# terms

id: PBO:0081286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 70 pseudogene 1","termid":"PBO:0081286"}


id: PBO:0089565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MIM complex subunit Mim2","termid":"PBO:0089565"}


id: PBO:0085804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; deletion mutant shows strong genetic interaction with cdc28-as1 mutant in the presence of 1-NM-PP1; DCV1 has a paralog, YOL019W, that arose from the whole genome duplication","termid":"PBO:0085804"}


id: GO:0045780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone resorption.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone resorption","termid":"GO:0045124"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"bone resorption","termid":"GO:0045453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone resorption","synonyms":[{"name":"activation of bone resorption","type":"narrow"},{"name":"stimulation of bone resorption","type":"narrow"},{"name":"up regulation of bone resorption","type":"exact"},{"name":"up-regulation of bone resorption","type":"exact"},{"name":"upregulation of bone resorption","type":"exact"}],"termid":"GO:0045780"}


id: PBO:0088685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP4 catalytic subunit Pph3","termid":"PBO:0088685"}


id: MONDO:0044701
data:
  {"annotated_genes":["SJAG_01712"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84491],"is_not":false,"summary":null,"term":"MONDO:0044701"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"childhood-onset motor and cognitive regression syndrome with extrapyramidal movement disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617672","UMLS:C4540086","DOID:0070474","GARD:13658","Orphanet:500180","MEDGEN:1626007"],"synonyms":[{"name":"CONDBA","type":"related"},{"name":"UBTF-related disorder","type":"exact"},{"name":"neurodegeneration, childhood-onset, with brain atrophy","type":"related"}],"termid":"MONDO:0044701","terms_by_termid":{"MONDO:0044701":null},"xrefs":{"Monarch":{"xref_id":"0044701"}}}


id: PBO:0005525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Prp45","termid":"PBO:0005525"}


id: PBO:0108695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein","termid":"PBO:0108695"}


id: PBO:0002671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPPDE peptidase family (predicted)","termid":"PBO:0002671"}


id: PBO:0080284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 47 pseudogene","termid":"PBO:0080284"}


id: MONDO:0800028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare paroxysmal movement disorder, with childhood or adolescent onset, characterized by paroxysmal choreiform, dystonic, and myoclonic movements involving the limbs (mostly distal upper limbs), neck and/or face, which can progressively increase in both frequency and severity until they become nearly constant. Patients may also present with delayed motor milestones, perioral and periorbital dyskinesias, dysarthria, hypotonia, and weakness.","definition_xrefs":["Orphanet:324588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"dyskinesia with orofacial involvement","termid":"MONDO:0031115"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyskinesia with orofacial involvement, autosomal dominant","secondary_identifiers":["UMLS:C5551343","MESH:C564676","ICD10CM:G51.4","MEDGEN:1790407","SCTID:763352005","GARD:12722","OMIM:606703"],"synonyms":[{"name":"ADCY5-related dyskinesia","type":"related"},{"name":"FDFM","type":"exact"},{"name":"dyskinesia, familial, with facial myokymia","type":"exact"}],"termid":"MONDO:0800028","xrefs":{"Monarch":{"xref_id":"0800028"}}}


id: PBO:0088825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex, CUE domain protein Cue1","termid":"PBO:0088825"}


id: MONDO:1010853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in which there is a buildup of glycogen due to a lack of the enzyme alpha-glucosidase in sheep.","definition_xrefs":["OMIA:000419-9940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease II, sheep","termid":"MONDO:1010853","xrefs":{"Monarch":{"xref_id":"1010853"}}}


id: PBO:0063075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPOLA divergent transcript","termid":"PBO:0063075"}


id: PATO:0000581
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000581 relative weight value (obsolete PATO:0000581)","termid":"PATO:0000581"}


id: GO:2001288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of caveolin-mediated endocytosis","termid":"GO:2001286"},{"relation_name":"positively_regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of caveolin-mediated endocytosis","synonyms":[{"name":"positive regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"positive regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"positive regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001288"}


id: FYPO:0001123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a spore is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore shape","termid":"FYPO:0002467"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"elongated spore","synonyms":[{"name":"long spores","type":"exact"}],"termid":"FYPO:0001123"}


id: PBO:0052479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 7A","termid":"PBO:0052479"}


id: GO:0003276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of a heart valve.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"heart valve morphogenesis","termid":"GO:0003179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in heart valve morphogenesis","synonyms":[{"name":"apoptosis involved in heart valve morphogenesis","type":"narrow"}],"termid":"GO:0003276"}


id: PR:O74776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial ribosome-associated GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome-associated GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.04c","secondary_identifiers":["UniProtKB:O74776"],"synonyms":[{"name":"SPBC25B2.04c","type":"related"},{"name":"Spom972h-MTG1","type":"exact"}],"termid":"PR:O74776"}


id: GO:1900356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of methanofuran metabolic process","termid":"GO:1900354"},{"relation_name":"positively_regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of methanofuran metabolic process","synonyms":[{"name":"activation of methanofuran metabolic process","type":"narrow"},{"name":"activation of methanofuran metabolism","type":"exact"},{"name":"positive regulation of methanofuran metabolism","type":"exact"},{"name":"up regulation of methanofuran metabolic process","type":"exact"},{"name":"up regulation of methanofuran metabolism","type":"exact"},{"name":"up-regulation of methanofuran metabolic process","type":"exact"},{"name":"up-regulation of methanofuran metabolism","type":"exact"},{"name":"upregulation of methanofuran metabolic process","type":"exact"},{"name":"upregulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900356"}


id: PBO:0003038
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amino Acid Transporter","termid":"PBO:0003038"}


id: MONDO:0010625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, X-linked, with deficiency of 115,000 Dalton surface glycoprotein","secondary_identifiers":["MESH:C564120","MEDGEN:326624","UMLS:C1839982","OMIM:308220"],"synonyms":[{"name":"Gpl115 deficiency","type":"related"},{"name":"immunodeficiency, X-linked, with deficiency of 115,000 Dalton surface glycoprotein","type":"exact"}],"termid":"MONDO:0010625","xrefs":{"Monarch":{"xref_id":"0010625"}}}


id: PBO:0039144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 2 pseudogene 1","termid":"PBO:0039144"}


id: MONDO:1012429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dysplasia and internal hydrocephalus, non-human animal","termid":"MONDO:1011887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia and internal hydrocephalus, cattle","secondary_identifiers":["OMIA:001663-9913"],"termid":"MONDO:1012429","xrefs":{"Monarch":{"xref_id":"1012429"}}}


id: MONDO:0009415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoglycemia, leucine-induced","secondary_identifiers":["OMIM:240800","SCTID:62151007","UMLS:C0271714","MEDGEN:82888","MESH:C537150","DOID:0112262"],"synonyms":[{"name":"LIH","type":"related"},{"name":"familial infantile hypoglycemia precipitated by leucine","type":"related"},{"name":"hypoglycemia leucine induced","type":"related"},{"name":"hypoglycemia leucine-induced","type":"related"},{"name":"hypoglycemia of infancy, leucine-sensitive","type":"exact"},{"name":"hypoglycemia, leucine-induced","type":"exact"},{"name":"leucine-sensitive hypoglycemia of infancy","type":"related"}],"termid":"MONDO:0009415","xrefs":{"Monarch":{"xref_id":"0009415"}}}


id: MONDO:0002465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the bronchioles characterized by swelling of the bronchioles and mucus accumulation. It is usually caused by the respiratory syncytial virus and affects children. Signs and symptoms include coughing, wheezing, and shortness of breath.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiolitis","secondary_identifiers":["DOID:2942","ICD9:466.19","MEDGEN:14235","SCTID:4120002","UMLS:C0006271","MESH:D001988","HP:0011950","NCIT:C39658"],"synonyms":[{"name":"RSV bronchiolitis","type":"narrow"},{"name":"bronchiolitis","type":"exact"},{"name":"bronchiolitis (disease)","type":"exact"},{"name":"viral bronchiolitis","type":"narrow"},{"name":"wheezy bronchitis","type":"exact"}],"termid":"MONDO:0002465","xrefs":{"Monarch":{"xref_id":"0002465"}}}


id: PR:O94368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.02c","synonyms":[{"name":"Spom972h-ppr1","type":"exact"}],"termid":"PR:O94368"}


id: PBO:0041994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC39 antisense RNA 1","termid":"PBO:0041994"}


id: MONDO:0700001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pulmonary complication of an underlying autoimmune disorder that is reported in association with systemic lupus erythematosus (SLE). Reduced lung volumes result in restrictive ventilatory defect and a preserved carbon monoxide transfer coefficient.","definition_xrefs":["PMID:24836585","PMID:21686610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shrinking lung syndrome","secondary_identifiers":["UMLS:C1960277","MEDGEN:743060"],"synonyms":[{"name":"SLS","type":"exact"},{"name":"shrinking of the lung","type":"broad"},{"name":"small lungs","type":"related"}],"termid":"MONDO:0700001","xrefs":{"Monarch":{"xref_id":"0700001"}}}


id: GO:0004139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.","definition_xrefs":["RHEA:12821","EC:4.1.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"deoxyribose-phosphate aldolase activity","secondary_identifiers":["KEGG_REACTION:R01066","MetaCyc:DEOXYRIBOSE-P-ALD-RXN","Reactome:R-HSA-6787321"],"synonyms":[{"name":"2-deoxy-D-ribose-5-phosphate acetaldehyde-lyase (D-glyceraldehyde-3-phosphate-forming)","type":"related"},{"name":"2-deoxy-D-ribose-5-phosphate acetaldehyde-lyase activity","type":"related"},{"name":"2-deoxyribose-5-phosphate aldolase activity","type":"related"},{"name":"deoxyriboaldolase activity","type":"related"},{"name":"deoxyribose-5-phosphate aldolase activity","type":"related"},{"name":"phosphodeoxyriboaldolase activity","type":"related"}],"termid":"GO:0004139"}


id: GO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur utilization","termid":"GO:0006792"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"positively_regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfur utilization","synonyms":[{"name":"activation of sulfur utilization","type":"narrow"},{"name":"positive regulation of sulphur utilization","type":"exact"},{"name":"stimulation of sulfur utilization","type":"narrow"},{"name":"up regulation of sulfur utilization","type":"exact"},{"name":"up-regulation of sulfur utilization","type":"exact"},{"name":"upregulation of sulfur utilization","type":"exact"}],"termid":"GO:0045883"}


id: GO:0036454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has growth factor activity.","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"growth factor complex","termid":"GO:0036454"}


id: MONDO:0019414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by Brain anomalies, severe mental Retardation, Ectodermal dysplasia, Skeletal deformities (vertebral anomalies, scoliosis, polydactyly), Ear/eye anomalies (maldevelopment, small optic nerves, low set and large ears with hearing loss) and Kidney dysplasia/hypoplasia (giving the acronym BRESEK syndrome).","definition_xrefs":["Orphanet:85284"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"IFAP syndrome 1, with or without BRESHECK syndrome","termid":"MONDO:0100213"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRESEK syndrome","secondary_identifiers":["MESH:C564519","GARD:16746","SCTID:717945001","UMLS:C3502469","MEDGEN:502868"],"synonyms":[{"name":"BRESHECK syndrome","type":"exact"}],"termid":"MONDO:0019414","xrefs":{"Monarch":{"xref_id":"0019414"}}}


id: PBO:0056538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylmalonyl-CoA epimerase","termid":"PBO:0056538"}


id: GO:0047975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine + phosphate = guanine + D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"guanosine phosphorylase activity","secondary_identifiers":["RHEA:13233","MetaCyc:RXN0-5199"],"synonyms":[{"name":"guanosine:phosphate D-ribosyltransferase activity","type":"related"},{"name":"guanosine:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047975"}


id: PBO:0052419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL1 intronic transcript 1","termid":"PBO:0052419"}


id: GO:0033271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of any phosphorylated myo-inositol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"myo-inositol phosphate transport","termid":"GO:0033271"}


id: PBO:0043623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol-O-methyltransferase","termid":"PBO:0043623"}


id: PBO:0046108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E family member 1B","termid":"PBO:0046108"}


id: PBO:0089068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L57","termid":"PBO:0089068"}


id: GO:0098616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2SeO4 => diphosphate + adenylylselenate.","definition_xrefs":["PMID:2537056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"selenate adenylyltransferase (ATP) activity","secondary_identifiers":["Reactome:R-HSA-2408525"],"termid":"GO:0098616"}


id: PBO:0004524
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.8","termid":"PBO:0004524"}


id: PBO:0064096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITX1 antisense RNA 1","termid":"PBO:0064096"}


id: MONDO:0015339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adult form of the peroxisomal disease X-linked adrenoleukodystrophy (X-ALD), characterized by spastic paraparesia and often associated with peripheral adrenal insufficiency in males. Both males and females can be affected with AMN.","definition_xrefs":["Orphanet:139399"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked cerebral adrenoleukodystrophy","termid":"MONDO:0010247"},{"relation_name":"is_a","term_name":"adrenoleukodystrophy","termid":"MONDO:0018544"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002039","MONDO:0005066","MONDO:0005559","MONDO:0019053"],"is_obsolete":false,"name":"adrenomyeloneuropathy","secondary_identifiers":["MEDGEN:315918","NANDO:1200168","NANDO:2201248","SCTID:65389002","UMLS:C1527231","GARD:10614","icd11.foundation:1214673956"],"synonyms":[{"name":"AMN","type":"exact"},{"name":"adrenomyeloneuropathy","type":"exact"}],"termid":"MONDO:0015339","xrefs":{"Monarch":{"xref_id":"0015339"}}}


id: MONDO:0010362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign form of phosphorylase kinase deficiency caused by variants in PHKA1, characterized by exercise intolerance, myalgia, muscle cramps, myoglobinuria, and progressive muscle weakness.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease IXd","secondary_identifiers":["MESH:C564485","NANDO:2201167","Orphanet:715","OMIM:300559","DOID:0111040","MEDGEN:335112","NANDO:1200830","UMLS:C1845151","GARD:3858"],"synonyms":[{"name":"GSD IXd","type":"exact"},{"name":"GSD Vb","type":"related"},{"name":"GSD due to muscle phosphorylase kinase deficiency","type":"exact"},{"name":"GSD type 9D","type":"exact"},{"name":"GSD type IXd","type":"exact"},{"name":"GSD9D","type":"exact"},{"name":"PHKA1 glycogen storage disease","type":"exact"},{"name":"PHKA1-related glycogen storage disease type IX","type":"exact"},{"name":"glycogen storage disease caused by mutation in PHKA1","type":"exact"},{"name":"glycogen storage disease due to muscle phosphorylase kinase deficiency","type":"exact"},{"name":"glycogen storage disease type 9D","type":"exact"},{"name":"glycogen storage disease type IXd","type":"exact"},{"name":"glycogen storage disease, type IXd","type":"related"},{"name":"glycogenosis due to muscle phosphorylase kinase deficiency","type":"exact"},{"name":"glycogenosis type 9D","type":"exact"},{"name":"glycogenosis type IXd","type":"exact"},{"name":"muscle glycogenosis, X-linked","type":"related"},{"name":"muscle glycogenosis, X-linked recessive","type":"exact"},{"name":"muscle phosphorylase kinase deficiency","type":"exact"},{"name":"muscular phosphorylase kinase deficiency","type":"related"}],"termid":"MONDO:0010362","xrefs":{"Monarch":{"xref_id":"0010362"}}}


id: GO:0052038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the directed movement of substances within the cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host intracellular transport","synonyms":[{"name":"modulation by symbiont of host intracellular transport","type":"broad"},{"name":"modulation of host intracellular trafficking","type":"exact"}],"termid":"GO:0052038"}


id: GO:0039015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in pronephros development","synonyms":[{"name":"cell proliferation involved in pronephric kidney development","type":"exact"}],"termid":"GO:0039015"}


id: PBO:0067183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 241, pseudogene","termid":"PBO:0067183"}


id: PBO:0042632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 7 pseudogene","termid":"PBO:0042632"}


id: GO:0048254
data:
  {"annotated_genes":["SJAG_00752","SJAG_05223"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97141,116800],"is_not":false,"summary":null,"term":"GO:0048254"}]},"cv_name":"biological_process","definition":"Any process in which small nucleolar RNA is transported to, or maintained in, a specific location.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"snoRNA localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of snoRNA localization","type":"exact"},{"name":"small nucleolar RNA localization","type":"exact"},{"name":"snoRNA localisation","type":"exact"}],"termid":"GO:0048254","terms_by_termid":{"GO:0048254":null}}


id: PBO:0029798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_thick,_misoriented_actin_cables","termid":"PBO:0029798"}


id: PBO:0083226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with verified gene UBP16/YPL072W; may interact with ribosome based on co-purification experiments","termid":"PBO:0083226"}


id: GO:0014807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somitogenesis.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somitogenesis","termid":"GO:0014807"}


id: GO:0015840
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071918"}]},"cv_name":"biological_process","definition":"The directed movement of urea into, out of or within the cell. Urea is the water-soluble compound H2N-CO-NH2.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"one-carbon compound transport","termid":"GO:0019755"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"urea transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015840","terms_by_termid":{"GO:0071918":null}}


id: SO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000008 gene_sensu_your_favorite_organism (obsolete SO:0000008)","termid":"SO:0000008"}


id: GO:1900683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumonisin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"fumonisin biosynthetic process","termid":"GO:1900541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of fumonisin biosynthetic process","synonyms":[{"name":"regulation of fumonisin anabolism","type":"exact"},{"name":"regulation of fumonisin biosynthesis","type":"exact"},{"name":"regulation of fumonisin formation","type":"exact"},{"name":"regulation of fumonisin synthesis","type":"exact"}],"termid":"GO:1900683"}


id: MONDO:0017122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic syndrome with corpus callosum agenesis/dysgenesis as a major feature (obsolete MONDO:0017122)","secondary_identifiers":["Orphanet:269573"],"termid":"MONDO:0017122","xrefs":{"Monarch":{"xref_id":"0017122"}}}


id: PBO:0028800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_mating-type_region_replication_fork_barrier","termid":"PBO:0028800"}


id: GO:0047624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 5'-tetraphosphate + H2O = ATP + phosphate.","definition_xrefs":["EC:3.6.1.14","MetaCyc:ADENOSINE-TETRAPHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"adenosine-tetraphosphatase activity","secondary_identifiers":["RHEA:24500"],"synonyms":[{"name":"adenosine-tetraphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0047624"}


id: PBO:0089706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex GTPase subunit Hbs1","termid":"PBO:0089706"}


id: GO:1901156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving neomycin.","definition_xrefs":["UniPathway:UPA00969","GOC:yaf","GOC:TermGenie","MetaCyc:PWY-7016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"neomycin metabolic process","synonyms":[{"name":"neomycin metabolism","type":"exact"}],"termid":"GO:1901156"}


id: MONDO:0017239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial progressive hyper- and hypopigmentation is a rare, genetic, skin pigmentation anomaly disorder characterized by progressive, diffuse, partly blotchy, hyperpigmented lesions that are intermixed with multiple café-au-lait spots, hypopigmented maculae and lentigines and are located on the face, neck, trunk and limbs, as well as, frequently, the palms, soles and oral mucosa. Dispigmentation pattern can range from well isolated café-au-lait/hypopigmented patches on a background of normal-appearing skin to confetti-like or mottled appearance.","definition_xrefs":["Orphanet:280628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation with or without hypopigmentation, familial progressive","termid":"MONDO:0007771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial progressive hyper- and hypopigmentation","secondary_identifiers":["UMLS:C4706423","MEDGEN:1643385","GARD:17298","icd11.foundation:1229773662"],"synonyms":[{"name":"FPHH","type":"exact"}],"termid":"MONDO:0017239","xrefs":{"Monarch":{"xref_id":"0017239"}}}


id: MONDO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign skin neoplasm composed of epithelial cells.","definition_xrefs":["NCIT:C7419"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acanthoma","secondary_identifiers":["MEDGEN:208851","MESH:D049309","HP:0025432","DOID:174","UMLS:C0846967"],"synonyms":[{"name":"acanthoma","type":"exact"},{"name":"acanthoma (disease)","type":"exact"}],"termid":"MONDO:0002093","xrefs":{"Monarch":{"xref_id":"0002093"}}}


id: PBO:0029131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_recombination","termid":"PBO:0029131"}


id: PBO:0027145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_plasma_membrane,_with_protein_mislocalized_to_cytoplasm,_during_vegetative_growth","termid":"PBO:0027145"}


id: GO:0140786
data:
  {"annotated_genes":["SJAG_03405"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111997],"is_not":false,"summary":null,"term":"GO:0140786"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of glutamine.","definition_xrefs":["PMID:34535752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140299"],"is_obsolete":false,"name":"glutamine sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutamine sensing activity","type":"exact"}],"termid":"GO:0140786","terms_by_termid":{"GO:0140786":null}}


id: GO:0008001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrinogen (obsolete GO:0008001)","synonyms":[{"name":"fibrinogen","type":"exact"}],"termid":"GO:0008001"}


id: MONDO:0010815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia tarda","termid":"MONDO:0019667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia tarda with characteristic facies","secondary_identifiers":["MESH:C564003","UMLS:C1838653","OMIM:600093","DOID:0112289","MEDGEN:325071"],"synonyms":[{"name":"spondyloepiphyseal dysplasia tarda with characteristic facies","type":"exact"}],"termid":"MONDO:0010815","xrefs":{"Monarch":{"xref_id":"0010815"}}}


