:0046007"}


id: PBO:0038670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 4","termid":"PBO:0038670"}


id: PR:Q09857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general vesicular transport factor p115 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01822","PRO:DNx","PANTHER:PTHR10013:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracellular protein transport protein uso1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.03c","secondary_identifiers":["UniProtKB:Q09857"],"synonyms":[{"name":"Spom972h-USO1","type":"exact"}],"termid":"PR:Q09857"}


id: GO:0070757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-35 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:add","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-35-mediated signaling pathway","synonyms":[{"name":"IL-35-mediated signaling pathway","type":"exact"},{"name":"interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070757"}


id: FYPO:0006905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression from G1 to S phase until the cell reaches a certain size.","definition_xrefs":["GO:0031568","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell size control checkpoint","termid":"FYPO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000298","FYPO:0000631","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic G1 cell size control checkpoint","synonyms":[{"name":"normal G1 cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006905"}


id: FYPO:0002430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions","synonyms":[{"name":"inviable following spore germination, multiple cell divisions","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions","type":"exact"}],"termid":"FYPO:0002430"}


id: GO:0050202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(4-hydroxyphenyl)-2-aminoethanol = (4-hydroxyphenyl)acetaldehyde + NH4.","definition_xrefs":["EC:4.2.1.87","RHEA:18173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"octopamine dehydratase activity","secondary_identifiers":["MetaCyc:OCTOPAMINE-DEHYDRATASE-RXN","KEGG_REACTION:R03358"],"synonyms":[{"name":"octopamine hydro-lyase (deaminating)","type":"related"},{"name":"octopamine hydro-lyase [deaminating; (4-hydroxyphenyl)acetaldehyde-forming]","type":"related"},{"name":"octopamine hydrolyase activity","type":"related"}],"termid":"GO:0050202"}


id: MONDO:0019516
data:
  {"annotated_genes":["SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[85678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"}]},"cv_name":"mondo","definition":"Familial exudative vitreoretinopathy (FEVR) is a rare hereditary vitreoretinal disorder characterized by abnormal or incomplete vascularization of the peripheral retina leading to variable clinical manifestations ranging from no effects to minor anomalies, or even retinal detachment with blindness.","definition_xrefs":["Orphanet:891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"exudative vitreoretinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:573220","ICD9:362.10","UMLS:C0339539","OMIMPS:133780","GARD:1613","SCTID:232063007","MESH:C580083","DOID:0050535"],"synonyms":[{"name":"Criswick-Schepens syndrome","type":"exact"},{"name":"FEVR","type":"exact"},{"name":"exudative vitreoretinopathy, familial","type":"related"},{"name":"familial exudative vitreoretinopathy","type":"exact"}],"termid":"MONDO:0019516","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null},"xrefs":{"Monarch":{"xref_id":"0019516"}}}


id: GO:0052560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont immune response (obsolete GO:0052560)","synonyms":[{"name":"induction by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052560"}


id: PBO:0048848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadotropin releasing hormone 1","termid":"PBO:0048848"}


id: GO:0140347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of N-retinylidene-N-retinylphosphatidylethanolamine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:10412977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"N-retinylidene-phosphatidylethanolamine flippase activity","synonyms":[{"name":"N-retinylidene-phosphatidylethanolamine flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"}],"termid":"GO:0140347"}


id: PBO:0039829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-fifty homeobox","termid":"PBO:0039829"}


id: PBO:0032769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2, Ubc11/UbcP4","termid":"PBO:0032769"}


id: GO:0033846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + fluoride = 5'-deoxy-5'-fluoroadenosine + L-methionine.","definition_xrefs":["EC:2.5.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"adenosyl-fluoride synthase activity","secondary_identifiers":["RHEA:16661","MetaCyc:2.5.1.63-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:fluoride adenosyltransferase activity","type":"related"},{"name":"fluorinase activity","type":"related"}],"termid":"GO:0033846"}


id: PBO:0071369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 28","termid":"PBO:0071369"}


id: GO:0090107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"high-density lipoprotein particle assembly","termid":"GO:0034380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of high-density lipoprotein particle assembly","termid":"GO:0090107"}


id: MONDO:0700159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor arising from odontogenic epithelium and occurs in a dog.","definition_xrefs":["NCIT:C134956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine acanthomatous epulis","termid":"MONDO:0700159","xrefs":{"Monarch":{"xref_id":"0700159"}}}


id: FYPO:0004363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell differs from normal (i.e. is higher or lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered level of stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"abnormal level of stress responsive gene mRNA during vegetative growth","type":"exact"},{"name":"altered level of cellular response to stress responsive gene mRNA","type":"exact"},{"name":"altered level of stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"altered level of stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"altered level of stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"altered mRNA level of stress responsive genes during vegetative growth","type":"exact"},{"name":"altered stress responsive gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0004363"}


id: PBO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.29","termid":"PBO:0000114"}


id: PBO:0048979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 2 like","termid":"PBO:0048979"}


id: PBO:0047638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 1","termid":"PBO:0047638"}


id: PBO:0046440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin 1","termid":"PBO:0046440"}


id: PBO:0069572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 844, pseudogene","termid":"PBO:0069572"}


id: PBO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rapamycin","termid":"PBO:0031353"}


id: PBO:0046370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 5 (inactive)","termid":"PBO:0046370"}


id: PBO:0046220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 13","termid":"PBO:0046220"}


id: PBO:0062709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily H member 1","termid":"PBO:0062709"}


id: GO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol hexakisphosphate + ATP = 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + ADP.","definition_xrefs":["RHEA:12793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"inositol hexakisphosphate 5-kinase activity","secondary_identifiers":["KEGG_REACTION:R09087","MetaCyc:2.7.1.152-RXN"],"synonyms":[{"name":"ATP:1D-myo-inositol-hexakisphosphate 5-phosphotransferase activity","type":"exact"}],"termid":"GO:0000832"}


id: PBO:0054823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2236","termid":"PBO:0054823"}


id: GO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 4 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:curators","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 4 development","termid":"GO:0021570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}


id: GO:2000749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of rDNA heterochromatin formation.","definition_xrefs":["PMID:10899127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of rDNA heterochromatin formation","termid":"GO:0061187"},{"relation_name":"positively_regulates","term_name":"rDNA heterochromatin formation","termid":"GO:0000183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0006325"],"is_obsolete":false,"name":"positive regulation of rDNA heterochromatin formation","synonyms":[{"name":"positive regulation of chromatin silencing at rDNA","type":"broad"},{"name":"positive regulation of chromatin silencing at ribosomal DNA","type":"broad"},{"name":"positive regulation of heterochromatic silencing at rDNA","type":"broad"},{"name":"positive regulation of rDNA chromatin silencing","type":"broad"},{"name":"positive regulation of rDNA heterochromatin assembly","type":"exact"},{"name":"positive regulation of ribosomal DNA heterochromatin assembly","type":"exact"}],"termid":"GO:2000749"}


id: PBO:0073248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 2","termid":"PBO:0073248"}


id: GO:0003056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of vascular smooth muscle contraction.","definition_xrefs":["GOC:rl","GOC:mtg_sensu","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle contraction","synonyms":[{"name":"regulation of vascular smooth muscle contraction","type":"exact"}],"termid":"GO:0003056"}


id: PBO:0018158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transmembrane transporter Gms1","termid":"PBO:0018158"}


id: GO:0032597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell receptor into a membrane raft.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor transport within lipid bilayer","termid":"GO:0032595"},{"relation_name":"is_a","term_name":"protein transport into membrane raft","termid":"GO:0032596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"B cell receptor transport into membrane raft","synonyms":[{"name":"B cell receptor translocation into membrane raft","type":"exact"},{"name":"B cell receptor transport into lipid raft","type":"exact"},{"name":"BCR translocation into membrane raft","type":"exact"},{"name":"BCR transport into membrane raft","type":"exact"}],"termid":"GO:0032597"}


id: PBO:0077876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 3","termid":"PBO:0077876"}


id: PR:O74773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA mismatch repair protein Msh2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein msh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.01c","secondary_identifiers":["UniProtKB:O74773"],"synonyms":[{"name":"Spom972h-MSH2","type":"exact"}],"termid":"PR:O74773"}


id: PBO:0048575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin binding protein 2","termid":"PBO:0048575"}


id: PBO:0039878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 35","termid":"PBO:0039878"}


id: MONDO:0010283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal Xq duplications refer to chromosomal disorders resulting from involvement of the long arm of the X chromosome (Xq). Clinical manifestations vary widely depending on the gender of the patient and on the gene content of the duplicated segment. The prevalence of Xq duplications remains unknown.","definition_xrefs":["Orphanet:1762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome X","termid":"MONDO:0017010"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Lubs type","secondary_identifiers":["GARD:9781","OMIM:300260","SCTID:702816000","ICD9:758.89","UMLS:C1846058","MEDGEN:337496","NANDO:2200984","NCIT:C126747","DOID:0060799","DECIPHER:45","MESH:C537723"],"synonyms":[{"name":"Lubs X-linked intellectual disability syndrome","type":"exact"},{"name":"Lubs X-linked intellectual disability syndrome (formerly)","type":"related"},{"name":"Lubs X-linked mental retardation syndrome","type":"exact"},{"name":"Lubs X-linked mental retardation syndrome (formerly)","type":"related"},{"name":"MECP2 Duplication syndrome","type":"related"},{"name":"MECP2 duplication syndrome","type":"exact"},{"name":"MRXSL","type":"exact"},{"name":"X-linked intellectual disability-hypotonia-recurrent infections syndrome","type":"exact"},{"name":"XLMR syndrome, Lubs type","type":"related"},{"name":"Xq28 (MECP2) duplication","type":"exact"},{"name":"distal duplication Xq","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Lubs type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, Lubs type (formerly)","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Lubs type","type":"exact"},{"name":"intellectual disability, X-linked, with recurrent respiratory infections","type":"exact"},{"name":"mental retardation, X-linked, Lubs type (formerly)","type":"related"},{"name":"mental retardation, X-linked, syndromic, Lubs type","type":"exact"},{"name":"mental retardation, X-linked, with recurrent respiratory infections","type":"exact"},{"name":"syndromic X-linked intellectual disability Lubs type","type":"exact"},{"name":"telomeric duplication Xq","type":"exact"},{"name":"trisomy Xq28","type":"related"}],"termid":"MONDO:0010283","xrefs":{"Monarch":{"xref_id":"0010283"}}}


id: GO:0048482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ovule are generated and organized. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"carpel morphogenesis","termid":"GO:0048445"},{"relation_name":"part_of","term_name":"plant ovule development","termid":"GO:0048481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant ovule morphogenesis","termid":"GO:0048482"}


id: GO:0106114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cohesin dsDNA (leading strand) loading.","definition_xrefs":["PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cohesin dsDNA (leading strand) loading (obsolete GO:0106114)","termid":"GO:0106114"}


id: PBO:0029883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_heterochromatin-encoded_proteins","termid":"PBO:0029883"}


id: PBO:0054681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2089","termid":"PBO:0054681"}


id: MONDO:0018726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to a complement cascade component deficiency (obsolete MONDO:0018726)","termid":"MONDO:0018726","xrefs":{"Monarch":{"xref_id":"0018726"}}}


id: GO:2000098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell-matrix adhesion.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000097"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell-matrix adhesion","termid":"GO:0061302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000098"}


id: PBO:0050306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 8","termid":"PBO:0050306"}


id: PBO:0053714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 923","termid":"PBO:0053714"}


id: FYPO:0004908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which L-aminoadipate-semialdehyde dehydrogenase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"L-aminoadipate-semialdehyde dehydrogenase activity abolished","type":"exact"},{"name":"abolished alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0004908"}


id: PBO:0064695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 31","termid":"PBO:0064695"}


id: FYPO:0004285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mitomycin C.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on mitomycin C","synonyms":[{"name":"normal cell population growth in presence of mitomycin C","type":"exact"},{"name":"normal cell population growth on mitomycin C","type":"exact"},{"name":"normal vegetative cell population growth on mitomycin C","type":"exact"}],"termid":"FYPO:0004285"}


id: GO:1905322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell migration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26846297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell migration","termid":"GO:1905320"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell migration","termid":"GO:1905319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal stem cell migration","synonyms":[{"name":"activation of mesenchymal stem cell migration","type":"narrow"},{"name":"up regulation of mesenchymal stem cell migration","type":"exact"},{"name":"up-regulation of mesenchymal stem cell migration","type":"exact"},{"name":"upregulation of mesenchymal stem cell migration","type":"exact"}],"termid":"GO:1905322"}


id: GO:0033181
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex found in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"plasma membrane proton-transporting V-type ATPase complex","synonyms":[{"name":"plasma membrane hydrogen ion-transporting ATPase","type":"exact"}],"termid":"GO:0033181"}


