# terms

id: FYPO:0004804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly does not occur. An actin fusion focus normally forms during mating at the site where the two cells will fuse.","definition_xrefs":["PMID:25825517","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal actin fusion focus assembly","termid":"FYPO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"abolished actin fusion focus assembly","synonyms":[{"name":"abolished actin fusion focus formation","type":"exact"},{"name":"actin fusion focus assembly abolished","type":"exact"}],"termid":"FYPO:0004804"}


id: PBO:0075328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 1","termid":"PBO:0075328"}


id: MONDO:0004735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Alagille syndrome (obsolete MONDO:0004735)","termid":"MONDO:0004735","xrefs":{"Monarch":{"xref_id":"0004735"}}}


id: PBO:0071040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 42","termid":"PBO:0071040"}


id: MONDO:0019805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Twin twin transfusion syndrome (TTTS) is a rare condition seen in twin monochorionic pregnancies, typically developing during the 15-26 week gestation period and usually due to unbalanced intertwin placental anastomoses, where an unequal exchange of blood between twins causes oligohydramnios in one sac and polyhydramnios in the other which can lead to a high perinatal mortality rate and a high rate of disability in survivors if left untreated","definition_xrefs":["Orphanet:95431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal anemia","termid":"MONDO:0001240"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"twin to twin transfusion syndrome","secondary_identifiers":["DOID:13576","SCTID:13404009","MedDRA:10058328","NCIT:C113824","NORD:2021","GARD:325","MEDGEN:777055","icd11.foundation:850604370","UMLS:C2909036","MESH:D005330","EFO:1001221"],"synonyms":[{"name":"Feto-fetal transfusion syndrome","type":"exact"},{"name":"Fetofetal transfusion syndrome","type":"related"},{"name":"TTTS","type":"related"},{"name":"Twin Anemia Polycythemia Sequence","type":"exact"},{"name":"Twin to twin transfusion","type":"exact"},{"name":"Twin-Twin transfusion syndrome","type":"exact"},{"name":"Twin-to-twin blood transfer","type":"exact"},{"name":"fetal blood loss from fetal hemorrhage into co-twin","type":"exact"},{"name":"fetal hemorrhage into co-twin","type":"exact"},{"name":"fetal transfusion syndrome","type":"related"},{"name":"foetal blood loss from foetal haemorrhage into co-twin","type":"exact"},{"name":"foetal haemorrhage into co-twin","type":"exact"},{"name":"foetal transfusion syndrome","type":"related"},{"name":"placental transfusion syndrome","type":"exact"},{"name":"stuck Twin syndrome","type":"exact"},{"name":"twin-to-twin transfusion syndrome","type":"exact"}],"termid":"MONDO:0019805","xrefs":{"Monarch":{"xref_id":"0019805"}}}


id: PR:Q09839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16C9.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C9.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.01c","synonyms":[{"name":"Spom972h-SPAC16C9.01c","type":"exact"}],"termid":"PR:Q09839"}


id: GO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a killer cell immunoglobulin-like receptor capable of cellular activation.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"stimulatory killer cell immunoglobulin-like receptor signaling pathway","synonyms":[{"name":"stimulatory KIR signaling pathway","type":"exact"},{"name":"stimulatory killer cell immunoglobulin-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002222"}


id: PBO:0087361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation protein required for prospore membrane formation; required for prospore membrane formation at selected spindle poles; ensures functionality of all four spindle pole bodies during meiosis II; not required for meiotic recombination or meiotic chromosome segregation","termid":"PBO:0087361"}


id: PBO:0039056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 5","termid":"PBO:0039056"}


id: MONDO:0016319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005244"],"is_obsolete":false,"name":"congenital insensitivity to pain with hyperhidrosis","secondary_identifiers":["GARD:20514","Orphanet:217399","MEDGEN:1830087","UMLS:C5679817"],"synonyms":[{"name":"congenital absence of pain with hyperhidrosis","type":"exact"},{"name":"congenital analgesia with hyperhidrosis","type":"exact"},{"name":"congenital indifference to pain with hyperhidrosis","type":"exact"}],"termid":"MONDO:0016319","xrefs":{"Monarch":{"xref_id":"0016319"}}}


id: MONDO:0009999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive Robinow syndrome (RRS) is the less common type of Robinow syndrome (RS) characterized by short-limb dwarfism, costovertebral segmentation defects and abnormalities of the head, face and external genitalia.","definition_xrefs":["Orphanet:1507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Robinow syndrome","termid":"MONDO:0019978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive Robinow syndrome","secondary_identifiers":["DOID:0060764","GARD:16568","MEDGEN:1770070","MESH:C535863","UMLS:C5399974","icd11.foundation:793292660","OMIM:268310"],"synonyms":[{"name":"COVESDEM syndrome","type":"exact"},{"name":"Covesdem syndrome","type":"related"},{"name":"Covesdem syndrome, formerly","type":"related"},{"name":"RRS","type":"exact"},{"name":"Robinow syndrome, autosomal recessive","type":"exact"},{"name":"Robinow syndrome, autosomal recessive, with Brachy-syn-polydactyly","type":"related"},{"name":"Robinow syndrome, autosomal recessive, with aplasia/hypoplasia of phalanges and metacarpals/metatarsals","type":"related"},{"name":"costovertebral segmentation defect with mesomelia","type":"related"},{"name":"costovertebral segmentation defect with mesomelia, formerly","type":"related"},{"name":"costovertebral segmentation defect-mesomelia syndrome","type":"exact"}],"termid":"MONDO:0009999","xrefs":{"Monarch":{"xref_id":"0009999"}}}


id: GO:0032207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a recombinational process involved in the maintenance of proper telomeric length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"},{"relation_name":"regulates","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200","GO:0006310"],"is_obsolete":false,"name":"regulation of telomere maintenance via recombination","termid":"GO:0032207"}


id: PBO:0005784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex alpha subunit Tfg1 (predicted)","termid":"PBO:0005784"}


id: GO:0141150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of nitric oxide-cGMP mediated signal transduction.","definition_xrefs":["PMID:14615391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nitric oxide mediated signal transduction","termid":"GO:0010750"},{"relation_name":"is_a","term_name":"positive regulation of cGMP-mediated signaling","termid":"GO:0010753"},{"relation_name":"is_a","term_name":"regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141149"},{"relation_name":"positively_regulates","term_name":"nitric oxide-cGMP-mediated signaling","termid":"GO:0038060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141150"}


id: MONDO:0009194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare progressive disease that begins as a primary Epstein-Barr virus (EBV) infection. In this type of infection, the body makes too many lymphocytes (lymphoproliferative disease) for a period of more than 6 months duration. Lymphocytes are a type of white blood cell. They are an importantpart ofthe immune system because they help fight off diseases and protect the body from infection byproducing antibodies against viruses or bacteria and regulating immune responses. In CAEBV there are many antibodies againstEBV in the blood.Most people (about 95% of adults) get infected with EBV at some point in their lives, and never have any health problems.However, EBV can cause infectiousmononucleosis and other illnesses, and has a role in various autoimmune diseases and some types of cancer. While most infections occurring during childhood do not cause any symptoms,EBV infection in adolescents or young adults can often result in mononucleosis.After an EBV infection, the virus becomes latent (inactive) in the body, and, in some cases, the virus may reactivate. This does not always cause symptoms, but people with weakened immune systems are more likely to develop symptoms if EBV reactivates.In rare cases, people infected with EBV develop chronic active EBV virus infection(CAEBV) without apparent immunodeficiency. Most cases of CAEBV have been reported from Japan. These patientshave some of the complications found in otherwise-healthy patients with acute EBV infection, but unlike healthy patients, these complications persist and progress. Symptoms of CAEBV most often include fever, liverdysfunction, an enlarged spleen (splenomegaly), swollen lymph nodes (lymphadenopathy), and low numbers of platelets (thrombocytopenia) as well as high EBV-DNA load in the blood. Other features that appear in more than 10% of patients include enlarged liver (hepatomegaly), anemia, hypersensitivity to mosquito bites, rash, oral ulcers, hemophagocytic syndrome, coronary artery aneurysms, liver failure, lymphoma, and interstitial pneumonia. While the cause is yet unknown, researchers have identified defects in T cells or natural killer (NK) cells activity which results in a decreased defense against the EBV in people with CAEBV.It is important to note that the fatigue and malaise from acute infectious mononucleosis (IM)varies from mild symptoms lasting only a few weeks, to more severe symptoms of fatigue that can persist for several months, or even up to a year or more in up to 10% of patients (which may be considered a less severe form of chronicEBV infection). The persistence of fatigue that is seen in some patients after acute IM would lead some people to believe that EBV may also cause cases of chronic fatigue syndrome (CFS). However, no convincing link has been found between EBV and CFS.Hematopoietic stemcell transplantation has shown promise in the treatment of CAEBV.","definition_xrefs":["GARD:0009534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency 32B","secondary_identifiers":["UMLS:C4016741","Orphanet:2566","DOID:0111985","MEDGEN:865178","NANDO:2200808","GARD:9534","OMIM:614894","OMIM:226990"],"synonyms":[{"name":"CAEBV infection","type":"related"},{"name":"CAEBV syndrome","type":"exact"},{"name":"CEBV","type":"related"},{"name":"Epstein-Barr VIRUS, susceptibility to chronic infection by","type":"related"},{"name":"IMD32B","type":"exact"},{"name":"IRF8 deficiency, autosomal recessive","type":"exact"},{"name":"chronic EBV infection syndrome","type":"exact"},{"name":"chronic Epstein-Barr virus infection syndrome","type":"exact"},{"name":"chronic active Epstein-Barr disease","type":"related"},{"name":"chronic active Epstein-Barr virus infection","type":"related"},{"name":"immunodeficiency 32B","type":"exact"},{"name":"immunodeficiency 32B, monocyte and dendritic cell deficiency, autosomal recessive","type":"exact"},{"name":"immunodeficiency 32B, monocyte, Dendritic cell, and natural Killer cell deficiency, autosomal recessive","type":"exact"},{"name":"monocyte and dendritic cell deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0009194","xrefs":{"Monarch":{"xref_id":"0009194"}}}


id: MONDO:0013316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Occult macular dystrophy is a rare, genetic retinal dystrophy disease characterized by bilateral progressive decline of visual acuity, due to retinal dysfunction confined only to the macula, associated with normal fundus and fluorescein angiograms and severely attenuated focal macular and multifocal electroretinograms.","definition_xrefs":["Orphanet:247834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"occult macular dystrophy","secondary_identifiers":["DOID:0050578","icd11.foundation:863463706","MEDGEN:462183","GARD:17200","NANDO:1200934","OMIM:613587","UMLS:C3150833","ICD10CM:H35.5"],"synonyms":[{"name":"OCMD","type":"exact"},{"name":"OMD","type":"exact"},{"name":"Omd","type":"related"},{"name":"occult macular dystrophy","type":"exact"}],"termid":"MONDO:0013316","xrefs":{"Monarch":{"xref_id":"0013316"}}}


id: PBO:0082530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-1 has a paralog, ASP3-3, that arose from a segmental duplication","termid":"PBO:0082530"}


id: GO:0048372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a lateral mesoderm cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"},{"relation_name":"part_of","term_name":"lateral mesodermal cell differentiation","termid":"GO:0048371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesodermal cell fate commitment","synonyms":[{"name":"lateral mesoderm cell fate commitment","type":"exact"},{"name":"lateral plate mesoderm cell fate commitment","type":"exact"},{"name":"lateral plate mesodermal cell fate commitment","type":"exact"}],"termid":"GO:0048372"}


id: FYPO:0004582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but its occurrence is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","termid":"FYPO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000631","FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"increased cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"increased mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"increased mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"increased nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0004582"}


id: PBO:0044084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A3","termid":"PBO:0044084"}


id: MONDO:1011842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granule cell type cerebellar hypoplasia, non-human animal","secondary_identifiers":["OMIA:000427"],"termid":"MONDO:1011842","xrefs":{"Monarch":{"xref_id":"1011842"}}}


id: PBO:0076984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 2","termid":"PBO:0076984"}


id: PBO:0047272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member D","termid":"PBO:0047272"}


id: PBO:0047314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 3","termid":"PBO:0047314"}


id: GO:0141143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts cell adhesion to the extracellular matrix in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22534208","PMID:30345086"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated disruption of host cell adhesion to extracellular matrix (obsolete GO:0141143)","synonyms":[{"name":"disruption by symbiont of host cell adhesion to extracellular matrix","type":"exact"}],"termid":"GO:0141143"}


id: GO:0043949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which modulates the frequency, rate or extent of cAMP-mediated signaling.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cAMP-mediated signaling","termid":"GO:0019933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cAMP-mediated signaling","synonyms":[{"name":"regulation of cAMP-mediated signalling","type":"exact"}],"termid":"GO:0043949"}


id: FYPO:0001629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-methionine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular methionine level","termid":"FYPO:0001639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar methionine level","synonyms":[{"name":"normal level of methionine in vacuole","type":"exact"},{"name":"normal vacuolar L-methionine level","type":"exact"},{"name":"normal vacuolar methionine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar methionine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001629"}


id: GO:0006341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin insulator sequence binding (obsolete GO:0006341)","synonyms":[{"name":"chromatin insulator sequence binding","type":"exact"}],"termid":"GO:0006341"}


id: PBO:0073605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shroom family member 4","termid":"PBO:0073605"}


id: GO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac chamber from unspecified parts. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber formation","synonyms":[{"name":"heart chamber formation","type":"exact"}],"termid":"GO:0003207"}