id: FYPO:0007979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain interphase microtubule bundles with more microtubules than normal.","definition_xrefs":["PMID:15837798","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"increased number of microtubules per bundle during mitotic interphase","termid":"FYPO:0007979"}


id: PBO:0082024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyxin pseudogene 1","termid":"PBO:0082024"}


id: MONDO:0100142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection where individuals have respiratory frequency >30 breaths per minute, SpO2 ≤93% on room air at sea level, ratio of arterial partial pressure of oxygen to fraction of inspired oxygen (PaO2/FiO2) <300, or lung infiltrates >50%.","gene_count":0,"genotype_count":0,"name":"obsolete severe COVID-19 infection (obsolete MONDO:0100142)","secondary_identifiers":["DOID:0081013"],"termid":"MONDO:0100142","xrefs":{"Monarch":{"xref_id":"0100142"}}}


id: PBO:0066410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELT like 2","termid":"PBO:0066410"}


id: PBO:0042955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 9","termid":"PBO:0042955"}


id: GO:0007418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate.","definition_xrefs":["PMID:12075342","GOC:bf","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral midline development","termid":"GO:0007418"}


id: PBO:0087895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; activated by proteolytic processing in response to signals from the SPS sensor system for external amino acids; activates transcription of amino acid permease genes; STP2 has a paralog, STP1, that arose from the whole genome duplication","termid":"PBO:0087895"}


id: MONDO:0017738
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84455,84454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"lysosomal glycogen storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E74.0","MEDGEN:1842699","UMLS:C5681077","Orphanet:309337","GARD:21333"],"termid":"MONDO:0017738","terms_by_termid":{"MONDO:0009290":null},"xrefs":{"Monarch":{"xref_id":"0017738"}}}


id: MONDO:0032724
data:
  {"annotated_genes":["SJAG_03864"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85361],"is_not":false,"summary":null,"term":"MONDO:0032724"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03864":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112200","UMLS:C5193073","Orphanet:642085","GARD:16348","MEDGEN:1677378","OMIM:618395"],"synonyms":[{"name":"SEMDJL3","type":"exact"},{"name":"SPONDYLOEPIMETAPHYSEAL DYSPLASIA WITH JOINT LAXITY, TYPE 3","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, EXOC6b type","type":"exact"}],"termid":"MONDO:0032724","terms_by_termid":{"MONDO:0032724":null},"xrefs":{"Monarch":{"xref_id":"0032724"}}}


id: PR:Q9P7S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf4 gene.","definition_xrefs":["UniProtKB:Q9P7S4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.09","synonyms":[{"name":"Spom972h-taf4","type":"exact"},{"name":"TBP-associated factor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7S4"}


id: PBO:0053261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF antisense RNA 2","termid":"PBO:0053261"}


id: GO:0015307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + drug(in) = H+(in) + drug(out).","definition_xrefs":["TC:2.A.1.3.-","TC:2.A.1.2.-"],"gene_count":0,"genotype_count":0,"name":"obsolete drug:proton antiporter activity (obsolete GO:0015307)","synonyms":[{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"narrow"},{"name":"drug:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015307"}


id: PBO:0025540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-Q homolog Fta7","termid":"PBO:0025540"}


id: PBO:0087153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease; required for maturation of the RNA component of RNase MRP; functions redundantly with Rnh70p and Rex2p in processing of U5 snRNA and RNase P RNA; member of RNase D family of exonucleases","termid":"PBO:0087153"}


id: PBO:0057414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548o-2","termid":"PBO:0057414"}


id: GO:0102486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dCTP + 2 H2O = dCMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dCTP phosphohydrolase activity (obsolete GO:0102486)","termid":"GO:0102486"}


id: GO:0075269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of aecium development","termid":"GO:0075268"},{"relation_name":"positively_regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aecium development","termid":"GO:0075269"}


id: PBO:0083987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamyl-tRNA synthetase (GluRS); forms a complex with methionyl-tRNA synthetase (Mes1p) and Arc1p; complex formation increases the catalytic efficiency of both tRNA synthetases and ensures their correct localization to the cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0083987"}


id: GO:0080030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + methyl (indol-3-yl)acetate = (indol-3-yl)acetate + H+ + methanol.","definition_xrefs":["RHEA:32919","PMID:18467465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"methyl indole-3-acetate esterase activity","secondary_identifiers":["MetaCyc:RXN-10711"],"synonyms":[{"name":"MeIAA esterase activity","type":"exact"},{"name":"Methyl IAA esterase activity","type":"exact"},{"name":"indole-3-Acetic acid methyl ester esterase activity","type":"exact"}],"termid":"GO:0080030"}


id: MONDO:0859376
data:
  {"annotated_genes":["SJAG_02447","SJAG_02589"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86514,86515],"is_not":false,"summary":null,"term":"MONDO:0859376"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02447":null,"SJAG_02589":null},"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, congenital, 5, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1840908","UMLS:C5830272","OMIM:620241"],"termid":"MONDO:0859376","terms_by_termid":{"MONDO:0859376":null},"xrefs":{"Monarch":{"xref_id":"0859376"}}}


id: PBO:0045059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG1 antisense RNA 1","termid":"PBO:0045059"}


id: MOD:00361
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an S-adenosylmethionine and a four-iron four-sulfur cluster to tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide.","definition_xrefs":["PubMed:11222759","RESID:AA0356","PubMed:14704425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S-S-AdoMet)","type":"exact"},{"name":"tetra-mu3-sulfido(S-adenosylmethion-N,O-diyliron)tris(S-cysteinyliron)","type":"exact"},{"name":"tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00361"}


id: GO:0032094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat.","definition_xrefs":["GOC:add","ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to food","termid":"GO:0032094"}


id: GO:0099568
data:
  {"annotated_genes":["SJAG_03119","SJAG_00185","SJAG_02700","SJAG_02166","SJAG_00807","SJAG_04781","SJAG_01118","SJAG_00072","SJAG_00228","SJAG_03486","SJAG_01277","SJAG_03625","SJAG_02838","SJAG_03088","SJAG_00397","SJAG_03126","SJAG_00279","SJAG_04509","SJAG_00800","SJAG_04776","SJAG_02087","SJAG_04947","SJAG_00938","SJAG_00268","SJAG_01360","SJAG_00140","SJAG_04703","SJAG_02379","SJAG_01268","SJAG_03705","SJAG_03936","SJAG_04522","SJAG_03704","SJAG_01889","SJAG_00118","SJAG_02431","SJAG_00845","SJAG_03581","SJAG_03602","SJAG_01964","SJAG_01448","SJAG_03703","SJAG_04486","SJAG_02320","SJAG_00028","SJAG_01665","SJAG_04620","SJAG_04566","SJAG_04375","SJAG_00514","SJAG_00805","SJAG_01196","SJAG_03374","SJAG_04771","SJAG_01453","SJAG_00700","SJAG_05290","SJAG_03596","SJAG_02989","SJAG_01732","SJAG_04280","SJAG_01167","SJAG_00030","SJAG_04690","SJAG_00152","SJAG_02241","SJAG_04666","SJAG_02645","SJAG_02392","SJAG_03748","SJAG_04901","SJAG_02831","SJAG_01787","SJAG_03637","SJAG_01855","SJAG_03379","SJAG_00104","SJAG_02695","SJAG_04498","SJAG_03564","SJAG_01738","SJAG_02222","SJAG_03011","SJAG_04001","SJAG_01456","SJAG_00663","SJAG_01658","SJAG_04765","SJAG_04050","SJAG_00851","SJAG_00773","SJAG_03025","SJAG_05285","SJAG_00216","SJAG_02368","SJAG_02169","SJAG_00661","SJAG_01143","SJAG_00596","SJAG_03655","SJAG_04322","SJAG_01114","SJAG_04982","SJAG_04724","SJAG_02045","SJAG_01925","SJAG_03453","SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115134,97622,102661,98190],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"},{"annotations":[98027,110794,98929,89057,92754,115301,115610,93766,101818,102139,102663,113165,86742,96052,98170,106191,100111,109248,111433,95036,95497,96911,90269,89969,87088,87671,94393,87265,110000,117752,87359,103810,93051,106006,96162,102420,90578,112177,117024,99352,102868,107483,112207,89948,98507,99083,106167,94555,95461,90041,109892,110500,88537,113281,102919,86726,91099,111004,101838,105252,94603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051285"},{"annotations":[96391,109893,115302,115611,117753,113282,87089,111084,114939,117025,117949,91609,89949,105253,93767,112178,89058,89920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902716"},{"annotations":[100112,117026,111085,109894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140472"},{"annotations":[118467,118551,92557,118458,118460,118465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990753"},{"annotations":[115306,87097,108569,106764,103813,113287,95040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097575"},{"annotations":[103702,99274],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990463"},{"annotations":[91522,96913,91735,93774,97109,104303,107283,116159,111006,104504,109937,86748,109660,102426,117995,98512,109897,97085,97623,106766,91615,99089,102238,106045,98090,94561,115308,117758,100949,112182,116996,96837,87360,117016,101842,87676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031097"},{"annotations":[99295,97086,116997,100143,117759,97010,111905,103092,100950,107110],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036391"},{"annotations":[89926,104337,97624,91523,105361,98193,87482,97219,116998,100445,115135,93054,99881,116160,91781,95512,88162],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071341"}]},"cv_name":"cellular_component","definition":"Any (proper) part of the cytoplasm of a single cell of sufficient size to still be considered cytoplasm.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":108,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00072":null,"SJAG_00104":null,"SJAG_00118":null,"SJAG_00140":null,"SJAG_00152":null,"SJAG_00185":null,"SJAG_00216":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00397":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00663":null,"SJAG_00700":null,"SJAG_00773":null,"SJAG_00800":null,"SJAG_00805":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00938":null,"SJAG_01114":null,"SJAG_01118":null,"SJAG_01143":null,"SJAG_01167":null,"SJAG_01196":null,"SJAG_01268":null,"SJAG_01277":null,"SJAG_01360":null,"SJAG_01448":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01658":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01738":null,"SJAG_01787":null,"SJAG_01855":null,"SJAG_01889":null,"SJAG_01925":null,"SJAG_01964":null,"SJAG_02045":null,"SJAG_02087":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02645":null,"SJAG_02695":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03126":null,"SJAG_03374":null,"SJAG_03379":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03655":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03936":null,"SJAG_04001":null,"SJAG_04050":null,"SJAG_04280":null,"SJAG_04322":null,"SJAG_04375":null,"SJAG_04462":null,"SJAG_04486":null,"SJAG_04498":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04566":null,"SJAG_04620":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04703":null,"SJAG_04724":null,"SJAG_04765":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04781":null,"SJAG_04901":null,"SJAG_04947":null,"SJAG_04982":null,"SJAG_05285":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic region","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null},"termid":"GO:0099568","terms_by_termid":{"GO:0000085":null,"GO:0031097":null,"GO:0036391":null,"GO:0051285":null,"GO:0051325":null,"GO:0051329":null,"GO:0071341":null,"GO:0097575":null,"GO:0110115":null,"GO:0140472":null,"GO:1902716":null,"GO:1990463":null,"GO:1990753":null}}


id: GO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nematode pharynx are generated and organized.","definition_xrefs":["PMID:20805556","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx morphogenesis","termid":"GO:0110040"}


id: PBO:0065146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protamine 2","termid":"PBO:0065146"}


id: PR:O74984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.06c gene.","definition_xrefs":["UniProtKB:O74984","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein homolog C338.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.06c","synonyms":[{"name":"Spom972h-SPCC338.06c","type":"exact"}],"termid":"PR:O74984"}


id: PBO:0016518
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mkh1-Pek1-Pmk1 MAP kinase","termid":"PBO:0016518"}


id: SO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon that is disrupted by the insertion of another element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_transposon","synonyms":[{"name":"nested transposon","type":"exact"}],"termid":"SO:0001648"}


id: PBO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn12","termid":"PBO:0004859"}


id: PBO:0080543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 2","termid":"PBO:0080543"}


id: PBO:0090688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lysine-tRNA ligase Msk1","termid":"PBO:0090688"}


id: PBO:0085844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; YDR222W has a paralog, YLR225C, that arose from the whole genome duplication","termid":"PBO:0085844"}


id: PBO:0084323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin beta; responsible for import of the Toa1p-Toa2p complex into the nucleus; binds to nucleoporins Nup1p and Nup2p; may play a role in regulation of pleiotropic drug resistance","termid":"PBO:0084323"}


id: GO:0021533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation in hindbrain","termid":"GO:0021533"}


id: MONDO:0014249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mammary polyadenomatosis is characterized by the presence in both breasts of multiple voluminous fibroadenomas with heterogeneous echo patterns.","definition_xrefs":["Orphanet:50920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple fibroadenoma of the breast","secondary_identifiers":["OMIM:615554","UMLS:C3809918","MEDGEN:816248"],"synonyms":[{"name":"MFAB","type":"related"},{"name":"mammary polyadenomatosis","type":"exact"},{"name":"multiple fibroadenomas of the breast","type":"related"}],"termid":"MONDO:0014249","xrefs":{"Monarch":{"xref_id":"0014249"}}}


id: PBO:0012224
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RAD3","termid":"PBO:0012224"}


id: PBO:0055426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2856","termid":"PBO:0055426"}


id: PBO:0089209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, middle-meiotic Cuf2","termid":"PBO:0089209"}


id: MONDO:0013074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplastic syndrome characterized by the presence of unilateral lipomas of the cranium, face and neck, and ipsilateral cerebral malformations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"encephalocraniocutaneous lipomatosis","secondary_identifiers":["ICD9:757.8","MEDGEN:140807","Orphanet:2396","icd11.foundation:1084215843","SCTID:238905009","OMIM:613001","NCIT:C4701","GARD:2108","MESH:C535736","UMLS:C0406612"],"synonyms":[{"name":"ECCL","type":"exact"},{"name":"Fishman syndrome","type":"exact"},{"name":"Haberland syndrome","type":"exact"},{"name":"encephalocraniocutaneous lipomatosis","type":"exact"},{"name":"encephalocraniocutaneous lipomatosis, somatic mosaic","type":"exact"}],"termid":"MONDO:0013074","xrefs":{"Monarch":{"xref_id":"0013074"}}}


id: PBO:0060329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IG","termid":"PBO:0060329"}


id: GO:1990710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric mismatch repair complex involved in binding to and correcting insertion/deletion mutations.","definition_xrefs":["GOC:bhm","PMID:21666597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MutS complex","synonyms":[{"name":"MutS mismatch repair complex","type":"exact"}],"termid":"GO:1990710"}


id: GO:0031987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion involved in locomotory behavior","synonyms":[{"name":"locomotion during locomotory behaviour","type":"exact"}],"termid":"GO:0031987"}


id: PBO:0088295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyrimidine nucleotide Rim2","termid":"PBO:0088295"}


id: GO:0060265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of respiratory burst involved in inflammatory response","termid":"GO:0060264"},{"relation_name":"is_a","term_name":"positive regulation of respiratory burst","termid":"GO:0060267"},{"relation_name":"positively_regulates","term_name":"respiratory burst involved in inflammatory response","termid":"GO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of respiratory burst involved in inflammatory response","synonyms":[{"name":"positive regulation of respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0060265"}


id: PBO:0044598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 6","termid":"PBO:0044598"}


id: GO:0009453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates.","definition_xrefs":["PMID:11029423","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy taxis","synonyms":[{"name":"energytaxis","type":"exact"},{"name":"taxis in response to energy source","type":"exact"}],"termid":"GO:0009453"}


id: GO:0102580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + UDP-alpha-D-xylose = cyanidin 3-O-beta-D-sambubioside + UDP.","definition_xrefs":["EC:2.4.2.51","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity","secondary_identifiers":["RHEA:35443","MetaCyc:RXN-15326"],"termid":"GO:0102580"}


id: PBO:0081857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 790","termid":"PBO:0081857"}


id: GO:0036488
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of the transcription factor CHOP (GADD153) and a member of the C/EBP family of transcription factors.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:1547942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CHOP-C/EBP complex","synonyms":[{"name":"CHOP-C/EBP dimer","type":"exact"},{"name":"CHOP-C/EBP heterodimer","type":"exact"},{"name":"GADD153-C/EBP complex","type":"exact"},{"name":"GADD153-C/EBP-alpha complex","type":"narrow"}],"termid":"GO:0036488"}


id: FYPO:0006082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament depolymerization, i.e. the removal of actin monomers from an actin filament, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0030042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal actin filament depolymerization","synonyms":[{"name":"normal actin filament depolymerisation","type":"exact"},{"name":"normal actin filament depolymerization during mitotic cell cycle","type":"related"},{"name":"normal microtubule actin filament during vegetative growth","type":"exact"}],"termid":"FYPO:0006082"}


id: MONDO:0859365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, dysmorphic facies, and skeletal anomalies, with or without seizures","secondary_identifiers":["MEDGEN:1840880","UMLS:C5830244","OMIM:620224"],"termid":"MONDO:0859365","xrefs":{"Monarch":{"xref_id":"0859365"}}}


id: FYPO:0009024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing cysteine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0005447","FYPO:0002058","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on cysteine nitrogen source","synonyms":[{"name":"increased growth on cysteine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on cysteine nitrogen source","type":"exact"}],"termid":"FYPO:0009024"}


id: PBO:0059219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 2A","termid":"PBO:0059219"}


id: MONDO:0018366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucinous adenocarcinoma of ovary (obsolete MONDO:0018366)","termid":"MONDO:0018366","xrefs":{"Monarch":{"xref_id":"0018366"}}}


id: PBO:0059947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 33","termid":"PBO:0059947"}


id: PBO:0074950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-1","termid":"PBO:0074950"}


id: MONDO:0012432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CEP290 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with oculorenal defect","termid":"MONDO:0009480"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"},{"relation_name":"is_a","term_name":"CEP290-related ciliopathy","termid":"MONDO:0100451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0006025"],"is_obsolete":false,"name":"Joubert syndrome 5","secondary_identifiers":["GARD:15475","DOID:0111000","MESH:C537688","UMLS:C1857780","OMIM:610188","MEDGEN:347545"],"synonyms":[{"name":"CEP290 Joubert syndrome","type":"exact"},{"name":"JBTS5","type":"exact"},{"name":"Joubert syndrome 5","type":"exact"},{"name":"Joubert syndrome caused by mutation in CEP290","type":"exact"},{"name":"Joubert syndrome type 5","type":"exact"}],"termid":"MONDO:0012432","xrefs":{"Monarch":{"xref_id":"0012432"}}}


id: MONDO:0027675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chemotherapy-induced toxicity","termid":"MONDO:0800390"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irinotecan toxicity","secondary_identifiers":["Orphanet:240885"],"termid":"MONDO:0027675","xrefs":{"Monarch":{"xref_id":"0027675"}}}


id: MONDO:0006467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing primary carcinoma of the thyroid gland composed of malignant squamous cells. The clinical course is usually aggressive.","definition_xrefs":["NCIT:C46008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland squamous cell carcinoma","secondary_identifiers":["UMLS:C1710177","EFO:1000594","MEDGEN:328050"],"synonyms":[{"name":"squamous cell thyroid gland carcinoma","type":"exact"},{"name":"thyroid gland squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006467","xrefs":{"Monarch":{"xref_id":"0006467"}}}


id: MOD:01049
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-histidine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated histidine","synonyms":[{"name":"HalHis","type":"exact"}],"termid":"MOD:01049"}


id: PR:O74431
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cation-transporting ATPase 13A3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation-transporting ATPase C1672.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.11c","secondary_identifiers":["UniProtKB:O74431"],"synonyms":[{"name":"Spom972h-ATP13A3","type":"exact"}],"termid":"PR:O74431"}


id: MONDO:0017289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pleuropulmonary blastoma","termid":"MONDO:0011014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fetal lung interstitial tumor","secondary_identifiers":["MEDGEN:1830091","UMLS:C5679952","GARD:21118","Orphanet:284362"],"synonyms":[{"name":"FLIT","type":"exact"},{"name":"flit","type":"exact"},{"name":"immature interstitial mesenchymal tumor","type":"exact"},{"name":"immature interstitial mesenchymal tumour","type":"exact"}],"termid":"MONDO:0017289","xrefs":{"Monarch":{"xref_id":"0017289"}}}


id: MONDO:0025487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired defect of cellular immunity that occurs in mice infected with mouse leukemia viruses (Mulv). The syndrome shows striking similarities with human aids and is characterized by lymphadenopathy, profound immunosuppression, enhanced susceptibility to opportunistic infections, and B-cell lymphomas.","definition_xrefs":["MESH:D016183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rodent disease","termid":"MONDO:0024981"},{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"murine acquired immunodeficiency syndrome","synonyms":[{"name":"AIDS, murine","type":"related"},{"name":"MAIDS","type":"related"},{"name":"murine AIDS","type":"related"},{"name":"murine AIDSs","type":"related"},{"name":"murine acquired immune deficiency syndrome","type":"related"},{"name":"murine acquired immuno deficiency syndrome","type":"related"},{"name":"murine acquired immuno-deficiency syndrome","type":"related"}],"termid":"MONDO:0025487","xrefs":{"Monarch":{"xref_id":"0025487"}}}


id: PBO:0053298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 4","termid":"PBO:0053298"}