id: GO:0032042
data:
  {"annotated_genes":["SJAG_03906","SJAG_03780","SJAG_00198","SJAG_01807","SJAG_01262","SJAG_02528","SJAG_04752","SJAG_03724","SJAG_03068","SJAG_02658","SJAG_01948","SJAG_00153","SJAG_01648","SJAG_00611","SJAG_03957","SJAG_05280"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91760,93932,96320,110727],"is_not":false,"summary":null,"term":"GO:0032042"},{"annotations":[89586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032043"},{"annotations":[105101,102059,111652,87805,107705,102079,113033,95338,98502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043504"},{"annotations":[115492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006264"},{"annotations":[94943],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090297"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving mitochondrial DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"mitochondrial genome maintenance","termid":"GO:0000002"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00198":null,"SJAG_00611":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_01807":null,"SJAG_01948":null,"SJAG_02528":null,"SJAG_02658":null,"SJAG_03068":null,"SJAG_03724":null,"SJAG_03780":null,"SJAG_03906":null,"SJAG_03957":null,"SJAG_04752":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial DNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial DNA metabolism","type":"exact"},{"name":"mtDNA metabolic process","type":"exact"},{"name":"mtDNA metabolism","type":"exact"}],"termid":"GO:0032042","terms_by_termid":{"GO:0006264":null,"GO:0032042":null,"GO:0032043":null,"GO:0043504":null,"GO:0090297":null}}


id: GO:0070223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfur dioxygenase.","definition_xrefs":["MetaCyc:PWY-5285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfide oxidation, using sulfur dioxygenase","synonyms":[{"name":"sulphide oxidation, using sulfur dioxygenase","type":"exact"}],"termid":"GO:0070223"}


id: PBO:0048729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycolipid transfer protein pseudogene 1","termid":"PBO:0048729"}


id: GO:1905641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetaldehyde stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:27687866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"response to acetaldehyde","termid":"GO:1905640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acetaldehyde","termid":"GO:1905641"}


id: PBO:0071584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a like","termid":"PBO:0071584"}


id: GO:0017126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleolus organization","termid":"GO:0007000"},{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nucleologenesis","synonyms":[{"name":"nucleolus assembly","type":"narrow"},{"name":"nucleolus biogenesis","type":"exact"}],"termid":"GO:0017126"}


id: PBO:0046265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMC3 antisense RNA 1","termid":"PBO:0046265"}


id: MONDO:0030089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"permanent neonatal diabetes mellitus","termid":"MONDO:0100164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254","MONDO:0005015","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"diabetes mellitus, permanent neonatal 4","secondary_identifiers":["UMLS:C5394307","GARD:16390","OMIM:618858","MEDGEN:1711191"],"synonyms":[{"name":"DIABETES MELLITUS, PERMANENT NEONATAL 4","type":"exact"},{"name":"PNDM4","type":"exact"},{"name":"diabetes mellitus, permanent neonatal 4","type":"exact"}],"termid":"MONDO:0030089","xrefs":{"Monarch":{"xref_id":"0030089"}}}


id: PBO:0088851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family","termid":"PBO:0088851"}


id: PBO:0068871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 111, pseudogene","termid":"PBO:0068871"}


id: GO:0048188
data:
  {"annotated_genes":["SJAG_00896","SJAG_01325","SJAG_07011","SJAG_02170","SJAG_03431","SJAG_02329","SJAG_02768","SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89918,93381,102293,104788,108494,114837,115671,116672],"is_not":false,"summary":null,"term":"GO:0048188"}]},"cv_name":"cellular_component","definition":"A conserved protein complex that catalyzes methylation of histone H3. In Saccharomyces the complex contains Shg1p, Sdc1p, Swd1p, Swd2p, Swd3p, Spp1p, Bre2p, and the trithorax-related Set1p; in mammals it contains the catalytic subunit (SETD1A or SETD1B), WDR5, WDR82, RBBP5, ASH2L/ASH2, CXXC1/CFP1, HCFC1 and DPY30.","definition_xrefs":["PMID:12488447","PMID:18508253","PMID:18838538","PMID:11742990","PMID:11805083","PMID:11687631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_00896":null,"SJAG_01325":null,"SJAG_02170":null,"SJAG_02329":null,"SJAG_02768":null,"SJAG_03431":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"Set1C/COMPASS complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"COMPASS complex","type":"exact"},{"name":"Set1/COMPASS complex","type":"exact"},{"name":"Set1C","type":"exact"}],"termid":"GO:0048188","terms_by_termid":{"GO:0048188":null}}


id: PBO:0003164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc1","termid":"PBO:0003164"}


id: PBO:0003359
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates per1","termid":"PBO:0003359"}


id: PBO:0034069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-anabranch_of","termid":"PBO:0034069"}


id: GO:0031511
data:
  {"annotated_genes":["SJAG_00684","SJAG_04696","SJAG_01278","SJAG_04177","SJAG_02664","SJAG_04581","SJAG_00350","SJAG_03619","SJAG_01928","SJAG_04040","SJAG_04255"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88893,89243,93499,93893,97096,104706,105521,112247,112681,113266,113696],"is_not":false,"summary":null,"term":"GO:0031511"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of the inner kinetochore, which is involved in the loading of the centromeric histone h3 variant CENP-A onto centromeres and in centromere specific heterochromatin formation. The complex contains about 12 proteins, of which two are known as Mis6 and Sim4 in S. pombe and CENP-I and CENP-H in human.","definition_xrefs":["PMID:15897182","PMID:12719471","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"inner kinetochore","termid":"GO:0000939"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00350":null,"SJAG_00684":null,"SJAG_01278":null,"SJAG_01928":null,"SJAG_02664":null,"SJAG_03619":null,"SJAG_04040":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04581":null,"SJAG_04696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0000776","GO:0032991"],"is_obsolete":false,"name":"Mis6-Sim4 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mcm21","type":"related"},{"name":"Mis6 centromere subcomplex","type":"narrow"},{"name":"Mis6-Mal2-Sim4 centromere complex","type":"exact"},{"name":"Sim4 complex","type":"exact"}],"termid":"GO:0031511","terms_by_termid":{"GO:0031511":null}}


id: GO:1903585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone deubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:24526689","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deubiquitination (obsolete GO:1903585)","synonyms":[{"name":"down regulation of histone deubiquitination","type":"exact"},{"name":"down regulation of histone deubiquitinylation","type":"exact"},{"name":"down regulation of histone deubiquitylation","type":"exact"},{"name":"down-regulation of histone deubiquitination","type":"exact"},{"name":"down-regulation of histone deubiquitinylation","type":"exact"},{"name":"down-regulation of histone deubiquitylation","type":"exact"},{"name":"downregulation of histone deubiquitination","type":"exact"},{"name":"downregulation of histone deubiquitinylation","type":"exact"},{"name":"downregulation of histone deubiquitylation","type":"exact"},{"name":"inhibition of histone deubiquitination","type":"narrow"},{"name":"inhibition of histone deubiquitinylation","type":"narrow"},{"name":"inhibition of histone deubiquitylation","type":"narrow"},{"name":"negative regulation of histone deubiquitinylation","type":"exact"},{"name":"negative regulation of histone deubiquitylation","type":"exact"}],"termid":"GO:1903585"}


id: PBO:0085627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in export of proteins from the endoplasmic reticulum; ERV15 has a paralog, ERV14, that arose from the whole genome duplication","termid":"PBO:0085627"}


id: MONDO:0018431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal recessive hereditary sensory and autonomic neuropathy (obsolete MONDO:0015366)","termid":"MONDO:0015366"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"cold-induced sweating syndrome - hyperthermia spectrum","secondary_identifiers":["UMLS:C5681139","GARD:21708","Orphanet:401993","MEDGEN:1842440"],"termid":"MONDO:0018431","xrefs":{"Monarch":{"xref_id":"0018431"}}}


id: GO:0018953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cymene, 1-methyl-4-isopropylbenzene, one of the alkyl-substituted aromatic hydrocarbons found in volatile oils from over 100 plants.","definition_xrefs":["UM-BBD_pathwayID:pcy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"p-cymene metabolic process","synonyms":[{"name":"p-cymene metabolism","type":"exact"}],"termid":"GO:0018953"}


id: PBO:0076127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine/tyrosine interacting like 1","termid":"PBO:0076127"}


id: PBO:0040862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 1","termid":"PBO:0040862"}


id: GO:0072183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"},{"relation_name":"negatively_regulates","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072183"}


id: PATO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated orange","synonyms":[{"name":"bright orange","type":"related"}],"termid":"PATO:0001277"}


id: PBO:0108935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 14","termid":"PBO:0108935"}


id: PBO:0073381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET nuclear proto-oncogene","termid":"PBO:0073381"}


id: GO:0043185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor 3.","definition_xrefs":["GOC:st"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor binding","termid":"GO:0005172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor 3 binding","synonyms":[{"name":"VEGF receptor 3 binding","type":"exact"},{"name":"VEGFR 3 binding","type":"exact"},{"name":"fms-like-tyrosine kinase (Flt)-4 binding","type":"exact"}],"termid":"GO:0043185"}


id: MONDO:0014975
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86215,86216],"is_not":false,"summary":null,"term":"MONDO:0014975"}]},"cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the ATP13A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 78","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1799316","OMIM:617225","Orphanet:513436","UMLS:C5567893","GARD:17952","DOID:0112348"],"synonyms":[{"name":"ATP13A2 hereditary spastic paraplegia","type":"exact"},{"name":"SPG78","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in ATP13A2","type":"exact"},{"name":"spastic paraplegia 78, autosomal recessive","type":"exact"},{"name":"spastic paraplegia 78, autosomal recessive; SPG78","type":"exact"}],"termid":"MONDO:0014975","terms_by_termid":{"MONDO:0014975":null},"xrefs":{"Monarch":{"xref_id":"0014975"}}}


id: MONDO:0019476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell lymphoma","termid":"MONDO:0015758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005093"],"is_obsolete":false,"name":"primary cutaneous peripheral T-cell lymphoma not otherwise specified","secondary_identifiers":["ICD10CM:C84.4","MEDGEN:38240","MESH:D016411","Orphanet:86885","UMLS:C0079774","MedDRA:10034623","GARD:19078"],"synonyms":[{"name":"primary cutaneous unspecified peripheral T-cell lymphoma","type":"exact"}],"termid":"MONDO:0019476","xrefs":{"Monarch":{"xref_id":"0019476"}}}


id: MONDO:0005489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A learning disorder characterized by an impairment in processing written words. Reading difficulties can include distortions, omissions or substitutions of characters. Oral and silent reading difficulties can include faulty and slow comprehension.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading disorder","termid":"MONDO:0001697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia","secondary_identifiers":["icd11.foundation:1843588689","MESH:D004410","UMLS:C0476254","EFO:0005424","HP:0010522","MEDGEN:96906","DOID:4428","NCIT:C96410"],"synonyms":[{"name":"dyslexia","type":"exact"},{"name":"dyslexia (disease)","type":"exact"}],"termid":"MONDO:0005489","xrefs":{"Monarch":{"xref_id":"0005489"}}}


id: MONDO:0008573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibial torsion, bilateral medial","secondary_identifiers":["MEDGEN:348785","MESH:C566045","OMIM:188800","UMLS:C1861097"],"synonyms":[{"name":"tibial torsion, bilateral medial","type":"exact"}],"termid":"MONDO:0008573","xrefs":{"Monarch":{"xref_id":"0008573"}}}


id: PBO:0029249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_filaments_present_in_increased_numbers","termid":"PBO:0029249"}


id: PBO:0110355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 pseudogene 2","termid":"PBO:0110355"}


id: PBO:0030322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_palmitoyl-CoA_ligase_activity","termid":"PBO:0030322"}


id: MONDO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dystrophy with or without macular staphyloma","secondary_identifiers":["Orphanet:653709","MEDGEN:1381980","UMLS:C4479651","OMIM:617547"],"synonyms":[{"name":"RDMS","type":"related"},{"name":"retinal dystrophy with macular staphyloma","type":"exact"},{"name":"retinal dystrophy with or without macular staphyloma","type":"exact"}],"termid":"MONDO:0060507","xrefs":{"Monarch":{"xref_id":"0060507"}}}


id: PBO:0086952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of dynein, involved in intracellular transport; part of the dynein/dynactin pathway; targets dynein to microtubule tips, which is necessary for sliding of microtubules along bud cortex; serves at interface between dynein's ATPase site and its microtubule binding stalk, causing individual dynein motors to remain attached to microtubules for long periods; synthetic lethal with bni1; homolog of human LIS1, mutations in which cause the severe brain disorder lissencephaly","termid":"PBO:0086952"}


id: MONDO:0007775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypersecretion of adrenal androgens, familial","secondary_identifiers":["MEDGEN:326725","MESH:C536845","UMLS:C1840387","OMIM:145295"],"synonyms":[{"name":"familial hypersecretion of adrenal androgens","type":"related"},{"name":"hypersecretion of adrenal androgens, familial","type":"exact"}],"termid":"MONDO:0007775","xrefs":{"Monarch":{"xref_id":"0007775"}}}


id: PR:O94672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec2302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec23-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.04","synonyms":[{"name":"Spom972h-sec2302","type":"exact"}],"termid":"PR:O94672"}


id: MONDO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with rectal atresia (obsolete MONDO:0035790)","secondary_identifiers":["Orphanet:601018"],"termid":"MONDO:0035790","xrefs":{"Monarch":{"xref_id":"0035790"}}}


id: PBO:0040295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3","termid":"PBO:0040295"}


id: FYPO:0005389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rqh1 accumulates is greater than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:12023299","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rqh1 foci during cellular response to ionizing radiation","synonyms":[{"name":"increased number of Rqh1 foci during cellular response to IR","type":"exact"},{"name":"increased number of Rqh1 foci during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased number of Rqh1 foci during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005389"}