id: GO:0002614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of monocyte antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of monocyte antigen processing and presentation","termid":"GO:0002613"},{"relation_name":"negatively_regulates","term_name":"monocyte antigen processing and presentation","termid":"GO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte antigen processing and presentation","synonyms":[{"name":"down regulation of monocyte antigen processing and presentation","type":"exact"},{"name":"down-regulation of monocyte antigen processing and presentation","type":"exact"},{"name":"downregulation of monocyte antigen processing and presentation","type":"exact"},{"name":"inhibition of monocyte antigen processing and presentation","type":"narrow"}],"termid":"GO:0002614"}


id: MONDO:0005342
data:
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id: PBO:0077894
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id: PBO:0064976
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id: MONDO:0018043
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id: MONDO:0013071
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id: PBO:0079283
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id: MONDO:0032730
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id: FYPO:0002273
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id: PBO:0074750
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id: FYECO:0000234
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id: PBO:0061389
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id: GO:0072521
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id: PBO:0077704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin I1, slow skeletal type","termid":"PBO:0077704"}


id: PBO:0035907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-C-shaped_vegetative_cell","termid":"PBO:0035907"}


id: GO:1905248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of memory.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25905804"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of memory (obsolete GO:1905248)","synonyms":[{"name":"modulation of memory","type":"narrow"}],"termid":"GO:1905248"}


id: PBO:0063650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 7","termid":"PBO:0063650"}


id: GO:0009994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized immature germ cell acquires the specialized features of a mature female gamete.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte differentiation","synonyms":[{"name":"oocyte cell differentiation","type":"exact"}],"termid":"GO:0009994"}


id: PBO:0059419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 5","termid":"PBO:0059419"}


id: MONDO:0007075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital alacrima","termid":"MONDO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"alacrima, congenital, autosomal dominant","secondary_identifiers":["UMLS:C4310836","MESH:C566307","MEDGEN:934803","OMIM:103420","GARD:18165"],"synonyms":[{"name":"alacrima, congenital","type":"related"},{"name":"alacrimia congenita","type":"related"},{"name":"alacrimia congenita, autosomal dominant","type":"related"}],"termid":"MONDO:0007075","xrefs":{"Monarch":{"xref_id":"0007075"}}}


id: GO:0072328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alkene binding","termid":"GO:0072328"}


id: PR:O94392
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2H10.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C2H10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2H10.01","synonyms":[{"name":"Spom972h-SPAC2H10.01","type":"exact"}],"termid":"PR:O94392"}


id: GO:0032170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane at the junction between the mother cell and a pseudohyphal projection; composed of septins as well as septin-associated proteins.","definition_xrefs":["PMID:16151244","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"pseudohyphal septin ring","termid":"GO:0032170"}


id: PBO:0080570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDFY3 antisense RNA 2","termid":"PBO:0080570"}


id: GO:1900453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of long term synaptic depression.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic depression","termid":"GO:1900452"},{"relation_name":"negatively_regulates","term_name":"long-term synaptic depression","termid":"GO:0060292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of long-term synaptic depression","synonyms":[{"name":"down regulation of LTD","type":"related"},{"name":"down regulation of long term depression","type":"broad"},{"name":"down regulation of long term synaptic depression","type":"exact"},{"name":"down-regulation of LTD","type":"related"},{"name":"down-regulation of long term depression","type":"broad"},{"name":"down-regulation of long term synaptic depression","type":"exact"},{"name":"downregulation of LTD","type":"related"},{"name":"downregulation of long term depression","type":"broad"},{"name":"downregulation of long term synaptic depression","type":"exact"},{"name":"inhibition of LTD","type":"related"},{"name":"inhibition of long term depression","type":"broad"},{"name":"inhibition of long term synaptic depression","type":"narrow"},{"name":"negative regulation of LTD","type":"related"},{"name":"negative regulation of long term depression","type":"broad"},{"name":"negative regulation of long term synaptic depression","type":"related"}],"termid":"GO:1900453"}


id: PBO:0028454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate","termid":"PBO:0028454"}


id: GO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which ferric-hydroxamate, the iron-bound form of the iron chelator hydroxamate, is transported into the cell by specific cell surface receptors.","definition_xrefs":["PMID:23192658","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-dependent iron import into cell","termid":"GO:0033214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0098771","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ferric-hydroxamate import into cell","synonyms":[{"name":"ferric-hydroxamate transport","type":"broad"}],"termid":"GO:0015687"}


id: PBO:0041375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 50","termid":"PBO:0041375"}


id: MONDO:0020542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant Sertoli-Leydig cell tumor of ovary is a rare malignant sex cord stromal tumor of ovary occurring typically in young women and characterized by manifestations of androgen excess (hirsutism, hair loss, amenorrhea, or oligomenorrhea), when functional.","definition_xrefs":["Orphanet:99916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant sex cord stromal tumor of ovary","termid":"MONDO:0018172"},{"relation_name":"is_a","term_name":"ovarian Sertoli-Leydig cell tumor","termid":"MONDO:0036595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant Sertoli-Leydig cell tumor of ovary","secondary_identifiers":["GARD:5495","ICD9:239.5","UMLS:C5574973","SCTID:237795006","MEDGEN:1825991"],"synonyms":[{"name":"Androblastoma","type":"exact"},{"name":"Arrhenoblastoma","type":"exact"},{"name":"malignant Sertoli-Leydig cell tumor of the ovary","type":"related"},{"name":"malignant Sertoli-Leydig cell tumour of the ovary","type":"related"},{"name":"malignant ovarian Sertoli-Leydig cell tumor","type":"exact"},{"name":"malignant ovarian Sertoli-Leydig cell tumour","type":"exact"},{"name":"malignant ovarian sertoli-Leydig cell tumor","type":"related"},{"name":"malignant ovarian sertoli-Leydig cell tumour","type":"related"},{"name":"ovarian Sertoli-Leydig cell cancer","type":"exact"},{"name":"ovarian Sertoli-Leydig cell tumor, malignant","type":"exact"},{"name":"ovarian malignant Sertoli-Leydig cell tumor","type":"exact"},{"name":"ovarian malignant Sertoli-Leydig cell tumour","type":"exact"},{"name":"ovarian sertoli-Leydig cell tumor, malignant","type":"exact"},{"name":"virilizing ovarian tumor","type":"exact"},{"name":"virilizing ovarian tumour","type":"exact"}],"termid":"MONDO:0020542","xrefs":{"Monarch":{"xref_id":"0020542"}}}


id: PBO:0067889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 191","termid":"PBO:0067889"}


id: GO:1903626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:2001740","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"positively_regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA catabolic process","synonyms":[{"name":"activation of DNA breakdown","type":"narrow"},{"name":"activation of DNA catabolic process","type":"narrow"},{"name":"activation of DNA catabolism","type":"narrow"},{"name":"activation of DNA degradation","type":"narrow"},{"name":"positive regulation of DNA breakdown","type":"exact"},{"name":"positive regulation of DNA catabolism","type":"exact"},{"name":"positive regulation of DNA degradation","type":"exact"},{"name":"up regulation of DNA breakdown","type":"exact"},{"name":"up regulation of DNA catabolic process","type":"exact"},{"name":"up regulation of DNA catabolism","type":"exact"},{"name":"up regulation of DNA degradation","type":"exact"},{"name":"up-regulation of DNA breakdown","type":"exact"},{"name":"up-regulation of DNA catabolic process","type":"exact"},{"name":"up-regulation of DNA catabolism","type":"exact"},{"name":"up-regulation of DNA degradation","type":"exact"},{"name":"upregulation of DNA breakdown","type":"exact"},{"name":"upregulation of DNA catabolic process","type":"exact"},{"name":"upregulation of DNA catabolism","type":"exact"},{"name":"upregulation of DNA degradation","type":"exact"}],"termid":"GO:1903626"}


id: MONDO:0003509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choriocarcinoma (disease) that involves the pineal body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pineal area germ cell neoplasm","termid":"MONDO:0002073"},{"relation_name":"is_a","term_name":"choriocarcinoma of the central nervous system","termid":"MONDO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal region choriocarcinoma","secondary_identifiers":["NCIT:C6759","UMLS:C1335414","MEDGEN:233327","DOID:5553"],"synonyms":[{"name":"choriocarcinoma of pineal area","type":"exact"},{"name":"choriocarcinoma of pineal region","type":"exact"},{"name":"choriocarcinoma of the pineal area","type":"exact"},{"name":"choriocarcinoma of the pineal region","type":"exact"},{"name":"pineal area choriocarcinoma","type":"exact"},{"name":"pineal choriocarcinoma","type":"exact"}],"termid":"MONDO:0003509","xrefs":{"Monarch":{"xref_id":"0003509"}}}


id: GO:0061110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a dense core granule. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the dense core granule.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"dense core granule biogenesis","termid":"GO:0061110"}


id: GO:0048650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals, having the potential to develop any of several distinct developmental paths, have their individual developmental fate determined in response to environmental cues. Individuals with distinct developmental fates perform different functions in a colony of social insects.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caste determination","termid":"GO:0048648"},{"relation_name":"is_a","term_name":"polyphenic determination, influence by environmental factors","termid":"GO:0048651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caste determination, influence by environmental factors","termid":"GO:0048650"}


id: PBO:0034213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_mimicry_relationship_with","termid":"PBO:0034213"}


id: PBO:0031230
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_cytokinetic_cell_separation","termid":"PBO:0031230"}


id: MONDO:0014251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melioidosis, susceptibility to","secondary_identifiers":["MEDGEN:816255","OMIM:615557","UMLS:C3809925"],"synonyms":[{"name":"melioidosis, resistance to","type":"related"},{"name":"melioidosis, susceptibility to","type":"exact"},{"name":"susceptibility to melioidosis","type":"related"}],"termid":"MONDO:0014251","xrefs":{"Monarch":{"xref_id":"0014251"}}}


id: MONDO:0003571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete labyrinthine dysfunction (obsolete MONDO:0003571)","secondary_identifiers":["ICD10CM:H83.2","ICD9:386.5","SCTID:5239005","ICD9:386.50","ICD9:386.58","DOID:566"],"termid":"MONDO:0003571","xrefs":{"Monarch":{"xref_id":"0003571"}}}


id: PBO:0089639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0C","termid":"PBO:0089639"}


id: MONDO:0012928
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85985],"is_not":false,"summary":null,"term":"MONDO:0012928"}]},"cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 42 is a pure form of hereditary spastic paraplegia characterized by slowly progressive spastic paraplegia of lower extremities with an age of onset ranging from childhood to adulthood and patients presenting with spastic gait, increased tendon reflexes in lower limbs, extensor plantar response, weakness and atrophy of lower limb muscles and, in rare cases, pes cavus. No abnormalities are noted on magnetic resonance imaging.","definition_xrefs":["Orphanet:171863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 42","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:763070001","MEDGEN:393407","UMLS:C2675528","DOID:0110794","GARD:17073","MESH:C567262","OMIM:612539"],"synonyms":[{"name":"SLC33A1 autosomal dominant pure spastic paraplegia","type":"exact"},{"name":"SPG42","type":"exact"},{"name":"autosomal dominant pure spastic paraplegia caused by mutation in SLC33A1","type":"exact"},{"name":"autosomal dominant spastic paraplegia 42","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 42","type":"exact"},{"name":"hereditary spastic paraplegia type 42","type":"exact"},{"name":"spastic paraplegia 42, autosomal dominant","type":"related"}],"termid":"MONDO:0012928","terms_by_termid":{"MONDO:0012928":null},"xrefs":{"Monarch":{"xref_id":"0012928"}}}


id: PBO:0048035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and SPRY domain containing 2","termid":"PBO:0048035"}


id: PBO:0056154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macoilin 1","termid":"PBO:0056154"}


id: MONDO:0022622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation syndrome type 4","secondary_identifiers":["GARD:1174"],"synonyms":[{"name":"CDG syndrome type 4","type":"exact"},{"name":"congenital disorder of glycosylation syndrome type 4","type":"exact"}],"termid":"MONDO:0022622","xrefs":{"Monarch":{"xref_id":"0022622"}}}


id: PR:Q10221
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng8 gene.","definition_xrefs":["UniProtKB:Q10221","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.14c","synonyms":[{"name":"Spom972h-rng8","type":"exact"}],"termid":"PR:Q10221"}


id: PBO:0027094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_rDNA_copy_number","termid":"PBO:0027094"}


id: PBO:0053621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 663","termid":"PBO:0053621"}


id: PBO:0031760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_assembly","termid":"PBO:0031760"}


id: FYPO:0004870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of mitotic cell cycle arrest or delay due to regulation by the mitotic G2 DNA damage checkpoint is shorter than normal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of mitotic G2 DNA damage checkpoint","synonyms":[{"name":"reduced duration of mitotic G2 DNA damage checkpoint","type":"exact"},{"name":"decreased duration of mitotic G2 DNA damage checkpoint activation","type":"exact"},{"name":"decreased duration of mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"decreased duration of G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004870"}


id: GO:0090081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of canonical Wnt signaling pathway that regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell, followed by relaying of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heart induction by regulation of canonical Wnt signaling pathway (obsolete GO:0090081)","synonyms":[{"name":"regulation of heart induction by regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of heart induction by regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of heart induction by regulation of canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0090081"}


id: GO:0016665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, an iron-sulfur protein, oxygen, NAD or NADP.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on other nitrogenous compounds as donors, other acceptors (obsolete GO:0016665)","synonyms":[{"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, other acceptors","type":"exact"}],"termid":"GO:0016665"}


id: PBO:0047731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 like","termid":"PBO:0047731"}


id: GO:0004025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+, requiring the presence of iron.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol dehydrogenase (NAD+) activity, iron-dependent (obsolete GO:0004025)","synonyms":[{"name":"alcohol dehydrogenase activity, iron-dependent","type":"broad"}],"termid":"GO:0004025"}