id: PATO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which starts later than the natural start time or the reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"onset quality","termid":"PATO:0002325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed","synonyms":[{"name":"late","type":"related"}],"termid":"PATO:0000502"}


id: GO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoteichoic acid.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lipoteichoic acid binding","termid":"GO:0070891"}


id: SO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A telomerase RNA gene is a non coding RNA gene the RNA product of which is a component of telomerase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase_RNA_gene","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Telomerase_RNA_component"],"synonyms":[{"name":"TERC","type":"exact"},{"name":"Telomerase RNA component","type":"exact"},{"name":"telomerase RNA gene","type":"exact"}],"termid":"SO:0001643"}


id: PBO:0050947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 21","termid":"PBO:0050947"}


id: MONDO:0016968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of chromosome 18","termid":"MONDO:0016936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of the long arm of chromosome 18","secondary_identifiers":["UMLS:C0809935","GARD:20888","Orphanet:262977","MEDGEN:167200","MESH:C538308"],"synonyms":[{"name":"18q duplication","type":"related"},{"name":"18q partial trisomy","type":"related"},{"name":"18q trisomy","type":"related"},{"name":"Duplication 18q","type":"related"},{"name":"chromosome 18q duplication","type":"related"},{"name":"partial duplication of chromosome 18q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 18","type":"exact"},{"name":"partial trisomy of chromosome 18q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome type 18","type":"exact"},{"name":"trisomy 18q","type":"related"}],"termid":"MONDO:0016968","xrefs":{"Monarch":{"xref_id":"0016968"}}}


id: FYPO:0003516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased L-ergothioneine level during vegetative growth","type":"exact"},{"name":"increased cellular L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003516"}


id: PBO:0082818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAD+ dependent histone deacetylase of the Sirtuin family; deacetylation targets are primarily nuclear proteins; required for telomere hypercluster formation in quiescent yeast cells; involved in regulation of lifespan; plays roles in silencing at HML, HMR, telomeres, and rDNA; negatively regulates initiation of DNA replication; functions as regulator of autophagy like mammalian homolog SIRT1, and also of mitophagy","termid":"PBO:0082818"}


id: GO:0090589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + trehalose (out) = protein cysteine + trehalose-6-phosphate (in).","definition_xrefs":["PMID:7608078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0022857","GO:0016740","GO:0005215"],"is_obsolete":false,"name":"protein-phosphocysteine-trehalose phosphotransferase system transporter activity","termid":"GO:0090589"}


id: GO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyterpenoid compounds, terpenoids with more than eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyterpenoid metabolic process","synonyms":[{"name":"polyterpene metabolic process","type":"narrow"},{"name":"polyterpene metabolism","type":"narrow"},{"name":"polyterpenoid metabolism","type":"exact"}],"termid":"GO:0016111"}


id: PBO:0050873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha","termid":"PBO:0050873"}


id: PBO:0058619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6751","termid":"PBO:0058619"}


id: SO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide modified by methylation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_DNA_base_feature","synonyms":[{"name":"methylated base feature","type":"exact"}],"termid":"SO:0000306"}


id: PBO:0071095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 97","termid":"PBO:0071095"}


id: PBO:0031601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_anaphase_progression","termid":"PBO:0031601"}


id: FYPO:0003145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in prophase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic prophase","synonyms":[{"name":"abnormal cell cycle arrest in mitotic prophase during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in prophase during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in prophase","type":"exact"}],"termid":"FYPO:0003145"}


id: MONDO:0009015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corneal dystrophy-perceptive deafness (CDPD) or Harboyan syndrome is a degenerative corneal disorder characterized by the association of congenital hereditary endothelial dystrophy (CHED) with progressive, postlingual sensorineural hearing loss.","definition_xrefs":["Orphanet:1490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal dystrophy-perceptive deafness syndrome","secondary_identifiers":["UMLS:C1857572","MEDGEN:387858","DOID:0111620","OMIM:217400","GARD:1529","MESH:C535473","SCTID:720749004"],"synonyms":[{"name":"CDPD","type":"exact"},{"name":"Cdpd1","type":"related"},{"name":"Harboyan syndrome","type":"exact"},{"name":"congenital corneal dystrophy, progressive sensorineural deafness","type":"related"},{"name":"corneal dystrophy and perceptive deafness","type":"related"},{"name":"corneal dystrophy and sensorineural deafness","type":"related"},{"name":"corneal dystrophy with progressive deafness","type":"exact"},{"name":"corneal endothelial dystrophy and perceptive deafness","type":"exact"}],"termid":"MONDO:0009015","xrefs":{"Monarch":{"xref_id":"0009015"}}}


id: MONDO:0006657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apparent mineralocorticoid excess syndrome (obsolete MONDO:0006657)","secondary_identifiers":["NANDO:2200362","NANDO:2100130"],"termid":"MONDO:0006657","xrefs":{"Monarch":{"xref_id":"0006657"}}}


id: PBO:0061319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A5","termid":"PBO:0061319"}


id: PBO:0011439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase [NAD(P)+] (predicted)","termid":"PBO:0011439"}


id: PBO:0053587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 612","termid":"PBO:0053587"}


id: MONDO:0033613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic quadriplegic cerebral palsy","termid":"MONDO:0016215"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities","secondary_identifiers":["OMIM:619026","GARD:10447","MEDGEN:1736667","Orphanet:641353","UMLS:C5436628","OMIM:603513","MESH:C567853"],"synonyms":[{"name":"CPSQ1","type":"related"},{"name":"NEDSWMA","type":"exact"},{"name":"cerebral palsy spastic quadriplegic","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 1","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, type 1","type":"exact"},{"name":"infantile neurodegeneration-progressive spasticity-intellectual disability-white matter lesions syndrome","type":"exact"}],"termid":"MONDO:0033613","xrefs":{"Monarch":{"xref_id":"0033613"}}}


id: PBO:0048531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 7","termid":"PBO:0048531"}


id: PBO:0083852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain an S1 RNA binding domain; human homolog EXOSC1 partially complements yeast csl4 null mutant, and can complement inviability of strain in which expression of CSL4 is repressed","termid":"PBO:0083852"}


id: PBO:0008072
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YPS1","termid":"PBO:0008072"}


id: PBO:0034626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_cell_separation_after_cytokinesis","termid":"PBO:0034626"}


id: PBO:0058494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5689","termid":"PBO:0058494"}


id: PBO:0041887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated auxiliary subunit beta","termid":"PBO:0041887"}


id: GO:0002775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of an antimicrobial peptide during an immune response, resulting in an increase in intracellular or extracellular levels. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["PMID:11807545","ISBN:0781735149","GOC:add","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"},{"relation_name":"part_of","term_name":"antimicrobial humoral immune response mediated by antimicrobial peptide","termid":"GO:0061844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antimicrobial peptide production","termid":"GO:0002775"}


id: PBO:0085840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOR342C has a paralog, YAL037W, that arose from the whole genome duplication","termid":"PBO:0085840"}


id: PBO:0077397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM132D antisense RNA 1","termid":"PBO:0077397"}


id: GO:0102248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 a 1,2-diacyl-sn-glycerol = a triacyl-sn-glycerol + a 2-monoglyceride.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete diacylglycerol transacylase activity (obsolete GO:0102248)","termid":"GO:0102248"}


id: PBO:0054426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1822","termid":"PBO:0054426"}


id: MOD:01701
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes a hydrogen cation, a proton, forming an anionic residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deprotonated residue","synonyms":[{"name":"H-NRes","type":"exact"}],"termid":"MOD:01701"}


id: PBO:0084586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR062W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCR061W","termid":"PBO:0084586"}


id: PBO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tert-butyl_hydroperoxide","termid":"PBO:0030378"}


id: PBO:0062784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORAI calcium release-activated calcium modulator 2","termid":"PBO:0062784"}


id: PBO:0076670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2C","termid":"PBO:0076670"}


id: PBO:0076376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1 (MAP3K7) binding protein 3","termid":"PBO:0076376"}


id: SO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An indel that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indel_artifact","synonyms":[{"name":"indel artifact","type":"exact"}],"termid":"SO:0002173"}


id: MONDO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent or recurrent inability to achieve or to maintain an erection during sexual activity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile disorder","termid":"MONDO:0002036"},{"relation_name":"is_a","term_name":"physiological sexual disorder","termid":"MONDO:0002134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erectile dysfunction","secondary_identifiers":["DOID:1875","EFO:0004234","HP:0000802","MEDGEN:66879","MESH:D007172","NCIT:C34801","SCTID:397803000","UMLS:C0242350"],"synonyms":[{"name":"dysfunction, erectile","type":"related"},{"name":"erectile dysfunction","type":"exact"},{"name":"erectile dysfunction (disease)","type":"exact"},{"name":"impotence","type":"related"},{"name":"impotence, male","type":"related"},{"name":"impotence, male sexual","type":"related"},{"name":"male erectile Disorder","type":"exact"},{"name":"male impotence","type":"related"},{"name":"male sexual impotence","type":"related"},{"name":"sexual impotence","type":"exact"},{"name":"sexual impotence (finding)","type":"exact"},{"name":"sexual impotence, Male","type":"related"}],"termid":"MONDO:0005362","xrefs":{"Monarch":{"xref_id":"0005362"}}}


id: MONDO:0850338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spinal cord ependymoma that is characterized by MYCN amplification.","definition_xrefs":["DOID:0080888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord ependymoma","termid":"MONDO:0003473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal ependymoma, MYCN-amplified","secondary_identifiers":["MEDGEN:1806198","UMLS:C5670583"],"termid":"MONDO:0850338","xrefs":{"Monarch":{"xref_id":"0850338"}}}


id: MONDO:0700046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Withdrawal syndrome involving the abrupt discontinuation of baclofen therapy (intrathecal or oral). Baclofen withdrawal syndrome can result in high fever, altered mental status (including agitation, insomnia, confusion, delusions, hallucinations, seizures, visual changes, or psychosis), and potentially profound muscular rigidity that sometimes progresses to fatal rhabdomyolysis.","definition_xrefs":["PMID:12048649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance withdrawal syndrome","termid":"MONDO:0005567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baclofen withdrawal syndrome","termid":"MONDO:0700046","xrefs":{"Monarch":{"xref_id":"0700046"}}}


id: PBO:0014268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, congenital disorders of glycosylation","termid":"PBO:0014268"}


id: PBO:0078444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining 2","termid":"PBO:0078444"}


id: PBO:0061374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 34","termid":"PBO:0061374"}


id: PBO:0004481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroceramide delta-4 desaturase","termid":"PBO:0004481"}


id: PBO:0030425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constricted_nucleus","termid":"PBO:0030425"}


id: GO:0102876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-marmesin + NADPH + H+ + O2 = psoralen + NADP + acetone + 2 H2O.","definition_xrefs":["EC:1.14.14.141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"psoralen synthase (NADPH) activity","secondary_identifiers":["RHEA:19281","MetaCyc:RXN-8386"],"termid":"GO:0102876"}


id: PBO:0030498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_DNA_damage_checkpoint_activation","termid":"PBO:0030498"}


id: PBO:0056003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2","termid":"PBO:0056003"}


id: PBO:0031366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_2-deoxyglucose","termid":"PBO:0031366"}


id: FYPO:0000530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle arrest that normally occurs in response to pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal response to pheromone","termid":"FYPO:0000302"},{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"abnormal pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: abnormal","type":"related"}],"termid":"FYPO:0000530"}


id: PBO:0050712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPB1 associated protein 1","termid":"PBO:0050712"}


id: PR:Q9C0X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.14c gene.","definition_xrefs":["UniProtKB:Q9C0X4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12C2.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.14c","synonyms":[{"name":"Spom972h-SPBC12C2.14c","type":"exact"}],"termid":"PR:Q9C0X4"}


id: PBO:0049338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 3","termid":"PBO:0049338"}


id: PBO:0028950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_eisosome","termid":"PBO:0028950"}


id: FYPO:0003277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more microtubules does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitosis","synonyms":[{"name":"abolished protein localisation to microtubule during mitosis","type":"exact"},{"name":"abolished protein localization to microtubule during mitosis during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule during mitotic M phase","type":"related"},{"name":"abolished protein localization to microtubule during mitotic nuclear division","type":"exact"},{"name":"protein absent from microtubule during mitosis","type":"related"},{"name":"protein localization to microtubule abolished during mitosis","type":"exact"}],"termid":"FYPO:0003277"}


id: PBO:0068759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 4, pseudogene","termid":"PBO:0068759"}


id: PBO:0044771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 53","termid":"PBO:0044771"}


id: GO:0015734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of taurine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate transmembrane transport","termid":"GO:0042918"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"taurine transmembrane transport","synonyms":[{"name":"taurine transport","type":"broad"}],"termid":"GO:0015734"}


id: GO:0010544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"negative regulation of blood coagulation","termid":"GO:0030195"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"negatively_regulates","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet activation","termid":"GO:0010544"}


id: PR:O74444
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug122 gene.","definition_xrefs":["UniProtKB:O74444","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 122 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.15","synonyms":[{"name":"Spom972h-mug122","type":"exact"}],"termid":"PR:O74444"}


id: FYPO:0006462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal at the silent mating-type cassette during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at silent mating-type cassette during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at silent mating-type cassette during first meiotic nuclear division","type":"exact"},{"name":"increased histone H2A phosphorylation at silent mating-type region during meiosis I","type":"exact"}],"termid":"FYPO:0006462"}


id: PBO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 like 3'-5' exoribonuclease 2","termid":"PBO:0045030"}


id: PR:P87122
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A12.06c gene.","definition_xrefs":["UniProtKB:P87122","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation exchanger C3A12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.06c","synonyms":[{"name":"Spom972h-SPAC3A12.06c","type":"exact"}],"termid":"PR:P87122"}


id: PBO:0036444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex subunit Hbs1 (predicted)","termid":"PBO:0036444"}


id: MONDO:0054764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 8","secondary_identifiers":["MEDGEN:1645224","OMIM:617917","UMLS:C4693587"],"synonyms":[{"name":"NBIA8","type":"related"},{"name":"neurodegeneration with brain iron accumulation 8","type":"exact"}],"termid":"MONDO:0054764","xrefs":{"Monarch":{"xref_id":"0054764"}}}


id: PBO:0003130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug184","termid":"PBO:0003130"}


id: GO:0009923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetrameric complex of four different subunits which catalyzes the elongation of a fatty acid chain 2 carbon units at a time in the synthesis of very long chain fatty acids.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005789","GO:0032991","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"fatty acid elongase complex","termid":"GO:0009923"}


id: PBO:0044146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitobiase","termid":"PBO:0044146"}


id: PBO:0044452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 31, pseudogene","termid":"PBO:0044452"}


id: GO:0023065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via blood.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via blood (obsolete GO:0023065)","synonyms":[{"name":"signal transmission via blood","type":"exact"}],"termid":"GO:0023065"}


id: PR:Q9P7S8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23G3.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rax1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.05c","synonyms":[{"name":"Spom972h-SPAC23G3.05c","type":"exact"}],"termid":"PR:Q9P7S8"}


id: GO:0075190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont hyphopodium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of hyphopodium formation","termid":"GO:0075188"},{"relation_name":"negatively_regulates","term_name":"hyphopodium formation","termid":"GO:0075187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hyphopodium formation","synonyms":[{"name":"negative regulation of hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075190"}


id: PBO:0084383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity glucose transporter of the major facilitator superfamily; expression is induced in low or high glucose conditions; HXT3 has a paralog, HXT5, that arose from the whole genome duplication","termid":"PBO:0084383"}


id: MONDO:1012069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dystrophic epidermolysis bullosa, non-human animal","termid":"MONDO:1011737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic epidermolysis bullosa, domestic cat","secondary_identifiers":["OMIA:000341-9685"],"termid":"MONDO:1012069","xrefs":{"Monarch":{"xref_id":"1012069"}}}


id: PATO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's ability of being turned, bowed, or twisted without breaking.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flexibility","termid":"PATO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flexible","synonyms":[{"name":"bendy","type":"exact"}],"termid":"PATO:0001544"}


id: PBO:0070179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 94 pseudogene","termid":"PBO:0070179"}


id: PBO:0084797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein kinase; involved in negative regulation of pyruvate dehydrogenase complex activity by phosphorylating the ser-133 residue of the Pda1p subunit; acts in concert with kinase Pkp2p and phosphatases Ptc5p and Ptc6p","termid":"PBO:0084797"}


id: PBO:0083393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF CDC15/YAR019C","termid":"PBO:0083393"}


id: GO:0046298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4-dichlorobenzoate metabolic process","termid":"GO:0018898"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"2,4-dichlorobenzoate catabolic process","synonyms":[{"name":"2,4-dichlorobenzoate breakdown","type":"exact"},{"name":"2,4-dichlorobenzoate catabolism","type":"exact"},{"name":"2,4-dichlorobenzoate degradation","type":"exact"}],"termid":"GO:0046298"}


id: MONDO:0033658
data:
  {"annotated_genes":["SJAG_04960"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84988],"is_not":false,"summary":null,"term":"MONDO:0033658"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures and brain atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619072","MEDGEN:1748227","GARD:18531","UMLS:C5436732"],"synonyms":[{"name":"NEDSEBA","type":"exact"}],"termid":"MONDO:0033658","terms_by_termid":{"MONDO:0033658":null},"xrefs":{"Monarch":{"xref_id":"0033658"}}}


id: GO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adenylate cyclase-inhibiting adrenergic receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["PMID:10571541","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0086096)","synonyms":[{"name":"G-inhibitory-coupled Beta2AR signaling pathway involved in heart process","type":"exact"},{"name":"Gi-coupled Beta2-AR signaling pathway involved in heart process","type":"exact"},{"name":"Gi-coupled adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"cardiac adrenergic receptor signaling pathway via inhibition of adenylate cyclase activity","type":"exact"}],"termid":"GO:0086096"}


id: MONDO:0019647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital megacalycosis","termid":"MONDO:0019639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital bilateral megacalycosis","secondary_identifiers":["MEDGEN:1842447","UMLS:C5681455","GARD:19180","Orphanet:93177"],"termid":"MONDO:0019647","xrefs":{"Monarch":{"xref_id":"0019647"}}}


id: GO:1902348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a strigolactone stimulus.","definition_xrefs":["PMID:23893171","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to strigolactone","termid":"GO:1902347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to strigolactone","synonyms":[{"name":"cellular response to strigolactone analog GR24","type":"related"}],"termid":"GO:1902348"}


id: GO:0060094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycinergic synaptic transmission. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dph","GOC:dms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glycinergic","termid":"GO:0060092"},{"relation_name":"positively_regulates","term_name":"synaptic transmission, glycinergic","termid":"GO:0060012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic transmission, glycinergic","synonyms":[{"name":"positive regulation of glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060094"}


id: PBO:0090300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Cwf7","termid":"PBO:0090300"}


id: GO:0098665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of serotonin receptor activity.","definition_xrefs":["GOC:TermGenie","PMID:16116092","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"serotonin receptor complex","synonyms":[{"name":"5-HT receptor complex","type":"exact"},{"name":"5-hydroxytryptamine receptor complex","type":"exact"},{"name":"5HT receptor complex","type":"exact"}],"termid":"GO:0098665"}


id: PBO:0075714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 3","termid":"PBO:0075714"}


id: GO:0102198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-idonate + NAD+ = 5-dehydro-D-gluconate + NADH + H+.","definition_xrefs":["GOC:pz","RHEA:21172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-idonate 5-dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-12107","EC:1.1.1.366"],"synonyms":[{"name":"L-idonate 5-dehydrogenase activity (NAD-dependent)","type":"exact"}],"termid":"GO:0102198"}


id: PBO:0045184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B5","termid":"PBO:0045184"}


id: PBO:0060752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 2","termid":"PBO:0060752"}


id: PBO:0081568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 493","termid":"PBO:0081568"}


id: GO:2000500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of induction of apoptosis in response to chemical stimulus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of induction of apoptosis in response to chemical stimulus (obsolete GO:2000500)","synonyms":[{"name":"positive regulation of induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"positive regulation of induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:2000500"}


id: PR:Q9UU79
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein NSA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12642:SF0","PRO:DNx","OMA:SCHPO05060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.08","secondary_identifiers":["UniProtKB:Q9UU79"],"synonyms":[{"name":"Spom972h-NSA2","type":"exact"}],"termid":"PR:Q9UU79"}


id: PBO:0051527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor antagonist","termid":"PBO:0051527"}


id: GO:1990008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large cytoplasmic membrane-bounded vesicle with an electron dense granular core, up to 150-200 nm in diameter, found in neurosecretory cells in the hypothalamus.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao2031592629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granular vesicle","termid":"GO:1990005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"neurosecretory vesicle","termid":"GO:1990008"}


id: PBO:0058448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5087","termid":"PBO:0058448"}


id: PBO:0083014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box RNA helicase; involved in the second catalytic step of splicing and in exon ligation; exhibits ATP-dependent RNA unwinding activity; mediates the release of Yju2p and Cwc25p in the second step; in the absence of ATP, stabilizes the binding of Cwc25p to the spliceosome in the first catalytic step; missense mutation in human ortholog DHX38 associated with early-onset retinitis pigmentosa","termid":"PBO:0083014"}


id: PR:Q7Z9I2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YciK that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04765","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C663.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.09c","secondary_identifiers":["UniProtKB:Q7Z9I2"],"synonyms":[{"name":"Spom972h-yciK","type":"exact"}],"termid":"PR:Q7Z9I2"}