id: MONDO:0020647
data:
  {"annotated_genes":["SJAG_01302"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85592],"is_not":false,"summary":null,"term":"MONDO:0020647"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01302":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, facial dysmorphism, renal agenesis, and ambiguous genitalia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618142","MEDGEN:1648412","UMLS:C4748348"],"synonyms":[{"name":"MFRG","type":"exact"},{"name":"microcephaly, facial dysmorphism, renal agenesis, and ambiguous genitalia syndrome","type":"exact"}],"termid":"MONDO:0020647","terms_by_termid":{"MONDO:0020647":null},"xrefs":{"Monarch":{"xref_id":"0020647"}}}


id: FYPO:0005603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint","termid":"FYPO:0002341"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"delayed mitotic DNA damage checkpoint deactivation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"prolonged mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005603"}


id: PBO:0058713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6841","termid":"PBO:0058713"}


id: FYPO:0003404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glyoxalase III activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glyoxalase III activity","termid":"FYPO:0003403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0000002"],"is_obsolete":false,"name":"abolished glyoxalase III activity","synonyms":[{"name":"glyoxalase III activity abolished","type":"exact"}],"termid":"FYPO:0003404"}


id: FYPO:0003022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of nocodazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to nocodazole","synonyms":[{"name":"resistance to nocodazole during mitotic cell cycle","type":"related"},{"name":"resistance to nocodazole during vegetative growth","type":"exact"},{"name":"resistant to nocodazole","type":"exact"}],"termid":"FYPO:0003022"}


id: PBO:0001140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain","termid":"PBO:0001140"}


id: MONDO:0020989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The persistence of substantial fetal hemoglobin production into adulthood, usually associated with hemoglobinopathies due to mutations in the alpha and/or beta chain of hemoglobin.","definition_xrefs":["NCIT:C129072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary persistence of fetal hemoglobin","secondary_identifiers":["MEDGEN:5495","UMLS:C0019025","ICD9:282.7","SCTID:191201002"],"synonyms":[{"name":"Disease, Haemoglobin F","type":"related"},{"name":"Disease, Hemoglobin F","type":"related"},{"name":"HEMOGLOBIN F DIS","type":"related"},{"name":"HPFH - Hereditary persistence of fetal hemoglobin","type":"related"},{"name":"HPFH - Hereditary persistence of foetal haemoglobin","type":"related"},{"name":"Haemoglobin F Disease","type":"related"},{"name":"Hb F disease","type":"related"},{"name":"Hemoglobin F Disease","type":"related"},{"name":"Hereditary Persistence of Fetal Hemoglobin","type":"related"},{"name":"Hereditary Persistence of Foetal Haemoglobin","type":"related"},{"name":"Hereditary persistence of fetal hemoglobin","type":"related"},{"name":"Hereditary persistence of foetal haemoglobin","type":"related"},{"name":"hereditary persistence of fetal hemoglobin","type":"exact"}],"termid":"MONDO:0020989","xrefs":{"Monarch":{"xref_id":"0020989"}}}


id: GO:0019694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alkanesulfonates, the anion of alkanesulfonic acids, sulfonic acid derivatives containing an aliphatic hydrocarbon group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"alkanesulfonate metabolic process","secondary_identifiers":["MetaCyc:ALKANEMONOX-PWY"],"synonyms":[{"name":"alkanesulfonate metabolism","type":"exact"},{"name":"alkanesulphonate metabolic process","type":"exact"},{"name":"alkanesulphonate metabolism","type":"exact"}],"termid":"GO:0019694"}


id: MONDO:1011282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive rod-cone degeneration that occurs in dogs due to a mutation in the ABCA4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stargardt disease, ABCA4-related, dog","secondary_identifiers":["OMIA:002179-9615"],"synonyms":[{"name":"Stargardt disease 1, dog","type":"related"}],"termid":"MONDO:1011282","xrefs":{"Monarch":{"xref_id":"1011282"}}}


id: GO:0003939
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104212],"is_not":false,"summary":null,"term":"GO:0003939"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-iditol + NAD+ = L-sorbose + NADH + H+. Acts on a number of sugar alcohols, including (but not limited to) L-iditol, D-glucitol, D-xylitol, and D-galactitol.","definition_xrefs":["EC:1.1.1.14","PMID:13373783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-iditol 2-dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:L-IDITOL-2-DEHYDROGENASE-RXN","Reactome:R-HSA-5652195"],"synonyms":[{"name":"L-iditol (sorbitol) dehydrogenase activity","type":"related"},{"name":"L-iditol:NAD oxidoreductase activity","type":"related"},{"name":"L-iditol:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"NAD+-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-sorbitol dehydrogenase","type":"related"},{"name":"glucitol dehydrogenase activity","type":"related"},{"name":"polyol dehydrogenase activity","type":"broad"},{"name":"sorbitol dehydrogenase activity","type":"related"}],"termid":"GO:0003939","terms_by_termid":{"GO:0003939":null}}


id: FYPO:0000537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein secretion during vegetative growth","termid":"FYPO:0000536"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein secretion during vegetative growth","synonyms":[{"name":"abolished protein secretion during mitotic cell cycle","type":"related"},{"name":"absent protein secretion during vegetative growth","type":"exact"},{"name":"protein secretion abolished during vegetative growth","type":"exact"},{"name":"protein secretion: absent","type":"related"}],"termid":"FYPO:0000537"}


id: PBO:0073595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature homeobox 2","termid":"PBO:0073595"}


id: MONDO:0971171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal recessive 29","secondary_identifiers":["OMIM:620793"],"termid":"MONDO:0971171","xrefs":{"Monarch":{"xref_id":"0971171"}}}


id: GO:1901503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ether.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ether biosynthetic process","synonyms":[{"name":"ether anabolism","type":"exact"},{"name":"ether biosynthesis","type":"exact"},{"name":"ether formation","type":"exact"},{"name":"ether synthesis","type":"exact"}],"termid":"GO:1901503"}


id: GO:2000797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amniotic stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell differentiation","termid":"GO:2000739"},{"relation_name":"regulates","term_name":"amniotic stem cell differentiation","termid":"GO:0097086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amniotic stem cell differentiation","termid":"GO:2000797"}


id: GO:0034146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 5.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 5 signaling pathway","synonyms":[{"name":"TLR5 signaling pathway","type":"exact"},{"name":"toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034146"}


id: MONDO:0010797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pearson syndrome is characterized by refractory sideroblastic anemia, vacuolization of bone marrow precursors and exocrine pancreatic dysfunction.","definition_xrefs":["Orphanet:699"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"constitutional neutropenia","termid":"MONDO:0015134"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disorder with intestinal involvement (obsolete MONDO:0015188)","termid":"MONDO:0015188"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with hypoparathyroidism (obsolete MONDO:0015895)","termid":"MONDO:0015895"},{"relation_name":"excluded_subClassOf","term_name":"obsolete mitochondrial oxidative phosphorylation disorder due to a large-scale single deletion of mitochondrial DNA (obsolete MONDO:0016792)","termid":"MONDO:0016792"},{"relation_name":"excluded_subClassOf","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pearson syndrome","secondary_identifiers":["MEDGEN:87459","NCIT:C115326","UMLS:C0342784","SCTID:237985009","DOID:0060067","OMIM:557000","GARD:7343","icd11.foundation:452521132","ICD9:277.87","MedDRA:10062941"],"synonyms":[{"name":"Pearson marrow-pancreas syndrome","type":"exact"},{"name":"Pearson's marrow/pancreas syndrome","type":"related"},{"name":"Pearson's syndrome","type":"related"},{"name":"sideroblastic Anaemia with marrow cell vacuolization and exocrine pancreatic dysfunction","type":"related"},{"name":"sideroblastic Anemia with marrow cell vacuolization and exocrine pancreatic dysfunction","type":"related"},{"name":"sideroblastic anaemia with marrow cell vacuolization and exocrine pancreatic dysfunction (formerly)","type":"related"},{"name":"sideroblastic anemia with marrow cell vacuolization and exocrine pancreatic dysfunction (formerly)","type":"related"}],"termid":"MONDO:0010797","xrefs":{"Monarch":{"xref_id":"0010797"}}}


id: PBO:0056301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 pseudogene","termid":"PBO:0056301"}


id: MONDO:1011724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency disease, non-human animal","secondary_identifiers":["OMIA:000550"],"termid":"MONDO:1011724","xrefs":{"Monarch":{"xref_id":"1011724"}}}


id: PBO:0055088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2506","termid":"PBO:0055088"}


id: GO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell over time, from its formation to the mature structure. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"}


id: PBO:0027824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_mitotic_spindle","termid":"PBO:0027824"}


id: MONDO:0044680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short rib-polydactyly syndrome type 5 (obsolete MONDO:0044680)","termid":"MONDO:0044680","xrefs":{"Monarch":{"xref_id":"0044680"}}}


id: MONDO:0018001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverse Klippel-Trenaunay syndrome","secondary_identifiers":["MEDGEN:1830088","GARD:21488","Orphanet:329324","UMLS:C5679859"],"synonyms":[{"name":"cutaneous hemangioma with muscle or bone atrophy","type":"exact"},{"name":"inverse Klippel-Trénaunay syndrome","type":"related"}],"termid":"MONDO:0018001","xrefs":{"Monarch":{"xref_id":"0018001"}}}


id: PBO:0081234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 19","termid":"PBO:0081234"}


id: MONDO:0018983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tolosa-Hunt syndrome is an ophthalmoplegic syndrome, affecting all age groups, characterized by acute attacks (lasting a few days to a few weeks) of periorbital pain, ipsilateral ocular motor nerve palsies, ptosis, disordered eye movements and blurred vision usually caused by a non-specific inflammatory process in the cavernous sinus and superior orbital fissure. It has an unpredictable course with spontaneous remission occurring in some and recurrence of attacks in others.","definition_xrefs":["Orphanet:64686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular motility disease","termid":"MONDO:0001584"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nuclear oculomotor paralysis","termid":"MONDO:0015083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tolosa-Hunt syndrome","secondary_identifiers":["GARD:7777","DOID:1278","MedDRA:10051526","MEDGEN:21197","MESH:D020333","NORD:1774","NCIT:C85193","icd11.foundation:969826782","SCTID:95794005","UMLS:C0040381"],"synonyms":[{"name":"THS","type":"related"},{"name":"Tolosa Hunt Syndrome","type":"exact"},{"name":"Tolosa Hunt syndrome","type":"exact"},{"name":"Tolosa-Hunt syndrome","type":"exact"},{"name":"nonspecific inflammation of the cavernous sinus or superior orbital fissure","type":"related"},{"name":"painful ophthalmoplegia","type":"exact"}],"termid":"MONDO:0018983","xrefs":{"Monarch":{"xref_id":"0018983"}}}


id: MONDO:0002569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal distention of the stomach due to accumulation of gastric contents that may reach 10 to 15 liters. Gastric dilatation may be the result of gastric outlet obstruction; ileus; gastroparesis; or denervation.","definition_xrefs":["MESH:D013271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric dilatation","secondary_identifiers":["UMLS:C0038353","MEDGEN:11602","DOID:3229"],"synonyms":[{"name":"stomach dilatation","type":"exact"}],"termid":"MONDO:0002569","xrefs":{"Monarch":{"xref_id":"0002569"}}}


id: PBO:0071693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 25","termid":"PBO:0071693"}


id: GO:0015614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-xylose(out) = ADP + phosphate + D-xylose(in).","definition_xrefs":["RHEA:29899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-xylose transmembrane transporter activity","termid":"GO:0015148"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type D-xylose transporter activity","secondary_identifiers":["MetaCyc:ABC-33-RXN","EC:7.5.2.10"],"synonyms":[{"name":"ATPase-coupled D-xylose transmembrane transporter activity","type":"related"},{"name":"D-xylose porter activity","type":"broad"},{"name":"D-xylose-importing ATPase activity","type":"related"}],"termid":"GO:0015614"}


id: GO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone metabolic process","termid":"GO:0007556"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of juvenile hormone metabolic process","synonyms":[{"name":"down regulation of juvenile hormone metabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone metabolic process","type":"exact"},{"name":"downregulation of juvenile hormone metabolic process","type":"exact"},{"name":"inhibition of juvenile hormone metabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone metabolism","type":"exact"}],"termid":"GO:0045928"}


id: MONDO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic endophthalmitis (obsolete MONDO:0001102)","termid":"MONDO:0001102","xrefs":{"Monarch":{"xref_id":"0001102"}}}


id: MONDO:0018842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary effusion lymphoma (PEL) is a large B-cell lymphoma located in the body cavities, characterized by pleural, peritoneal, and pericardial fluid lymphomatous effusions and that is always associated with human herpes virus-8 (HHV-8).","definition_xrefs":["Orphanet:48686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human herpesvirus 8-related tumor","termid":"MONDO:0015157"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"primary effusion lymphoma","secondary_identifiers":["EFO:1000491","MESH:D054685","ICDO:9678/3","ICD9:202.80","icd11.foundation:697911710","MEDGEN:220953","NCIT:C6915","GARD:9247","ONCOTREE:PEL","SCTID:713516007","UMLS:C1292753","MedDRA:10065857"],"synonyms":[{"name":"AIDS-related lymphoma","type":"related"},{"name":"PEL","type":"exact"},{"name":"body cavity-based lymphoma","type":"exact"},{"name":"primary Effusion Lymphoma","type":"exact"}],"termid":"MONDO:0018842","xrefs":{"Monarch":{"xref_id":"0018842"}}}