id: PBO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC12 antisense RNA 1","termid":"PBO:0060192"}


id: PBO:0079929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin related modifier 1","termid":"PBO:0079929"}


id: PBO:0089728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Psu2","termid":"PBO:0089728"}


id: MONDO:0006048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic neuroendocrine tumor (obsolete MONDO:0006048)","termid":"MONDO:0006048","xrefs":{"Monarch":{"xref_id":"0006048"}}}


id: PBO:0064249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plectin","termid":"PBO:0064249"}


id: PBO:0053910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1204","termid":"PBO:0053910"}


id: PBO:0066203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 4","termid":"PBO:0066203"}


id: GO:0030319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent inorganic anions at the level of a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular di-, tri-valent inorganic anion homeostasis (obsolete GO:0030319)","synonyms":[{"name":"cellular di-, tri-valent inorganic anion homeostasis","type":"exact"}],"termid":"GO:0030319"}


id: PBO:0047138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM174A divergent transcript","termid":"PBO:0047138"}


id: MONDO:0010030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder in which immune cells attack and destroy the glands that produce tears and saliva. Sjögren syndrome is also associated with rheumatic disorders such as rheumatoid arthritis or systemic lupus erythematosus. The hallmark symptoms of Sjögren syndrome are dry mouth and dry eyes. In addition, Sjogren syndrome may cause skin, nose, and vaginal dryness. It also may affect other organs of the body including the kidneys, blood vessels, lungs, liver, pancreas, and brain","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of exocrine system","termid":"MONDO:0000586"},{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005046"],"is_obsolete":false,"name":"Sjogren syndrome","secondary_identifiers":["Orphanet:378","Orphanet:289390","NANDO:2200420","MESH:D012859","DOID:12894","NANDO:1200279","GARD:10252","ICD9:710.2","SCTID:83901003","UMLS:C1527336","MEDGEN:282890","EFO:0000699","icd11.foundation:899463360","NANDO:1200280","OMIM:270150","NCIT:C26883"],"synonyms":[{"name":"Sjogren syndrome","type":"exact"},{"name":"Sjogren's syndrome","type":"related"},{"name":"Sjögren syndrome","type":"exact"},{"name":"Sjögren-Gougerot syndrome","type":"exact"},{"name":"primary Sjogren-Gougerot syndrome","type":"exact"},{"name":"primary Sjögren syndrome","type":"related"},{"name":"primary Sjögren-Gougerot syndrome","type":"exact"},{"name":"sicca syndrome","type":"exact"},{"name":"syndrome, Sjogren's","type":"exact"},{"name":"xerodermosteosis","type":"exact"}],"termid":"MONDO:0010030","xrefs":{"Monarch":{"xref_id":"0010030"}}}


id: GO:1900727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of osmoregulated periplasmic glucan.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"osmoregulated periplasmic glucan metabolic process","termid":"GO:1900725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"osmoregulated periplasmic glucan biosynthetic process","synonyms":[{"name":"osmoregulated periplasmic glucan anabolism","type":"exact"},{"name":"osmoregulated periplasmic glucan biosynthesis","type":"exact"},{"name":"osmoregulated periplasmic glucan formation","type":"exact"},{"name":"osmoregulated periplasmic glucan synthesis","type":"exact"}],"termid":"GO:1900727"}


id: PBO:0088680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi mannan polymerase I complex subunit Anp1","termid":"PBO:0088680"}


id: FYPO:0002545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea (obsolete FYPO:0002545)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to HU","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during cellular response to hydroxyurea","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002545"}


id: GO:0009109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of coenzymes, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme catabolic process (obsolete GO:0009109)","synonyms":[{"name":"coenzyme and prosthetic group catabolic process","type":"broad"},{"name":"coenzyme and prosthetic group catabolism","type":"broad"},{"name":"coenzyme breakdown","type":"exact"},{"name":"coenzyme catabolism","type":"exact"},{"name":"coenzyme degradation","type":"exact"}],"termid":"GO:0009109"}


id: PBO:0045703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 2","termid":"PBO:0045703"}


id: PBO:0076924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Dp-1","termid":"PBO:0076924"}


id: PBO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II Gls2","termid":"PBO:0001185"}


id: PBO:0054688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2097","termid":"PBO:0054688"}


id: GO:0090536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and a Tip5 homolog. In mammals, NoRC is involved in regulation of transcription from RNAP I and RNA polymerase III promoters.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"NoRC complex","termid":"GO:0090536"}


id: PBO:0078450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 3","termid":"PBO:0078450"}


id: GO:0032878
data:
  {"annotated_genes":["SJAG_04666","SJAG_00028","SJAG_01373","SJAG_00610","SJAG_00596","SJAG_03048","SJAG_00845","SJAG_00333","SJAG_02760","SJAG_00317","SJAG_04509","SJAG_02392","SJAG_04461","SJAG_04522","SJAG_01376","SJAG_01794","SJAG_04980","SJAG_03126","SJAG_00661","SJAG_01799","SJAG_03581","SJAG_00236","SJAG_03637","SJAG_02536","SJAG_02022"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87111,90141,92676,95054,99387,99579,108571],"is_not":false,"summary":null,"term":"GO:0032878"},{"annotations":[90168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[106770,111608,102878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"},{"annotations":[115719,106771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"},{"annotations":[92937,104518,102879,99361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[102880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"},{"annotations":[93781,111105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000114"},{"annotations":[92938,101572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000099"},{"annotations":[93782,117910,112184,103710,94858,90344,99364,104521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000100"},{"annotations":[91627,102027,87112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00236":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_01376":null,"SJAG_01794":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02760":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment or maintenance of cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032878","terms_by_termid":{"GO:0032878":null,"GO:0061173":null,"GO:0061361":null,"GO:1904846":null,"GO:2000099":null,"GO:2000100":null,"GO:2000114":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0017449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasite_of","termid":"PBO:0017449"}


id: PBO:0108516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L and NuA4 histone acetyltransferase complex ING family/PHD-type zinc finger subunit Png2","termid":"PBO:0108516"}


id: GO:0018766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrophloroglucinol + OH- = 3-hydroxy-5-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r0008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"dihydrophloroglucinol hydrolase activity","secondary_identifiers":["KEGG_REACTION:R07831","MetaCyc:R6-RXN"],"termid":"GO:0018766"}


id: PBO:0052825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 125, pseudogene","termid":"PBO:0052825"}


id: GO:1904153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["GOC:PARL","PMID:18555783","GOC:bf","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein exit from endoplasmic reticulum","termid":"GO:0070862"},{"relation_name":"is_a","term_name":"regulation of retrograde protein transport, ER to cytosol","termid":"GO:1904152"},{"relation_name":"negatively_regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"down regulation of protein dislocation from ER","type":"exact"},{"name":"down regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"down regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"down-regulation of protein dislocation from ER","type":"exact"},{"name":"down-regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"down-regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"downregulation of protein dislocation from ER","type":"exact"},{"name":"downregulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"downregulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"inhibition of protein dislocation from ER","type":"narrow"},{"name":"inhibition of retrograde protein transport, ER to cytosol","type":"narrow"},{"name":"inhibition of retrograde protein transport, endoplasmic reticulum to cytosol","type":"narrow"},{"name":"negative regulation of protein dislocation from ER","type":"exact"},{"name":"negative regulation of protein retrotranslocation from ER","type":"exact"},{"name":"negative regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904153"}


id: PBO:0091755
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELL","termid":"PBO:0091755"}


id: FYPO:0003784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with a septum and a nucleus in one compartment, and then die.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable septated mononucleate vegetative cell","termid":"FYPO:0002000"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, arrest with single nucleus","termid":"FYPO:0003759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000138","FYPO:0000631"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, arrest with septated mononucleate cell","synonyms":[{"name":"inviable after spore germination, single or double cell division, arrest with septated cell and single nucleus","type":"exact"},{"name":"inviable following spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"}],"termid":"FYPO:0003784"}


id: GO:0043281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of a cysteine-type endopeptidase involved in apoptosis.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cysteine-type endopeptidase activity involved in apoptotic process (obsolete GO:0043281)","synonyms":[{"name":"regulation of caspase activation","type":"narrow"},{"name":"regulation of caspase activity","type":"broad"}],"termid":"GO:0043281"}


id: GO:0032379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"positively_regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of intracellular lipid transport","synonyms":[{"name":"activation of intracellular lipid transport","type":"narrow"},{"name":"stimulation of intracellular lipid transport","type":"narrow"},{"name":"up regulation of intracellular lipid transport","type":"exact"},{"name":"up-regulation of intracellular lipid transport","type":"exact"},{"name":"upregulation of intracellular lipid transport","type":"exact"}],"termid":"GO:0032379"}


id: GO:0098529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction that targets a skeletal muscle fiber.","definition_xrefs":["GOC:mtg_OBO2OWL_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction development","termid":"GO:0007528"},{"relation_name":"part_of","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular junction development, skeletal muscle fiber","termid":"GO:0098529"}


id: GO:2000247
data:
  {"annotated_genes":["SJAG_01799","SJAG_04461","SJAG_00845","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92937,99361,102879,104518],"is_not":false,"summary":null,"term":"GO:2000247"},{"annotations":[102880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"is_a","term_name":"positive regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000771"},{"relation_name":"positively_regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007163"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"positive regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000247","terms_by_termid":{"GO:0061361":null,"GO:2000247":null}}


id: GO:0099099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ion channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["PMID:35704701","GOC:dos","Wikipedia:G_protein-gated_ion_channel"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"G-protein gated monoatomic ion channel activity","synonyms":[{"name":"G-protein gated ion channel activity","type":"broad"}],"termid":"GO:0099099"}


id: PBO:0026634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5_acetylation","termid":"PBO:0026634"}


id: PBO:0065313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 36","termid":"PBO:0065313"}


id: GO:0045214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The myofibril assembly process that results in the organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"sarcomere organization","secondary_identifiers":["GO:0006938"],"synonyms":[{"name":"sarcomere alignment","type":"exact"},{"name":"sarcomere organisation","type":"exact"}],"termid":"GO:0045214"}


id: PBO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degradation is independent of association with Pcu4-DDb1-CSN complex","termid":"PBO:0001303"}


id: MOD:00528
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 glycosylated residue","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:00528"}


id: PBO:0053643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 691","termid":"PBO:0053643"}


id: GO:0034922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxypyrene + O2 = phenanthrene-4,5-dicarboxylate + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0936"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxypyrene dioxygenase activity (obsolete GO:0034922)","termid":"GO:0034922"}


id: MONDO:0005984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatological pruritic lesion in the feet, caused by Trichophyton rubrum, T. mentagrophytes, or Epidermophyton floccosum.","definition_xrefs":["MESH:D014008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea pedis","secondary_identifiers":["SCTID:6020002","UMLS:C0040259","MEDGEN:52759","DOID:12403","EFO:0007512","ICD10CM:B35.3","ICD9:110.4"],"synonyms":[{"name":"athlete's foot","type":"exact"},{"name":"dermatophytosis of foot","type":"exact"},{"name":"dermatophytosis of pes","type":"exact"},{"name":"pes dermatophytosis","type":"exact"},{"name":"ringworm of foot","type":"related"}],"termid":"MONDO:0005984","xrefs":{"Monarch":{"xref_id":"0005984"}}}


id: PBO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.-.-.-","termid":"PBO:0000309"}


id: GO:0102545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + a phosphatidylcholine = sn-glycero-3-phosphocholine + 2 H+ + 2 a carboxylate.","definition_xrefs":["GOC:pz","MetaCyc:RXN-14899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidyl phospholipase B activity","termid":"GO:0102545"}


id: GO:0001890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.","definition_xrefs":["ISBN:068340007X","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"placenta development","synonyms":[{"name":"placental development","type":"exact"},{"name":"placentation","type":"exact"}],"termid":"GO:0001890"}