id: PATO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000368 towards1 (obsolete PATO:0000368)","termid":"PATO:0000368"}


id: PR:000050518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-189 of the amino acid sequence represented by UniProtKB:O74536. Example: UniProtKB:O74536, Thr-189, MOD:00047.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:22375066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","termid":"PR:000050516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssp2/UnPhos:(T189)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: SNF1-like protein kinase ssp2 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ssp2/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74536, Thr-189, PR:000026291","type":"narrow"},{"name":"ssp2/UnPhos:(T189)","type":"exact"}],"termid":"PR:000050518"}


id: PBO:0074594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 7B","termid":"PBO:0074594"}


id: PATO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000148 body temperature (obsolete PATO:0000148)","termid":"PATO:0000148"}


id: PBO:0088905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane CoA pyrophosphatase (FIT) family lipid storage protein Fit1","termid":"PBO:0088905"}


id: PBO:0109093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPO11 initiator of meiotic double strand breaks","termid":"PBO:0109093"}


id: PR:000050517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Thr-189 of the amino acid sequence represented by UniProtKB:O74536. Example: UniProtKB:O74536, Thr-189, MOD:00047.","definition_xrefs":["PRO:DAN","PMID:22375066","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","termid":"PR:000050516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssp2/Phos(T189)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: SNF1-like protein kinase ssp2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ssp2/Phos:1","type":"exact"},{"name":"UniProtKB:O74536, Thr-189, MOD:00047","type":"narrow"},{"name":"ssp2/Phos(T189)","type":"exact"}],"termid":"PR:000050517"}


id: PBO:0077146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triokinase and FMN cyclase","termid":"PBO:0077146"}


id: PBO:0041905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene","termid":"PBO:0041905"}


id: MONDO:0019956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammatory process affecting the brain parenchyma. Causes include viral infections and less frequently bacterial infections, toxins, and immune-mediated processes.","definition_xrefs":["NCIT:C26760"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalitis","secondary_identifiers":["ICD10CM:A85","ICD9:323.8","ICD9:323.9","Orphanet:97275","SCTID:45170000","MEDGEN:4027","UMLS:C0014038","MESH:D004660","MedDRA:10014581","ICD9:323.0","DOID:9588"],"synonyms":[{"name":"brain inflammation","type":"broad"}],"termid":"MONDO:0019956","xrefs":{"Monarch":{"xref_id":"0019956"}}}


id: GO:0098503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing a 3' phosphate group from a DNA molecule.","definition_xrefs":["GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA 3' dephosphorylation (obsolete GO:0098503)","termid":"GO:0098503"}


id: PBO:0081711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 630","termid":"PBO:0081711"}


id: PBO:0003237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-induced protein Uvi15","termid":"PBO:0003237"}


id: MOD:01683
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-lysine residue with one methyl group.","definition_xrefs":["OMSSA:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-lysine","synonyms":[{"name":"Me1Lys","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"methylk","type":"exact"}],"termid":"MOD:01683"}


id: FYPO:0004477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to calcium ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to calcium ion","synonyms":[{"name":"decreased RNA accumulation during cellular response to calcium ion","type":"related"},{"name":"decreased RNA level during cellular response to calcium","type":"exact"},{"name":"decreased RNA level during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to calcium ion","type":"exact"},{"name":"reduced RNA level during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0004477"}


id: PBO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visits","termid":"PBO:0034188"}


id: PBO:0084853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; MRPL7 produces both YmL5 and YmL7, which are two different modified forms of the same protein","termid":"PBO:0084853"}


id: PBO:0090573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim9","termid":"PBO:0090573"}


id: GO:0008546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Physical interaction between microtubules and chromatin via DNA binding proteins.","definition_xrefs":["PMID:10322137"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule/chromatin interaction (obsolete GO:0008546)","synonyms":[{"name":"microtubule/chromatin interaction","type":"exact"}],"termid":"GO:0008546"}


id: PBO:0082454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methyl sterol oxidase; catalyzes the first of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants accumulate the sterol intermediate 4,4-dimethylzymosterol; human MSMO1 functionally complements the growth defect caused by repression of ERG25 expression","termid":"PBO:0082454"}


id: GO:0039649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host ubiquitin-protein ligase activity. Ubiquitin-protein ligase activity catalyzes the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.","definition_xrefs":["UniProtKB-KW:KW-1123"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host ubiquitin-protein ligase activity (obsolete GO:0039649)","synonyms":[{"name":"modulation of host E3 ubiquitin ligases by virus","type":"narrow"}],"termid":"GO:0039649"}


id: GO:0006024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan biosynthetic process","synonyms":[{"name":"glycosaminoglycan anabolism","type":"exact"},{"name":"glycosaminoglycan biosynthesis","type":"exact"},{"name":"glycosaminoglycan formation","type":"exact"},{"name":"glycosaminoglycan synthesis","type":"exact"}],"termid":"GO:0006024"}


id: PBO:0060930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 1","termid":"PBO:0060930"}


id: PBO:0004451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 protease Nep1","termid":"PBO:0004451"}


id: MONDO:0800287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 14b","secondary_identifiers":["UMLS:C3553408","MEDGEN:766322"],"synonyms":[{"name":"AUTS14B","type":"exact"}],"termid":"MONDO:0800287","xrefs":{"Monarch":{"xref_id":"0800287"}}}


id: MONDO:0003817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peritoneal serous papillary adenocarcinoma (obsolete MONDO:0003817)","termid":"MONDO:0003817","xrefs":{"Monarch":{"xref_id":"0003817"}}}


id: GO:0070068
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains VAMP4, syntaxin 6, syntaxin 16, and Vti1a (or orthologs thereof).","definition_xrefs":["PMID:11839770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"VAMP4-syntaxin-6-syntaxin-16-Vti1a complex","synonyms":[{"name":"SNARE complex (Vamp4, Stx6, Stx16, Vti1a)","type":"narrow"},{"name":"Vamp4-Stx6-Stx16-Vti1a complex","type":"related"}],"termid":"GO:0070068"}


id: MONDO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypersensitivity pneumonitis caused by the repeated exposure and inhalation of biological dust (such as hay dust, mold spores, or other agricultural products). It is considered a type II hypersensitivity inflammatory reaction. In the acute phase, signs and symptoms include fever, chills, cough, dyspnea, headache, and chest tightness. The subacute phase manifests as chronic cough, dyspnea, anorexia, and weight loss. The chronic phase results from the prolonged exposure to the antigen and is characterized by severe dyspnea and irreversible damage to the lungs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"},{"relation_name":"is_a","term_name":"occupational lung disease","termid":"MONDO:0022736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"farmer's lung disease","secondary_identifiers":["Orphanet:99906","SCTID:18690003","icd11.foundation:666590509","MEDGEN:8785","NCIT:C34605","GARD:6427","MedDRA:10016221","ICD9:495.0","DOID:14453","UMLS:C0015634"],"synonyms":[{"name":"Farmers lung","type":"exact"},{"name":"farmer lung","type":"exact"},{"name":"farmer's lung","type":"exact"}],"termid":"MONDO:0001971","xrefs":{"Monarch":{"xref_id":"0001971"}}}


id: GO:0120115
data:
  {"annotated_genes":["SJAG_01327","SJAG_03460","SJAG_02469","SJAG_01819","SJAG_05240","SJAG_03070","SJAG_03954"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95012,105498,107681,112011,114061,114996,115534],"is_not":false,"summary":null,"term":"GO:0120115"}]},"cv_name":"cellular_component","definition":"A heteroheptameric, nuclear protein complex composed of Lsm2, Lsm3, Lsm4, Lsm5, Lsm6, Lsm7, and Lsm8, or orthologs thereof, that selectively binds to snRNAs, in particular U6 or U6atac snRNAs, and also to unspliced transcripts localized within the nucleus.","definition_xrefs":["GOC:krc","PMID:28768202","PMID:27627834","GOC:bhm","PMID:23221597","PMID:19121818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Lsm2-8 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120115","terms_by_termid":{"GO:0120115":null}}


id: PBO:0027222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved,_elongated,_swollen_vegetative_cell","termid":"PBO:0027222"}


id: PBO:0003541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Nog1 (predicted)","termid":"PBO:0003541"}


id: PBO:0051548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 7 receptor","termid":"PBO:0051548"}


id: GO:0031563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of the mating projection in unicellular fungi exposed to mating pheromone.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"mating projection tip polarisome","termid":"GO:0031563"}


id: PBO:0030305
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_activation_of_monopolar_cell_growth","termid":"PBO:0030305"}


id: MONDO:0008582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypodontia-nail dysplasia syndrome is a form of ectodermal dysplasia.","definition_xrefs":["Orphanet:2228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tooth and nail syndrome","secondary_identifiers":["GARD:5587","DOID:6678","OMIM:189500","UMLS:C0406735","MESH:C536736","NORD:1777","MEDGEN:140809","NCIT:C40553","SCTID:400036004"],"synonyms":[{"name":"HND","type":"exact"},{"name":"TNS","type":"related"},{"name":"WITKOP syndrome","type":"related"},{"name":"Witkop syndrome","type":"exact"},{"name":"Witkop's syndrome","type":"exact"},{"name":"dysplasia of nails with hypodontia","type":"related"},{"name":"ectodermal dysplasia 3, Tooth/nail type","type":"related"},{"name":"ectodermal dysplasia 3, Witkop type","type":"related"},{"name":"hypodontia - dysplasia of nails","type":"related"},{"name":"hypodontia and nail dysplasia","type":"exact"},{"name":"hypodontia with nail dysplasia","type":"exact"},{"name":"hypodontia-dysplasia of nails syndrome","type":"related"},{"name":"hypodontia-nail dysgenesis syndrome","type":"exact"},{"name":"hypodontia-nail dysplasia","type":"exact"},{"name":"hypoplastic enamel-onycholysis-hypohidrosis syndrome","type":"exact"},{"name":"nail dysplasia with hypodontia","type":"related"},{"name":"tooth and nail syndrome","type":"exact"},{"name":"tooth-and-nail syndrome","type":"related"}],"termid":"MONDO:0008582","xrefs":{"Monarch":{"xref_id":"0008582"}}}


id: PBO:0062662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 3 pseudogene","termid":"PBO:0062662"}


id: MONDO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chondrodysplasia (obsolete MONDO:0000011)","termid":"MONDO:0000011","xrefs":{"Monarch":{"xref_id":"0000011"}}}


id: GO:0005728
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Circular DNA molecules encoding ribosomal RNA that are replicated independently of chromosomal replication. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats.","definition_xrefs":["PMID:12044934","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrachromosomal circular DNA","termid":"GO:0005727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal rDNA circle","synonyms":[{"name":"extrachromosomal ribosomal DNA circle","type":"exact"}],"termid":"GO:0005728"}


id: PBO:0059365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B","termid":"PBO:0059365"}


id: MONDO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of defective gonadal development in patients with a wide spectrum of chromosomal mosaic variants. Their karyotypes are of partial sex chromosome monosomy resulting from an absence or an abnormal second sex chromosome (X or Y). Karyotypes include 45,X/46,xx; 45,X/46,xx/47,xxx; 46,xxp-; 45,X/46,xy; 45,X/47,xyy; 46,xypi; etc. The spectrum of phenotypes may range from phenotypic female to phenotypic male including variations in gonads and internal and external genitalia, depending on the ratio in each gonad of 45,X primordial germ cells to those with normal 46,xx or 46,xy constitution.","definition_xrefs":["MESH:D006060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Turner syndrome","termid":"MONDO:0019499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"mixed gonadal dysgenesis","secondary_identifiers":["DOID:14449","UMLS:C0018055","MEDGEN:6654","NANDO:2200388","SCTID:83579008","GARD:2539"],"synonyms":[{"name":"gonadal dysgenesis mixed","type":"related"}],"termid":"MONDO:0001969","xrefs":{"Monarch":{"xref_id":"0001969"}}}


id: GO:0007124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cells grow as a chain of physically attached, elongated cells in response to an environmental stimulus or stimuli.","definition_xrefs":["PMID:19347739","GOC:krc","PMID:24710476","PMID:11104818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"},{"relation_name":"is_a","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudohyphal growth","termid":"GO:0007124"}


id: GO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-12 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-12 receptor activity","synonyms":[{"name":"IL-12 receptor activity","type":"exact"},{"name":"IL-12R","type":"exact"}],"termid":"GO:0016517"}


id: FYPO:0002777
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the sumoylation of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein sumoylation during vegetative growth","synonyms":[{"name":"abnormal protein sumolation during vegetative growth","type":"exact"},{"name":"abnormal protein sumoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002777"}


id: PBO:0077642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenascin C","termid":"PBO:0077642"}


id: MONDO:1010881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in sheep due to a mutation in the CLN6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, sheep","termid":"MONDO:1011578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN6-related, sheep","secondary_identifiers":["OMIA:001443-9940"],"synonyms":[{"name":"CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 6, sheep","type":"related"}],"termid":"MONDO:1010881","xrefs":{"Monarch":{"xref_id":"1010881"}}}


id: MONDO:0800112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of asthma that isn't related to an allergy trigger like pollen or dust, and is less common than atopic asthma.","definition_xrefs":["PMID:23724224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-atopic asthma","synonyms":[{"name":"non-allergic asthma","type":"exact"}],"termid":"MONDO:0800112","xrefs":{"Monarch":{"xref_id":"0800112"}}}


id: MONDO:0015295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intractable diarrhea-choanal atresia-eye anomalies syndrome is characterized by the association of intractable diarrhea of infancy with choanal atresia. Short stature, a prominent and broad nasal bridge, micrognathia, single palmar creases, chronic corneal inflammation, cytopenia, and abnormal hair texture were also reported. So far, the syndrome has been described in three children from the same family. The absence of intellectual deficit and immune deficiency allow this syndrome to be distinguished from other forms of intractable diarrhea of infancy described previously.","definition_xrefs":["Orphanet:137622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intractable diarrhea-choanal atresia-eye anomalies syndrome","secondary_identifiers":["GARD:19882","UMLS:C4304307","MEDGEN:929976"],"termid":"MONDO:0015295","xrefs":{"Monarch":{"xref_id":"0015295"}}}


id: PBO:0064131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase inhibitor gamma","termid":"PBO:0064131"}


id: FYPO:0002190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid vegetative cell","termid":"FYPO:0000945"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable spheroid vegetative cell","termid":"FYPO:0002482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable swollen spheroid vegetative cell","synonyms":[{"name":"inviable enlarged spheroid vegetative cell","type":"related"},{"name":"inviable enlarged volume spheroid vegetative cell","type":"exact"},{"name":"inviable large spheroid vegetative cell","type":"related"},{"name":"inviable swollen rounded vegetative cell","type":"exact"},{"name":"inviable swollen spheroid cell during vegetative growth","type":"exact"},{"name":"inviable swollen spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, increased spheroid vegetative cell size","type":"related"},{"name":"inviable, increased spheroid vegetative cell volume","type":"exact"},{"name":"lethal; swollen spheroid vegetative cell","type":"exact"}],"termid":"FYPO:0002190"}


id: GO:0160205
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106538],"is_not":false,"summary":null,"term":"GO:0160205"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [ADP-thiazole synthase]-L-cysteine + glycine + NAD(+) = [ADP-thiazole synthase]-dehydroalanine + ADP-5-ethyl-4-methylthiazole-2-carboxylate + 2 H(+) + 3 H2O + nicotinamide.","definition_xrefs":["RHEA:55708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"cysteine-dependent adenosine diphosphate thiazole synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.2.60"],"synonyms":[{"name":"ADP-thiazole synthase activity","type":"related"},{"name":"suicide thiamine thiazole synthase activity","type":"exact"}],"termid":"GO:0160205","terms_by_termid":{"GO:0160205":null}}


id: PBO:0027684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_curved,_elongated_cell","termid":"PBO:0027684"}


id: PBO:0068415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanylyltransferase and 5'-phosphatase pseudogene 1","termid":"PBO:0068415"}


id: MONDO:0015709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency syndrome with autoimmunity (obsolete MONDO:0015709)","secondary_identifiers":["Orphanet:169355","icd11.foundation:1902856995"],"termid":"MONDO:0015709","xrefs":{"Monarch":{"xref_id":"0015709"}}}


id: PBO:0048217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 1","termid":"PBO:0048217"}


id: MONDO:0013209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metabolic dysfunction-associated steatotic liver disease (MASLD, formerly known as nonalcoholic fatty liver disease or NAFLD) is a type of liver disease that is not caused by alcohol. It typically does not cause symptoms in the early stages, but it can cause health problems due to fat accumulation, inflammation, and scarring in the liver.","direct_ancestors":[{"relation_name":"is_a","term_name":"fatty liver disease","termid":"MONDO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"metabolic dysfunction-associated steatotic liver disease","secondary_identifiers":["SCTID:197315008","EFO:0003095","DOID:0080208","MEDGEN:96033","MESH:D065626","NCIT:C84444","Orphanet:33271","UMLS:C0400966","DOID:0080546","ICD9:571.8","MedDRA:10029530"],"synonyms":[{"name":"MASLD","type":"exact"},{"name":"NAFLD","type":"exact"},{"name":"NAFLD - nonalcoholic fatty liver disease","type":"exact"},{"name":"NAFLD1","type":"related"},{"name":"fatty liver disease, nonalcoholic","type":"exact"},{"name":"fatty liver disease, nonalcoholic, susceptibility to, 1","type":"related"},{"name":"liver disease, alcoholic, susceptibility to, 1","type":"related"},{"name":"non-alcoholic fatty liver","type":"exact"},{"name":"non-alcoholic fatty liver disease","type":"exact"},{"name":"nonalcoholic fatty liver disease","type":"exact"}],"termid":"MONDO:0013209","xrefs":{"Monarch":{"xref_id":"0013209"}}}


id: MONDO:0043723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fracture in the proximal half of the shaft of the ulna, with dislocation of the head of the radius.","definition_xrefs":["MESH:D009011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ulna fracture","termid":"MONDO:0005322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monteggia's fracture","secondary_identifiers":["SCTID:123973009"],"synonyms":[{"name":"Monteggia fracture","type":"related"},{"name":"Monteggias fracture","type":"related"},{"name":"fracture, Monteggia's","type":"related"},{"name":"monteggia fracture","type":"related"},{"name":"monteggia fracture dislocation","type":"related"},{"name":"monteggia's dislocation","type":"related"},{"name":"monteggia's fracture","type":"exact"}],"termid":"MONDO:0043723","xrefs":{"Monarch":{"xref_id":"0043723"}}}


id: PBO:0065889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB36, member RAS oncogene family","termid":"PBO:0065889"}


id: PBO:0049455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1","termid":"PBO:0049455"}


id: GO:0071328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a maltose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to maltose","termid":"GO:0034286"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to maltose stimulus","termid":"GO:0071328"}


id: PBO:0028103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_galactose_carbon_source","termid":"PBO:0028103"}


id: PBO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor 2C2 associated protein","termid":"PBO:0061438"}


id: PR:P87313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malignant T cell-amplified sequence 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22798:SF0","PRO:DNx","OMA:SCHPO03852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery-associated protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.12","secondary_identifiers":["UniProtKB:P87313"],"synonyms":[{"name":"Spom972h-MCTS1","type":"exact"}],"termid":"PR:P87313"}


id: PBO:0011500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF953 thioredoxin family protein","termid":"PBO:0011500"}


id: PBO:0054337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1730","termid":"PBO:0054337"}


id: GO:0009087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"methionine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine breakdown","type":"exact"},{"name":"methionine catabolism","type":"exact"},{"name":"methionine degradation","type":"exact"}],"termid":"GO:0009087"}


id: MONDO:0008329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal pseudohypoaldosteronism type 1 (renal PHA1) is a mild form of primary mineralocorticoid resistance restricted to the kidney.","definition_xrefs":["Orphanet:171871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 1","termid":"MONDO:0019161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"autosomal dominant pseudohypoaldosteronism type 1","secondary_identifiers":["GARD:9145","UMLS:C1449842","OMIM:177735","NCIT:C126810","MEDGEN:260623","DOID:0060855"],"synonyms":[{"name":"PHA I, autosomal dominant","type":"related"},{"name":"PHA1A","type":"exact"},{"name":"autosomal dominant PHA 1","type":"exact"},{"name":"autosomal dominant pseudohypoaldosteronism type 1","type":"exact"},{"name":"pseudohypoaldosteronism type 1 autosomal dominant","type":"related"},{"name":"pseudohypoaldosteronism type 1, dominant","type":"related"},{"name":"pseudohypoaldosteronism type i, autosomal dominant","type":"exact"},{"name":"pseudohypoaldosteronism, type I, autosomal dominant","type":"related"},{"name":"renal PHA1","type":"related"},{"name":"renal pseudohypoaldosteronism type 1","type":"related"}],"termid":"MONDO:0008329","xrefs":{"Monarch":{"xref_id":"0008329"}}}


id: PR:Q9P7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gad8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom972h-gad8","type":"exact"}],"termid":"PR:Q9P7J8"}


id: GO:1904977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a lymphatic endothelial cell from one site to another in the wall of a lymphatic vessel.","definition_xrefs":["GOC:TermGenie","GO_REF:0000091","PMID:25745057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"},{"relation_name":"part_of","term_name":"lymph vessel morphogenesis","termid":"GO:0036303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphatic endothelial cell migration","termid":"GO:1904977"}