id: MONDO:0018933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mazabraud syndrome is a rare primary bone dysplasia characterized by the association of fibrous dysplasia with intramuscular myxomas. Fibrous dysplasia (usually polyostotic, sometimes monostotic) occurs during the growth period and can be asymptomatic or can present with pain, skeletal deformities or fractures while intramuscular myxoma, associated with polyostotic fibrous dysplasia is usually multifocal, typically occurring in the vicinity of skeletal lesions, and presents in adulthood as a painless soft-tissue mass (most commonly in the thigh). Although it is a benign condition, local recurrences of myxomas after incomplete excision and malignant transformation of a fibrous dysplastic lesion into osteogenic sarcoma have been reported.","definition_xrefs":["Orphanet:57782"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mazabraud syndrome","secondary_identifiers":["UMLS:C3697137","icd11.foundation:1153435718","GARD:18853","ICD9:733.29","MEDGEN:784403","SCTID:699251001","ICD9:215.9"],"synonyms":[{"name":"Myxoma with fibrous dysplasia","type":"exact"}],"termid":"MONDO:0018933","xrefs":{"Monarch":{"xref_id":"0018933"}}}


id: GO:0006208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"},{"relation_name":"is_a","term_name":"nucleobase catabolic process","termid":"GO:0046113"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleobase catabolic process","synonyms":[{"name":"pyrimidine base breakdown","type":"exact"},{"name":"pyrimidine base catabolic process","type":"exact"},{"name":"pyrimidine base catabolism","type":"exact"},{"name":"pyrimidine base degradation","type":"exact"}],"termid":"GO:0006208"}


id: GO:0102462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + UDP-L-rhamnose = quercetin 3-O-rhamnosyl(1->2)glucoside-7-O-rhamnoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-sophoroside 7-O-rhamnosyltransferase activity (obsolete GO:0102462)","termid":"GO:0102462"}


id: PBO:0087015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR) small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; relocalizes from nucleus to cytoplasm upon DNA replication stress; RNR4 has a paralog, RNR2, that arose from the whole genome duplication","termid":"PBO:0087015"}


id: MONDO:0022978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic hernia upper limb defects","termid":"MONDO:0022978","xrefs":{"Monarch":{"xref_id":"0022978"}}}


id: MONDO:0021271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A villous adenoma that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"colon adenoma","termid":"MONDO:0000527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"villous adenoma of colon","secondary_identifiers":["UMLS:C0149862","MEDGEN:56207","NCIT:C3495","SCTID:309084001"],"synonyms":[{"name":"colon villous adenoma","type":"exact"},{"name":"colonic villous adenoma","type":"exact"},{"name":"villous adenoma of the colon","type":"exact"}],"termid":"MONDO:0021271","xrefs":{"Monarch":{"xref_id":"0021271"}}}


id: PBO:0059382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 7","termid":"PBO:0059382"}


id: PBO:0089789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk16","termid":"PBO:0089789"}


id: MONDO:0800279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 6","secondary_identifiers":["MEDGEN:394369","UMLS:C2677793"],"synonyms":[{"name":"EIG6","type":"exact"}],"termid":"MONDO:0800279","xrefs":{"Monarch":{"xref_id":"0800279"}}}


id: PBO:0056658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 25","termid":"PBO:0056658"}


id: PBO:0079795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A3","termid":"PBO:0079795"}


id: SO:0000984
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a nucleotide polymer has only one strand.","direct_ancestors":[{"relation_name":"is_a","term_name":"strand_attribute","termid":"SO:0000983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single","termid":"SO:0000984"}


id: PBO:0043941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod homeobox","termid":"PBO:0043941"}


id: MONDO:0006168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete common hematopoietic neoplasm (obsolete MONDO:0006168)","termid":"MONDO:0006168","xrefs":{"Monarch":{"xref_id":"0006168"}}}


id: PBO:0090758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 2","termid":"PBO:0090758"}


id: PBO:0074990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-1","termid":"PBO:0074990"}


id: PBO:0044875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 4C","termid":"PBO:0044875"}


id: PBO:0076693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 9","termid":"PBO:0076693"}


id: PBO:0041548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 32","termid":"PBO:0041548"}


id: GO:0033689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of osteoblast proliferation","termid":"GO:0033688"},{"relation_name":"negatively_regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoblast proliferation","synonyms":[{"name":"down regulation of osteoblast proliferation","type":"exact"},{"name":"down-regulation of osteoblast proliferation","type":"exact"},{"name":"downregulation of osteoblast proliferation","type":"exact"},{"name":"inhibition of osteoblast proliferation","type":"narrow"}],"termid":"GO:0033689"}


id: FYPO:0005556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin loading does not occur during the mitotic cell cycle. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["GO:0061780","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic cohesin loading","synonyms":[{"name":"abolished cohesin loading during mitotic cell cycle","type":"exact"},{"name":"abolished cohesin loading during vegetative growth","type":"exact"},{"name":"abolished mitotic cohesin association with chromatin","type":"exact"},{"name":"abolished mitotic cohesin localization to chromatin","type":"exact"},{"name":"mitotic cohesin loading abolished","type":"exact"}],"termid":"FYPO:0005556"}


id: MONDO:0006018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rheumatic syndrome of possibly allergic origin, usually affecting children and adolescents, and characterized by high fever, exanthema, arthralgia, leukocytosis, and increased sedimentation rate.","definition_xrefs":["MESH:D014924"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rheumatic fever","termid":"MONDO:0017767"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wissler syndrome","secondary_identifiers":["UMLS:C0043195","DOID:3047","MEDGEN:53087","SCTID:68190001"],"synonyms":[{"name":"Wissler syndrome","type":"exact"},{"name":"Wissler's subsepsis allergica","type":"exact"},{"name":"Wissler's syndrome","type":"exact"},{"name":"Wissler-Fanconi syndrome (finding)","type":"exact"}],"termid":"MONDO:0006018","xrefs":{"Monarch":{"xref_id":"0006018"}}}


id: PBO:0079819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UL16 binding protein 1","termid":"PBO:0079819"}


id: PBO:0051449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 4-69","termid":"PBO:0051449"}


id: PBO:0083737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity","termid":"PBO:0083737"}


id: MONDO:0010467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xq27.3q28 duplication syndrome is a recently described syndrome characterized by short stature, hypogonadism, developmental delay and facial dysmorphism.","definition_xrefs":["Orphanet:261483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome X","termid":"MONDO:0017010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xq27.3q28 duplication syndrome","secondary_identifiers":["GARD:17247","OMIM:300869","UMLS:C3275521","MEDGEN:477152"],"synonyms":[{"name":"Xq27.3-q28 microduplication syndrome","type":"exact"},{"name":"chromosome Xq27.3-q28 DUPLICATION syndrome","type":"related"},{"name":"chromosome xq27.3-q28 duplication syndrome, X-linked recessive","type":"exact"},{"name":"dup(X)(q27.3q28)","type":"exact"},{"name":"trisomy Xq27.3-q28","type":"exact"},{"name":"trisomy Xq27.3q28","type":"exact"}],"termid":"MONDO:0010467","xrefs":{"Monarch":{"xref_id":"0010467"}}}


id: PBO:0068554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 5, pseudogene","termid":"PBO:0068554"}


id: GO:0140882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of zinc ions from a cell, into the extracellular region.","definition_xrefs":["PMID:17355957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"zinc export across plasma membrane","synonyms":[{"name":"zinc ion export from cell","type":"exact"}],"termid":"GO:0140882"}


id: GO:0009145
data:
  {"annotated_genes":["SJAG_00438","SJAG_00836","SJAG_07003","SJAG_03925","SJAG_00133","SJAG_03114","SJAG_04422","SJAG_MIT15","SJAG_00885","SJAG_04849","SJAG_01298","SJAG_01471","SJAG_02598","SJAG_MIT37","SJAG_04122","SJAG_02887","SJAG_00915","SJAG_00542","SJAG_02564","SJAG_MIT09","SJAG_05204","SJAG_02105","SJAG_00985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99259,101421,107424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[66820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[106967,118188,88337,94040,92478,118193,102859,93064,92052,101002,107939,118182,104168,102212,107059,102830,114979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[106420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[117128],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside triphosphate anabolism","type":"exact"},{"name":"purine nucleoside triphosphate biosynthesis","type":"exact"},{"name":"purine nucleoside triphosphate formation","type":"exact"},{"name":"purine nucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009145","terms_by_termid":{"GO:0006183":null,"GO:0009216":null,"GO:0015986":null,"GO:0042776":null,"GO:1905706":null}}


id: PBO:0001256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytochelatin synthetase","termid":"PBO:0001256"}


id: PBO:0029430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0029430"}


id: MONDO:0100163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A inflammatory syndrome in children infected by the SARS-CoV-2 with similarities to Kawasaki disease. Clinical manifestations range from fever and inflammation to myocardial injury, shock, and development of coronary artery aneurysms.","definition_xrefs":["PMID:32511692","PMID:32630212","PMID:32529358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"multisystem inflammatory syndrome in children and adults","termid":"MONDO:0035375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COVID-19–associated multisystem inflammatory syndrome in children","secondary_identifiers":["DOID:0080711","NCIT:C172127"],"synonyms":[{"name":"COVID-19 -related paediatric inflammatory multisystem syndrome","type":"exact"},{"name":"COVID-19 -related pediatric inflammatory multisystem syndrome","type":"exact"},{"name":"COVID-19 Kawasaki-like syndrome","type":"exact"},{"name":"COVID-19 associated multisystem inflammatory syndrome in children","type":"exact"},{"name":"MIS-C","type":"exact"},{"name":"PIMS","type":"exact"},{"name":"PIMS-TS","type":"exact"},{"name":"PMIS","type":"exact"},{"name":"SARS-CoV-2 Kawasaki-like syndrome","type":"exact"},{"name":"multisystem inflammatory syndrome in children","type":"exact"},{"name":"multisystem inflammatory syndrome in children associated with COVID-19","type":"exact"},{"name":"multisystem inflammatory syndrome in children associated with coronavirus disease 2019","type":"exact"},{"name":"paediatric inflammatory multisystem syndrome","type":"exact"},{"name":"paediatric inflammatory multisystem syndrome temporally associated with SARS-CoV-2","type":"exact"},{"name":"paediatric inflammatory multisystem syndrome: temporally associated with SARS-CoV-2","type":"exact"},{"name":"paediatric multi-system inflammatory syndrome potentially associated with COVID-19","type":"exact"},{"name":"paediatric multisystem inflammatory syndrome","type":"exact"},{"name":"pediatric inflammatory multisystem syndrome","type":"exact"},{"name":"pediatric inflammatory multisystem syndrome temporally associated with SARS-CoV-2","type":"exact"},{"name":"pediatric inflammatory multisystem syndrome: temporally associated with SARS-CoV-2","type":"exact"},{"name":"pediatric multi-system inflammatory syndrome potentially associated with COVID-19","type":"exact"},{"name":"pediatric multisystem inflammatory syndrome","type":"exact"}],"termid":"MONDO:0100163","xrefs":{"Monarch":{"xref_id":"0100163"}}}


id: MONDO:0032736
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86338],"is_not":false,"summary":null,"term":"MONDO:0032736"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"is_obsolete":false,"name":"metabolic crises, recurrent, with variable encephalomyopathic features and neurologic regression","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1681269","OMIM:618416","UMLS:C5193083"],"synonyms":[{"name":"MECREN","type":"related"},{"name":"METABOLIC CRISES, RECURRENT, WITH VARIABLE ENCEPHALOMYOPATHIC FEATURES AND NEUROLOGIC REGRESSION","type":"related"}],"termid":"MONDO:0032736","terms_by_termid":{"MONDO:0032736":null},"xrefs":{"Monarch":{"xref_id":"0032736"}}}


id: GO:1901838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription of nuclear large rRNA mediated by RNA polymerase I.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase I","termid":"GO:0045943"},{"relation_name":"is_a","term_name":"regulation of transcription of nucleolar large rRNA by RNA polymerase I","termid":"GO:1901836"},{"relation_name":"positively_regulates","term_name":"nucleolar large rRNA transcription by RNA polymerase I","termid":"GO:0042790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription of nucleolar large rRNA by RNA polymerase I","synonyms":[{"name":"activation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"narrow"},{"name":"activation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"positive regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"up regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"up regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"up-regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"up-regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"upregulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"upregulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"}],"termid":"GO:1901838"}


id: MONDO:0060761
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85642],"is_not":false,"summary":null,"term":"MONDO:0060761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with epilepsy and hypoplasia of the corpus callosum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648487","UMLS:C4748137","OMIM:618090"],"synonyms":[{"name":"NEDEHCC","type":"related"},{"name":"neurodevelopmental disorder with epilepsy and hypoplasia of the corpus callosum","type":"exact"}],"termid":"MONDO:0060761","terms_by_termid":{"MONDO:0060761":null},"xrefs":{"Monarch":{"xref_id":"0060761"}}}


id: PBO:0049762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4","termid":"PBO:0049762"}