id: GO:0061659
data:
  {"annotated_genes":["SJAG_00727","SJAG_00561","SJAG_04151","SJAG_03136","SJAG_03970","SJAG_00819","SJAG_05236","SJAG_01561","SJAG_05323","SJAG_00188","SJAG_02319","SJAG_01776","SJAG_01637","SJAG_02371","SJAG_00435","SJAG_05274","SJAG_01593","SJAG_02347","SJAG_02668","SJAG_04600","SJAG_00209","SJAG_02169","SJAG_03191","SJAG_04915","SJAG_00341","SJAG_01533","SJAG_03006","SJAG_04783","SJAG_01854","SJAG_03250","SJAG_02575","SJAG_01360","SJAG_00500","SJAG_00173","SJAG_01535","SJAG_01253","SJAG_06309","SJAG_01212","SJAG_02299","SJAG_01507","SJAG_02851","SJAG_03112","SJAG_03860","SJAG_03831","SJAG_04619","SJAG_00509","SJAG_00111","SJAG_03968","SJAG_02652","SJAG_03175","SJAG_00475","SJAG_01165","SJAG_04429","SJAG_04309","SJAG_03657","SJAG_01900","SJAG_04990","SJAG_02603","SJAG_01772","SJAG_00552","SJAG_03324","SJAG_05264","SJAG_02308","SJAG_00208","SJAG_02685","SJAG_03615","SJAG_03613","SJAG_04966","SJAG_01992","SJAG_02521","SJAG_02746","SJAG_03883","SJAG_02415","SJAG_03618","SJAG_03005"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90712,104041,106353,112769],"is_not":false,"summary":null,"term":"GO:0061659"},{"annotations":[89294,108927,109424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019776"},{"annotations":[115347,117969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[93551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[88807,103535,88961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061665"},{"annotations":[90882,88755,111228,113457,87306,104404,88110,108030,88930,107162,95980,112528,116373,106112,87524,87227,95798,87440,117561,79232,104123,93552,108796,95712,105061,109381,94589,104461,100493,89101,104151,87848,102602,112796,113135,92767,114548,97737,115836,115837,107026,116333,106030,91965,100373,102587,112705,88998,98589,99443,95009,109119,103465,111953,89413,87237,102203,103536,101055,90276,95898,109120,88548,89939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[91900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin-like protein (ULP) to a substrate protein via the reaction X-ULP + S = X + S-ULP, where X is either an E2 or E3 enzyme, the X-ULP linkage is a thioester bond, and the S-ULP linkage is an isopeptide bond between the C-terminal glycine of ULP and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":75,"genes_by_uniquename":{"SJAG_00111":null,"SJAG_00173":null,"SJAG_00188":null,"SJAG_00208":null,"SJAG_00209":null,"SJAG_00341":null,"SJAG_00435":null,"SJAG_00475":null,"SJAG_00500":null,"SJAG_00509":null,"SJAG_00552":null,"SJAG_00561":null,"SJAG_00727":null,"SJAG_00819":null,"SJAG_01165":null,"SJAG_01212":null,"SJAG_01253":null,"SJAG_01360":null,"SJAG_01507":null,"SJAG_01533":null,"SJAG_01535":null,"SJAG_01561":null,"SJAG_01593":null,"SJAG_01637":null,"SJAG_01772":null,"SJAG_01776":null,"SJAG_01854":null,"SJAG_01900":null,"SJAG_01992":null,"SJAG_02169":null,"SJAG_02299":null,"SJAG_02308":null,"SJAG_02319":null,"SJAG_02347":null,"SJAG_02371":null,"SJAG_02415":null,"SJAG_02521":null,"SJAG_02575":null,"SJAG_02603":null,"SJAG_02652":null,"SJAG_02668":null,"SJAG_02685":null,"SJAG_02746":null,"SJAG_02851":null,"SJAG_03005":null,"SJAG_03006":null,"SJAG_03112":null,"SJAG_03136":null,"SJAG_03175":null,"SJAG_03191":null,"SJAG_03250":null,"SJAG_03324":null,"SJAG_03613":null,"SJAG_03615":null,"SJAG_03618":null,"SJAG_03657":null,"SJAG_03831":null,"SJAG_03860":null,"SJAG_03883":null,"SJAG_03968":null,"SJAG_03970":null,"SJAG_04151":null,"SJAG_04309":null,"SJAG_04429":null,"SJAG_04600":null,"SJAG_04619":null,"SJAG_04783":null,"SJAG_04915":null,"SJAG_04966":null,"SJAG_04990":null,"SJAG_05236":null,"SJAG_05264":null,"SJAG_05274":null,"SJAG_05323":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0019787","GO:0003824","GO:0016740","GO:0140096","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"ubiquitin-like protein ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"E3","type":"related"},{"name":"small conjugating protein ligase activity","type":"exact"}],"termid":"GO:0061659","terms_by_termid":{"GO:0019776":null,"GO:0034450":null,"GO:0061630":null,"GO:0061659":null,"GO:0061665":null,"GO:0140850":null,"GO:0140851":null}}


id: GO:0043876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-threonine (or D-allo-threonine) = glycine + acetaldehyde.","definition_xrefs":["MetaCyc:4.1.2.42-RXN","PMID:9642221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"D-threonine aldolase activity","secondary_identifiers":["EC:4.1.2.42"],"synonyms":[{"name":"D-TA","type":"exact"},{"name":"D-allo-TA","type":"exact"},{"name":"D-allo-threonine aldolase activity","type":"exact"},{"name":"DtaAS","type":"related"},{"name":"low-specificity D-threonine aldolase","type":"narrow"}],"termid":"GO:0043876"}


id: GO:0009042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + pyruvate = 3-methyl-2-oxobutanoate + L-alanine.","definition_xrefs":["RHEA:22912","EC:2.6.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"valine-pyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R01215","MetaCyc:VALINE-PYRUVATE-AMINOTRANSFER-RXN"],"synonyms":[{"name":"L-valine:pyruvate aminotransferase activity","type":"related"},{"name":"alanine--valine transaminase activity","type":"related"},{"name":"alanine-oxoisovalerate aminotransferase activity","type":"related"},{"name":"transaminase C activity","type":"narrow"},{"name":"valine--pyruvate aminotransferase activity","type":"related"},{"name":"valine-pyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0009042"}


id: PBO:0109389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 18","termid":"PBO:0109389"}


id: PBO:0085337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoglucomutase; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; functions as the acceptor for a Glc-phosphotransferase; protein abundance increases in response to DNA replication stress; PGM2 has a paralog, PGM1, that arose from the whole genome duplication","termid":"PBO:0085337"}


id: PBO:0027603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_spindle_microtubule_depolymerization","termid":"PBO:0027603"}


id: FYPO:0003662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via an error-free mechanism, such as homologous recombination or break-induced replication, is increased.","definition_xrefs":["PMID:10373582","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased error-free double-strand break repair","synonyms":[{"name":"increased error-free double-strand break repair during mitotic cell cycle","type":"related"},{"name":"increased error-free double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0003662"}


id: MONDO:0044777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 14","secondary_identifiers":["OMIM:618014","GTR:AN1172965","MEDGEN:1646133","UMLS:C4693941","DOID:0080871"],"synonyms":[{"name":"GDF9-related primary ovarian insufficiency","type":"related"},{"name":"POF14","type":"related"},{"name":"premature ovarian failure 14","type":"exact"}],"termid":"MONDO:0044777","xrefs":{"Monarch":{"xref_id":"0044777"}}}


id: PBO:0054611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2016","termid":"PBO:0054611"}


id: PR:O13734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgo2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.15","synonyms":[{"name":"Spom972h-sgo2","type":"exact"}],"termid":"PR:O13734"}


id: GO:1900984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of vindoline.","definition_xrefs":["GOC:yaf","MetaCyc:PWY-5292","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete vindoline catabolic process (obsolete GO:1900984)","synonyms":[{"name":"vindoline breakdown","type":"exact"},{"name":"vindoline catabolism","type":"exact"},{"name":"vindoline degradation","type":"exact"}],"termid":"GO:1900984"}


id: PR:O14181
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl28 gene.","definition_xrefs":["UniProtKB:O14181","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L28, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.05c","synonyms":[{"name":"Spom972h-mrpl28","type":"exact"}],"termid":"PR:O14181"}


id: PBO:0034347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_upregulating_or_causing_pathological_process","termid":"PBO:0034347"}


id: MONDO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the hair follicles, sebaceous glands, or sweat glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"skin appendage disorder","termid":"MONDO:0024481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermal appendage tumor","secondary_identifiers":["DOID:2433","NCIT:C4463","MEDGEN:87527","SCTID:126489007","UMLS:C0345988","ICD9:239.2"],"synonyms":[{"name":"Epidermal appendage neoplasm","type":"exact"},{"name":"Epidermal appendage tumor","type":"exact"},{"name":"Epidermal appendage tumour","type":"exact"},{"name":"adnexal neoplasm of skin","type":"exact"},{"name":"adnexal neoplasm of the skin","type":"exact"},{"name":"adnexal tumor of skin","type":"exact"},{"name":"adnexal tumor of the skin","type":"exact"},{"name":"adnexal tumour of skin","type":"exact"},{"name":"adnexal tumour of the skin","type":"exact"},{"name":"cutaneous adnexal neoplasm","type":"exact"},{"name":"cutaneous appendage neoplasm","type":"exact"},{"name":"cutaneous appendage neoplasm (disease)","type":"exact"},{"name":"cutaneous appendage tumor","type":"exact"},{"name":"cutaneous appendage tumour","type":"exact"},{"name":"neoplasm of Epidermal appendage","type":"exact"},{"name":"neoplasm of cutaneous appendage","type":"exact"},{"name":"neoplasm of skin appendage","type":"exact"},{"name":"neoplasm of skin with adnexal differentiation","type":"exact"},{"name":"neoplasm of the skin appendage","type":"exact"},{"name":"skin appendage neoplasm","type":"exact"},{"name":"skin appendage tumor","type":"exact"},{"name":"skin appendage tumour","type":"exact"},{"name":"tumor of Epidermal appendage","type":"exact"},{"name":"tumor of cutaneous appendage","type":"exact"},{"name":"tumor of skin appendage","type":"exact"},{"name":"tumor of the skin appendage","type":"exact"},{"name":"tumour of Epidermal appendage","type":"exact"},{"name":"tumour of cutaneous appendage","type":"exact"},{"name":"tumour of skin appendage","type":"exact"},{"name":"tumour of the skin appendage","type":"exact"}],"termid":"MONDO:0002297","xrefs":{"Monarch":{"xref_id":"0002297"}}}


id: PBO:0088901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat protein Pfs2","termid":"PBO:0088901"}


id: PBO:0075596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialophorin","termid":"PBO:0075596"}


id: PBO:0075249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 1, Y-linked","termid":"PBO:0075249"}


id: PBO:0059266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L32","termid":"PBO:0059266"}


id: PBO:0047708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin like 2","termid":"PBO:0047708"}


id: GO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by vasomotor excitation and results in a decrease in the diameter of an artery during the baroreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in baroreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0001987"}


id: GO:0009829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events resulting in chemical or structural alterations of existing cell walls that contribute to fruit ripening.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"fruit ripening","termid":"GO:0009835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall modification involved in fruit ripening","synonyms":[{"name":"cell wall modification during ripening","type":"related"}],"termid":"GO:0009829"}


id: GO:0042212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cresol, a mixture of the aromatic alcohol isoforms o-, p-, and m-cresol, which is obtained from coal tar or petroleum. The isomers are used as disinfectants, textile scouring agents, surfactants and as intermediates in the manufacture of salicylaldehyde, coumarin, and herbicides as well as being a major component of creosote.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cresol metabolic process","synonyms":[{"name":"cresol metabolism","type":"exact"},{"name":"hydroxytoluene metabolic process","type":"exact"},{"name":"hydroxytoluene metabolism","type":"exact"}],"termid":"GO:0042212"}


id: PBO:0059560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1D, pseudogene","termid":"PBO:0059560"}


id: GO:0003677
data:
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id: PBO:0087996
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id: GO:0050835
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id: PR:O14107
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id: MONDO:0015882
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id: PATO:0001772
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id: PBO:0055892
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id: MONDO:0001281
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id: PBO:0077435
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id: PBO:0040065
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id: PBO:0085734
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id: GO:0009155
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"deoxyribonucleotide catabolic process","termid":"GO:0009264"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleotide breakdown","type":"exact"},{"name":"purine deoxyribonucleotide catabolism","type":"exact"},{"name":"purine deoxyribonucleotide degradation","type":"exact"}],"termid":"GO:0009155","terms_by_termid":{"GO:0035863":null}}


id: PBO:0081025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 7A","termid":"PBO:0081025"}


id: PBO:0048584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 8 pseudogene","termid":"PBO:0048584"}


id: GO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase IV specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed 5'-3' RNA polymerase activity","termid":"GO:0003899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0140098","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"RNA polymerase IV activity","synonyms":[{"name":"DNA-directed RNA polymerase activity involved in transcription from RNA polymerase IV promoter","type":"exact"}],"termid":"GO:0001057"}


id: FYPO:0000159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome condensation is abnormal. Chromosome condensation is the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division.","definition_xrefs":["GO:0030261","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal chromosome condensation","secondary_identifiers":["FYPO:0000028"],"synonyms":[{"name":"chromosome condensation defects","type":"exact"}],"termid":"FYPO:0000159"}


id: PBO:0084122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hEST1A/B (SMG5/6)-like protein; contributes to environment-sensing adaptive gene expression responses; Esl1p and Esl2p contain a 14-3-3-like domain and a putative PilT N-terminus ribonuclease domain; ESL1 has a paralog, ESL2, that arose from the whole genome duplication","termid":"PBO:0084122"}


id: MONDO:0002593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymic carcinoma (obsolete MONDO:0002593)","termid":"MONDO:0002593","xrefs":{"Monarch":{"xref_id":"0002593"}}}


id: GO:1990694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi medial cisterna membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["PMID:24119662","GOC:bhm","PMID:16038056"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi medial cisterna membrane (obsolete GO:1990694)","synonyms":[{"name":"intrinsic component of medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990694"}


id: GO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive alpha-beta T cell acquires the specialized features of an effector, regulatory, or memory T cell during an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation involved in immune response","termid":"GO:0002287"},{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell differentiation involved in immune response","synonyms":[{"name":"alpha-beta T cell development involved in immune response","type":"related"},{"name":"alpha-beta T cell differentiation during immune response","type":"related"},{"name":"alpha-beta T lymphocyte differentiation during immune response","type":"related"},{"name":"alpha-beta T-cell differentiation during immune response","type":"related"},{"name":"alpha-beta T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002293"}


id: PBO:0087791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; promotes attachment of small ubiquitin-related modifier sumo (Smt3p) to primarily cytoplasmic proteins; regulates Rsp5p ubiquitin ligase activity and is in turn itself regulated by Rsp5p; required for sumoylation of septins and histone H3 variant Cse4p, a prerequisite for STUbL-mediated Ub-dependent degradation; localizes to the septin ring; acts as an adapter between E2, Ubc9p and substrates; tends to compensate for survival of DNA damage in absence of Nfi1p","termid":"PBO:0087791"}