id: GO:0047667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + thymidine = adenosine + thymidine 5'-phosphate.","definition_xrefs":["EC:2.7.1.114","MetaCyc:AMP--THYMIDINE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"AMP-thymidine kinase activity","secondary_identifiers":["RHEA:14913"],"synonyms":[{"name":"AMP:dThd kinase activity","type":"related"},{"name":"AMP:deoxythymidine 5'-phosphotransferase activity","type":"related"},{"name":"AMP:deoxythymidine kinase activity","type":"related"},{"name":"AMP:thymidine 5'-phosphotransferase activity","type":"related"},{"name":"adenylate-nucleoside phosphotransferase activity","type":"related"},{"name":"adenylic acid:deoxythymidine 5'-phosphotransferase activity","type":"related"},{"name":"thymidine phosphotransferase activity","type":"related"}],"termid":"GO:0047667"}


id: PBO:0068576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 27, pseudogene","termid":"PBO:0068576"}


id: GO:1901600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving strigolactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"strigolactone metabolic process","synonyms":[{"name":"strigolactone metabolism","type":"exact"}],"termid":"GO:1901600"}


id: GO:1990529
data:
  {"annotated_genes":["SJAG_03801","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102217,115268],"is_not":false,"summary":null,"term":"GO:1990529"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the transfer of the four mannoses in the GPI-anchor precursor. In yeast S. cerevisiae this complex consists of Pbn1p and Gpi14p and in rat this complex consists of PIG-X and PIG-M.","definition_xrefs":["GOC:rb","PMID:15635094","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03115":null,"SJAG_03801":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-mannosyltransferase I complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I complex","type":"related"}],"termid":"GO:1990529","terms_by_termid":{"GO:1990529":null}}


id: PBO:0055345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2773","termid":"PBO:0055345"}


id: PBO:0068399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 216 pseudogene 1","termid":"PBO:0068399"}


id: GO:0141102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethylaminomethyluridine34 in tRNA(Leu) + S-adenosyl-L-methionine = 5-carboxymethylaminomethyl-2'-O-methyluridine34 in tRNA(Leu) + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:43088","PMID:20855540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140101","GO:0003824","GO:0140098","GO:0016741"],"is_obsolete":false,"name":"tRNA (5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase activity","synonyms":[{"name":"tRNA (cytidine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase activity","type":"exact"}],"termid":"GO:0141102"}


id: MONDO:0004055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute inflammation of lacrimal passage","secondary_identifiers":["DOID:6970","SCTID:302900006","UMLS:C0339129","ICD9:375.3","MEDGEN:572973"],"termid":"MONDO:0004055","xrefs":{"Monarch":{"xref_id":"0004055"}}}


id: PBO:0073150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24B antisense RNA 1","termid":"PBO:0073150"}


id: PBO:0082421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional triacylglycerol lipase and LPA acyltransferase; lipid particle-localized triacylglycerol (TAG) lipase involved in triacylglycerol mobilization; catalyzes acylation of lysophosphatidic acid (LPA); potential Cdc28p substrate; TGL5 has a paralog, TGL4, that arose from the whole genome duplication","termid":"PBO:0082421"}


id: PBO:0042080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 148","termid":"PBO:0042080"}


id: MONDO:1010655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycythemia, non-human animal","termid":"MONDO:1010078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycythemia, llama","secondary_identifiers":["OMIA:000809-9844"],"termid":"MONDO:1010655","xrefs":{"Monarch":{"xref_id":"1010655"}}}


id: PBO:0002865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR56 (predicted)","termid":"PBO:0002865"}


id: MONDO:0013622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited bleeding disorder, platelet-type in which the cause of the disease is a mutation in the ITGA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 9","secondary_identifiers":["OMIM:614200","GARD:16868","Orphanet:98886","UMLS:C3280114","MEDGEN:481744","DOID:0111045","MESH:C566000"],"synonyms":[{"name":"BDPLT9","type":"exact"},{"name":"GP Ia deficiency","type":"exact"},{"name":"ITGA2 inherited bleeding disorder, platelet-type","type":"exact"},{"name":"bleeding diathesis due to integrin alpha2-beta1 deficiency","type":"related"},{"name":"bleeding disorder, platelet-type, 9","type":"related"},{"name":"collagen platelet receptor deficiency","type":"exact"},{"name":"glycoprotein Ia deficiency","type":"exact"},{"name":"inherited bleeding disorder, platelet-type caused by mutation in ITGA2","type":"exact"}],"termid":"MONDO:0013622","xrefs":{"Monarch":{"xref_id":"0013622"}}}


id: PBO:0073089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex iron sulfur subunit B","termid":"PBO:0073089"}


id: MONDO:0700005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characteristic in which the disease has an uncertain or unknown cause.","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic vs non-idiopathic","termid":"MONDO:0700004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic","secondary_identifiers":["icd11.foundation:894194405"],"termid":"MONDO:0700005","xrefs":{"Monarch":{"xref_id":"0700005"}}}


id: SO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variable gene that rearranges at the DNA level and codes the variable region of the variable domain of an Immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_V_gene","synonyms":[{"name":"IGV_gene","type":"exact"},{"name":"IG_variable_gene","type":"exact"},{"name":"Immunoglobulin_variable_gene","type":"exact"}],"termid":"SO:0002126"}


id: MONDO:0958234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bethlem myopathy","termid":"MONDO:0008029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"Bethlem myopathy 1C","secondary_identifiers":["OMIM:620726"],"termid":"MONDO:0958234","xrefs":{"Monarch":{"xref_id":"0958234"}}}


id: PBO:0064637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-platelet basic protein","termid":"PBO:0064637"}


id: GO:0042673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"},{"relation_name":"regulates","term_name":"retinal cone cell fate specification","termid":"GO:0042672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cone cell fate specification","termid":"GO:0042673"}


id: PBO:0081255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 25","termid":"PBO:0081255"}


id: GO:0032459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of protein oligomerization","termid":"GO:0032459"}


id: FYPO:0005502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription is abnormal in extent, timing, start or termination site, etc. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transcription","synonyms":[{"name":"abnormal transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0005502"}


id: GO:0008379
data:
  {"annotated_genes":["SJAG_00141","SJAG_03166","SJAG_01199","SJAG_02515","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69633,94392,104205,107985,116507],"is_not":false,"summary":null,"term":"GO:0008379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [thioredoxin]-dithiol + hydrogen peroxide = [thioredoxin]-disulfide + H2O.","definition_xrefs":["RHEA:63528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioredoxin-dependent peroxiredoxin activity","termid":"GO:0140824"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051920"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0051920","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thioredoxin peroxidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3322995","GO:0009031","Reactome:R-HSA-3341343","Reactome:R-HSA-3697894","Reactome:R-HSA-3697882","MetaCyc:RXN0-267"],"synonyms":[{"name":"TPx activity","type":"exact"},{"name":"TrxPx activity","type":"exact"},{"name":"thiol peroxidase activity","type":"exact"}],"termid":"GO:0008379","terms_by_termid":{"GO:0008379":null}}


id: PBO:0063029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAIP1 pseudogene 1","termid":"PBO:0063029"}


id: GO:1903982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases the length of a microvillus.","definition_xrefs":["GOC:als","PMID:22114352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microvillus length","synonyms":[{"name":"down regulation of regulation of microvillus length","type":"exact"},{"name":"down-regulation of regulation of microvillus length","type":"exact"},{"name":"downregulation of regulation of microvillus length","type":"exact"},{"name":"inhibition of regulation of microvillus length","type":"narrow"}],"termid":"GO:1903982"}


id: PBO:0074783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 4B","termid":"PBO:0074783"}


id: GO:0098737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a plasma membrane. Incorporation in this context means having some part or covalently attached group that is inserted into the the hydrophobic region of one or both bilayers.","definition_xrefs":["GOC:DOS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"protein insertion into plasma membrane","termid":"GO:0098737"}


id: MONDO:1011404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metabolic syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"},{"relation_name":"is_a","term_name":"nutritional disorder, non-human animal","termid":"MONDO:1011338"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic syndrome, non-human animal","secondary_identifiers":["OMIA:001898"],"termid":"MONDO:1011404","xrefs":{"Monarch":{"xref_id":"1011404"}}}


id: PBO:0059743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 17","termid":"PBO:0059743"}


id: PBO:0059158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase domain containing 2","termid":"PBO:0059158"}


id: PBO:0086570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPL261C is not an essential gene; partially overlaps verified ORF YPL260W","termid":"PBO:0086570"}


id: PBO:0072782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAE1 pseudogene 1","termid":"PBO:0072782"}


id: PBO:0070629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 13","termid":"PBO:0070629"}


id: PR:Q9UT18
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi9 gene.","definition_xrefs":["UniProtKB:Q9UT18","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transporter thi9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.10","synonyms":[{"name":"Spom972h-thi9","type":"exact"}],"termid":"PR:Q9UT18"}


id: GO:0002913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of lymphocyte anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of lymphocyte anergy","termid":"GO:0002911"},{"relation_name":"positively_regulates","term_name":"lymphocyte anergy","termid":"GO:0002249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte anergy","synonyms":[{"name":"activation of lymphocyte anergy","type":"narrow"},{"name":"stimulation of lymphocyte anergy","type":"narrow"},{"name":"up regulation of lymphocyte anergy","type":"exact"},{"name":"up-regulation of lymphocyte anergy","type":"exact"},{"name":"upregulation of lymphocyte anergy","type":"exact"}],"termid":"GO:0002913"}


id: GO:0051513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"regulates","term_name":"monopolar cell growth","termid":"GO:0042814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monopolar cell growth","termid":"GO:0051513"}


id: GO:0061362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000115"},{"relation_name":"is_a","term_name":"negative regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000750"},{"relation_name":"negatively_regulates","term_name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061362"}


id: PBO:0003973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit Taf10","termid":"PBO:0003973"}


id: GO:1990924
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The lipid bilayer surrounding the amphisome and separating its contents from the cell cytoplasm.","definition_xrefs":["GOC:bhm","PMID:17984323"],"gene_count":0,"genotype_count":0,"name":"obsolete amphisome membrane (obsolete GO:1990924)","synonyms":[{"name":"amphisomal membrane","type":"exact"}],"termid":"GO:1990924"}


id: PBO:0113434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor; component of the U4/U6-U5 snRNP complex; homologous to human PRPF31 and used to study retinitis pigmentosa","termid":"PBO:0113434"}


id: PBO:0090540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal mitochondrial NADH dehydrogenase (ubiquinone) Ndi1","termid":"PBO:0090540"}


id: PBO:0079654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 2","termid":"PBO:0079654"}


id: GO:0072393
data:
  {"annotated_genes":["SJAG_01613","SJAG_03116","SJAG_01546","SJAG_03835","SJAG_03062"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[108177,102226,95965,98419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a microtubule organizing center.","definition_xrefs":["GOC:BHF","PMID:19825938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring","termid":"GO:0034453"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"microtubule anchoring at microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule anchoring at MTOC","type":"exact"},{"name":"microtubule anchoring at microtubule organising centre","type":"exact"}],"termid":"GO:0072393","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: GO:0061129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-2. DIF-2 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061121"},{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061129"}


id: GO:0047493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + ceramide = CMP + H+ + sphingomyelin.","definition_xrefs":["RHEA:16273","EC:2.7.8.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016780","GO:0003674"],"is_obsolete":false,"name":"ceramide cholinephosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R01891","MetaCyc:CERAMIDE-CHOLINEPHOSPHOTRANSFERASE-RXN"],"synonyms":[{"name":"CDP-choline:N-acylsphingosine cholinephosphotransferase activity","type":"related"},{"name":"phosphorylcholine-ceramide transferase activity","type":"related"}],"termid":"GO:0047493"}


id: GO:0006175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009216"},{"relation_name":"is_a","term_name":"dATP metabolic process","termid":"GO:0046060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dATP biosynthetic process","synonyms":[{"name":"dATP anabolism","type":"exact"},{"name":"dATP biosynthesis","type":"exact"},{"name":"dATP formation","type":"exact"},{"name":"dATP synthesis","type":"exact"}],"termid":"GO:0006175"}


id: MONDO:0018165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Venous thoracic outlet syndrome (VTOS) is a form of thoracic outlet syndrome (TOS) that manifests as unilateral (rarely bilateral) arm pain and cyanosis.","definition_xrefs":["Orphanet:357131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic outlet syndrome","termid":"MONDO:0005979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"venous thoracic outlet syndrome","secondary_identifiers":["MEDGEN:408326","GARD:21536","SCTID:25981000119102","UMLS:C1956396"],"synonyms":[{"name":"Paget-Schrotter disease","type":"exact"},{"name":"VTOS","type":"exact"},{"name":"Venous TOS","type":"exact"},{"name":"Venous cervical rib syndrome","type":"exact"},{"name":"Venous costoclavicular syndrome","type":"exact"},{"name":"Venous hyperabduction syndrome","type":"exact"},{"name":"Venous scalenus anticus syndrome","type":"exact"},{"name":"Venous thoracic outlet compression syndrome","type":"exact"},{"name":"effort subclavian vein thrombosis","type":"exact"}],"termid":"MONDO:0018165","xrefs":{"Monarch":{"xref_id":"0018165"}}}


id: GO:0005975
data:
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id: MONDO:0022448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyoplasia mandibulofacial dysostosis (obsolete MONDO:0022448)","termid":"MONDO:0022448","xrefs":{"Monarch":{"xref_id":"0022448"}}}


id: GO:1901556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a candesartan stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to candesartan","termid":"GO:1901556"}


id: GO:1905646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of FACT complex assembly.","definition_xrefs":["PMID:20889714","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of FACT complex assembly","termid":"GO:1905644"},{"relation_name":"positively_regulates","term_name":"FACT complex assembly","termid":"GO:1905635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of FACT complex assembly","synonyms":[{"name":"activation of FACT complex assembly","type":"narrow"},{"name":"activation of FACT complex formation","type":"narrow"},{"name":"activation of Facilitates chromatin transcription complex assembly","type":"narrow"},{"name":"activation of Facilitates chromatin transcription complex formation","type":"narrow"},{"name":"positive regulation of FACT complex formation","type":"exact"},{"name":"positive regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"positive regulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"up regulation of FACT complex assembly","type":"exact"},{"name":"up regulation of FACT complex formation","type":"exact"},{"name":"up regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"up regulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"up-regulation of FACT complex assembly","type":"exact"},{"name":"up-regulation of FACT complex formation","type":"exact"},{"name":"up-regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"up-regulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"upregulation of FACT complex assembly","type":"exact"},{"name":"upregulation of FACT complex formation","type":"exact"},{"name":"upregulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"upregulation of Facilitates chromatin transcription complex formation","type":"exact"}],"termid":"GO:1905646"}


id: GO:0032702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-19 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-19 production","termid":"GO:0032662"},{"relation_name":"negatively_regulates","term_name":"interleukin-19 production","termid":"GO:0032622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-19 production","secondary_identifiers":["GO:0045385"],"synonyms":[{"name":"down regulation of interleukin-19 production","type":"exact"},{"name":"down-regulation of interleukin-19 production","type":"exact"},{"name":"downregulation of interleukin-19 production","type":"exact"},{"name":"inhibition of interleukin-19 production","type":"narrow"},{"name":"negative regulation of IL-19 production","type":"exact"},{"name":"negative regulation of interleukin-19 biosynthetic process","type":"narrow"}],"termid":"GO:0032702"}


id: GO:0044875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-glutamyl cysteine + hercynine + O2 = gamma-glutamyl-hercynyl cysteine sulfoxide + H2O.","definition_xrefs":["GOC:jl","PMID:24828577","RHEA:42672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gamma-glutamyl hercynylcysteine sulfoxide synthase activity","secondary_identifiers":["EC:1.14.99.50"],"synonyms":[{"name":"gamma-glutamyl hercynylcysteine S-oxide synthase","type":"exact"},{"name":"gamma-glutamyl hercynylcysteine sulfoxide synthase","type":"exact"}],"termid":"GO:0044875"}


id: MONDO:0958299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A round cell sarcoma with EWSR1-non-ETS fusion that is characterized by the presence of EWSR1-NFATC2 gene fusion.","definition_xrefs":["DOID:0081408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"round cell sarcoma with EWSR1-non-ETS fusion","termid":"MONDO:0958160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round cell sarcoma with EWSR1-NFATC2 gene fusion","secondary_identifiers":["MEDGEN:1791493","UMLS:C5555052"],"termid":"MONDO:0958299","xrefs":{"Monarch":{"xref_id":"0958299"}}}


id: PBO:0043201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF-CMTM1 readthrough","termid":"PBO:0043201"}


id: GO:1901925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus, and that occurs as a response to the mitotic cell cycle spindle assembly checkpoint. In S. cerevisiae, this process involves inhibition of the karyopherin/importin Kap121p (also known as Pse1p), which acts as the specific nuclear import receptor for several proteins, including Glc7p. Glc7p functions in opposition to key spindle assembly checkpoint protein Aurora kinase (Ipl1p).","definition_xrefs":["GOC:TermGenie","GOC:dgf","PMID:23177738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"GO:0072479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein import into nucleus during spindle assembly checkpoint","synonyms":[{"name":"KTIP","type":"related"},{"name":"Kap121p transport inhibitory pathway","type":"related"},{"name":"negative regulation of protein import into nucleus during mitotic cell cycle spindle assembly checkpoint","type":"exact"}],"termid":"GO:1901925"}


id: GO:0050621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + O2 = alpha,beta-didehydrotryptophan + H2O2 + H+.","definition_xrefs":["EC:1.3.3.10","RHEA:19901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tryptophan alpha,beta-oxidase activity","secondary_identifiers":["KEGG_REACTION:R05317","MetaCyc:1.4.3.17-RXN"],"synonyms":[{"name":"L-tryptophan 2',3'-oxidase activity","type":"related"},{"name":"L-tryptophan alpha,beta-dehydrogenase activity","type":"related"},{"name":"L-tryptophan:oxygen alpha,beta-oxidoreductase activity","type":"related"},{"name":"tryptophan a,b-oxidase activity","type":"exact"}],"termid":"GO:0050621"}


id: GO:1990441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","PMID:21113145","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (obsolete GO:1990441)","synonyms":[{"name":"ER stress-induced negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"reduction of transcription from RNA polymerase II promoter under ER stress","type":"exact"},{"name":"repression of transcription from RNA polymerase II promoter under ER stress","type":"exact"},{"name":"suppression of transcription from RNA polymerase II promoter under ER stress","type":"exact"}],"termid":"GO:1990441"}


id: MONDO:0009192
data:
  {"annotated_genes":["SJAG_01942","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84919,84920],"is_not":false,"summary":null,"term":"MONDO:0009192"}]},"cv_name":"mondo","definition":"Wolcott-Rallison syndrome (WRS) is a very rare genetic disease, characterized by permanent neonatal diabetes mellitus (PNDM) with multiple epiphyseal dysplasia and other clinical manifestations, including recurrent episodes of acute liver failure.","definition_xrefs":["Orphanet:1667"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Wolcott-Rallison syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:140926","OMIM:226980","DOID:0090060","icd11.foundation:2096915129","UMLS:C0432217","GARD:5589","NCIT:C131007","MESH:C536739","SCTID:254066006"],"synonyms":[{"name":"IDDM-MED syndrome","type":"related"},{"name":"Iddm-Med syndrome","type":"related"},{"name":"MED-IDDM syndrome","type":"related"},{"name":"Med-Iddm syndrome","type":"related"},{"name":"WRS","type":"exact"},{"name":"Wolcott Rallison syndrome","type":"related"},{"name":"Wolcott-Rallison syndrome","type":"exact"},{"name":"early-onset diabetes mellitus with multiple epiphyseal dysplasia","type":"exact"},{"name":"epiphyseal dysplasia multiple with early-onset diabetes mellitus","type":"related"},{"name":"epiphyseal dysplasia, multiple, with early-onset diabetes mellitus","type":"related"}],"termid":"MONDO:0009192","terms_by_termid":{"MONDO:0009192":null},"xrefs":{"Monarch":{"xref_id":"0009192"}}}


id: PBO:0055029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2444","termid":"PBO:0055029"}


id: GO:0039022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric duct over time, from its formation to the mature structure. The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the pronephric kidney.","definition_xrefs":["XAO:0000063","ZFA:0000150","PMID:15647339","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephric duct development","termid":"GO:0072176"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric duct development","termid":"GO:0039022"}


id: PR:Q9HGM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AFG3-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04081","PANTHER:PTHR23076:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complexes assembly protein rca1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.09","secondary_identifiers":["UniProtKB:Q9HGM3"],"synonyms":[{"name":"Spom972h-AFG3L2","type":"exact"}],"termid":"PR:Q9HGM3"}


id: PBO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts","termid":"PBO:0002125"}


id: FYPO:0003480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which one or more transfer RNA (tRNA) molecules contains no queuosine residues.","definition_xrefs":["PMID:24911101","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased queuosine level in tRNA","termid":"FYPO:0003427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0003427"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0003427"],"is_obsolete":false,"name":"queuosine absent from tRNA","termid":"FYPO:0003480"}


id: PBO:0090978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Iss10 ortholog","termid":"PBO:0090978"}


id: PR:O13858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sle1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome protein sle1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.07","synonyms":[{"name":"SEG1-like eisosome protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sle1","type":"exact"}],"termid":"PR:O13858"}