id: PBO:0045445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPYD antisense RNA 1","termid":"PBO:0045445"}


id: PBO:0057049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 136","termid":"PBO:0057049"}


id: PBO:0087584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); necessary for maintaining sister chromatid cohesion in prophase I of meiosis by inhibiting premature ubiquitination and subsequent degradation of substrates by the APC(Ama1) ubiquitin ligase","termid":"PBO:0087584"}


id: PBO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase alpha subunit Lsd1","termid":"PBO:0001615"}


id: PBO:0065635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 4","termid":"PBO:0065635"}


id: GO:0042315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of dipeptides, preferentially hydrophobic dipeptides including prolyl amino acids.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosol nonspecific dipeptidase activity (obsolete GO:0042315)","synonyms":[{"name":"cytosol nonspecific dipeptidase activity","type":"exact"}],"termid":"GO:0042315"}


id: PBO:0030908
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_vegetative_growth","termid":"PBO:0030908"}


id: GO:0048556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of the microsporocyte. The microsporocyte is a diploid cell in which meiosis will occur, resulting in four microspores. A microspore is a spore that, in vascular plants, gives rise to a male gametophyte.","definition_xrefs":["ISBN:047186840X","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"microsporocyte nucleus","secondary_identifiers":["GO:0043074"],"synonyms":[{"name":"microspore mother cell nucleus","type":"exact"},{"name":"pollen mother cell nucleus","type":"exact"}],"termid":"GO:0048556"}


id: MONDO:0958185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial trifunctional protein deficiency","termid":"MONDO:0012172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002525","MONDO:0005336"],"is_obsolete":false,"name":"mitochondrial trifunctional protein deficiency 2","secondary_identifiers":["MEDGEN:1841010","OMIM:620300","UMLS:C5830374"],"termid":"MONDO:0958185","xrefs":{"Monarch":{"xref_id":"0958185"}}}


id: PBO:0061630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 13","termid":"PBO:0061630"}


id: PBO:0090412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15","termid":"PBO:0090412"}


id: PBO:0048734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 5","termid":"PBO:0048734"}


id: PBO:0055032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2447","termid":"PBO:0055032"}


id: PBO:0055428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2858","termid":"PBO:0055428"}


id: MONDO:0019023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous mastocytosis is a term referring to a group of diseases characterized by abnormal accumulation and proliferation of skin mastocytes. In some cases (most commonly in adults), cutaneous mastocytosis may occur in association with mast cell infiltration of various extracutaneous organs, in which case the disorder is referred to as systemic mastocytosis.","definition_xrefs":["Orphanet:66646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"mastocytosis","termid":"MONDO:0007950"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"cutaneous mastocytosis","secondary_identifiers":["HP:0200151","NCIT:C7137","OMIM:154800","MESH:D034701","GARD:7842","SCTID:397012002","ONCOTREE:CMCD","MEDGEN:210143","DOID:3663","UMLS:C1136033","icd11.foundation:1300710062","EFO:1000886","ICDO:9740/1"],"synonyms":[{"name":"CM","type":"exact"},{"name":"CMCD","type":"related"},{"name":"cutaneous (skin) mastocytosis","type":"exact"},{"name":"cutaneous mastocytosis","type":"exact"},{"name":"cutaneous mastocytosis (disease)","type":"exact"},{"name":"mastocytosis, cutaneous","type":"exact"},{"name":"mastocytosis, systemic, somatic","type":"exact"}],"termid":"MONDO:0019023","xrefs":{"Monarch":{"xref_id":"0019023"}}}


id: GO:0110117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor cell differentiation.","definition_xrefs":["GOC:ha","PMID:16377567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of photoreceptor cell differentiation","termid":"GO:0046534"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"positively_regulates","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110117"}


id: PBO:0075267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 20","termid":"PBO:0075267"}


id: FYPO:0007844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the monomethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:17363370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 monomethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 monomethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 monomethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 monomethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007844"}


id: PBO:0031187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_thiamine_diphosphokinase_activity","termid":"PBO:0031187"}


id: PBO:0090602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase Tal1","termid":"PBO:0090602"}


id: GO:0062144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-amino-4-chloropent-4-enoate = chloride + H+ + L-propargylglycine.","definition_xrefs":["RHEA:59892","PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-propargylglycine synthase activity","termid":"GO:0062144"}


id: PBO:0047369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 22","termid":"PBO:0047369"}


id: PBO:0017554
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bypass of Yeast Ras","termid":"PBO:0017554"}


id: MONDO:0012739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of microtia, eye coloboma, and imperforation of the nasolacrimal duct.","definition_xrefs":["Orphanet:139450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia-eye coloboma-imperforation of the nasolacrimal duct syndrome","secondary_identifiers":["GARD:10300","MEDGEN:394835","OMIM:611863","UMLS:C2678482","MESH:C567512"],"synonyms":[{"name":"Balikova-Vermeesch syndrome","type":"exact"},{"name":"microtia eye coloboma and imperforation of the nasolacrimal duct","type":"related"},{"name":"microtia with nasolacrimal duct imperforation and eye coloboma","type":"related"}],"termid":"MONDO:0012739","xrefs":{"Monarch":{"xref_id":"0012739"}}}


id: MONDO:0014484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CDK6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 12, primary, autosomal recessive","secondary_identifiers":["DOID:0070284","GARD:16057","MEDGEN:863593","UMLS:C4015156","OMIM:616080"],"synonyms":[{"name":"CDK6 autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH12","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CDK6","type":"exact"},{"name":"microcephaly 12, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0014484","xrefs":{"Monarch":{"xref_id":"0014484"}}}


id: MONDO:0036491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An infrequent malignant neoplasm that occurs during childhood.","definition_xrefs":["NCIT:C114451"],"gene_count":0,"genotype_count":0,"name":"obsolete rare childhood malignant neoplasm (obsolete MONDO:0036491)","synonyms":[{"name":"Rare malignant neoplasm","type":"exact"},{"name":"rare childhood cancer","type":"exact"},{"name":"rare childhood malignant neoplasm","type":"exact"},{"name":"rare malignant childhood neoplasm","type":"exact"}],"termid":"MONDO:0036491","xrefs":{"Monarch":{"xref_id":"0036491"}}}


id: PBO:0080841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 5","termid":"PBO:0080841"}


id: PBO:0028060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_DNA_replication_during_vegetative_growth","termid":"PBO:0028060"}


id: MONDO:0019937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare gynecologic or obstetric disease (obsolete MONDO:0019937)","secondary_identifiers":["Orphanet:96344"],"termid":"MONDO:0019937","xrefs":{"Monarch":{"xref_id":"0019937"}}}


id: GO:0042355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-fucose (6-deoxy-Lgalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose catabolic process","termid":"GO:0019317"},{"relation_name":"is_a","term_name":"L-fucose metabolic process","termid":"GO:0042354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"L-fucose catabolic process","synonyms":[{"name":"L-fucose breakdown","type":"exact"},{"name":"L-fucose catabolism","type":"exact"},{"name":"L-fucose degradation","type":"exact"}],"termid":"GO:0042355"}


id: MONDO:0032814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"COL4A1-related disorder","termid":"MONDO:0800461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microangiopathy and leukoencephalopathy, pontine, autosomal dominant","secondary_identifiers":["OMIM:618564","Orphanet:477749","UMLS:C5231411","GARD:17855","MEDGEN:1684781"],"synonyms":[{"name":"Dementia, Hereditary Multi-Infarct, Swedish Type","type":"related"},{"name":"MICROANGIOPATHY AND LEUKOENCEPHALOPATHY, PONTINE, AUTOSOMAL DOMINANT","type":"exact"},{"name":"PADMAL","type":"exact"},{"name":"pontine autosomal dominant microangiopathy with leukoencephalopathy","type":"exact"}],"termid":"MONDO:0032814","xrefs":{"Monarch":{"xref_id":"0032814"}}}


id: MONDO:0015757
data:
  {"annotated_genes":["SJAG_00980","SJAG_02460","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85406,85407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[86552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_02460":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoid hemopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680515","GARD:20131","MEDGEN:1842533","Orphanet:171898"],"termid":"MONDO:0015757","terms_by_termid":{"MONDO:0009693":null,"MONDO:0011508":null},"xrefs":{"Monarch":{"xref_id":"0015757"}}}


id: PBO:0073423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 1","termid":"PBO:0073423"}


id: MONDO:0018461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Angelman syndrome","termid":"MONDO:0007113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angelman syndrome due to a point mutation","secondary_identifiers":["GARD:21732","MEDGEN:1842258","Orphanet:411511","UMLS:C5681146"],"termid":"MONDO:0018461","xrefs":{"Monarch":{"xref_id":"0018461"}}}


id: PBO:0004113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv41 (predicted)","termid":"PBO:0004113"}


id: PR:O14081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] 106 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.16c","synonyms":[{"name":"Spom972h-SPACUNK4.16c","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14081"}


id: GO:0000732
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99829],"is_not":false,"summary":null,"term":"GO:0000732"},{"annotations":[99831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"The rejection of the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA. The Watson-Crick base pairing in the original duplex is restored. The rejected 3' single-strand DNA molecule reanneals with its original complement to reform two intact duplex molecules.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"DNA strand displacement","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-loop dissociation","type":"related"},{"name":"D-loop processing","type":"related"},{"name":"displacement loop dissociation","type":"related"},{"name":"displacement loop processing","type":"related"},{"name":"strand displacement","type":"exact"}],"termid":"GO:0000732","terms_by_termid":{"GO:0000732":null,"GO:1902346":null}}


id: PBO:0030265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_decamethylenediguanidine","termid":"PBO:0030265"}


id: MONDO:0019070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete liposarcoma (obsolete MONDO:0019070)","termid":"MONDO:0019070","xrefs":{"Monarch":{"xref_id":"0019070"}}}


id: GO:0097229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short tip of the sperm flagellum, adjacent to the sperm principal piece and furthest from the sperm head, which contains only the axoneme surrounded by the plasma membrane.","definition_xrefs":["MP:0009837","GOC:cjm","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm end piece","termid":"GO:0097229"}


id: GO:1902805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["GOC:TermGenie","PMID:23527112","GOC:kmv","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle transport","synonyms":[{"name":"activation of synaptic vesicle fission","type":"related"},{"name":"activation of synaptic vesicle fusion","type":"related"},{"name":"activation of synaptic vesicle transport","type":"narrow"},{"name":"positive regulation of synaptic vesicle fission","type":"related"},{"name":"positive regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle fission","type":"related"},{"name":"up regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle transport","type":"exact"},{"name":"up-regulation of synaptic vesicle fission","type":"related"},{"name":"up-regulation of synaptic vesicle fusion","type":"related"},{"name":"up-regulation of synaptic vesicle transport","type":"exact"},{"name":"upregulation of synaptic vesicle fission","type":"related"},{"name":"upregulation of synaptic vesicle fusion","type":"related"},{"name":"upregulation of synaptic vesicle transport","type":"exact"}],"termid":"GO:1902805"}


id: MONDO:0006744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An accumulation of endolymph in the inner ear (labyrinth) leading to buildup of pressure and distortion of intralabyrinthine structures, such as cochlea and semicircular canals. It is characterized by sensorineural hearing loss; tinnitus; and sometimes vertigo.","definition_xrefs":["MESH:D018159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endolymphatic hydrops","secondary_identifiers":["MedDRA:10049934","ICD9:386.8","SCTID:27621000119100","DOID:9848","MEDGEN:60183","EFO:1000918","UMLS:C0206586"],"synonyms":[{"name":"labyrinthine hydrops","type":"exact"}],"termid":"MONDO:0006744","xrefs":{"Monarch":{"xref_id":"0006744"}}}


id: PBO:0049341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi","termid":"PBO:0049341"}


id: MOD:00203
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to D-asparagine.","definition_xrefs":["RESID:AA0196","ChEBI:29957","PubMed:1859408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-asparagine","synonyms":[{"name":"(R)-2-amino-4-butanediamic acid","type":"exact"},{"name":"D-Asn","type":"exact"},{"name":"D-alpha-aminosuccinamic acid","type":"exact"},{"name":"D-asparagine","type":"exact"},{"name":"D-aspartic acid beta-amide","type":"exact"},{"name":"MOD_RES D-asparagine","type":"exact"}],"termid":"MOD:00203"}


id: PBO:0083440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR378W","termid":"PBO:0083440"}


id: MONDO:0013885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multisystemic genetic disorder characterized by a characteristic facial features with macrocephaly, overgrowth in infancy, intellectual disability and behavioral problems including anxieties and aggressiveness.","definition_xrefs":["Orphanet:420179"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Sotos syndrome","termid":"MONDO:0019349"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malan overgrowth syndrome","secondary_identifiers":["UMLS:C3553660","GARD:13811","DOID:0112102","MEDGEN:766574","SCTID:763795006","OMIM:614753"],"synonyms":[{"name":"Malan syndrome","type":"related"},{"name":"SOTOS2","type":"related"},{"name":"Sotos syndrome 2","type":"exact"},{"name":"Sotos syndrome type 2","type":"exact"}],"termid":"MONDO:0013885","xrefs":{"Monarch":{"xref_id":"0013885"}}}