id: MONDO:0011185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thiel-Behnke corneal dystrophy (TBCD) is a rare form of superficial corneal dystrophy characterized by sub-epithelial honeycomb-shaped corneal opacities in the superficial cornea, and progressive visual impairment.","definition_xrefs":["Orphanet:98960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-stromal TGFBI dystrophy","termid":"MONDO:0000764"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Thiel-Behnke corneal dystrophy","secondary_identifiers":["ICD9:371.52","UMLS:C1562894","DOID:0060455","SCTID:417065002","MEDGEN:287070","MESH:C535942","GARD:9275","icd11.foundation:2082568100","OMIM:602082"],"synonyms":[{"name":"CDB2","type":"related"},{"name":"CDTB","type":"related"},{"name":"TBCD","type":"exact"},{"name":"Thiel Behnke corneal dystrophy","type":"related"},{"name":"Thiel-Behnke corneal dystrophy","type":"exact"},{"name":"Waardenburg-Jonker corneal dystrophy","type":"exact"},{"name":"anterior limiting membrane dystrophy type 2","type":"exact"},{"name":"anterior limiting membrane dystrophy type II","type":"exact"},{"name":"corneal dystrophy Thiel Behnke type","type":"related"},{"name":"corneal dystrophy honeycomb shaped","type":"related"},{"name":"corneal dystrophy honeycomb-shaped","type":"exact"},{"name":"corneal dystrophy of Bowman Layer, type 2","type":"related"},{"name":"corneal dystrophy of Bowman layer type 2","type":"exact"},{"name":"corneal dystrophy of Bowman layer type II","type":"exact"},{"name":"corneal dystrophy of the Bowman layer type 2","type":"related"},{"name":"corneal dystrophy, Thiel-Behnke type","type":"related"},{"name":"corneal dystrophy, honeycomb-Shaped","type":"related"},{"name":"curly fiber corneal dystrophy","type":"exact"},{"name":"curly fibre corneal dystrophy","type":"exact"},{"name":"honeycomb corneal dystrophy","type":"exact"}],"termid":"MONDO:0011185","xrefs":{"Monarch":{"xref_id":"0011185"}}}


id: MONDO:0004106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the testis and is characterized by the presence of collections of thin-walled spaces.","definition_xrefs":["NCIT:C39924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular yolk sac tumor","termid":"MONDO:0003402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular yolk sac tumor, macrocystic pattern","secondary_identifiers":["MEDGEN:271772","DOID:7097","UMLS:C1515307"],"synonyms":[{"name":"macrocystic pattern testicular yolk sac tumor","type":"related"},{"name":"macrocystic pattern testicular yolk sac tumour","type":"related"},{"name":"testicular yolk sac tumor, macrocystic pattern","type":"exact"}],"termid":"MONDO:0004106","xrefs":{"Monarch":{"xref_id":"0004106"}}}


id: MONDO:0020060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gonosome structural anomaly (obsolete MONDO:0020060)","secondary_identifiers":["Orphanet:98157"],"synonyms":[{"name":"Sex-chromosome structural anomaly","type":"exact"}],"termid":"MONDO:0020060","xrefs":{"Monarch":{"xref_id":"0020060"}}}


id: PBO:0029600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium:hydrogen_antiporter_activity","termid":"PBO:0029600"}


id: GO:0004579
data:
  {"annotated_genes":["SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101752],"is_not":false,"summary":null,"term":"GO:0004579"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine.","definition_xrefs":["RHEA:22980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyl transferase activity","termid":"GO:0004576"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide-protein glycotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446209","Reactome:R-HSA-9694793","EC:2.4.99.18","MetaCyc:RXN-16761"],"synonyms":[{"name":"asparagine N-glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide:protein-L-asparagine oligopolysaccharidotransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichyldiphosphoryloligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichylpyrophosphodiacetylchitobiose-protein glycosyltransferase activity","type":"exact"},{"name":"oligomannosyltransferase activity","type":"related"}],"termid":"GO:0004579","terms_by_termid":{"GO:0004579":null}}


id: GO:0021662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 4. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 structural organization","synonyms":[{"name":"rhombomere 4 structural organisation","type":"exact"}],"termid":"GO:0021662"}


id: MONDO:0018754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanide poisoning","secondary_identifiers":["ICD9:989.0","Orphanet:466670","SCTID:66207005"],"termid":"MONDO:0018754","xrefs":{"Monarch":{"xref_id":"0018754"}}}


id: GO:0052093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a symbiotic cellular or anatomical structure for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of specialized structure for nutrient acquisition","synonyms":[{"name":"formation by organism of specialized structure for nutrient acquisition from host","type":"exact"},{"name":"formation by symbiont of specialized structure for nutrient acquisition from host","type":"exact"},{"name":"formation of specialized structure for nutrient acquisition from host","type":"exact"}],"termid":"GO:0052093"}


id: PBO:0091404
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"New Inducer of Mitosis","termid":"PBO:0091404"}


id: SO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which bacterial RNA polymerase sigma 70 binds, to begin transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_RNApol_promoter","termid":"SO:0000613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter_sigma_70_element","synonyms":[{"name":"bacterial RNA polymerase promoter sigma 70","type":"exact"}],"termid":"SO:0001671"}


id: MONDO:0009845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelviscapular dysplasia (Cousin syndrome) is characterized by the association of pelviscapular dysplasia with epiphyseal abnormalities, congenital dwarfism and facial dysmorphism.","definition_xrefs":["Orphanet:93333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"pelviscapular dysplasia","secondary_identifiers":["OMIM:260660","MESH:C535550","SCTID:719299009","GARD:1555","MEDGEN:342400","UMLS:C1850040"],"synonyms":[{"name":"COUSIN syndrome","type":"related"},{"name":"Cousin syndrome","type":"exact"},{"name":"craniofacial Dysmorphism, hypoplasia of scapula and pelvis, and short stature","type":"related"},{"name":"craniofacial dysmorphism, hypoplasia of scapula and pelvis and short stature","type":"related"},{"name":"familial pelvis-scapular dysplasia","type":"exact"},{"name":"pelviscapular dysplasia","type":"exact"}],"termid":"MONDO:0009845","xrefs":{"Monarch":{"xref_id":"0009845"}}}


id: PBO:0088047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme variant; involved in error-free postreplication repair; forms a heteromeric complex with Ubc13p, an active ubiquitin-conjugating enzyme; cooperates with chromatin-associated RING finger proteins, Rad18p and Rad5p; protein abundance increases in response to DNA replication stress","termid":"PBO:0088047"}


id: MONDO:0022654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy hypogonadism collagenoma syndrome","secondary_identifiers":["UMLS:C1861860","MESH:C535582","MEDGEN:354607"],"synonyms":[{"name":"cardiomyopathy-hypogonadism-collagenoma syndrome","type":"related"}],"termid":"MONDO:0022654","xrefs":{"Monarch":{"xref_id":"0022654"}}}


id: MONDO:0016949
data:
  {"annotated_genes":["SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"}]},"cv_name":"mondo","definition":"Chromosome 16p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 16. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 16p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 16","termid":"MONDO:0016934"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01286":null},"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5315","icd11.foundation:325064766","UMLS:C0795861","MEDGEN:208643","Orphanet:262794"],"synonyms":[{"name":"16p duplication","type":"related"},{"name":"16p trisomy","type":"related"},{"name":"Duplication 16p","type":"related"},{"name":"chromosome 16p duplication","type":"related"},{"name":"partial duplication of chromosome 16p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 16","type":"exact"},{"name":"partial trisomy 16p","type":"related"},{"name":"partial trisomy of chromosome 16p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 16","type":"exact"},{"name":"trisomy 16p","type":"related"}],"termid":"MONDO:0016949","terms_by_termid":{"MONDO:0011402":null},"xrefs":{"Monarch":{"xref_id":"0016949"}}}


id: PR:O42847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 8A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C23A1.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.09","secondary_identifiers":["UniProtKB:O42847"],"synonyms":[{"name":"Spom972h-RBM8A","type":"exact"}],"termid":"PR:O42847"}


id: GO:0036337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand to a Fas receptor on the surface of the cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Fas is a death domain-containing member of the tumor necrosis factor receptor (TNFR) superfamily.","definition_xrefs":["PMID:12040174","GOC:nhn","Wikipedia:Fas_receptor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Fas signaling pathway","synonyms":[{"name":"Apo-1 signaling pathway","type":"exact"},{"name":"CD95 signaling pathway","type":"exact"},{"name":"FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"Fas receptor signaling pathway","type":"exact"},{"name":"Fas-FasL signaling pathway","type":"narrow"},{"name":"FasL signaling pathway","type":"related"},{"name":"FasR signaling pathway","type":"exact"}],"termid":"GO:0036337"}


id: MOD:00547
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:194","PubMed:14997490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","synonyms":[{"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","type":"related"},{"name":"AccQTag","type":"related"}],"termid":"MOD:00547"}


id: GO:0070975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a FHA domain of a protein. The FHA domain is a phosphopeptide recognition domain found in many regulatory proteins, and consists of approximately 80-100 amino acid residues folded into an 11-stranded beta sandwich.","definition_xrefs":["InterPro:IPR000253","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"FHA domain binding","synonyms":[{"name":"Forkhead-associated domain binding","type":"exact"}],"termid":"GO:0070975"}


id: PBO:0075281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin family member 21","termid":"PBO:0075281"}


id: PBO:0045115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublesex and mab-3 related transcription factor 2","termid":"PBO:0045115"}


id: GO:0035527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypropanoate + NADP+ = 3-oxopropanoate + H+ + NADPH.","definition_xrefs":["RHEA:26438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxypropionate dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.298","KEGG_REACTION:R09289","MetaCyc:RXN-8974"],"synonyms":[{"name":"3-hydroxypropanoate dehydrogenase (NADP+) activity","type":"exact"},{"name":"3-hydroxypropanoate:NADP+ oxidoreductase","type":"related"},{"name":"3-hydroxypropionate:NADP+ oxidoreductase","type":"related"}],"termid":"GO:0035527"}


id: PBO:0047372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO3 divergent transcript","termid":"PBO:0047372"}


id: PBO:0082616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coil protein involved in spindle-assembly checkpoint; required for inhibition of karyopherin/importin Pse1p (aka Kap121p) upon spindle assembly checkpoint arrest; phosphorylated by Mps1p upon checkpoint activation which leads to inhibition of anaphase promoting complex activity; forms a complex with Mad2p; gene dosage imbalance between MAD1 and MAD2 leads to chromosome instability","termid":"PBO:0082616"}


id: GO:2000287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myotome development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of myotome development","termid":"GO:2000290"},{"relation_name":"positively_regulates","term_name":"myotome development","termid":"GO:0061055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myotome development","termid":"GO:2000287"}


id: GO:0072421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in DNA damage checkpoint (obsolete GO:0072421)","synonyms":[{"name":"DNA damage checkpoint sensor mechanism","type":"related"},{"name":"DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in DNA damage checkpoint","type":"related"}],"termid":"GO:0072421"}


id: PBO:0070713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 18","termid":"PBO:0070713"}


id: PBO:0004683
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Spt4","termid":"PBO:0004683"}


id: PBO:0076179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 2B member 1","termid":"PBO:0076179"}


id: FYPO:0001139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of leucine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal leucine import","synonyms":[{"name":"abnormal L-leucine import","type":"exact"},{"name":"abnormal L-leucine import across plasma membrane","type":"exact"},{"name":"abnormal leucine import during mitotic cell cycle","type":"related"},{"name":"abnormal leucine import during vegetative growth","type":"exact"},{"name":"abnormal leucine import into cell","type":"exact"},{"name":"abnormal leucine uptake","type":"exact"}],"termid":"FYPO:0001139"}


id: PBO:0048949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 2","termid":"PBO:0048949"}


id: PBO:0064450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocalyxin like 2","termid":"PBO:0064450"}


id: PBO:0062228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 1 pseudogene","termid":"PBO:0062228"}


id: PBO:0027381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_pore_distribution","termid":"PBO:0027381"}


id: PBO:0024827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UreD","termid":"PBO:0024827"}


id: GO:0042751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a period of dormancy, similar to hibernation, but that occurs during the summer. It insulates against heat to prevent the harmful effects of the season.","definition_xrefs":["PMID:12443930","Wikipedia:Estivation","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"estivation","synonyms":[{"name":"aestivation","type":"exact"}],"termid":"GO:0042751"}


id: MONDO:0014335
data:
  {"annotated_genes":["SJAG_04482"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85847],"is_not":false,"summary":null,"term":"MONDO:0014335"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04482":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615760","Orphanet:404437","UMLS:C4014239","MEDGEN:862676","GARD:17672"],"synonyms":[{"name":"MSCCA","type":"related"},{"name":"diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome","type":"exact"},{"name":"microcephaly, progressive, seizures, and cerebral and cerebellar atrophy","type":"exact"},{"name":"microcephaly, progressive, with seizures and cerebral and cerebellar atrophy","type":"related"}],"termid":"MONDO:0014335","terms_by_termid":{"MONDO:0014335":null},"xrefs":{"Monarch":{"xref_id":"0014335"}}}


id: GO:0034346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of type III interferon production. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["GOC:add","ISBN:0126896631","PMID:15546383","PMID:16734557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of type III interferon production","termid":"GO:0034344"},{"relation_name":"positively_regulates","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of type III interferon production","synonyms":[{"name":"activation of type III interferon production","type":"narrow"},{"name":"positive regulation of type III IFN production","type":"exact"},{"name":"stimulation of type III interferon production","type":"narrow"},{"name":"up regulation of type III interferon production","type":"exact"},{"name":"up-regulation of type III interferon production","type":"exact"},{"name":"upregulation of type III interferon production","type":"exact"}],"termid":"GO:0034346"}


id: PBO:0080216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VIM antisense RNA 1","termid":"PBO:0080216"}