id: PBO:0056691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic double-stranded break formation protein 1","termid":"PBO:0056691"}


id: GO:0062021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The protein localization to chromatin by which a cohesin ring complex is topologically linked to dsDNA (leading strand) as part of the mitotic cell cycle.","definition_xrefs":["PMID:29358048","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin dsDNA (leading strand) loading (obsolete GO:0062021)","termid":"GO:0062021"}


id: GO:0009357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the transfer of a phosphate from protein N(PI)-phosphohistidine to a sugar molecule. It is enzyme II of the phosphotransferase system.","definition_xrefs":["PMID:2951378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase complex","termid":"GO:0009357"}


id: MONDO:0015525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the limbs","secondary_identifiers":["MEDGEN:1680202","Orphanet:157808","MESH:C535762","UMLS:C5190522","GARD:20015"],"synonyms":[{"name":"congenital pseudarthrosis of the limbs","type":"exact"},{"name":"congenital pseudoarthrosis","type":"related"}],"termid":"MONDO:0015525","xrefs":{"Monarch":{"xref_id":"0015525"}}}


id: GO:1900143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oligodendrocyte apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glial cell apoptotic process","termid":"GO:0034352"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte apoptotic process","termid":"GO:1900141"},{"relation_name":"positively_regulates","term_name":"oligodendrocyte apoptotic process","termid":"GO:0097252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oligodendrocyte apoptotic process","synonyms":[{"name":"activation of oligodendrocyte apoptosis","type":"narrow"},{"name":"activation of oligodendrocyte apoptotic process","type":"narrow"},{"name":"positive regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"up regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"up regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"up-regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"up-regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"upregulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"upregulation of oligodendrocyte apoptotic process","type":"exact"}],"termid":"GO:1900143"}


id: PBO:0075192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 4","termid":"PBO:0075192"}


id: PBO:0046620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 1, envelope","termid":"PBO:0046620"}


id: GO:0099052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The membrane scission process that is the final step in the formation of a clathrin-coated endocytic vesicle: separation from the plasma membrane.","definition_xrefs":["PMID:21779028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle scission involved in endocytosis","termid":"GO:0099051"},{"relation_name":"part_of","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"vesicle scission involved in clathrin-mediated endocytosis","termid":"GO:0099052"}


id: GO:1900486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isopentenyl diphosphate biosynthetic process, mevalonate pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:2001210"},{"relation_name":"positively_regulates","term_name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0055086","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","synonyms":[{"name":"activation of Ac-MVA pathway","type":"exact"},{"name":"activation of acetate-mevalonate pathway","type":"exact"},{"name":"activation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"activation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"narrow"},{"name":"activation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"activation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"positive regulation of Ac-MVA pathway","type":"exact"},{"name":"positive regulation of acetate-mevalonate pathway","type":"exact"},{"name":"positive regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"positive regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"positive regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"up regulation of Ac-MVA pathway","type":"exact"},{"name":"up regulation of acetate-mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"up-regulation of Ac-MVA pathway","type":"exact"},{"name":"up-regulation of acetate-mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"upregulation of Ac-MVA pathway","type":"exact"},{"name":"upregulation of acetate-mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"}],"termid":"GO:1900486"}


id: PBO:0062938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 3","termid":"PBO:0062938"}


id: GO:0015159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polysaccharides from one side of a membrane to the other. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}


id: FYPO:0002510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"},{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased protein palmitoylation during vegetative growth","synonyms":[{"name":"increased protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002510"}


id: MONDO:0003507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choriocarcinoma arising from the ovary. When it appears before puberty is of germ cell origin. In children and young adults signs and symptoms include precocious pseudopuberty and vaginal bleeding. Serum human chorionic gonadotropin is elevated. Germ cell derived ovarian choriocarcinoma should be differentiated from primary or metastatic gestational choriocarcinoma affecting the ovary. The prognosis of germ cell derived choriocarcinoma is less favorable and requires more aggressive chemotherapy treatment regimens compared to gestational choriocarcinoma.","definition_xrefs":["NCIT:C4515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"},{"relation_name":"is_a","term_name":"malignant germ cell tumor of ovary","termid":"MONDO:0018171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"choriocarcinoma of ovary","secondary_identifiers":["UMLS:C0346181","DOID:5550","EFO:1000413","SCTID:254870004","MEDGEN:91089"],"synonyms":[{"name":"choriocarcinoma of ovary","type":"exact"},{"name":"choriocarcinoma of the ovary","type":"exact"},{"name":"germ cell choriocarcinoma of ovary","type":"exact"},{"name":"germ cell choriocarcinoma of the ovary","type":"exact"},{"name":"ovarian choriocarcinoma","type":"exact"},{"name":"ovarian germ cell choriocarcinoma","type":"exact"},{"name":"ovary choriocarcinoma (disease)","type":"exact"}],"termid":"MONDO:0003507","xrefs":{"Monarch":{"xref_id":"0003507"}}}


id: PBO:0088579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPAC4G9.22 syntenic ortholog, no amino acid similarity (sequence or composition), possibly both are RNAs","termid":"PBO:0088579"}


id: PBO:0081752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 681","termid":"PBO:0081752"}


id: GO:0005869
data:
  {"annotated_genes":["SJAG_05185","SJAG_00140","SJAG_03673","SJAG_01739","SJAG_00397"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79661,94396,102141,110189,113076],"is_not":false,"summary":null,"term":"GO:0005869"}]},"cv_name":"cellular_component","definition":"A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00397":null,"SJAG_01739":null,"SJAG_03673":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991","GO:0015629"],"is_obsolete":false,"name":"dynactin complex","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"termid":"GO:0005869","terms_by_termid":{"GO:0005869":null}}


id: PBO:0060402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 10, NatA catalytic subunit","termid":"PBO:0060402"}


id: PBO:0090196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ksp1","termid":"PBO:0090196"}


id: PBO:0070677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 48","termid":"PBO:0070677"}


id: MONDO:0007103
data:
  {"annotated_genes":["SJAG_00668","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84469,86500],"is_not":false,"summary":null,"term":"MONDO:0007103"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C531617","DOID:0060193","OMIM:105400","UMLS:C1862939","MEDGEN:400169"],"synonyms":[{"name":"ALS1","type":"exact"},{"name":"FALS","type":"related"},{"name":"amyotrophic lateral sclerosis 1","type":"exact"},{"name":"amyotrophic lateral sclerosis 1, autosomal dominant","type":"related"},{"name":"amyotrophic lateral sclerosis 1, autosomal dominant amyotrophic lateral sclerosis 1, autosomal recessive, included","type":"related"},{"name":"amyotrophic lateral sclerosis 1, autosomal recessive","type":"related"},{"name":"amyotrophic lateral sclerosis 1, familial","type":"related"},{"name":"amyotrophic lateral sclerosis type 1","type":"exact"},{"name":"amyotrophic lateral sclerosis, autosomal dominant","type":"related"},{"name":"amyotrophic lateral sclerosis, familial","type":"related"},{"name":"amyotrophic lateral sclerosis, sporadic","type":"related"},{"name":"amyotrophic lateral sclerosis, sporadic, included","type":"related"},{"name":"amyotrophic lateral sclerosis, susceptibility to","type":"related"}],"termid":"MONDO:0007103","terms_by_termid":{"MONDO:0007103":null},"xrefs":{"Monarch":{"xref_id":"0007103"}}}


id: PATO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking complete growth, differentiation, or development.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immature","synonyms":[{"name":"underdeveloped","type":"related"}],"termid":"PATO:0001501"}


id: PBO:0057504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 622","termid":"PBO:0057504"}


id: MOD:00424
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-pyridylethyl-L-cysteine.","definition_xrefs":["PubMed:8783016","Unimod:31#C","OMSSA:112","PubMed:11760118","PubMed:626389","DeltaMass:253","PubMed:8297018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-pyridylethyl-L-cysteine","synonyms":[{"name":"PECys","type":"exact"},{"name":"Pyridylethyl","type":"related"},{"name":"Pyridylethyl Cystenyl","type":"exact"},{"name":"S-pyridinylethyl-L-cysteine","type":"exact"},{"name":"S-pyridylethylation","type":"related"},{"name":"spyridylethylc","type":"exact"},{"name":"vinylpyridine derivatized cysteine residue","type":"exact"}],"termid":"MOD:00424"}


id: GO:1904992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26554819","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dopamine receptor signaling pathway","termid":"GO:0060161"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:1904990"},{"relation_name":"positively_regulates","term_name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:0007195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"narrow"},{"name":"activation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"narrow"},{"name":"activation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"narrow"},{"name":"activation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"activation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"narrow"},{"name":"positive regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"positive regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"positive regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"positive regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"up regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"up regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"up regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"up regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"up regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"up-regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"up-regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"up-regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"up-regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"up-regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"upregulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"upregulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"upregulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"upregulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"upregulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:1904992"}


id: FYPO:0006147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from early meiotic genes measured in a cell is lower than normal during a cellular response to copper ion starvation during the meiotic cell cycle. Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:24569997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of early meiotic gene mRNA during cellular response to copper ion starvation during meiotic cell cycle","synonyms":[{"name":"decreased level of early meiosis gene mRNA during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene RNA during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene transcripts during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006147"}


id: PBO:0075638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 3","termid":"PBO:0075638"}


id: GO:1901454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to toluene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to toluene","termid":"GO:1901424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to toluene","termid":"GO:1901454"}


id: PBO:0091431
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 kb of 36 amino acid repeat","termid":"PBO:0091431"}


id: MONDO:0017773
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007620"},{"annotations":[84649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009515"}]},"cv_name":"mondo","definition":"A metabolic disorder characterized by deficiency of high density (alpha) lipoprotein in the blood.","definition_xrefs":["NCIT:C84774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypoalphalipoproteinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:190785000","Orphanet:31153","GARD:18801","icd11.foundation:1731667610","MedDRA:10065156","UMLS:C0151691","MESH:D052456","MEDGEN:57731","NANDO:2200605"],"termid":"MONDO:0017773","terms_by_termid":{"MONDO:0007620":null,"MONDO:0009515":null},"xrefs":{"Monarch":{"xref_id":"0017773"}}}


id: PBO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 h4.1","termid":"PBO:0002644"}


id: PBO:0086655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; haploid deletion mutant exhibits synthetic phenotype with alpha-synuclein; SWAT-GFP fusion protein localizes to the endoplasmic reticulum while mCherry fusion protein localizes to both the endoplasmic reticulum and vacuole","termid":"PBO:0086655"}


id: GO:1990451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in the homeostasis of organismal or cellular pH (with pH < 7). pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:go_curators","PMID:10615049","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to acidic pH","termid":"GO:0071468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular stress response to acidic pH","synonyms":[{"name":"cellular stress response to acidity","type":"broad"}],"termid":"GO:1990451"}


id: PBO:0091684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA nam2","termid":"PBO:0091684"}


id: PBO:0063916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3CD antisense RNA 1","termid":"PBO:0063916"}


id: PATO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pressure which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pressure","termid":"PATO:0001025"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased pressure","synonyms":[{"name":"low pressure","type":"exact"}],"termid":"PATO:0001575"}


id: GO:0072499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of a photoreceptor cell axon growth cone to its target in the optic lobe in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:sart","PMID:20826677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell axon guidance","synonyms":[{"name":"photoreceptor cell axon pathfinding","type":"exact"}],"termid":"GO:0072499"}


id: PBO:0028820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_reversal","termid":"PBO:0028820"}


id: GO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling cysteine to cysteinyl-tRNA in a mitochondrion, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl-tRNA aminoacylation","termid":"GO:0006423"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006520","GO:0010467","GO:0008150","GO:0006399","GO:0140053"],"is_obsolete":false,"name":"mitochondrial cysteinyl-tRNA aminoacylation","termid":"GO:0070147"}


id: PBO:0049494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 1","termid":"PBO:0049494"}


id: MOD:00097
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycine amide.","definition_xrefs":["RESID:AA0088","PubMed:13591312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine amide","synonyms":[{"name":"2-aminoacetamide","type":"exact"},{"name":"2-aminoethanamide","type":"exact"},{"name":"2-azanylethanamide","type":"exact"},{"name":"GlyN","type":"exact"},{"name":"MOD_RES Glycine amide","type":"exact"},{"name":"amidated glycine","type":"exact"},{"name":"glycinamide","type":"exact"},{"name":"glycine amide","type":"exact"}],"termid":"MOD:00097"}


id: PBO:0086672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; partially overlaps RND5-3; YLR156C-A has a paralog, YLR159C-A, that arose from a segmental duplication","termid":"PBO:0086672"}


id: MONDO:0010983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal dominant inheritance of paroxysmal choreoathetosis and progressive spastic paraplegia, episodes are often precipitated by alcohol, fatigue, or emotional stress that has material basis in heterozygous mutation in the SLC2A1 gene on chromosome 1p34.","definition_xrefs":["DOID:0090044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"dystonia 9","secondary_identifiers":["NANDO:1200520","Orphanet:53583","SCTID:715564000","UMLS:C1832855","GARD:16656","MESH:C563401","OMIM:601042","MEDGEN:371427"],"synonyms":[{"name":"Cse choreoathetosis, paroxysmal, with episodic ataxia","type":"related"},{"name":"DYT9","type":"exact"},{"name":"choreoathetosis, kinesigenic, with episodic ataxia and spasticity","type":"related"},{"name":"choreoathetosis/spasticity, episodic","type":"related"},{"name":"dystonia 9","type":"exact"},{"name":"dystonia type 9","type":"exact"},{"name":"episodic choreoathetosis/spasticity","type":"exact"},{"name":"paroxysmal dystonic choreathetosis with episodic ataxia and spasticity","type":"related"}],"termid":"MONDO:0010983","xrefs":{"Monarch":{"xref_id":"0010983"}}}


id: GO:1905277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["PMID:25745997","GO_REF:0000058","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epithelial tube formation","termid":"GO:1905276"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial tube formation","synonyms":[{"name":"down regulation of epithelial tube formation","type":"exact"},{"name":"down-regulation of epithelial tube formation","type":"exact"},{"name":"downregulation of epithelial tube formation","type":"exact"},{"name":"inhibition of epithelial tube formation","type":"narrow"}],"termid":"GO:1905277"}


id: PATO:0001874
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being cylindrical, in which the height is less than the diameter.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cylindrical","termid":"PATO:0001873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoid","synonyms":[{"name":"disc-shaped","type":"exact"},{"name":"disk-shaped","type":"exact"}],"termid":"PATO:0001874"}


id: MONDO:0800100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by gain of function, heterozygous variants in the RDH12 gene, and associated with late onset retinopathy with a mild phenotype, characterized by nyctalopia and visual field loss, but relatively preserved central vision.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RDH12-related dominant retinopathy","synonyms":[{"name":"RDH12-related dominant retinopathy","type":"exact"}],"termid":"MONDO:0800100","xrefs":{"Monarch":{"xref_id":"0800100"}}}


id: FYPO:0000199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of long tract gene conversion is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gene conversion during vegetative growth","termid":"FYPO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"increased long tract gene conversion","synonyms":[{"name":"DNA recombination defects, long tract gene conversion, increased","type":"exact"},{"name":"increased long tract gene conversion during mitotic cell cycle","type":"related"},{"name":"increased long tract gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0000199"}


id: GO:0043694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monoterpenes, terpenes with a C10 structure.","definition_xrefs":["PMID:25076942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"},{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoterpene catabolic process","synonyms":[{"name":"monoterpene catabolism","type":"exact"}],"termid":"GO:0043694"}


id: SO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_7_dimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_7_dimethylguanosine","secondary_identifiers":["RNAMOD:090"],"synonyms":[{"name":"N2 7 dimethylguanosine","type":"exact"},{"name":"N2,7-dimethylguanosine","type":"exact"},{"name":"m2,7G","type":"exact"}],"termid":"SO:0001338"}


id: GO:0004073
data:
  {"annotated_genes":["SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114920],"is_not":false,"summary":null,"term":"GO:0004073"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate 4-semialdehyde + NADP+ + phosphate = 4-phospho-L-aspartate + H+ + NADPH.","definition_xrefs":["EC:1.2.1.11","RHEA:24284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00234":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aspartate-semialdehyde dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN","KEGG_REACTION:R02291"],"synonyms":[{"name":"ASA dehydrogenase activity","type":"related"},{"name":"L-aspartate-4-semialdehyde:NADP+ oxidoreductase (phosphorylating)","type":"related"},{"name":"L-aspartate-beta-semialdehyde dehydrogenase activity","type":"related"},{"name":"L-aspartate-beta-semialdehyde:NADP oxidoreductase (phosporylating)","type":"related"},{"name":"aspartate semialdehyde dehydrogenase activity","type":"related"},{"name":"aspartic beta-semialdehyde dehydrogenase activity","type":"related"},{"name":"aspartic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004073","terms_by_termid":{"GO:0004073":null}}


id: FYPO:0002562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to cell division site","termid":"FYPO:0003946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to actomyosin contractile ring","synonyms":[{"name":"delayed onset of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"delayed onset of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"delayed onset of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"delayed onset of protein localization to contractile ring","type":"exact"},{"name":"delayed onset of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"delayed onset of protein localization to mitotic contractile ring","type":"exact"},{"name":"delayed onset of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"delayed protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0002562"}


id: PBO:0031150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_substance_in_cell","termid":"PBO:0031150"}


id: GO:0007464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R3/R4 photoreceptors commit to their cell fate. R3 and R4 are paired photoreceptors which contribute the outer rhabdomeres.","definition_xrefs":["PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"establishment of ommatidial planar polarity","termid":"GO:0042067"},{"relation_name":"part_of","term_name":"R3/R4 cell differentiation","termid":"GO:0048056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"R3/R4 cell fate commitment","termid":"GO:0007464"}


id: PBO:0083430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YER076C","termid":"PBO:0083430"}


id: GO:0052744
data:
  {"annotated_genes":["SJAG_03248","SJAG_02706","SJAG_00880"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004438"},{"annotations":[96099,105149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidyl-1D-myo-inositol monophosphate + H2O = phosphatidylinositol + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_02706":null,"SJAG_03248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol monophosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052744","terms_by_termid":{"GO:0004438":null,"GO:0043812":null}}


id: PBO:0001298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase","termid":"PBO:0001298"}


id: PBO:0017624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Avt3","termid":"PBO:0017624"}


id: GO:0150051
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The network of the Golgi apparatus structures located within the postsynapse.","definition_xrefs":["GOC:bc","PMID:23838184","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"postsynaptic Golgi apparatus","synonyms":[{"name":"Golgi outpost","type":"related"}],"termid":"GO:0150051"}


id: PBO:0056872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICB divergent transcript","termid":"PBO:0056872"}


id: PBO:0062865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 3","termid":"PBO:0062865"}


id: PBO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 2","termid":"PBO:0043131"}


id: GO:0097153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to the apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete cysteine-type endopeptidase activity involved in apoptotic process (obsolete GO:0097153)","secondary_identifiers":["Reactome:R-HSA-6800797"],"synonyms":[{"name":"caspase activity","type":"broad"},{"name":"metacaspase activity","type":"narrow"}],"termid":"GO:0097153"}


id: PBO:0059554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Val (GUN)","termid":"PBO:0059554"}


id: MONDO:0008652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital vertical talus (CVT) is a rare pedal deformity recognizable at birth by a dislocation of the talonavicular joint, resulting in a characteristic radiographic near-vertical orientation of the talus.","definition_xrefs":["Orphanet:178382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital deformities of limbs","termid":"MONDO:0017427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital vertical talus","secondary_identifiers":["UMLS:C0240912","icd11.foundation:1525079646","SCTID:205082007","MESH:C536345","MEDGEN:66821","GARD:5488","ICD9:755.67","DOID:0111568","MedDRA:10066242","OMIM:192950"],"synonyms":[{"name":"CVT","type":"related"},{"name":"Charcot-Marie-Tooth disease, foot deformity of","type":"exact"},{"name":"congenital convex foot","type":"exact"},{"name":"congenital convex pes valgus","type":"exact"},{"name":"congenital rocker-bottom foot","type":"exact"},{"name":"pes valgus, congenital convex","type":"related"},{"name":"rocker bottom foot","type":"related"},{"name":"rocker-bottom foot","type":"related"},{"name":"rocker-bottom foot deformity","type":"related"},{"name":"vertical talus","type":"related"},{"name":"vertical talus, congenital","type":"related"}],"termid":"MONDO:0008652","xrefs":{"Monarch":{"xref_id":"0008652"}}}


id: PBO:0059157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase domain containing 1","termid":"PBO:0059157"}


id: GO:0046673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the compound eye retina.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye retinal cell programmed cell death","termid":"GO:0046669"},{"relation_name":"is_a","term_name":"negative regulation of retinal cell programmed cell death","termid":"GO:0046671"},{"relation_name":"negatively_regulates","term_name":"compound eye retinal cell programmed cell death","termid":"GO:0046667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye retinal cell programmed cell death","synonyms":[{"name":"down regulation of retinal cell programmed cell death","type":"broad"},{"name":"down-regulation of retinal cell programmed cell death","type":"broad"},{"name":"downregulation of retinal cell programmed cell death","type":"broad"},{"name":"inhibition of retinal cell programmed cell death","type":"broad"},{"name":"negative regulation of retina cell programmed cell death","type":"broad"},{"name":"negative regulation of retinal cell programmed cell death","type":"broad"}],"termid":"GO:0046673"}