id: MONDO:0004103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of papillary carcinoma of the thyroid gland characterized by the presence of tall malignant follicular cells, arranged in papillary and trabecular patterns. Necrotic changes and high mitotic activity are present.","definition_xrefs":["NCIT:C35558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"tall cell variant thyroid gland papillary carcinoma","secondary_identifiers":["MEDGEN:234416","DOID:7089","UMLS:C1336695"],"synonyms":[{"name":"tall cell variant papillary carcinoma","type":"exact"},{"name":"tall cell variant thyroid gland papillary carcinoma","type":"exact"}],"termid":"MONDO:0004103","xrefs":{"Monarch":{"xref_id":"0004103"}}}


id: PBO:0048786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 15","termid":"PBO:0048786"}


id: PR:O94302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RFT1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13117:SF5","OMA:SCHPO03770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharide translocation protein rft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.19","secondary_identifiers":["UniProtKB:O94302"],"synonyms":[{"name":"Spom972h-RFT1","type":"exact"}],"termid":"PR:O94302"}


id: PBO:0061005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS like 1","termid":"PBO:0061005"}


id: MONDO:1010419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, non-human animal","termid":"MONDO:1010003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, domestic cat","secondary_identifiers":["OMIA:000703-9685"],"termid":"MONDO:1010419","xrefs":{"Monarch":{"xref_id":"1010419"}}}


id: GO:1900836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900185"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of emericellin biosynthetic process","termid":"GO:1900834"},{"relation_name":"positively_regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of emericellin biosynthetic process","termid":"GO:1900836"}


id: FYECO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tunicamycin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tunicamycin","synonyms":[{"name":"tunicamycin added","type":"exact"}],"termid":"FYECO:0000412"}


id: PBO:0088526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific disordered protein","termid":"PBO:0088526"}


id: MONDO:1011145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary agenesis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary agenesis, non-human animal","termid":"MONDO:1010290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary agenesis, horse","secondary_identifiers":["OMIA:002520-9796"],"termid":"MONDO:1011145","xrefs":{"Monarch":{"xref_id":"1011145"}}}


id: GO:1905275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a Rohon-Beard neuron.","definition_xrefs":["GOC:TermGenie","ZFIN:ZDB-PUB-120807-45","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Rohon-Beard neuron differentiation","termid":"GO:1905275"}


id: PR:A6X993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.03c gene.","definition_xrefs":["UniProtKB:A6X993","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C338.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.03c","synonyms":[{"name":"Spom972h-SPCC338.03c","type":"exact"}],"termid":"PR:A6X993"}


id: GO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a pattern along a line or around a point.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis specification","synonyms":[{"name":"axis determination","type":"related"}],"termid":"GO:0009798"}


id: PBO:0075823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCO-spondin, pseudogene","termid":"PBO:0075823"}


id: FYPO:0007092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is increased during a cellular response to zinc ions, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:31515876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA binding","termid":"FYPO:0000657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000653"],"is_obsolete":false,"name":"increased DNA binding during cellular response to zinc ion","synonyms":[{"name":"increased DNA binding during cellular response to zinc","type":"exact"}],"termid":"FYPO:0007092"}


id: MONDO:0003323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0003323 (obsolete MONDO:0003323)","termid":"MONDO:0003323","xrefs":{"Monarch":{"xref_id":"0003323"}}}


id: GO:0036063
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cone-shaped structure in the head of a spermatozoon, which is formed by the coalescence of Golgi fragments following the completion of meiosis. The acroblast is situated adjacent to the acrosomal vesicle.","definition_xrefs":["GOC:sart","PMID:19934220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"acroblast","synonyms":[{"name":"spermatid acroblast","type":"exact"}],"termid":"GO:0036063"}


id: GO:0090728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases brood size. Brood size is the number of progeny that survive embryogenesis and are cared for at one time.","definition_xrefs":["GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of brood size","termid":"GO:0090728"}


id: MONDO:0012894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteoarthritis","termid":"MONDO:0005178"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis susceptibility 6","secondary_identifiers":["ICD9:715.96","OMIM:612401","SCTID:239873007"],"synonyms":[{"name":"OS6","type":"exact"},{"name":"osteoarthritis of knee","type":"related"},{"name":"osteoarthritis susceptibility 6","type":"exact"}],"termid":"MONDO:0012894","xrefs":{"Monarch":{"xref_id":"0012894"}}}


id: MONDO:0011783
data:
  {"annotated_genes":["SJAG_00437"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84973],"is_not":false,"summary":null,"term":"MONDO:0011783"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by facial dysmorphism (prominent forehead, large ears, thin upper lip), generalized hypotonia, feeding difficulties, moderate to severe developmental delay, progressive microcephaly, frequent upper respiratory tract infections due to impaired immunity with decreased immunoglobulin levels, and decreased coagulation factors. Additional features include hypogonadism with or without hypospadias in males, skeletal anomalies, seizures and cardiac anomalies in some cases. The disease is caused by loss of function mutations of the gene ALG12 (22q13.33).","definition_xrefs":["Orphanet:79324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00437":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"ALG12-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C126873","ICD9:271.8","GARD:9833","MEDGEN:443954","MESH:C535745","DOID:0080559","OMIM:607143","SCTID:711155008","UMLS:C2931001"],"synonyms":[{"name":"ALG12-CDG","type":"exact"},{"name":"ALG12-CDG (CDG-Ig)","type":"related"},{"name":"ALG12-congenital disorder of glycosylation","type":"exact"},{"name":"CDG 1G","type":"related"},{"name":"CDG Ig","type":"related"},{"name":"CDG syndrome type Ig","type":"exact"},{"name":"CDG-Ig","type":"exact"},{"name":"CDG1G","type":"exact"},{"name":"CDGIg","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ig","type":"exact"},{"name":"congenital disorder of glycosylation type 1g","type":"exact"},{"name":"congenital disorder of glycosylation type Ig","type":"exact"},{"name":"congenital disorder of glycosylation, type Ig","type":"related"},{"name":"mannosyltransferase 8 deficiency","type":"exact"}],"termid":"MONDO:0011783","terms_by_termid":{"MONDO:0011783":null},"xrefs":{"Monarch":{"xref_id":"0011783"}}}


id: GO:0009465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete soluble cytochrome b562 (obsolete GO:0009465)","synonyms":[{"name":"soluble cytochrome b562","type":"exact"}],"termid":"GO:0009465"}


id: GO:0034638
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116108],"is_not":false,"summary":null,"term":"GO:0034638"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine breakdown","type":"exact"},{"name":"phosphatidylcholine catabolism","type":"exact"},{"name":"phosphatidylcholine degradation","type":"exact"}],"termid":"GO:0034638","terms_by_termid":{"GO:0034638":null}}


id: PBO:0002601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr5","termid":"PBO:0002601"}


id: MONDO:0016095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm with skeletal muscle differentiation arising from the vagina.","definition_xrefs":["NCIT:C128080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vagina sarcoma","termid":"MONDO:0002140"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal rhabdomyosarcoma","secondary_identifiers":["UMLS:C4288035","MEDGEN:925567","Orphanet:206492","SCTID:766759009","GARD:20348"],"synonyms":[{"name":"rhabdomyosarcoma (disease) of vagina","type":"exact"},{"name":"vagina rhabdomyosarcoma","type":"exact"},{"name":"vagina rhabdomyosarcoma (disease)","type":"exact"},{"name":"vaginal rhabdomyosarcoma","type":"exact"},{"name":"vulvovaginal rhabdomyosarcoma","type":"related"}],"termid":"MONDO:0016095","xrefs":{"Monarch":{"xref_id":"0016095"}}}


id: GO:0016581
data:
  {"annotated_genes":["SJAG_02778","SJAG_00934","SJAG_03982","SJAG_03844"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91270,107313,111243,112422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"}]},"cv_name":"cellular_component","definition":"An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins.","definition_xrefs":["PMID:10589671","PMID:11743021","PMID:17289569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"},{"relation_name":"is_a","term_name":"CHD-type complex","termid":"GO:0090545"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"NuRD complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mi-2 complex","type":"narrow"},{"name":"NRD complex","type":"exact"},{"name":"nucleosome remodeling and histone deacetylation complex","type":"exact"}],"termid":"GO:0016581","terms_by_termid":{"GO:0070824":null}}


id: MONDO:1011926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shivers, non-human animal","secondary_identifiers":["OMIA:000676"],"termid":"MONDO:1011926","xrefs":{"Monarch":{"xref_id":"1011926"}}}


id: PR:Q10062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoporphyrinogen oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10742:SF16","PRO:DNx","OMA:SCHPO00102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.07c","secondary_identifiers":["UniProtKB:Q10062"],"synonyms":[{"name":"PPO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPOX","type":"exact"}],"termid":"PR:Q10062"}


id: PBO:0072561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS related","termid":"PBO:0072561"}


id: PBO:0067447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 569, pseudogene","termid":"PBO:0067447"}


id: GO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When a branched chain family amino acid, leucine, isoleucine, or valine, is used as the substrate, 3-methylbutanoate, 2-methylbutanoate, or 2-methylpropanoate, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process to carboxylic acid via Ehrlich pathway","synonyms":[{"name":"branched chain family amino acid catabolic process to carboxylic acid via Ehrlich pathway","type":"exact"}],"termid":"GO:0000953"}


id: PBO:0012566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex subunit, Csc4","termid":"PBO:0012566"}


id: PBO:0015228
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CET1","termid":"PBO:0015228"}


id: GO:1903365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fear response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:8677262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fear response","synonyms":[{"name":"regulation of physiological fear response","type":"exact"}],"termid":"GO:1903365"}


id: PBO:0074602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11C","termid":"PBO:0074602"}


id: MONDO:0021762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe, dysmorphic condition is characterized by shortening of median and distal segments of the limbs without anomalies of the spine.","definition_xrefs":["PMID:6331794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrocoxomesomelic dysplasia","secondary_identifiers":["GARD:483"],"synonyms":[{"name":"acro-coxo-mesomelic dwarfism","type":"exact"}],"termid":"MONDO:0021762","xrefs":{"Monarch":{"xref_id":"0021762"}}}


id: GO:0004219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyroglutamyl-peptide + H2O = pyroglutamate + peptide.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete pyroglutamyl-peptidase I activity (obsolete GO:0004219)","synonyms":[{"name":"pyroglutamyl-peptidase I activity","type":"exact"}],"termid":"GO:0004219"}


id: PBO:0048010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 8","termid":"PBO:0048010"}


id: PBO:0068075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 380","termid":"PBO:0068075"}


id: GO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a type B pancreatic cell fate and its capacity to differentiate into a type B pancreatic cell. A type B pancreatic cell is a cell located towards center of the islets of Langerhans that secretes insulin.","definition_xrefs":["GOC:dph","CL:0000169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"type B pancreatic cell differentiation","termid":"GO:0003309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell fate commitment","synonyms":[{"name":"pancreatic B cell fate commitment","type":"exact"}],"termid":"GO:0003327"}


id: PBO:0001041
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Pmk1","termid":"PBO:0001041"}


id: MONDO:0003222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary tumor of the central nervous system that arises from leptomeningeal melanocytes. It may present as a diffuse proliferative leptomeningeal process (often as a component of the neurocutaneous melanosis complex) or as a distinct mass lesion.","definition_xrefs":["NCIT:C5504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"melanocytic neoplasm","termid":"MONDO:0021143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system melanocytic neoplasm","secondary_identifiers":["SCTID:277523004","MEDGEN:232333","DOID:4955","UMLS:C1332887"],"synonyms":[{"name":"CNS melanocytic neoplasm","type":"exact"},{"name":"CNS melanocytic tumor","type":"exact"},{"name":"CNS melanocytic tumour","type":"exact"},{"name":"central nervous system melanocytic neoplasm","type":"exact"},{"name":"central nervous system melanocytic neoplasms","type":"exact"},{"name":"central nervous system melanocytic tumor","type":"exact"},{"name":"central nervous system melanocytic tumour","type":"exact"},{"name":"central nervous system primary melanocytic lesion","type":"related"},{"name":"melanocytic neoplasm of CNS","type":"exact"},{"name":"melanocytic neoplasm of central nervous system","type":"exact"},{"name":"melanocytic neoplasm of the CNS","type":"exact"},{"name":"melanocytic neoplasm of the central nervous system","type":"exact"},{"name":"melanocytic tumor of CNS","type":"exact"},{"name":"melanocytic tumor of central nervous system","type":"exact"},{"name":"melanocytic tumor of the CNS","type":"exact"},{"name":"melanocytic tumor of the central nervous system","type":"exact"},{"name":"melanocytic tumour of CNS","type":"exact"},{"name":"melanocytic tumour of central nervous system","type":"exact"},{"name":"melanocytic tumour of the CNS","type":"exact"},{"name":"melanocytic tumour of the central nervous system","type":"exact"},{"name":"primary melanocytic lesion of meninges","type":"related"},{"name":"primary melanocytic lesions of the CNS","type":"related"}],"termid":"MONDO:0003222","xrefs":{"Monarch":{"xref_id":"0003222"}}}


id: FYPO:0003319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which mannose-specific flocculation is increased. Mannose-specific flocculation is the non-sexual aggregation of cells, mediated via the binding of cell wall proteins on one cell to mannose residues on the other, and when it is increased cells adhere to each other more strongly or to a greater extent than normal.","definition_xrefs":["GO:0036350","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell-cell adhesion","termid":"FYPO:0005760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased mannose-specific flocculation","synonyms":[{"name":"increased cell-cell adhesion involved in mannose-specific flocculation","type":"exact"},{"name":"increased mannose-specific flocculation during mitotic cell cycle","type":"related"},{"name":"increased mannose-specific flocculation during vegetative growth","type":"exact"}],"termid":"FYPO:0003319"}