id: GO:0043554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of arsenite to arsenate, using oxygen (O2) as the electron acceptor. Arsenite oxidase provides electrons to an electron carrier which transfers them to oxygen utilizing respiratory systems.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using arsenite as electron donor","termid":"GO:0043554"}


id: PBO:0083274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion in cyr1 mutant results in loss of stress resistance","termid":"PBO:0083274"}


id: PBO:0088644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export chaperone","termid":"PBO:0088644"}


id: MONDO:0009163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalomalacia, multilocular","secondary_identifiers":["OMIM:225700","MESH:C565597","UMLS:C1856991","MEDGEN:341670"],"synonyms":[{"name":"encephalomalacia, multilocular","type":"exact"}],"termid":"MONDO:0009163","xrefs":{"Monarch":{"xref_id":"0009163"}}}


id: PBO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 6","termid":"PBO:0046843"}


id: PBO:0075468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 19","termid":"PBO:0075468"}


id: MONDO:0022939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete deafness hyperuricemia neurologic ataxia (obsolete MONDO:0022939)","termid":"MONDO:0022939","xrefs":{"Monarch":{"xref_id":"0022939"}}}


id: PBO:0090391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export adaptor Nmd3","termid":"PBO:0090391"}


id: PBO:0039427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 7","termid":"PBO:0039427"}


id: FYPO:0001701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bortezomib. Cells stop growing (and may die) at a concentration of bortezomib that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to bortezomib","synonyms":[{"name":"hypersensitive to bortezomib","type":"exact"},{"name":"sensitive to Velcade","type":"exact"},{"name":"sensitive to bortezomib during mitotic cell cycle","type":"related"},{"name":"sensitive to bortezomib during vegetative growth","type":"exact"}],"termid":"FYPO:0001701"}


id: GO:1903571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase D signaling.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:20497126"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein kinase D signaling (obsolete GO:1903571)","synonyms":[{"name":"down regulation of PKD signal transduction","type":"exact"},{"name":"down regulation of PKD signaling cascade","type":"related"},{"name":"down regulation of protein kinase D signal transduction","type":"exact"},{"name":"down regulation of protein kinase D signaling","type":"exact"},{"name":"down regulation of protein kinase D signaling cascade","type":"related"},{"name":"down regulation of protein kinase D signalling cascade","type":"related"},{"name":"down-regulation of PKD signal transduction","type":"exact"},{"name":"down-regulation of PKD signaling cascade","type":"related"},{"name":"down-regulation of protein kinase D signal transduction","type":"exact"},{"name":"down-regulation of protein kinase D signaling","type":"exact"},{"name":"down-regulation of protein kinase D signaling cascade","type":"related"},{"name":"down-regulation of protein kinase D signalling cascade","type":"related"},{"name":"downregulation of PKD signal transduction","type":"exact"},{"name":"downregulation of PKD signaling cascade","type":"related"},{"name":"downregulation of protein kinase D signal transduction","type":"exact"},{"name":"downregulation of protein kinase D signaling","type":"exact"},{"name":"downregulation of protein kinase D signaling cascade","type":"related"},{"name":"downregulation of protein kinase D signalling cascade","type":"related"},{"name":"inhibition of PKD signal transduction","type":"narrow"},{"name":"inhibition of PKD signaling cascade","type":"related"},{"name":"inhibition of protein kinase D signal transduction","type":"narrow"},{"name":"inhibition of protein kinase D signaling","type":"narrow"},{"name":"inhibition of protein kinase D signaling cascade","type":"related"},{"name":"inhibition of protein kinase D signalling cascade","type":"related"},{"name":"negative regulation of PKD signal transduction","type":"exact"},{"name":"negative regulation of PKD signaling cascade","type":"related"},{"name":"negative regulation of protein kinase D signal transduction","type":"exact"},{"name":"negative regulation of protein kinase D signaling cascade","type":"related"},{"name":"negative regulation of protein kinase D signalling cascade","type":"related"}],"termid":"GO:1903571"}


id: PR:P79058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug134 gene.","definition_xrefs":["UniProtKB:P79058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA stability protein mug134 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.16","synonyms":[{"name":"Spom972h-mug134","type":"exact"},{"name":"initiation of G zero protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79058"}


id: MONDO:1010196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital myopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, non-human animal","termid":"MONDO:1010195"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myopathy, non-human animal","secondary_identifiers":["OMIA:000694"],"termid":"MONDO:1010196","xrefs":{"Monarch":{"xref_id":"1010196"}}}


id: GO:0051208
data:
  {"annotated_genes":["SJAG_03850","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71967],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051209"},{"annotations":[107819],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The process of binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0098771"],"is_obsolete":false,"name":"sequestering of calcium ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion (Ca2+) retention","type":"exact"},{"name":"calcium ion (Ca2+) sequestering","type":"exact"},{"name":"calcium ion (Ca2+) sequestration","type":"exact"},{"name":"calcium ion (Ca2+) storage","type":"exact"},{"name":"calcium ion storage activity","type":"related"},{"name":"negative regulation of calcium ion (Ca2+) transport","type":"related"},{"name":"retention of calcium ion (Ca2+)","type":"exact"},{"name":"sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"storage of calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0051208","terms_by_termid":{"GO:0051209":null,"GO:0061454":null}}


id: FYPO:0002570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dATP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular dNTP level","termid":"FYPO:0005752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular dATP level","synonyms":[{"name":"increased cellular dATP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dATP level during vegetative growth","type":"exact"},{"name":"increased dATP accumulation","type":"related"}],"termid":"FYPO:0002570"}


id: MONDO:0008688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"WT limb-blood syndrome is characterized by hematological anomalies (Fanconi anemia, leukemia and lymphoma) often appearing during childhood. Anomalies of the limbs and hands are also present: bifid or hypoplastic thumbs, cutaneous syndactyly, and ulnar and radial defects. The syndrome has been described in several families. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:3466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"WT limb-blood syndrome","secondary_identifiers":["GARD:39","MEDGEN:231231","icd11.foundation:1407849410","MESH:C536751","OMIM:194350","SCTID:719019000","UMLS:C1327917"],"synonyms":[{"name":"WT limb blood syndrome","type":"related"},{"name":"WT limb-blood syndrome","type":"exact"},{"name":"WTsyndrome","type":"related"},{"name":"radial-ulnar hypoplasia with bone marrow failure and/or leukaemia","type":"related"},{"name":"radial-ulnar hypoplasia with bone marrow failure and/or leukemia","type":"related"}],"termid":"MONDO:0008688","xrefs":{"Monarch":{"xref_id":"0008688"}}}


id: GO:2000979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of forebrain neuron differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of forebrain neuron differentiation","termid":"GO:2000977"},{"relation_name":"positively_regulates","term_name":"forebrain neuron differentiation","termid":"GO:0021879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of forebrain neuron differentiation","termid":"GO:2000979"}


id: MONDO:0010318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any FG syndrome in which the cause of the disease is a mutation in the CASK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG syndrome 4","secondary_identifiers":["UMLS:C1845546","MEDGEN:336965","OMIM:300422"],"synonyms":[{"name":"CASK FG syndrome","type":"exact"},{"name":"FG syndrome 4","type":"exact"},{"name":"FG syndrome caused by mutation in CASK","type":"exact"},{"name":"FG syndrome caused by mutation in cask","type":"exact"},{"name":"FG syndrome type 4","type":"exact"},{"name":"FGS4","type":"related"},{"name":"X-linked intellectual disability with or without nystagmus","type":"related"},{"name":"cask FG syndrome","type":"exact"},{"name":"intellectual disability, X-linked, with or without Nystagmus","type":"related"},{"name":"mental retardation, X-linked, with or without Nystagmus","type":"related"},{"name":"mental retardation, with or without nystagmus","type":"exact"}],"termid":"MONDO:0010318","xrefs":{"Monarch":{"xref_id":"0010318"}}}


id: FYPO:0006984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript synthesized on a DNA template by RNA polymerase III is longer than normal due to transcription beyond the normal termination site.","definition_xrefs":["PomBase:mah","PMID:31294478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcriptional readthrough","termid":"FYPO:0003049"},{"relation_name":"output_of","term_name":"abnormal termination of RNA polymerase III transcription","termid":"FYPO:0006983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000294"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0003048","FYPO:0001985"],"is_obsolete":false,"name":"increased transcriptional readthrough at RNA polymerase III-transcribed genes","synonyms":[{"name":"3'-extended transcript at RNA polymerase III-transcribed genes","type":"related"},{"name":"increased transcript length by 3' extension of RNA polymerase III-transcribed genes","type":"related"},{"name":"increased transcript length due to transcriptional readthrough at RNA polymerase III-transcribed genes","type":"exact"},{"name":"poly(A) readthrough at RNA polymerase III-transcribed genes","type":"related"}],"termid":"FYPO:0006984"}


id: PBO:0030626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_during_vegetative_growth","termid":"PBO:0030626"}


id: GO:0032033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin II complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"},{"relation_name":"is_a","term_name":"myosin II binding","termid":"GO:0045159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674","GO:0008092"],"is_obsolete":false,"name":"myosin II light chain binding","termid":"GO:0032033"}


id: PBO:0047328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid hydroxylase domain containing 2","termid":"PBO:0047328"}


id: MONDO:0011845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 3","secondary_identifiers":["MEDGEN:375283","OMIM:607498","UMLS:C1843782"],"synonyms":[{"name":"MGR3","type":"related"},{"name":"migraine with or without aura, susceptibility to, 3","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0011845","xrefs":{"Monarch":{"xref_id":"0011845"}}}


id: PBO:0081321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 107","termid":"PBO:0081321"}


id: PBO:0084388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity phosphate transporter; acts upstream of Pho81p in regulation of the PHO pathway; deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth; PHO90 has a paralog, PHO87, that arose from the whole genome duplication","termid":"PBO:0084388"}


id: GO:0018474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-formylbenzoate + H2O + NAD+ = 2 H+ + NADH + phthalate.","definition_xrefs":["RHEA:27298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-formylbenzoate dehydrogenase (NAD+) activity","secondary_identifiers":["UM-BBD_reactionID:r0490","EC:1.2.1.78"],"synonyms":[{"name":"2-carboxybenzaldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0018474"}


id: PBO:0090368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex (derlin) Der1/Dfm1","termid":"PBO:0090368"}


id: FYPO:0003609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of dehydrodolichyl diphosphate synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal dehydrodolichyl diphosphate synthase activity","termid":"FYPO:0003608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased dehydrodolichyl diphosphate synthase activity","synonyms":[{"name":"reduced dehydrodolichyl diphosphate synthase activity","type":"exact"}],"termid":"FYPO:0003609"}


id: PBO:0029212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dTTP_biosynthetic_process","termid":"PBO:0029212"}


id: PBO:0082484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cargo-transport protein involved in endocytosis; interacts with phosphatidylinositol-4-kinase Stt4p; is required, along with Efr3p, for the assembly and recruitment of multiple copies of the kinase into phosphoinositide kinase (PIK) patches at the plasma membrane; positively regulates Stt4p; GFP-fusion protein localizes to the cytoplasm; YGR198W is an essential gene","termid":"PBO:0082484"}


id: PBO:0082557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centromeric histone H3-like protein; associates with promoters, accessible chromatin, and RNAPII-bound regions; Cse4p associates with centromeres, promoting kinetochore assembly and Sgo1p association with centromeric chromatin; Ipl1p-dependent phosphorylation destabilizes defective kinetochores promoting bi-orientation; phosphorylation by Cdc7p maintains Cse4p at kinetochores and promotes faithful chromosome segregation; regulated by multiple E3 ligases; complements human homolog CENPA mutations","termid":"PBO:0082557"}


id: GO:0045012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A major histocompatibility complex class II receptor. These display processed antigens from virally-infected or transformed cells. Class-II-positive cells ('antigen-presenting cells') can take up antigens from outside by endocytosis, degrade them into small peptides, and re-export the peptides (now bound to MHC class II protein) to the cell surface. These peptide-MHC class II complexes can then be recognized by specific CD4+ lymphocytes.","definition_xrefs":["ISBN:081533642X","ISBN:0879694971"],"gene_count":0,"genotype_count":0,"name":"obsolete MHC class II receptor activity (obsolete GO:0045012)","synonyms":[{"name":"MHC class II receptor activity","type":"exact"},{"name":"class II major histocompatibility complex antigen","type":"related"},{"name":"major histocompatibility complex class II receptor","type":"exact"}],"termid":"GO:0045012"}


id: PBO:0083823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Dam1p and Pse1p to connect the DASH complex with microtubules (MT); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis","termid":"PBO:0083823"}


id: GO:0032913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of transforming growth factor-beta3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta3 production","termid":"GO:0032910"},{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta production","termid":"GO:0071635"},{"relation_name":"negatively_regulates","term_name":"transforming growth factor beta3 production","termid":"GO:0032907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transforming growth factor beta3 production","synonyms":[{"name":"down regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"down-regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"downregulation of transforming growth factor-beta3 production","type":"exact"},{"name":"inhibition of transforming growth factor-beta3 production","type":"narrow"},{"name":"negative regulation of TGF-B3 production","type":"exact"},{"name":"negative regulation of TGFB3 production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta3 production","type":"exact"}],"termid":"GO:0032913"}


id: PATO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter X.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"x-shaped","termid":"PATO:0002429"}


id: GO:0102925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-D-galactose + solanidine = H+ + gamma-solanine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete solanine UDP-galactose galactosyltransferase activity (obsolete GO:0102925)","termid":"GO:0102925"}


id: PBO:0040129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 15","termid":"PBO:0040129"}


id: FYPO:0002362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3 acetylation during mitotic cell cycle","type":"related"},{"name":"reduced histone H3 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002362"}