id: MONDO:0060577
data:
  {"annotated_genes":["SJAG_04762"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84440],"is_not":false,"summary":null,"term":"MONDO:0060577"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04762":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, ataxia, and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1613354","UMLS:C4540188","GARD:22576","OMIM:617709"],"synonyms":[{"name":"NEDMAS","type":"related"},{"name":"neurodevelopmental disorder with microcephaly, ataxia, and seizures","type":"exact"}],"termid":"MONDO:0060577","terms_by_termid":{"MONDO:0060577":null},"xrefs":{"Monarch":{"xref_id":"0060577"}}}


id: PBO:0068314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF14 pseudogene 2","termid":"PBO:0068314"}


id: GO:0086010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"},{"relation_name":"part_of","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during action potential","termid":"GO:0086010"}


id: PBO:0074925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 93","termid":"PBO:0074925"}


id: GO:0010598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses NAD(P)H dehydrogenase (plastoquinone) activity. The complex is one of the components of the electron transport chain. It is involved in electron transport from an unidentified electron donor, possibly NADH, NADPH or ferredoxin(Fd) to the plastoquinone pool.","definition_xrefs":["PMID:15608332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NAD(P)H dehydrogenase complex (plastoquinone)","termid":"GO:0010598"}


id: MONDO:0008343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary atresia with ventricular septal defect (PA-VSD) is a rare cyanotic congenital heart malformation characterized by underdevelopment of the right ventricular outflow tract and atresia of the pulmonary valve, ventricular septal defect (VSD) and pulmonary collateral vessels. Clinical features depend on the anatomic variability of the lesion and patients may be minimally symptomatic, severely cyanotic or may develop congestive heart failure. PA-VSD may represent a severe form of Tetralogy of Fallot.","definition_xrefs":["Orphanet:1207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"conotruncal heart malformations","termid":"MONDO:0016581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary atresia with ventricular septal defect","secondary_identifiers":["NANDO:1200708","MEDGEN:87492","MESH:C562833","NANDO:2200252","OMIM:178370","SCTID:253591008","UMLS:C0344976","NCIT:C99033","GARD:4588"],"synonyms":[{"name":"pulmonary atresia with ventricular septal defect","type":"exact"},{"name":"pulmonary valve atresia with ventricular septal defect","type":"exact"}],"termid":"MONDO:0008343","xrefs":{"Monarch":{"xref_id":"0008343"}}}


id: GO:0055112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splitting or migration of one epithelial sheet into two involved in the process of deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"delamination involved in gastrulation with mouth forming second","termid":"GO:0055112"}


id: GO:0102053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (-)-jasmonate + L-isoleucine + ATP(4-) = H+ + (-)-jasmonoyl-L-isoleucine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-jasmonoyl-isoleucine synthetase activity (obsolete GO:0102053)","termid":"GO:0102053"}


id: PBO:0005716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase Fmn1","termid":"PBO:0005716"}


id: PBO:0076805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4 pseudogene 2","termid":"PBO:0076805"}


id: PBO:0080371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VOPP1 divergent transcript","termid":"PBO:0080371"}


id: PBO:0005736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cut3 interacting protein Cti1, predicted exosome subunit","termid":"PBO:0005736"}


id: GO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + 2 [Fe(III)cytochrome c] = 2 [Fe(II)cytochrome c] + 2 H+ + pyruvate.","definition_xrefs":["RHEA:19909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate dehydrogenase activity","termid":"GO:0004457"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-lactate dehydrogenase (cytochrome) activity","secondary_identifiers":["EC:1.1.2.3","MetaCyc:L-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN"],"synonyms":[{"name":"(S)-lactate:ferricytochrome-c 2-oxidoreductase activity","type":"related"},{"name":"L(+)-lactate:cytochrome c oxidoreductase activity","type":"related"},{"name":"L-lactate cytochrome c oxidoreductase activity","type":"related"},{"name":"L-lactate cytochrome c reductase activity","type":"related"},{"name":"L-lactate ferricytochrome c oxidoreductase activity","type":"related"},{"name":"cytochrome b2","type":"related"},{"name":"cytochrome b2 (flavin-free derivative of flavocytochrome b2)","type":"related"},{"name":"dehydrogenase, lactate (cytochrome)","type":"related"},{"name":"flavocytochrome b2","type":"related"},{"name":"lactate dehydrogenase (cytochrome)","type":"related"},{"name":"lactic acid dehydrogenase activity","type":"broad"},{"name":"lactic cytochrome c reductase activity","type":"related"}],"termid":"GO:0004460"}


id: PBO:0048289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 1","termid":"PBO:0048289"}


id: GO:0061223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell differentiation","termid":"GO:0061223"}


id: PBO:0087797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Syntaxin-like t-SNARE; forms a complex with Tlg1p and Vti1p and mediates fusion of endosome-derived vesicles with the late Golgi; required along with VPS45 for an early step of the constitutive CVT pathway; interactions with Vps45 prevents Tlg2p degradation, and facilitates t-SNARE complex formation; homologous to mammalian SNARE protein syntaxin 16 (Sx16)","termid":"PBO:0087797"}


id: GO:0042988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to X11-like protein, a neuron-specific adaptor protein.","definition_xrefs":["PMID:12780348","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"X11-like protein binding","synonyms":[{"name":"X11L binding","type":"exact"}],"termid":"GO:0042988"}


id: PBO:0007964
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yeast Phosphatase Activator","termid":"PBO:0007964"}


id: MONDO:0006136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical endometrioid adenocarcinoma (obsolete MONDO:0006136)","termid":"MONDO:0006136","xrefs":{"Monarch":{"xref_id":"0006136"}}}


id: PBO:0051544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 cytokine family signal transducer","termid":"PBO:0051544"}


id: MONDO:0014002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nocturnal frontal lobe epilepsy in which the cause of the disease is a mutation in the KCNT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-related hypermotor epilepsy","termid":"MONDO:0000030"},{"relation_name":"is_a","term_name":"autosomal dominant nocturnal frontal lobe epilepsy","termid":"MONDO:0020300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy 5","secondary_identifiers":["MEDGEN:767220","DOID:0060686","GARD:15891","OMIM:615005","UMLS:C3554306"],"synonyms":[{"name":"ENFL5","type":"exact"},{"name":"KCNT1 autosomal dominant nocturnal frontal lobe epilepsy","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy caused by mutation in KCNT1","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy type 5","type":"exact"},{"name":"epilepsy nocturnal frontal lobe, 5","type":"exact"},{"name":"epilepsy, nocturnal frontal lobe, 5","type":"related"},{"name":"epilepsy, nocturnal frontal lobe, type 5","type":"exact"},{"name":"nocturnal frontal lobe epilepsy 5","type":"exact"}],"termid":"MONDO:0014002","xrefs":{"Monarch":{"xref_id":"0014002"}}}


id: MONDO:0009546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrosomia adiposa congenita","secondary_identifiers":["OMIM:248100","UMLS:C1855468","MEDGEN:340875","MESH:C565425"],"synonyms":[{"name":"macrosomia adiposa congenita","type":"exact"}],"termid":"MONDO:0009546","xrefs":{"Monarch":{"xref_id":"0009546"}}}


id: PBO:0075198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 10","termid":"PBO:0075198"}


id: GO:0033574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to testosterone","synonyms":[{"name":"response to testosterone stimulus","type":"exact"}],"termid":"GO:0033574"}


id: GO:0043595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A layer surrounding a bacterial endospore found inside the outer endospore membrane, but outside the membrane surrounding the endospore core. It consists of peptidoglycan of a different chemical nature than that found in vegetative cell walls which results in less cross-linking of peptidoglycan.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endospore external encapsulating structure","termid":"GO:0043591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"endospore cortex","termid":"GO:0043595"}


id: GO:0015736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hexuronate is transported across a lipid bilayer, from one side of a membrane to the other. A hexuronate is any monocarboxylic acid derived from a hexose by oxidation of C-6.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uronic acid transmembrane transport","termid":"GO:0015735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"hexuronate transmembrane transport","synonyms":[{"name":"hexuronate transport","type":"related"}],"termid":"GO:0015736"}


id: GO:0018688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane + O2 + 2 H+ + 2 e- = cis-2,3-dihydrodiol DDT. 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane is also known as DDT.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete DDT 2,3-dioxygenase activity (obsolete GO:0018688)","termid":"GO:0018688"}


id: GO:0033797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 e(-) + 2 H+ + selenate = H2O + selenite.","definition_xrefs":["RHEA:14029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"selenate reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0828","EC:1.97.1.9","KEGG_REACTION:R07229","MetaCyc:RXN0-2101"],"synonyms":[{"name":"selenite:reduced acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0033797"}


id: PBO:0031862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_component_organization_phenotype","termid":"PBO:0031862"}


id: PBO:0062445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 110 pseudogene","termid":"PBO:0062445"}


id: PBO:0042301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD8B family member 2","termid":"PBO:0042301"}


id: PBO:0052633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 1","termid":"PBO:0052633"}


id: PBO:0080054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 25","termid":"PBO:0080054"}


id: MONDO:0009597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaphyseal chondrodysplasia","termid":"MONDO:0000138"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metaphyseal chondrodysplasia, Spahr type","secondary_identifiers":["UMLS:C0432225","icd11.foundation:1856002752","MESH:C537353","MEDGEN:140928","GARD:3563","SCTID:254084008","Orphanet:2501","OMIM:250400"],"synonyms":[{"name":"MDST","type":"related"},{"name":"Spahr type metaphyseal chondrodysplasia","type":"related"},{"name":"metaphyseal chondrodysplasia Spahr type","type":"related"},{"name":"metaphyseal chondrodysplasia, Spahr type","type":"exact"},{"name":"metaphyseal dysplasia, Spahr type","type":"related"}],"termid":"MONDO:0009597","xrefs":{"Monarch":{"xref_id":"0009597"}}}


id: PR:P41890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scn3 gene.","definition_xrefs":["UniProtKB:P41890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut9-interacting protein scn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.13","synonyms":[{"name":"Spom972h-scn3","type":"exact"}],"termid":"PR:P41890"}


id: PBO:0113367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates lipolysis; inhibits oxidative damage induced by amphotericin B; overexpression increases flocculation, biofilm formation, invasive and pseudohyphal growth; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; null mutant displays increased translation rate and increased readthrough of premature stop codons; TLD1 has a paralog, IRC23, that arose from the whole genome duplication","termid":"PBO:0113367"}


id: MONDO:0004273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign and well circumscribed neoplasm that arises from the breast. It is characterized by the proliferation of epithelial cells with extensive apocrine metaplasia.","definition_xrefs":["NCIT:C40383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenoma","termid":"MONDO:0002058"},{"relation_name":"is_a","term_name":"apocrine adenoma","termid":"MONDO:0002804"},{"relation_name":"is_a","term_name":"sweat gland adenoma","termid":"MONDO:0021110"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"},{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"breast apocrine adenoma","secondary_identifiers":["DOID:7540","icd11.foundation:636674012","MEDGEN:235590","UMLS:C1388299"],"synonyms":[{"name":"apocrine adenoma of breast","type":"exact"},{"name":"breast apocrine adenoma","type":"exact"}],"termid":"MONDO:0004273","xrefs":{"Monarch":{"xref_id":"0004273"}}}


id: MONDO:0017021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease specific to childhood associated with a connective tissue disease (obsolete MONDO:0017021)","secondary_identifiers":["Orphanet:264704"],"synonyms":[{"name":"secondary ILD specific to childhood associated with a connective tissue disease","type":"exact"}],"termid":"MONDO:0017021","xrefs":{"Monarch":{"xref_id":"0017021"}}}


id: MONDO:0060702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, di rocco type","secondary_identifiers":["OMIM:617974","UMLS:C4693799","MEDGEN:1646454"],"synonyms":[{"name":"SEMDDR","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Di Rocco type","type":"related"}],"termid":"MONDO:0060702","xrefs":{"Monarch":{"xref_id":"0060702"}}}


id: PBO:0091947
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ctp1 is intrinsically disordered except at the N-terminus","termid":"PBO:0091947"}


id: MONDO:0004765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asthma that is triggered by factors not related to allergies such as anxiety, stress, exercise, cold air, dry air, hyperventilation, smoke, viruses, chemical irritants, autonomic imbalance, hormonal deficiencies and psychogenic influences. It is characterized by airway obstruction and inflammation that is at least partially reversible with medication. The symptoms include coughing, wheezing, shortness of breath or rapid breathing, and chest tightness.","definition_xrefs":["DOID:9360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrinsic asthma","secondary_identifiers":["MEDGEN:510123","ICD9:493.1","UMLS:C0155880","SCTID:266361008"],"termid":"MONDO:0004765","xrefs":{"Monarch":{"xref_id":"0004765"}}}


id: PBO:0072825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMM50 sorting and assembly machinery component pseudogene 1","termid":"PBO:0072825"}


id: FYPO:0003526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actin filament-based movement is decreased. Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["GO:0030048","PMID:24954052","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based movement","termid":"FYPO:0005900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased actin filament-based movement","synonyms":[{"name":"decreased actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"decreased actin filament-based movement during vegetative growth","type":"exact"},{"name":"reduced actin filament-based movement","type":"exact"}],"termid":"FYPO:0003526"}


id: MONDO:0013116
data:
  {"annotated_genes":["SJAG_01647","SJAG_03992"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84761,84762],"is_not":false,"summary":null,"term":"MONDO:0013116"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01647":null,"SJAG_03992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"congenital cataract-progressive muscular hypotonia-hearing loss-developmental delay syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2751320","MESH:C567769","Orphanet:330054","MEDGEN:416525","GARD:10522","OMIM:613076"],"synonyms":[{"name":"congenital cataract-progressive muscular hypotonia-deafness-developmental delay syndrome","type":"exact"},{"name":"congenital cataract-progressive muscular hypotonia-hearing loss-developmental delay syndrome","type":"exact"},{"name":"mitochondrial Complex deficiency, combined","type":"related"},{"name":"myopathy with cataract and combined respiratory chain deficiency","type":"related"},{"name":"myopathy with cataract and combined respiratory-chain deficiency","type":"related"},{"name":"myopathy, mitochondrial progressive, with congenital cataract and developmental delay","type":"exact"},{"name":"myopathy, mitochondrial progressive, with congenital cataract, hearing loss, and developmental delay","type":"related"}],"termid":"MONDO:0013116","terms_by_termid":{"MONDO:0013116":null},"xrefs":{"Monarch":{"xref_id":"0013116"}}}


id: PR:O94603
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- epe1 gene.","definition_xrefs":["UniProtKB:O94603","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing histone demethylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.16c","synonyms":[{"name":"Spom972h-epe1","type":"exact"},{"name":"[Histone-H3]-lysine-36 demethylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heterochromatin-destabilizing protein epe1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94603"}


id: PBO:0026906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_swollen_binucleate_multiseptate_cell_with_central_constriction","termid":"PBO:0026906"}


id: PBO:0091456
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3125118_3125119insT","termid":"PBO:0091456"}


id: GO:0044223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic structure found in bacterial phyla Planctomycetes and Verrucomicrobia containing a condensed nucleoid and ribosomes and surrounded by an intracytoplasmic membrane. It is surrounded by ribosome-free cytoplasm, in a compartment called the paryphoplasm.","definition_xrefs":["PMID:19133117","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pirellulosome","termid":"GO:0044223"}


id: PBO:0084976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent (R,R)-butanediol dehydrogenase; catalyzes oxidation of (R,R)-2,3-butanediol to (3R)-acetoin, oxidation of meso-butanediol to (3S)-acetoin, and reduction of acetoin; enhances use of 2,3-butanediol as an aerobic carbon source","termid":"PBO:0084976"}


id: MONDO:0040654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of oculocutaneous albinism.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"oculocutaneous albinism","termid":"MONDO:0018910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant oculocutaneous albinism","secondary_identifiers":["MEDGEN:541335","SCTID:79417003","UMLS:C0268499"],"synonyms":[{"name":"autosomal dominant oculocutaneous albinism","type":"exact"},{"name":"oculocutaneous albinism, autosomal dominant","type":"exact"}],"termid":"MONDO:0040654","xrefs":{"Monarch":{"xref_id":"0040654"}}}


id: PBO:0083544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps TRP1/YDR007W on opposite strand","termid":"PBO:0083544"}


id: PBO:0076653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 10","termid":"PBO:0076653"}


id: FYPO:0006973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate methyl ester measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular L-glutamate methyl ester level","synonyms":[{"name":"decreased cellular L-glutamate methyl ester level during mitotic cell cycle","type":"related"},{"name":"decreased cellular L-glutamate methyl ester level during vegetative growth","type":"exact"},{"name":"decreased cellular glutamate methyl ester level during vegetative growth","type":"exact"},{"name":"reduced cellular L-glutamate methyl ester level","type":"exact"}],"termid":"FYPO:0006973"}


id: PBO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mdm10 (predicted)","termid":"PBO:0001300"}


id: FYPO:0001632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular tyrosine level","termid":"FYPO:0001641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar tyrosine level","synonyms":[{"name":"normal level of tyrosine in vacuole","type":"exact"},{"name":"normal vacuolar L-tyrosine level","type":"exact"},{"name":"normal vacuolar tyrosine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar tyrosine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001632"}


id: FYPO:0008244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from the prospore wall.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to prospore wall","termid":"FYPO:0008244"}


id: GO:0021870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuroblast acquires specialized structural and/or functional features of a Cajal-Retzius cell, one of a transient population of pioneering neurons in the cerebral cortex. These cells are slender bipolar cells of the developing marginal zone. One feature of these cells in mammals is that they express the Reelin gene.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex neuron differentiation","termid":"GO:0021895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Cajal-Retzius cell differentiation","termid":"GO:0021870"}


id: PBO:0049190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 1","termid":"PBO:0049190"}


id: GO:0048704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skeleton are generated and organized during the embryonic phase.","definition_xrefs":["PMID:16049113","GOC:dsf","GOC:dph","GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"},{"relation_name":"is_a","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"embryonic skeletal system development","termid":"GO:0048706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal system morphogenesis","synonyms":[{"name":"embryonic skeletal morphogenesis","type":"exact"}],"termid":"GO:0048704"}


id: MONDO:0010629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impacted teeth, multiple","secondary_identifiers":["OMIM:308280","MEDGEN:327004","UMLS:C1839965"],"synonyms":[{"name":"impacted teeth, multiple","type":"exact"}],"termid":"MONDO:0010629","xrefs":{"Monarch":{"xref_id":"0010629"}}}


id: MONDO:1011941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ancon dwarfism, non-human animal","secondary_identifiers":["OMIA:000302"],"termid":"MONDO:1011941","xrefs":{"Monarch":{"xref_id":"1011941"}}}


id: SO:0000527
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_C_cluster","synonyms":[{"name":"V D DJ C cluster","type":"exact"},{"name":"V-D-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000527"}


id: FYPO:0005347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus has a pointed shape during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:12390246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"pointed nucleus during mitotic interphase","synonyms":[{"name":"pointed nucleus during interphase of mitotic cell cycle","type":"exact"},{"name":"pointed nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0005347"}


id: GO:0050505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroquinone + UDP-D-glucose = H+ + hydroquinone O-beta-D-glucopyranoside + UDP.","definition_xrefs":["RHEA:12560","EC:2.4.1.218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"hydroquinone glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.218-RXN","KEGG_REACTION:R05769"],"synonyms":[{"name":"UDP-glucose:hydroquinone-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:hydroquinone-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"arbutin synthase activity","type":"related"},{"name":"hydroquinone:O-glucosyltransferase activity","type":"related"}],"termid":"GO:0050505"}


id: PBO:0045518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death domain containing 1","termid":"PBO:0045518"}


id: GO:0080071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indol-3-yl-methyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = indol-3-yl-methyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"gene_count":0,"genotype_count":0,"name":"obsolete indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity (obsolete GO:0080071)","termid":"GO:0080071"}


id: MONDO:0003791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A male urethral cancer that involves the prostatic urethra.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male urethral cancer","termid":"MONDO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostatic urethral cancer","secondary_identifiers":["DOID:6167","UMLS:C1514523","NCIT:C39870","MEDGEN:308065"],"synonyms":[{"name":"male urethral cancer of prostatic urethra","type":"exact"},{"name":"prostatic urethra male urethral cancer","type":"exact"},{"name":"prostatic urethral malignant neoplasm","type":"exact"}],"termid":"MONDO:0003791","xrefs":{"Monarch":{"xref_id":"0003791"}}}


id: PBO:0060063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 10","termid":"PBO:0060063"}


id: MONDO:0011973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc deficiency, transient neonatal","secondary_identifiers":["UMLS:C1842486","MEDGEN:330858","OMIM:608118","MESH:C564286"],"synonyms":[{"name":"TNZD","type":"related"},{"name":"zinc deficiency, neonatal, due to Low breast milk zinc","type":"related"},{"name":"zinc deficiency, transient neonatal","type":"exact"},{"name":"zinc in breast milk, reduced","type":"related"}],"termid":"MONDO:0011973","xrefs":{"Monarch":{"xref_id":"0011973"}}}


id: GO:0070081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing monoamines.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle","type":"exact"}],"termid":"GO:0070081"}