id: PBO:0085959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression affects endocytic protein trafficking; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0085959"}


id: PBO:0065102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type II regulatory subunit alpha","termid":"PBO:0065102"}


id: MONDO:0003131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital mesoblastic nephroma (obsolete MONDO:0003131)","termid":"MONDO:0003131","xrefs":{"Monarch":{"xref_id":"0003131"}}}


id: PBO:0071417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 23","termid":"PBO:0071417"}


id: PBO:0026901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mutation_rate","termid":"PBO:0026901"}


id: PBO:0042036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 89","termid":"PBO:0042036"}


id: PBO:0075531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E11","termid":"PBO:0075531"}


id: GO:0016897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA exonuclease activity, producing 3'-phosphomonoesters (obsolete GO:0016897)","synonyms":[{"name":"exoribonuclease activity, producing 3'-phosphomonoesters","type":"exact"}],"termid":"GO:0016897"}


id: PBO:0075130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U11/U12 subunit 35","termid":"PBO:0075130"}


id: PBO:0028388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_glyoxal","termid":"PBO:0028388"}


id: MONDO:0002421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chorioangioma (obsolete MONDO:0002421)","termid":"MONDO:0002421","xrefs":{"Monarch":{"xref_id":"0002421"}}}


id: PBO:0057429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550a-2","termid":"PBO:0057429"}


id: PR:O60110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ER membrane protein complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein oca3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.01c","secondary_identifiers":["UniProtKB:O60110"],"synonyms":[{"name":"Spom972h-EMC2","type":"exact"},{"name":"overexpression-mediated cell cycle arrest protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60110"}


id: PBO:0079485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXN2 pseudogene 1","termid":"PBO:0079485"}


id: MONDO:0019201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyrotoxic periodic paralysis (TPP) is a rare neurological disease characterized by recurrent episodes of paralysis and hypokalemia during a thyrotoxic state.","definition_xrefs":["Orphanet:79102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial periodic paralysis","termid":"MONDO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyrotoxic periodic paralysis","secondary_identifiers":["SCTID:30967002","MEDGEN:120639","UMLS:C0268446","GARD:10814","OMIMPS:188580","icd11.foundation:1457837313","MedDRA:10043788"],"synonyms":[{"name":"thyrotoxic hypokalemic periodic paralysis","type":"exact"}],"termid":"MONDO:0019201","xrefs":{"Monarch":{"xref_id":"0019201"}}}


id: PBO:0079513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase 2","termid":"PBO:0079513"}


id: PBO:0077742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducer of ERBB2, 2","termid":"PBO:0077742"}


id: GO:1900296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of heptasaccharide transport","termid":"GO:1900294"},{"relation_name":"positively_regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of heptasaccharide transport","synonyms":[{"name":"activation of heptasaccharide transport","type":"narrow"},{"name":"up regulation of heptasaccharide transport","type":"exact"},{"name":"up-regulation of heptasaccharide transport","type":"exact"},{"name":"upregulation of heptasaccharide transport","type":"exact"}],"termid":"GO:1900296"}


id: PBO:0113249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oligomeric mitochondrial matrix chaperone; cooperates with Ssc1p in mitochondrial thermotolerance after heat shock; prevents the aggregation of misfolded proteins as well as resolubilize protein aggregates; involved in response to ethanol stress","termid":"PBO:0113249"}


id: MONDO:0007727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A periodic fever syndrome, characterized by recurrent fever, arthralgia, myalgia and tender skin lesions lasting for 1 to 3 weeks, associated with skin, joint, ocular and serosal inflammation and complicated by secondary amyloidosis.","definition_xrefs":["Orphanet:32960"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autosomal dominant familial periodic fever","secondary_identifiers":["GARD:8457","NCIT:C119051","OMIM:142680","NANDO:1200472","UMLS:C1275126","icd11.foundation:1869883509","NORD:1804","MEDGEN:226899","NANDO:2200433","SCTID:403833009","MESH:C536657","DOID:0090018"],"synonyms":[{"name":"FHF","type":"exact"},{"name":"FPF","type":"related"},{"name":"Hibernian fever, familial","type":"exact"},{"name":"TNF receptor 1-associated periodic fever syndrome","type":"exact"},{"name":"TNF receptor 1-associated periodic syndrome","type":"exact"},{"name":"TNF receptor-associated periodic syndrome","type":"exact"},{"name":"TRAPS","type":"exact"},{"name":"TRAPS syndrome","type":"exact"},{"name":"Tumor Necrosis Factor Receptor-Associated Periodic Syndrome","type":"exact"},{"name":"familial Hibernian fever","type":"exact"},{"name":"periodic FEVER, familial, autosomal dominant","type":"related"},{"name":"tumor necrosis factor receptor 1 associated periodic syndrome","type":"exact"},{"name":"tumor necrosis factor receptor 1-associated periodic syndrome","type":"exact"},{"name":"tumor necrosis factor receptor-associated periodic syndrome","type":"exact"},{"name":"tumour necrosis factor receptor 1 associated periodic syndrome","type":"exact"},{"name":"tumour necrosis factor receptor 1-associated periodic syndrome","type":"exact"},{"name":"tumour necrosis factor receptor-associated periodic syndrome","type":"exact"}],"termid":"MONDO:0007727","xrefs":{"Monarch":{"xref_id":"0007727"}}}


id: PBO:0054331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1724","termid":"PBO:0054331"}


id: PBO:0085711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in spore wall assembly; has similarity to 1,3-beta-D-glucan synthase catalytic subunits Fks1p and Gsc2p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085711"}


id: GO:1904780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to centrosome.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to centrosome","termid":"GO:1904779"},{"relation_name":"negatively_regulates","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to centrosome","synonyms":[{"name":"down regulation of protein localisation to centrosome","type":"exact"},{"name":"down regulation of protein localization to centrosome","type":"exact"},{"name":"down-regulation of protein localisation to centrosome","type":"exact"},{"name":"down-regulation of protein localization to centrosome","type":"exact"},{"name":"downregulation of protein localisation to centrosome","type":"exact"},{"name":"downregulation of protein localization to centrosome","type":"exact"},{"name":"inhibition of protein localisation to centrosome","type":"narrow"},{"name":"inhibition of protein localization to centrosome","type":"narrow"},{"name":"negative regulation of protein localisation to centrosome","type":"exact"}],"termid":"GO:1904780"}


id: GO:0000121
data:
  {"annotated_genes":["SJAG_04964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99451],"is_not":false,"summary":null,"term":"GO:0000121"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sn-glycerol 1-phosphate = glycerol + phosphate.","definition_xrefs":["RHEA:46084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"glycerol-1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glycerol phosphatase activity","type":"related"},{"name":"alpha-glycerophosphatase activity","type":"related"},{"name":"glycerol 3-phosphatase activity","type":"related"},{"name":"glycerol 3-phosphate phosphohydrolase activity","type":"related"},{"name":"glycerol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"glycerol-3-phosphate phosphatase activity","type":"related"}],"termid":"GO:0000121","terms_by_termid":{"GO:0000121":null}}


id: GO:0017159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + cysteamine.","definition_xrefs":["EC:3.5.1.92","RHEA:13445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"pantetheine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02973","MetaCyc:3.5.1.92-RXN","Reactome:R-HSA-8938300"],"synonyms":[{"name":"(R)-pantetheine amidohydrolase activity","type":"related"},{"name":"pantetheinase activity","type":"related"},{"name":"vanin","type":"related"},{"name":"vanin-1","type":"related"}],"termid":"GO:0017159"}


id: PBO:0065531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 3 pseudogene 3","termid":"PBO:0065531"}


id: GO:0102655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-trans-16:1-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-trans-16:1-phosphatidylglycerol desaturase activity (obsolete GO:0102655)","termid":"GO:0102655"}


id: PBO:0059967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 12","termid":"PBO:0059967"}


id: PBO:0065981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAET1E antisense RNA 1","termid":"PBO:0065981"}


id: SO:0000895
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by DNA methylation, resulting in repression of transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced_by_DNA_modification","termid":"SO:0000894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_DNA_methylation","synonyms":[{"name":"silenced by DNA methylation","type":"exact"}],"termid":"SO:0000895"}


id: PBO:0074472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin like 1","termid":"PBO:0074472"}


id: GO:0052308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism modulates the frequency, rate or extent of the innate immune response, the first line of defense against infection, of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction (obsolete GO:0052308)","synonyms":[{"name":"pathogen-associated molecular pattern dependent modulation by organism of innate immunity in other organism during symbiotic interaction","type":"related"},{"name":"pathogen-associated molecular pattern dependent modulation by organism of innate immunity in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0052308"}


id: PBO:0000786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"para-hydroxybenzoate--polyprenyltransferasePpt1","termid":"PBO:0000786"}


id: PBO:0072992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm polycomb group protein like 1","termid":"PBO:0072992"}


id: PBO:0071216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 57","termid":"PBO:0071216"}


id: GO:0048902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a migrating neuromast primordium deposits clusters of undifferentiated cells (proneuromasts) along its migratory path in the developing anterior lateral line.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast deposition","termid":"GO:0048885"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast deposition","termid":"GO:0048902"}


id: RO:HOM0000006
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homology that is defined by similarity with regard to selected structural parameters.","definition_xrefs":["ISBN:0123195837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homology_relationship_with","termid":"RO:HOM0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_structural_homology_relationship_with","synonyms":[{"name":"idealistic homology","type":"related"},{"name":"structural homologous to","type":"exact"}],"termid":"RO:HOM0000006"}


id: GO:0035278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference pathway in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs.","definition_xrefs":["PMID:14744438","PMID:15196554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"miRNA-mediated gene silencing by inhibition of translation","synonyms":[{"name":"down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"miRNA mediated inhibition of translation","type":"exact"},{"name":"miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035278"}


id: GO:0042783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which an organism avoids the effects of the host organism's immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mb","PMID:12439615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"},{"relation_name":"is_a","term_name":"response to host immune response","termid":"GO:0052572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of host immune response","secondary_identifiers":["GO:0020012","GO:0042782","GO:0051809","GO:0051805","GO:0051810"],"synonyms":[{"name":"active evasion of host immune response","type":"related"},{"name":"active evasion of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion","type":"broad"},{"name":"evasion by virus of host immune response","type":"related"},{"name":"evasion of host immune response","type":"exact"},{"name":"evasion or tolerance of host immune response","type":"broad"},{"name":"immune evasion","type":"exact"},{"name":"mitigation by virus of host immune response","type":"related"},{"name":"mitigation of host immune response","type":"related"},{"name":"mitigation of host immune response by virus","type":"related"},{"name":"passive evasion of host immune response","type":"related"},{"name":"passive evasion of immune response of other organism involved in symbiotic interaction","type":"related"},{"name":"passive immune evasion","type":"related"},{"name":"suppression by virus of host immune response","type":"related"}],"termid":"GO:0042783"}


id: MONDO:0006617
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"Skin diseases characterized by local or general distributions of blisters. They are classified according to the site and mode of blister formation. Lesions can appear spontaneously or be precipitated by infection, trauma, or sunlight. Etiologies include immunologic and genetic factors. (From Scientific American Medicine, 1990)","definition_xrefs":["MESH:D012872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vesiculobullous skin disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0037275","EFO:1000774","DOID:2731","MEDGEN:20778"],"synonyms":[{"name":"Sneddon Wilkinson disease","type":"narrow"},{"name":"Sneddon-Wilkinson disease","type":"narrow"},{"name":"bullous dermatoses","type":"related"},{"name":"bullous skin disease","type":"related"},{"name":"bullous skin diseases","type":"related"},{"name":"dermatoses, bullous","type":"related"},{"name":"dermatoses, subcorneal pustular","type":"related"},{"name":"dermatoses, vesiculobullous","type":"related"},{"name":"dermatosis, subcorneal pustular","type":"related"},{"name":"pustular dermatoses, subcorneal","type":"related"},{"name":"pustular dermatosis, subcorneal","type":"related"},{"name":"skin disease, bullous","type":"related"},{"name":"skin disease, vesicular","type":"related"},{"name":"skin disease, vesiculobullous","type":"related"},{"name":"skin diseases, bullous","type":"related"},{"name":"skin diseases, vesicular","type":"narrow"},{"name":"subcorneal pustular dermatoses","type":"narrow"},{"name":"subcorneal pustular dermatosis","type":"narrow"},{"name":"vesicular skin disease","type":"related"},{"name":"vesicular skin diseases","type":"related"},{"name":"vesiculobullous dermatoses","type":"related"},{"name":"vesiculobullous skin disease","type":"exact"},{"name":"vesiculobullous skin diseases","type":"related"}],"termid":"MONDO:0006617","terms_by_termid":{"MONDO:0008218":null},"xrefs":{"Monarch":{"xref_id":"0006617"}}}


id: PBO:0075676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spexin hormone","termid":"PBO:0075676"}


id: PBO:0045233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 1","termid":"PBO:0045233"}


id: PBO:0086779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YDR524C-B has a paralog, YCL048W-A, that arose from the whole genome duplication","termid":"PBO:0086779"}