id: GO:0035647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a 3-oxo-delta-4,5-steroid + NADPH + H+ = a 5-beta-3-oxo-steroid + NADP+.","definition_xrefs":["MetaCyc:RXN-9726","PMID:19166903","GOC:kad"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-delta(4,5)-steroid 5-beta-reductase activity (obsolete GO:0035647)","synonyms":[{"name":"3-oxo-delta4,5-steroid 5beta-reductase","type":"exact"}],"termid":"GO:0035647"}


id: PBO:0043936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB regulated transcription coactivator 1","termid":"PBO:0043936"}


id: PBO:0084295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intra-Golgi v-SNARE; required for transport of proteins between an early and a later Golgi compartment","termid":"PBO:0084295"}


id: MONDO:0030300
data:
  {"annotated_genes":["SJAG_01322","SJAG_02611"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85779,85780],"is_not":false,"summary":null,"term":"MONDO:0030300"}]},"cv_name":"mondo","definition":"A dilated cardiomyopathy that is characterized by neonatal onset of severe cardiomyopathy, with rapid progression to cardiac decompensation and death unless the patient undergoes heart transplantation and that has material basis in homozygous or compound heterozygous mutation in the RPL3L gene on chromosome 16p13.","definition_xrefs":["DOID:0081160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01322":null,"SJAG_02611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2D","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543535","OMIM:619371","MEDGEN:1782612"],"synonyms":[{"name":"CMD2D","type":"exact"},{"name":"cardiomyopathy, dilated, 2D","type":"exact"}],"termid":"MONDO:0030300","terms_by_termid":{"MONDO:0030300":null},"xrefs":{"Monarch":{"xref_id":"0030300"}}}


id: GO:0097446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, and/or maintained in, a specific location in a eisosome filament (also called linear eisosome), a filamentous cortical structure formed, in S. pombe, by the eisosome component Pil1.","definition_xrefs":["PMID:22869600","PMID:23722945","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"},{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to eisosome filament","synonyms":[{"name":"protein localization to linear eisosome","type":"exact"}],"termid":"GO:0097446"}


id: PBO:0071828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 23","termid":"PBO:0071828"}


id: PR:Q09732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sister chromatid cohesion protein DCC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein dcc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.15c","secondary_identifiers":["UniProtKB:Q09732"],"synonyms":[{"name":"Spom972h-DSCC1","type":"exact"},{"name":"defective in sister chromatid cohesion protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09732"}


id: PBO:0114751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin unloading factor (WAPL) Wpl1","termid":"PBO:0114751"}


id: PBO:0079704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding protein 1","termid":"PBO:0079704"}


id: PBO:0074358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 4 pseudogene 1","termid":"PBO:0074358"}


id: RO:0002638
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of endoparasite-of in which the parasite inhabits the spaces between host cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"endoparasite_of","termid":"RO:0002634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular_endoparasite_of","termid":"RO:0002638"}


id: GO:2000344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the acrosome reaction.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acrosome reaction","termid":"GO:0060046"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acrosome reaction","termid":"GO:2000344"}


id: _global:inversely_associated_with
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 inversely_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 decreases if the magnitude of q2 is increased, or the magnitude of q1 increases if the magnitude of q2 is decreased. The relationship is not necessarily linear.","definition_xrefs":["Wikipedia:Association_(statistics)","PATOC:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversely_associated_with","termid":"_global:inversely_associated_with"}


id: PBO:0085951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is defective in unfolded protein response; possibly involved in a membrane regulation metabolic pathway; member of the PhzF superfamily, though most likely not involved in phenazine production","termid":"PBO:0085951"}


id: MONDO:0014713
data:
  {"annotated_genes":["SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85235,85236],"is_not":false,"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"Any porokeratosis (disease) in which the cause of the disease is a mutation in the FDPS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disseminated superficial actinic porokeratosis","termid":"MONDO:0019212"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 9, multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:894586","OMIM:616631","UMLS:C4225262","GARD:16146"],"synonyms":[{"name":"FDPS porokeratosis (disease)","type":"exact"},{"name":"POROK9","type":"exact"},{"name":"porokeratosis (disease) caused by mutation in FDPS","type":"exact"},{"name":"porokeratosis 9, multiple types","type":"exact"},{"name":"porokeratosis 9, multiple types; POROK9","type":"exact"}],"termid":"MONDO:0014713","terms_by_termid":{"MONDO:0014713":null},"xrefs":{"Monarch":{"xref_id":"0014713"}}}


id: MONDO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that arises from the surface of the cervix.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"},{"relation_name":"is_a","term_name":"uterine polyp","termid":"MONDO:0004701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical polyp","secondary_identifiers":["ICD9:219","SCTID:65576009","DOID:0060325","HP:0030159","MEDGEN:507540","NCIT:C2939","UMLS:C0007855"],"synonyms":[{"name":"adenomatous polyp of cervix","type":"exact"},{"name":"adenomatous polyp of the cervix","type":"exact"},{"name":"adenomatous polyp of the uterine cervix","type":"exact"},{"name":"adenomatous polyp of uterine cervix","type":"exact"},{"name":"cervical polyp","type":"exact"},{"name":"cervical polyp (disease)","type":"exact"},{"name":"cervix adenomatous polyp","type":"exact"},{"name":"cervix polyp","type":"exact"},{"name":"cervix uteri adenomatous polyp","type":"exact"},{"name":"cervix uteri polyp","type":"exact"},{"name":"polyp of cervix","type":"exact"},{"name":"polyp of cervix uteri","type":"exact"},{"name":"polyp of the cervix","type":"exact"},{"name":"polyp of the cervix uteri","type":"exact"},{"name":"polyp of the uterine cervix","type":"exact"},{"name":"polyp of uterine cervix","type":"exact"},{"name":"uterine cervix adenomatous polyp","type":"exact"},{"name":"uterine cervix polyp","type":"exact"}],"termid":"MONDO:0000751","xrefs":{"Monarch":{"xref_id":"0000751"}}}


id: PR:Q09761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sld3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.06","synonyms":[{"name":"Spom972h-sld3","type":"exact"},{"name":"meiotically up-regulated gene 175 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09761"}


id: MONDO:0030028
data:
  {"annotated_genes":["SJAG_00763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84621],"is_not":false,"summary":null,"term":"MONDO:0030028"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00763":null},"genotype_count":0,"is_obsolete":false,"name":"neurodegeneration, childhood-onset, with ataxia, tremor, optic atrophy, and cognitive decline","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394335","OMIM:618868","MEDGEN:1715031"],"synonyms":[{"name":"CONATOC","type":"exact"},{"name":"NEURODEGENERATION, CHILDHOOD-ONSET, WITH ATAXIA, TREMOR, OPTIC ATROPHY, AND COGNITIVE DECLINE","type":"exact"},{"name":"neurodegeneration, childhood-onset, with ataxia, tremor, optic atrophy, and cognitive decline","type":"exact"}],"termid":"MONDO:0030028","terms_by_termid":{"MONDO:0030028":null},"xrefs":{"Monarch":{"xref_id":"0030028"}}}


id: PBO:0085527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S27, no bacterial homolog; RPS27A has a paralog, RPS27B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085527"}


id: PBO:0004333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid protease (predicted)","termid":"PBO:0004333"}


id: PBO:0034321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transitively_provides_input_for","termid":"PBO:0034321"}


id: MONDO:0005627
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the head and neck. Representative examples include oral cavity squamous cell carcinoma, laryngeal squamous cell carcinoma, and salivary gland carcinoma.","definition_xrefs":["NCIT:C4013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"head and neck cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:78920","DOID:11934","UMLS:C0278996","EFO:0006859"],"synonyms":[{"name":"cancer of craniocervical region","type":"exact"},{"name":"cancer of head and neck","type":"exact"},{"name":"cancer of the head and neck","type":"exact"},{"name":"craniocervical region cancer","type":"exact"},{"name":"head and neck cancer","type":"exact"},{"name":"head and neck malignant neoplasia","type":"exact"},{"name":"head and neck neoplasm","type":"broad"},{"name":"head and neck tumors","type":"broad"},{"name":"head and neck tumours","type":"broad"},{"name":"head/neck neoplasm","type":"broad"},{"name":"malignant craniocervical region neoplasm","type":"exact"},{"name":"malignant head and neck neoplasm","type":"exact"},{"name":"malignant head and neck tumor","type":"exact"},{"name":"malignant head and neck tumour","type":"exact"},{"name":"malignant neoplasm of craniocervical region","type":"exact"},{"name":"malignant neoplasm of head and neck","type":"exact"},{"name":"malignant neoplasm of the head and neck","type":"exact"},{"name":"malignant tumor of head and neck","type":"exact"},{"name":"malignant tumor of the head and neck","type":"exact"},{"name":"malignant tumour of head and neck","type":"exact"},{"name":"malignant tumour of the head and neck","type":"exact"},{"name":"tumour of head and neck","type":"broad"}],"termid":"MONDO:0005627","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0005627"}}}


id: GO:0048725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cibarial fish-trap bristle over time, from its formation to the mature structure. A cibarial fish-trap bristle is a sensory bristle on the anterior plate of the cibarium.","definition_xrefs":["GOC:rc","FBbt:00004136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chaeta development","termid":"GO:0022416"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cibarial fish-trap bristle development","synonyms":[{"name":"fish-trap bristle development","type":"exact"}],"termid":"GO:0048725"}


id: GO:0046834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing one or more phosphate groups into a lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents.","definition_xrefs":["ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid phosphorylation","termid":"GO:0046834"}


id: GO:0014710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of somitomeric trunk muscle development. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"negatively_regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of somitomeric trunk muscle development","termid":"GO:0014710"}


id: PBO:0085233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pbp1p binding protein; interacts strongly with Pab1p-binding protein 1 (Pbp1p) in the yeast two-hybrid system; also interacts with Lsm12p in a copurification assay; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085233"}


id: PBO:0074746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 105B","termid":"PBO:0074746"}


id: RO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between c and p if and only if c is capable of some activity a, and a positively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_regulating","termid":"RO:0002596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_positively_regulating","termid":"RO:0002598"}


id: PBO:0088734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo-type fold protein, zf-MYND type zinc finger protein, Mub1-Rad6-Ubr2 ubiquitin ligase complex Mub1","termid":"PBO:0088734"}


id: GO:0046203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine catabolic process","synonyms":[{"name":"spermidine breakdown","type":"exact"},{"name":"spermidine catabolism","type":"exact"},{"name":"spermidine degradation","type":"exact"}],"termid":"GO:0046203"}


id: FYPO:0007855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PMID:12606573","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic spindle assembly checkpoint signaling","synonyms":[{"name":"increased duration of protein localisation to spindle during meiosis I","type":"exact"},{"name":"increased duration of protein localization to meiosis I spindle","type":"exact"},{"name":"increased duration of protein localization to meiotic spindle during meiosis I","type":"exact"},{"name":"increased duration of protein localization to spindle during first meiotic nuclear division","type":"exact"},{"name":"prolonged protein localization to spindle during meiosis I","type":"exact"}],"termid":"FYPO:0007855"}


id: PBO:0026907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_chromosome_arms","termid":"PBO:0026907"}


id: GO:0007381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the labial segment following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, head","termid":"GO:0007380"},{"relation_name":"part_of","term_name":"posterior head segmentation","termid":"GO:0035289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, labial segment","termid":"GO:0007381"}


id: MONDO:0021570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Hauptmann-Thannhauser muscular dystrophy (obsolete MONDO:0021570)","termid":"MONDO:0021570","xrefs":{"Monarch":{"xref_id":"0021570"}}}


id: PBO:0087703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme","termid":"PBO:0087703"}


id: PBO:0000648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciclin domain protein","termid":"PBO:0000648"}


id: PR:O74772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein BUD31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03236","PANTHER:PTHR19411:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.11","secondary_identifiers":["UniProtKB:O74772"],"synonyms":[{"name":"Spom972h-BUD31","type":"exact"},{"name":"complexed with cdc5 protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74772"}


id: PBO:0072911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAND3 pseudogene 1","termid":"PBO:0072911"}


id: PBO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase Ura2 (predicted)","termid":"PBO:0002513"}


id: GO:0005541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with acyl-CoA or acyl, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group, or any group formally derived by removal of a hydroxyl group from the acid function of an organic acid.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl-CoA or acyl binding (obsolete GO:0005541)","synonyms":[{"name":"acyl-CoA or acyl binding","type":"exact"}],"termid":"GO:0005541"}


id: GO:1990427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at either end of a stereocilia tip link that provides the anchor in the stereocilia membrane.","definition_xrefs":["PMID:21709241","PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilia tip link","termid":"GO:0002140"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia tip-link density","termid":"GO:1990427"}


id: FYPO:0006246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to osmotic stress","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during osmotic stress","type":"exact"}],"termid":"FYPO:0006246"}


id: GO:0019170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactaldehyde + NAD+ = methylglyoxal + NADH + H+.","definition_xrefs":["EC:1.1.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylglyoxal reductase (NADH) activity","secondary_identifiers":["MetaCyc:D-LACTALDEHYDE-DEHYDROGENASE-RXN","RHEA:24528"],"synonyms":[{"name":"(R)-lactaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"D-lactaldehyde dehydrogenase activity","type":"exact"},{"name":"methylglyoxal reductase (NADH-dependent) activity","type":"exact"},{"name":"methylglyoxal reductase activity","type":"exact"}],"termid":"GO:0019170"}


id: PATO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A optical quality inhering in a bearer by virtue of the bearer's not being clear; not transmitting or reflecting light or radiant energy.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opacity","termid":"PATO:0000957"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opaque","synonyms":[{"name":"clouding","type":"related"},{"name":"cloudy","type":"related"},{"name":"non-transparent","type":"exact"}],"termid":"PATO:0000963"}