id: MONDO:0001949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of thyroiditis (disease).","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroiditis","termid":"MONDO:0004126"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute thyroiditis","secondary_identifiers":["icd11.foundation:737694495","MEDGEN:507399","DOID:14353","ICD9:245.0","ICD10CM:E06.0","SCTID:190293001","UMLS:C0001360"],"synonyms":[{"name":"acute thyroiditis (disease)","type":"exact"},{"name":"thyroiditis (disease), acute","type":"exact"}],"termid":"MONDO:0001949","xrefs":{"Monarch":{"xref_id":"0001949"}}}


id: PBO:0015680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4E, 4F complex E subunit isoform 2, stress response factor","termid":"PBO:0015680"}


id: FYPO:0002628
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in cell wall during vegetative growth","termid":"FYPO:0002627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of substance in cell wall during vegetative growth","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"decreased level of substance in cell wall during mitotic cell cycle","type":"related"},{"name":"reduced level of substance in cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002628","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: MOD:00033
data:
  {"annotated_genes":["SJAG_04238","SJAG_02827","SJAG_04953","SJAG_00096","SJAG_01029","SJAG_02388","SJAG_02489","SJAG_00109","SJAG_04125","SJAG_03032","SJAG_03290","SJAG_02694","SJAG_02260","SJAG_01970","SJAG_00254","SJAG_00288","SJAG_04553","SJAG_00784","SJAG_01626","SJAG_04067","SJAG_02435","SJAG_04789","SJAG_02504","SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[79729,79687,79745,79942,79973,79665,79686,79784,79689,79703,79898,79899,79963,79985,79731,79976,79921,79984,79920,79670,79696,79743,79924,79957,79981,79977,79974,79983,79901,79959,79902,79744,79704,79770,79773,79919,79933,79964,79965,79903,79918,79707,79688,79897,79958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"}]},"cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two or more amino acid residues with covalent bonds.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00784":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01626":null,"SJAG_01970":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02489":null,"SJAG_02504":null,"SJAG_02694":null,"SJAG_02827":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04238":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04953":null},"genotype_count":0,"is_obsolete":false,"name":"crosslinked residues","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"XLNK-Res-Res","type":"exact"}],"termid":"MOD:00033","terms_by_termid":{"MOD:00689":null}}


id: MONDO:0000987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a change in the gallbladder wall due to excess cholesterol.","definition_xrefs":["Wikipedia:Cholesterolosis_of_gallbladder"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cholesterolosis of gallbladder","secondary_identifiers":["ICD10CM:K82.4","icd11.foundation:2109132211","MEDGEN:509042","DOID:10254","SCTID:61565001","UMLS:C0152456","ICD9:575.6"],"synonyms":[{"name":"strawberry gallbladder","type":"exact"}],"termid":"MONDO:0000987","xrefs":{"Monarch":{"xref_id":"0000987"}}}


id: PBO:0114458
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sid2-Like Kinase","termid":"PBO:0114458"}


id: PBO:0078359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-2","termid":"PBO:0078359"}


id: PBO:0053259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF interleukin 6 family cytokine","termid":"PBO:0053259"}


id: PBO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily B member 1","termid":"PBO:0052111"}


id: PBO:0074191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 1","termid":"PBO:0074191"}


id: FYPO:0006221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:26132084","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to cell division site, with protein mislocalised to cytoplasm","type":"exact"},{"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein recruitment to cell division site, with protein mislocalized to cytoplasm","type":"related"},{"name":"reduced protein localization to cell division site, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0006221"}


id: GO:0061625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructose into pyruvate through a fructose-1-phosphate intermediate, with the concomitant production of ATP and NADH.","definition_xrefs":["GOC:dph","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose catabolic process","termid":"GO:0006001"},{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0005975","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"glycolytic process through fructose-1-phosphate","secondary_identifiers":["MetaCyc:PWY-8404"],"termid":"GO:0061625"}


id: PBO:0081820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 737","termid":"PBO:0081820"}


id: PBO:0060459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAIP pseudogene 2","termid":"PBO:0060459"}


id: GO:0034899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N,N-trimethylamine + NADPH + H+ + O2 = N,N,N-trimethylamine N-oxide + NADP+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1407","EC:1.14.13.148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"trimethylamine monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05623","RHEA:31979"],"termid":"GO:0034899"}


id: GO:0004709
data:
  {"annotated_genes":["SJAG_03753","SJAG_04777","SJAG_03384","SJAG_01718"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86760,91469,100089,105441],"is_not":false,"summary":null,"term":"GO:0004709"},{"annotations":[105440,100088,86759,91468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004706"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation and activation of a MAP kinase kinase; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases.","definition_xrefs":["PMID:9561267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01718":null,"SJAG_03384":null,"SJAG_03753":null,"SJAG_04777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0004672","GO:0003824","GO:0003674","GO:0140096","GO:0016301"],"is_obsolete":false,"name":"MAP kinase kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-727819","MetaCyc:2.7.11.25-RXN","GO:0004710","Reactome:R-HSA-2730887","Reactome:R-HSA-392530","EC:2.7.11.25","Reactome:R-HSA-451649","Reactome:R-HSA-933530"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKKKK-activated) activity","type":"related"},{"name":"MAP3K","type":"related"},{"name":"MAPK/ERK kinase kinase activity","type":"exact"},{"name":"MAPKKK activity","type":"related"},{"name":"MEK kinase activity","type":"related"},{"name":"MEKK","type":"related"},{"name":"MEKK activity","type":"exact"},{"name":"MEKK1","type":"related"},{"name":"MEKK2","type":"related"},{"name":"MEKK3","type":"related"},{"name":"MLK-like mitogen-activated protein triple kinase activity","type":"narrow"},{"name":"MLTK","type":"related"},{"name":"MLTKa","type":"related"},{"name":"MLTKb","type":"related"},{"name":"Mil/Raf","type":"related"},{"name":"REKS","type":"related"},{"name":"STK28","type":"related"},{"name":"cMos","type":"related"},{"name":"cRaf","type":"related"},{"name":"mitogen-activated protein kinase kinase kinase activity","type":"related"}],"termid":"GO:0004709","terms_by_termid":{"GO:0004706":null,"GO:0004709":null}}


id: MONDO:0032866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical dysplasia, complex, with other brain malformations 10","secondary_identifiers":["MEDGEN:1684859","UMLS:C5231458","OMIM:618677"],"synonyms":[{"name":"CDCBM10","type":"related"},{"name":"CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 10","type":"related"}],"termid":"MONDO:0032866","xrefs":{"Monarch":{"xref_id":"0032866"}}}


id: GO:0045615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plasmatocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hemocyte differentiation","termid":"GO:0045612"},{"relation_name":"is_a","term_name":"regulation of plasmatocyte differentiation","termid":"GO:0045613"},{"relation_name":"positively_regulates","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasmatocyte differentiation","synonyms":[{"name":"activation of plasmatocyte differentiation","type":"narrow"},{"name":"stimulation of plasmatocyte differentiation","type":"narrow"},{"name":"up regulation of plasmatocyte differentiation","type":"exact"},{"name":"up-regulation of plasmatocyte differentiation","type":"exact"},{"name":"upregulation of plasmatocyte differentiation","type":"exact"}],"termid":"GO:0045615"}


id: GO:1900088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inositol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol biosynthetic process","termid":"GO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of inositol biosynthetic process","synonyms":[{"name":"regulation of inositol anabolism","type":"exact"},{"name":"regulation of inositol biosynthesis","type":"exact"},{"name":"regulation of inositol formation","type":"exact"},{"name":"regulation of inositol synthesis","type":"exact"},{"name":"regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"regulation of vitamin Bh biosynthetic process","type":"exact"}],"termid":"GO:1900088"}


id: PBO:0090050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Sec11","termid":"PBO:0090050"}


id: PBO:0049255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin and cysteine rich domain containing 1","termid":"PBO:0049255"}


id: GO:0051742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyl-6-solanyl-1,4-benzoquinone + S-adenosyl-methionine = 2,3-dimethyl-6-solanyl-1,4-benzoquinone + S-adenosyl-homocysteine.","definition_xrefs":["MetaCyc:RXN-2762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-methyl-6-solanyl-1,4-benzoquinone methyltransferase activity","secondary_identifiers":["RHEA:37999"],"synonyms":[{"name":"MSBQ methyltransferase activity","type":"exact"}],"termid":"GO:0051742"}


id: PBO:0062864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 1","termid":"PBO:0062864"}


id: PBO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 2","termid":"PBO:0044074"}


id: GO:0035815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of renal sodium excretion","synonyms":[{"name":"natriuresis","type":"broad"}],"termid":"GO:0035815"}


id: PBO:0073635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 21, pseudogene","termid":"PBO:0073635"}


id: MONDO:0014841
data:
  {"annotated_genes":["SJAG_00159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84852],"is_not":false,"summary":null,"term":"MONDO:0014841"}]},"cv_name":"mondo","definition":"Any nonphotosensitive trichothiodystrophy in which the cause of the disease is a mutation in the GTF2E2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 6, nonphotosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16172","DOID:0111872","OMIM:616943","MEDGEN:934752","UMLS:C4310785"],"synonyms":[{"name":"GTF2E2 nonphotosensitive trichothiodystrophy","type":"exact"},{"name":"TTD6","type":"exact"},{"name":"nonphotosensitive trichothiodystrophy caused by mutation in GTF2E2","type":"exact"},{"name":"trichothiodystrophy 6, nonphotosensitive","type":"exact"},{"name":"trichothiodystrophy 6, nonphotosensitive; TTD6","type":"exact"}],"termid":"MONDO:0014841","terms_by_termid":{"MONDO:0014841":null},"xrefs":{"Monarch":{"xref_id":"0014841"}}}


id: PATO:0001273
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of grey color and high saturation.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001273 bright grey (obsolete PATO:0001273)","termid":"PATO:0001273"}


id: MONDO:0014617
data:
  {"annotated_genes":["SJAG_01851","SJAG_04157","SJAG_02180"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84521,84522,84523],"is_not":false,"summary":null,"term":"MONDO:0014617"}]},"cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the EEF1A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01851":null,"SJAG_02180":null,"SJAG_04157":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225343","GARD:16469","MEDGEN:895359","DOID:0070068","OMIM:616393"],"synonyms":[{"name":"EEF1A2 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD38","type":"exact"},{"name":"PRELDS","type":"exact"},{"name":"autosomal dominant intellectual disability 38","type":"exact"},{"name":"autosomal dominant mental retardation 38","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 38","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in EEF1A2","type":"exact"},{"name":"intellectual disability, autosomal dominant 38","type":"exact"},{"name":"intellectual disability, autosomal dominant type 38","type":"exact"},{"name":"mental retardation, autosomal dominant 38","type":"related"},{"name":"mental retardation, autosomal dominant type 38","type":"exact"},{"name":"psychomotor retardation, epilepsy, and language disability syndrome","type":"exact"}],"termid":"MONDO:0014617","terms_by_termid":{"MONDO:0014617":null},"xrefs":{"Monarch":{"xref_id":"0014617"}}}


id: PBO:0004255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIT family","termid":"PBO:0004255"}


id: GO:2000329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 cell lineage commitment.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 17 cell differentiation","termid":"GO:2000320"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell lineage commitment","termid":"GO:2000328"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 cell lineage commitment","termid":"GO:0072540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 17 cell lineage commitment","synonyms":[{"name":"negative regulation of T-helper 17 cell fate commitment","type":"exact"},{"name":"negative regulation of Th17 cell lineage commitment","type":"exact"},{"name":"negative regulation of Th17 fate commitment","type":"exact"}],"termid":"GO:2000329"}


id: MONDO:0009903
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84629],"is_not":false,"summary":null,"term":"MONDO:0009903"}]},"cv_name":"mondo","definition":"Postaxial acrofacial dysostosis (POADS) is a type of acrofacial dysostosis characterized by mandibular and malar hypoplasia, small and cup-shaped ears, lower lid ectropion, and symmetrical postaxial limb deficiencies with absence of the fifth digital ray and ulnar hypoplasia.","definition_xrefs":["Orphanet:246"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"postaxial acrofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1448","DOID:0111259","SCTID:66038001","UMLS:C0265257","ICD9:759.89","OMIM:263750","MESH:C537680","GARD:8410","MEDGEN:120522","icd11.foundation:70602060"],"synonyms":[{"name":"GWAFD","type":"related"},{"name":"Genee-Wiedemann acrofacial dysostosis","type":"related"},{"name":"Genee-Wiedemann syndrome","type":"related"},{"name":"Mandibulfacial dysostosis with postaxial limb anomalies","type":"exact"},{"name":"Miller Syndrome","type":"exact"},{"name":"Miller syndrome","type":"exact"},{"name":"POADS","type":"exact"},{"name":"POADS syndrome","type":"related"},{"name":"Wildervanck-Smith syndrome","type":"related"},{"name":"acrofacial dysostosis, Genee-Wiedmann type","type":"exact"},{"name":"postaxial acrodysostosis","type":"exact"},{"name":"postaxial acrofacial dysostosis","type":"exact"},{"name":"postaxial acrofacial dysostosis (POADS) syndrome","type":"related"}],"termid":"MONDO:0009903","terms_by_termid":{"MONDO:0009903":null},"xrefs":{"Monarch":{"xref_id":"0009903"}}}


id: MONDO:1011700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trapped neutrophil syndrome, non-human animal","secondary_identifiers":["OMIA:001428"],"termid":"MONDO:1011700","xrefs":{"Monarch":{"xref_id":"1011700"}}}


id: GO:0032387
data:
  {"annotated_genes":["SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intracellular transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of intracellular transport","type":"exact"},{"name":"down-regulation of intracellular transport","type":"exact"},{"name":"downregulation of intracellular transport","type":"exact"},{"name":"inhibition of intracellular transport","type":"narrow"}],"termid":"GO:0032387","terms_by_termid":{"GO:0042308":null}}


id: PBO:0055335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2763","termid":"PBO:0055335"}


id: PBO:0080640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 87B, pseudogene","termid":"PBO:0080640"}


id: MONDO:0004575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition produced by a deficiency of choline in animals. Choline is known as a lipotropic agent because it has been shown to promote the transport of excess fat from the liver under certain conditions in laboratory animals. Combined deficiency of choline (included in the B vitamin complex) and all other methyl group donors causes liver cirrhosis in some animals. Unlike compounds normally considered as vitamins, choline does not serve as a cofactor in enzymatic reactions. (From Saunders Dictionary & Encyclopedia of Laboratory Medicine and Technology, 1984)","definition_xrefs":["MESH:D002796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline deficiency disease","secondary_identifiers":["ICD9:266.2","MEDGEN:930","UMLS:C0008412","SCTID:238113006","DOID:8456"],"synonyms":[{"name":"choline deficiency","type":"exact"}],"termid":"MONDO:0004575","xrefs":{"Monarch":{"xref_id":"0004575"}}}


id: PBO:0089522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid reductase","termid":"PBO:0089522"}


id: FYPO:0007806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a endodeoxyribonuclease activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0140656","PMID:33836577","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal endodeoxyribonuclease activator activity","termid":"FYPO:0007806"}


id: GO:0016077
data:
  {"annotated_genes":["SJAG_03984","SJAG_03745","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87588],"is_not":false,"summary":null,"term":"GO:0016077"},{"annotations":[91451,112398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of snoRNA, small nucleolar RNA, any of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins.","definition_xrefs":["ISBN:0198506732","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0016074"],"is_obsolete":false,"name":"sno(s)RNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sRNA catabolic process","type":"narrow"},{"name":"sno(s)RNA breakdown","type":"exact"},{"name":"sno(s)RNA catabolism","type":"exact"},{"name":"sno(s)RNA degradation","type":"exact"},{"name":"snoRNA catabolic process","type":"narrow"}],"termid":"GO:0016077","terms_by_termid":{"GO:0016077":null,"GO:0071036":null}}


id: PBO:0030477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_serine_level","termid":"PBO:0030477"}


id: PR:P26359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msh3 gene.","definition_xrefs":["UniProtKB:P26359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein msh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.03","synonyms":[{"name":"MutS protein homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-msh3","type":"exact"},{"name":"mating-type switching protein swi4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P26359"}


id: FYPO:0007180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is detected abnormally distributed throughout the cell cortex during mitosis. The protein may normally be restricted to part of the cell cortex, or not normally located in the cell cortex at all.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized protein distributed in cell cortex during mitosis","synonyms":[{"name":"mislocalised protein distributed in cell cortex during mitosis","type":"exact"},{"name":"mislocalized protein distributed at cell surface during mitosis","type":"related"},{"name":"mislocalized protein distributed in cell cortex during mitosis during vegetative growth","type":"exact"},{"name":"mislocalized protein distributed in cell cortex during mitotic M phase","type":"related"},{"name":"mislocalized protein distributed in cell cortex during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007180"}


id: PBO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile leukoencephalopathy","termid":"PBO:0001148"}


id: GO:0060276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction in response to a build-up of toxins in the environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of stationary phase","termid":"GO:0060274"},{"relation_name":"part_of","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of stationary phase in response to toxin","termid":"GO:0060276"}


id: PBO:0042095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 167","termid":"PBO:0042095"}


id: GO:0008381
data:
  {"annotated_genes":["SJAG_02019","SJAG_02532","SJAG_04668","SJAG_05229","SJAG_05342","SJAG_02877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94882],"is_not":false,"summary":null,"term":"GO:0008381"},{"annotations":[102946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[113057,91608,91551,98824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an monoatomic ion by a channel that opens in response to a mechanical stress.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02019":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05229":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mechanosensitive monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:1.A.23.2.1","GO:0022833"],"synonyms":[{"name":"mechanically gated channel activity","type":"exact"},{"name":"mechanically-gated channel activity","type":"exact"},{"name":"mechanically-gated ion channel activity","type":"exact"},{"name":"mechanosensitive ion channel activity","type":"broad"}],"termid":"GO:0008381","terms_by_termid":{"GO:0008381":null,"GO:0015275":null,"GO:0140135":null}}


id: PBO:0058055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4276","termid":"PBO:0058055"}


id: MONDO:0044748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of cattle caused by parasitization of the red blood cells by bacteria of the genus ANAPLASMA.","definition_xrefs":["MESH:D000712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease, non-human animal","termid":"MONDO:0700113"},{"relation_name":"is_a","term_name":"tick-borne infectious disease, non-human animal","termid":"MONDO:0700201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplasmosis in cattle","synonyms":[{"name":"Anaplasmoses","type":"related"}],"termid":"MONDO:0044748","xrefs":{"Monarch":{"xref_id":"0044748"}}}


id: PBO:0088239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Stm1","termid":"PBO:0088239"}


id: PBO:0077766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 2","termid":"PBO:0077766"}


id: GO:0033214
data:
  {"annotated_genes":["SJAG_02735","SJAG_02834"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61571,61661,109924,109925],"is_not":false,"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A process in which iron (Fe3+) is solubilized by ferric iron-specific chelators, known as siderophores, excreted by a cell; the iron-siderophore complex is then transported into the cell by specific cell surface receptors.","definition_xrefs":["PMID:16963626","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0098771","GO:0006810"],"is_obsolete":false,"name":"siderophore-dependent iron import into cell","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015688","GO:0033213"],"synonyms":[{"name":"iron assimilation by capture and transport","type":"related"},{"name":"iron assimilation by chelation and transport","type":"exact"},{"name":"iron chelate transport","type":"broad"}],"termid":"GO:0033214","terms_by_termid":{"GO:0033214":null}}


id: GO:1990386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Advancement of the mitotic cleavage furrow from the outside of the cell inward towards the center of the cell. The cleavage furrow acts as a 'purse string' which draws tight to separate daughter cells during mitotic cytokinesis and partition the cytoplasm between the two daughter cells. The furrow ingresses until a cytoplasmic bridge is formed.","definition_xrefs":["GOC:kmv","PMID:12707312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleavage furrow ingression","termid":"GO:0036090"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"mitotic cleavage furrow ingression","termid":"GO:1990386"}


id: GO:0102443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(1-) + a (2S)-2-hydroxycarboxylate = NADH(2-) + H+ + a 2-oxo carboxylate.","definition_xrefs":["GOC:pz","EC:1.1.1.337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-2-hydroxycarboxylate dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:34555","MetaCyc:RXN-13927"],"termid":"GO:0102443"}


id: PBO:0043824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Q","termid":"PBO:0043824"}


id: MONDO:0011591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 9q13-q22.","definition_xrefs":["DOID:0110246","PMID:11179024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 26 multiple types","secondary_identifiers":["MEDGEN:381316","UMLS:C1854003","OMIM:605749","MESH:C565298"],"synonyms":[{"name":"CTRCT26","type":"exact"},{"name":"cataract 26, multiple types","type":"related"},{"name":"cataract, autosomal recessive, early-onset, pulverulent","type":"related"}],"termid":"MONDO:0011591","xrefs":{"Monarch":{"xref_id":"0011591"}}}


id: PBO:0085797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; conserved among S. cerevisiae strains, not conserved in closely related Saccharomyces species; protein detected via large-scale protein-protein interaction studies and enrichment-based proteogenomics; YJL199C is not an essential gene","termid":"PBO:0085797"}


id: FYPO:0002042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to iron ion starvation","termid":"FYPO:0003196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to iron ion starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"decreased RNA level during cellular response to iron ion depletion","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to iron starvation","type":"exact"},{"name":"decreased RNA level during iron ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to iron ion starvation","type":"exact"},{"name":"reduced RNA level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0002042"}