id: GO:1902407
data:
  {"annotated_genes":["SJAG_00082","SJAG_00228","SJAG_01805","SJAG_03596","SJAG_01143","SJAG_04498","SJAG_04077","SJAG_02592","SJAG_02700","SJAG_03703","SJAG_01894","SJAG_04703","SJAG_03025","SJAG_04930","SJAG_03045","SJAG_04982","SJAG_01732","SJAG_04887","SJAG_00268","SJAG_03048","SJAG_04597","SJAG_00279","SJAG_02431","SJAG_00700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98095,111441,91528,96842,97115,96917,117586,101606,117006,117765,91788,118553,91740,100449,101746,97224,87470,94482,116165,111011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[97225],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[101550],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[89203,93610],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[93576,93005,118658],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any assembly of mitotic cytokinetic actomyosin apparatus.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in cytokinesis","termid":"GO:0000912"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"assembly of actomyosin apparatus involved in mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin apparatus assembly involved in cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"cytokinesis, formation of actomyosin apparatus involved in mitotic cell cycle","type":"exact"},{"name":"formation of actomyosin apparatus involved in cytokinesis involved in mitotic cell cycle","type":"related"}],"termid":"GO:1902407","terms_by_termid":{"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: PBO:0064093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pitrilysin metallopeptidase 1","termid":"PBO:0064093"}


id: MONDO:0006013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Demyelinating leukoencephalomyelitis of sheep caused by the visna-maedi virus. It is similar to but not the same as scrapie.","definition_xrefs":["MESH:D016182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visna disease","synonyms":[{"name":"Visna/maedi virus caused disease or disorder","type":"exact"},{"name":"Visna/maedi virus disease or disorder","type":"exact"},{"name":"Visna/maedi virus infectious disease","type":"exact"}],"termid":"MONDO:0006013","xrefs":{"Monarch":{"xref_id":"0006013"}}}


id: PBO:0054945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2359","termid":"PBO:0054945"}


id: PBO:0053225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"legumain","termid":"PBO:0053225"}


id: FYPO:0000803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of glycerone (also called 1,3-dihydroxypropan-2-one, dihydroxyacetone, or DHA) released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of DHA in growth medium","synonyms":[{"name":"increased accumulation of DHA in growth medium","type":"related"},{"name":"increased concentration of 1,3-dihydroxypropan-2-one in growth medium","type":"exact"},{"name":"increased concentration of dihydroxyacetone in growth medium","type":"exact"},{"name":"increased concentration of glycerone in growth medium","type":"exact"},{"name":"increased level of DHA in growth medium","type":"exact"},{"name":"increased release of DHA into growth medium","type":"related"}],"termid":"FYPO:0000803"}


id: PBO:0046601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 3","termid":"PBO:0046601"}


id: GO:0050224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-prunasin + H2O = D-glucose + mandelonitrile.","definition_xrefs":["RHEA:16489","EC:3.2.1.118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"prunasin beta-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R02558","MetaCyc:PRUNASIN-BETA-GLUCOSIDASE-RXN"],"synonyms":[{"name":"prunasin b-glucosidase activity","type":"exact"},{"name":"prunasin beta-D-glucohydrolase activity","type":"related"},{"name":"prunasin hydrolase activity","type":"related"}],"termid":"GO:0050224"}


id: MONDO:0013679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sclerosteosis in which the cause of the disease is a mutation in the LRP4 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosteosis","termid":"MONDO:0017838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosteosis 2","secondary_identifiers":["GARD:15786","OMIM:614305","UMLS:C3280402","DOID:0060757","MEDGEN:482032"],"synonyms":[{"name":"LRP4 sclerosteosis","type":"exact"},{"name":"SOST2","type":"exact"},{"name":"sclerosteosis 2","type":"exact"},{"name":"sclerosteosis caused by mutation in LRP4","type":"exact"},{"name":"sclerosteosis type 2","type":"exact"}],"termid":"MONDO:0013679","xrefs":{"Monarch":{"xref_id":"0013679"}}}


id: PR:Q10359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh3 gene.","definition_xrefs":["UniProtKB:Q10359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase gmh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.06c","synonyms":[{"name":"Spom972h-gmh3","type":"exact"}],"termid":"PR:Q10359"}


id: MONDO:0007892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lenz-Majewski hyperostotic dwarfism is an extremely rare syndrome associating dwarfism, characteristic facial appearance, cutis laxa and progressive bone sclerosis.","definition_xrefs":["Orphanet:2658"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lenz-Majewski hyperostotic dwarfism","secondary_identifiers":["icd11.foundation:1509425242","GARD:3223","MESH:C537115","DOID:0111507","OMIM:151050","MEDGEN:98483","UMLS:C0432269"],"synonyms":[{"name":"LMHD","type":"related"},{"name":"Lenz Majewski hyperostotic dwarfism","type":"related"},{"name":"Lenz-Majewski hyperostotic dwarfism","type":"exact"},{"name":"Lenz-Majewski hyperostotic dysplasia","type":"related"},{"name":"Lenz-Majewski syndrome","type":"related"},{"name":"hyperostotic dwarfism Lenz-Majewski type","type":"related"},{"name":"multiple congenital anomalies, intellectual disability and progressive skeletal sclerosis","type":"related"},{"name":"multiple congenital anomalies, mental retardation and progressive skeletal sclerosis","type":"related"}],"termid":"MONDO:0007892","xrefs":{"Monarch":{"xref_id":"0007892"}}}


id: GO:0090288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"negatively_regulates","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"}


id: GO:0102377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviol + UDP-alpha-D-glucose = H+ + steviolmonoside + UDP.","definition_xrefs":["RHEA:61732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"steviol 13-O glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13511"],"termid":"GO:0102377"}


id: PBO:0041135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 18","termid":"PBO:0041135"}


id: MONDO:0000593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune disease of skin and connective tissue (obsolete MONDO:0000593)","termid":"MONDO:0000593","xrefs":{"Monarch":{"xref_id":"0000593"}}}


id: PBO:0028111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_bis(5'-adenosyl)-hexaphosphatase_activity","termid":"PBO:0028111"}


id: PBO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 2","termid":"PBO:0044228"}


id: MONDO:0003460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of glandular structures which contain clear cells and a fibrotic stroma.","definition_xrefs":["NCIT:C8987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell adenofibroma","secondary_identifiers":["DOID:5477","ICDO:8313/0","MESH:D062625","MEDGEN:90762","NCIT:C8985","UMLS:C0334317"],"synonyms":[{"name":"clear cell adenofibroma","type":"exact"},{"name":"clear cell adenofibroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003460","xrefs":{"Monarch":{"xref_id":"0003460"}}}


id: PR:Q96VG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC683.03 gene.","definition_xrefs":["UniProtKB:Q96VG3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C683.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC683.03","synonyms":[{"name":"Spom972h-SPAC683.03","type":"exact"}],"termid":"PR:Q96VG3"}


id: PBO:0059103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORF4L2 antisense RNA 1","termid":"PBO:0059103"}


id: MONDO:0014658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of severe achondroplasia with developmental delay and acanthosis nigricans. It has been described in four unrelated individuals. Structural central nervous system anomalies, seizures and hearing loss were also reported, together with bowing of the clavicle, femur, tibia and fibula in some cases. The syndrome is caused by a Lys650Met substitution in the kinase domain of fibroblast growth factor receptor 3 (encoded by the FGFR3 gene; 4p16.3).","definition_xrefs":["Orphanet:85165"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with micromelia (obsolete MONDO:0018232)","termid":"MONDO:0018232"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"FGFR3-related chondrodysplasia","termid":"MONDO:0019685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"severe achondroplasia-developmental delay-acanthosis nigricans syndrome","secondary_identifiers":["ICD10CM:Q77.4","SCTID:699870002","ICD9:757.39","OMIM:616482","PMID:10053006","MEDGEN:393098","UMLS:C2674173","DOID:0111158","GARD:9443","ICD9:783.40"],"synonyms":[{"name":"SADDAN","type":"exact"},{"name":"SADDAN dysplasia","type":"exact"},{"name":"achondroplasia, severe, with developmental delay and acanthosis nigricans","type":"related"},{"name":"severe achondroplasia with developmental delay and acanthosis nigricans","type":"exact"}],"termid":"MONDO:0014658","xrefs":{"Monarch":{"xref_id":"0014658"}}}


id: GO:0051177
data:
  {"annotated_genes":["SJAG_03681","SJAG_04699","SJAG_04126","SJAG_03926","SJAG_01805","SJAG_01601","SJAG_03418","SJAG_00600","SJAG_03698","SJAG_01082","SJAG_03353","SJAG_04791","SJAG_04259","SJAG_00229","SJAG_03989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98783,103164,116194],"is_not":false,"summary":null,"term":"GO:0051177"},{"annotations":[112913,115035,92993,113632,100459,100980,112360,106980,98321,103673],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[116195,106981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010789"},{"annotations":[69820,90130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051754"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatids of a replicated chromosome are joined along the entire length of the chromosome during meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03353":null,"SJAG_03418":null,"SJAG_03681":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051177","terms_by_termid":{"GO:0010789":null,"GO:0051177":null,"GO:0051754":null,"GO:1990813":null}}


id: PBO:0087798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Syntaxin-like vacuolar t-SNARE; functions with Vam7p in vacuolar protein trafficking; mediates docking/fusion of late transport intermediates with the vacuole; has an acidic di-leucine sorting signal and C-terminal transmembrane region","termid":"PBO:0087798"}


id: GO:0042066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Glial cell growth that occurs in the perineurium, a cell layer that ensheaths projections of peripheral nerves, such as motor axons.","definition_xrefs":["GOC:mah","PMID:18176560","PMID:11517334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell growth","termid":"GO:0042065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perineurial glial growth","termid":"GO:0042066"}


id: SO:0001384
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A portion of a CDS that is not the complete CDS.","direct_ancestors":[{"relation_name":"has_quality","term_name":"fragmentary","termid":"SO:0000731"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_fragment","synonyms":[{"name":"CDS fragment","type":"exact"},{"name":"incomplete CDS","type":"exact"}],"termid":"SO:0001384"}


id: PBO:0027952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_pyridoxine_level","termid":"PBO:0027952"}


id: PBO:0087453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex with Ctf8p; shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint","termid":"PBO:0087453"}


id: MONDO:0019552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Centrifugal lipodystrophy is a rare, acquired, localized lipodistrophy characterized by single or, occasionally, multiple, centrifugally progressive, asymptomatic to sometimes mildly tender, hypopigmented, lipoatrophic skin depressions with weakly erymatheous inflammatory borders, typically associated with regional ipsilateral lymph nodes swelling. Lesions typically occur on lower trunk (in particular groin and abdomen region), followed by upper trunk (axilla and neighboring regions) and, rarely, neck and head. It is usually not associated with systemic disease and is typically self-resolving.","definition_xrefs":["Orphanet:90156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lipodystrophy","termid":"MONDO:0019194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"centrifugal lipodystrophy","secondary_identifiers":["GARD:19125","UMLS:C0406605","MEDGEN:590539","icd11.foundation:1561732835"],"synonyms":[{"name":"lipodystrophia centrifugalis abdominalis infantilis","type":"exact"}],"termid":"MONDO:0019552","xrefs":{"Monarch":{"xref_id":"0019552"}}}


id: MONDO:0013232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mseleni joint disease (MJD) is a rare and crippling chondrodysplasia, reported mainly in the Maputaland region in northern Kwazulu Natal, South Africa, characterized by a bilateral and uniform arthropathy of the joints that primarily and most severely affects the hip but that can also affect many other joints (i.e. knees, ankles, wrists, shoulders, elbows), and that manifests with pain and stiffness that progressively limits joint movement, eventually compromising a patient's ability to walk. Severe short staure and brachydactyly have been reported in a few patients with MJD.","definition_xrefs":["Orphanet:2619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachydactylous dwarfism, Mseleni type","secondary_identifiers":["UMLS:C2931420","icd11.foundation:419953164","MEDGEN:419408","MESH:C537086","GARD:960","SCTID:715470008","OMIM:613342"],"synonyms":[{"name":"Mseleni JOINT disease","type":"related"},{"name":"Mseleni joint disease","type":"exact"},{"name":"brachydactylous dwarfism Mseleni type","type":"related"},{"name":"brachydactylous dwarfs of Mseleni","type":"related"}],"termid":"MONDO:0013232","xrefs":{"Monarch":{"xref_id":"0013232"}}}


id: MONDO:0011083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trichodental syndrome is characterized by the association of fine, dry and short hair with dental anomalies. It has been described in less than 10 families. The mode of transmission is autosomal dominant.","definition_xrefs":["Orphanet:3351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichodental syndrome","secondary_identifiers":["MESH:C536551","OMIM:601453","icd11.foundation:944650339","MEDGEN:96068","SCTID:277810000","UMLS:C0406724","GARD:265"],"synonyms":[{"name":"TRICHODENTAL dysplasia","type":"related"},{"name":"Tricho-dental dysplasia","type":"related"},{"name":"Tricho-dental syndrome","type":"related"},{"name":"kersey syndrome","type":"exact"}],"termid":"MONDO:0011083","xrefs":{"Monarch":{"xref_id":"0011083"}}}


id: PBO:0045468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5","termid":"PBO:0045468"}