id: PBO:0113495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor 3; contains two ABC cassettes; binds and hydrolyzes ATP; interacts with mRNA independently of translation; involved in frameshifting at stalled ribosomes; YEF3 has a paralog, HEF3, that arose from the whole genome duplication","termid":"PBO:0113495"}


id: PBO:0057559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 708","termid":"PBO:0057559"}


id: GO:1901518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aspyridone A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"aspyridone A metabolic process","termid":"GO:1901516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aspyridone A biosynthetic process","synonyms":[{"name":"aspyridone A anabolism","type":"exact"},{"name":"aspyridone A biosynthesis","type":"exact"},{"name":"aspyridone A formation","type":"exact"},{"name":"aspyridone A synthesis","type":"exact"}],"termid":"GO:1901518"}


id: PBO:0110465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 5","termid":"PBO:0110465"}


id: GO:0061424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of peroxisome organization.","definition_xrefs":["PMID:7500953","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061424)","synonyms":[{"name":"positive regulation of peroxisome organisation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0061424"}


id: PBO:0110970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 antisense RNA 1","termid":"PBO:0110970"}


id: GO:0008974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribulose 5-phosphate + ATP = D-ribulose 1,5-bisphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:19365","EC:2.7.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoribulokinase activity","secondary_identifiers":["KEGG_REACTION:R01523","MetaCyc:PHOSPHORIBULOKINASE-RXN"],"synonyms":[{"name":"5-phosphoribulose kinase activity","type":"related"},{"name":"ATP:D-ribulose-5-phosphate 1-phosphotransferase activity","type":"related"},{"name":"PKK","type":"related"},{"name":"PRK","type":"related"},{"name":"PRuK","type":"related"},{"name":"phosphopentokinase activity","type":"related"},{"name":"phosphoribulokinase (phosphorylating)","type":"related"},{"name":"ribulose phosphate kinase activity","type":"related"},{"name":"ribulose-5-phosphate kinase activity","type":"related"}],"termid":"GO:0008974"}


id: PBO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO deconjugating cysteine peptidase Ulp2 (predicted)","termid":"PBO:0001168"}


id: PBO:0003289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus (SURF40 family)","termid":"PBO:0003289"}


id: PBO:0052850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-6","termid":"PBO:0052850"}


id: PBO:0061811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 1 Y-linked","termid":"PBO:0061811"}


id: GO:0018916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrobenzene (nitrobenzol), a derivative of benzene with an NO2 group attached to the ring. It is a yellow aromatic liquid used in perfumery and manufactured in large quantities in the preparation of aniline.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:nb"],"synonyms":[{"name":"nitrobenzene metabolism","type":"exact"}],"termid":"GO:0018916"}


id: GO:0075175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cAMP-mediated signaling in response to host (obsolete GO:0075175)","synonyms":[{"name":"positive regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"positive regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"positive regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075175"}


id: MONDO:1011825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroid plexus tumour, non-human animal","secondary_identifiers":["OMIA:002403"],"termid":"MONDO:1011825","xrefs":{"Monarch":{"xref_id":"1011825"}}}


id: PBO:0070366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 4","termid":"PBO:0070366"}


id: PBO:0013825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-synthase Met3 (predicted)","termid":"PBO:0013825"}


id: MONDO:0017128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited digestive tract tumor (obsolete MONDO:0017128)","secondary_identifiers":["Orphanet:271835"],"synonyms":[{"name":"genetic digestive tract tumor","type":"related"},{"name":"genetic digestive tract tumour","type":"related"}],"termid":"MONDO:0017128","xrefs":{"Monarch":{"xref_id":"0017128"}}}


id: PBO:0027400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_triglyceride_biosynthetic_process","termid":"PBO:0027400"}


id: MONDO:0009109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysinuric protein intolerance (LPI) is a very rare inherited multisystem condition caused by disturbance in amino acid metabolism.","definition_xrefs":["Orphanet:470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"lysinuric protein intolerance","secondary_identifiers":["MESH:C562687","NANDO:1200809","NCIT:C121563","NANDO:2200488","OMIM:222700","SCTID:303852004","MEDGEN:75704","UMLS:C0268647","GARD:3335","icd11.foundation:972050440","ICD9:270.8","MedDRA:10058300","DOID:0060439"],"synonyms":[{"name":"Dibasicamino aciduria II","type":"related"},{"name":"LPI","type":"exact"},{"name":"dibasic amino aciduria 2","type":"related"},{"name":"dibasic amino aciduria II","type":"exact"},{"name":"dibasic aminoaciduria 2","type":"related"},{"name":"hyperdibasic aminoaciduria","type":"exact"},{"name":"hyperdibasic aminoaciduria type 2","type":"exact"},{"name":"lysinuric PROTEIN intolerance","type":"related"},{"name":"lysinuric protein intolerance","type":"exact"}],"termid":"MONDO:0009109","xrefs":{"Monarch":{"xref_id":"0009109"}}}


id: MONDO:0019444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A zoonotic parasitic disease caused by the consumption of raw or undercooked meat (pork and wild game) infected by nematodes of the genus Trichinella and that is characterized by an enteral (intestinal) phase, that can be asymptomatic or that can manifests with diarrhea, nausea, vomiting and abdominal pain, and a parenteral (muscular) phase, manifesting with fever, periorbital edema, muscle swelling and pain, weakness, and in some cases, skin rash and peripheral edema. Rarely, potentially fatal cardiac (i.e. myocarditis), pulmonary (i.e. pneumonitis, respiratory failure), and nervous system (i.e. meningoencephalitis) complications may occur.","definition_xrefs":["Orphanet:863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Enoplea infectious disease","termid":"MONDO:0005745"},{"relation_name":"is_a","term_name":"parasitic myositis","termid":"MONDO:0016128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"trichinellosis","secondary_identifiers":["DOID:9784","ICD9:124","MESH:D014235","UMLS:C0040896","ICD10CM:B75","SCTID:709018004","MEDGEN:21645","SCTID:88264003","GARD:5250","icd11.foundation:284613639","MedDRA:10044608","NCIT:C85199"],"synonyms":[{"name":"Human trichinellosis","type":"related"},{"name":"Trichinella caused disease or disorder","type":"exact"},{"name":"Trichinella disease or disorder","type":"exact"},{"name":"Trichinella infectious disease","type":"exact"},{"name":"Trichinella spiralis infection","type":"narrow"},{"name":"infection with Trichinella","type":"related"},{"name":"trichiniasis","type":"related"},{"name":"trichinosis","type":"exact"}],"termid":"MONDO:0019444","xrefs":{"Monarch":{"xref_id":"0019444"}}}


id: MONDO:0007431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dens in dente and palatal invaginations","secondary_identifiers":["MEDGEN:377628","UMLS:C1852250","OMIM:125300","MESH:C538211"],"synonyms":[{"name":"dens in dente and palatal INVAGINATIONS","type":"related"}],"termid":"MONDO:0007431","xrefs":{"Monarch":{"xref_id":"0007431"}}}


id: PBO:0045132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 2","termid":"PBO:0045132"}


id: PBO:0052970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL histone methyl-lysine binding protein 1","termid":"PBO:0052970"}


id: PBO:0013119
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that suppresses Calcineurin deletion","termid":"PBO:0013119"}


id: PBO:0011953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-component_or_sequence","termid":"PBO:0011953"}


id: GO:0000446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The THO complex when it is acting as a nuclear complex that is required for transcription elongation through genes containing tandemly repeated DNA sequences. In S. cerevisiae, it is composed of four subunits: Hpr1, Tho2, Thp2, and Mft1, while the human complex is composed of 7 subunits.","definition_xrefs":["PMID:11979277","PMID:16983072","GOC:krc","PMID:11060033","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"THO complex","termid":"GO:0000347"},{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nucleoplasmic THO complex","termid":"GO:0000446"}


id: MONDO:0008545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"beta thalassemia","termid":"MONDO:0019402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"thalassemia, beta+, silent allele","secondary_identifiers":["MEDGEN:349988","MESH:C566065","OMIM:187550","UMLS:C1861232"],"synonyms":[{"name":"thalassemia, beta+, silent allele","type":"exact"}],"termid":"MONDO:0008545","xrefs":{"Monarch":{"xref_id":"0008545"}}}


id: GO:0102454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin + UDP-D-galactose = cyanidin 3-O-beta-D-galactoside betaine + UDP.","definition_xrefs":["RHEA:35631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13960","EC:2.4.1.294"],"termid":"GO:0102454"}


id: PBO:0044523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAB2 interacting protein","termid":"PBO:0044523"}


id: GO:0016271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A permanent cessation of all vital functions of a tissue.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue death (obsolete GO:0016271)","termid":"GO:0016271"}


id: GO:0014023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"primary neural tube formation","termid":"GO:0014020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural rod formation","termid":"GO:0014023"}


id: PBO:0090289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA binding protein, vigilin","termid":"PBO:0090289"}


id: FYPO:0007222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in regions containing protein-coding genes occurs to a lower extent than normal.","definition_xrefs":["PMID:31260531","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0001458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K14 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone H3-K14 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K14 acetylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K14 acetylation at protein coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K14 acetylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007222"}


id: FYPO:0001011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells do not contain filamentous actin structures, such as cortical patches or dots, or rings.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"filamentous actin absent","synonyms":[{"name":"F-actin absent","type":"exact"},{"name":"actin filaments absent","type":"exact"},{"name":"filamentous actin absent during mitotic cell cycle","type":"related"},{"name":"filamentous actin absent during vegetative growth","type":"exact"}],"termid":"FYPO:0001011"}


id: PBO:0114436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily J member 1","termid":"PBO:0114436"}


id: PBO:0075044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-7","termid":"PBO:0075044"}


id: GO:0008893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine 3',5'-bis(diphosphate) + H2O = diphosphate + GDP + H+.","definition_xrefs":["RHEA:14253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoric monoester hydrolase activity","termid":"GO:0016794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity","secondary_identifiers":["MetaCyc:PPGPPSYN-RXN","EC:3.1.7.2"],"synonyms":[{"name":"(ppGpp)ase activity","type":"related"},{"name":"PpGpp phosphohydrolase activity","type":"related"},{"name":"PpGpp-3'-pyrophosphohydrolase activity","type":"related"},{"name":"guanosine-3',5'-bis(diphosphate) 3'-diphosphohydrolase activity","type":"exact"},{"name":"guanosine-3',5'-bis(diphosphate) 3'-pyrophosphatase activity","type":"related"},{"name":"guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase activity","type":"exact"},{"name":"penta-phosphate guanosine-3'-diphosphohydrolase activity","type":"related"},{"name":"penta-phosphate guanosine-3'-pyrophosphohydrolase activity","type":"related"}],"termid":"GO:0008893"}


id: MONDO:0010743
data:
  {"annotated_genes":["SJAG_01732"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86414],"is_not":false,"summary":null,"term":"MONDO:0010743"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01732":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1839163","NCIT:C176617","Orphanet:852","MEDGEN:326416","GARD:5176","MESH:C564052","OMIM:313900"],"synonyms":[{"name":"THC","type":"related"},{"name":"THC1","type":"related"},{"name":"X-linked thrombocytopenia","type":"related"},{"name":"X-linked thrombocytopenia with normal platelets","type":"exact"},{"name":"XLT","type":"related"},{"name":"thrombocytopenia 1","type":"exact"},{"name":"thrombocytopenia type 1","type":"exact"},{"name":"thrombocytopenia, X-linked","type":"related"},{"name":"thrombocytopenia, X-linked, 1","type":"related"},{"name":"thrombocytopenia, X-linked, X-linked recessive","type":"exact"},{"name":"thrombocytopenia, X-linked, intermittent","type":"related"},{"name":"thrombocytopenia, X-linked, intermittent, X-linked recessive","type":"exact"}],"termid":"MONDO:0010743","terms_by_termid":{"MONDO:0010743":null},"xrefs":{"Monarch":{"xref_id":"0010743"}}}


id: GO:0016356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete organophosphorus susceptibility/resistance (obsolete GO:0016356)","synonyms":[{"name":"organophosphorus susceptibility/resistance","type":"exact"}],"termid":"GO:0016356"}


id: PBO:0003994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdm1","termid":"PBO:0003994"}


id: MOD:00504
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine.","definition_xrefs":["PubMed:6436247","PubMed:11955008","RESID:AA0059#var","PubMed:1326520","OMSSA:79","PubMed:1386601","PubMed:7543369","PubMed:11955007","Unimod:135#G"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine","synonyms":[{"name":"(cis,cis-delta 5, delta 8)-tetradecadienoyl","type":"related"},{"name":"Myristoyl+Delta:H(-4)","type":"related"},{"name":"N-(C14:2 aliphatic acyl)glycine","type":"exact"},{"name":"myristoylation-4H (two double bonds)","type":"exact"},{"name":"ntermpepmyristoyl4hg","type":"exact"}],"termid":"MOD:00504"}


id: PBO:0040072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain containing 1","termid":"PBO:0040072"}


id: PBO:0061532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE3 homolog, SMC5-SMC6 complex component","termid":"PBO:0061532"}


id: PBO:0035817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_trimethylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035817"}


id: PBO:0029925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ionizing_radiation_during_vegetative_growth","termid":"PBO:0029925"}


id: PBO:0017772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transmembrane transporter (predicted)","termid":"PBO:0017772"}


id: MONDO:0001040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process that affects the nasopharynx.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasopharyngeal disorder","termid":"MONDO:0004821"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngitis","secondary_identifiers":["UMLS:C0027441","NCIT:C34837","SCTID:47841006","ICD9:472.2","DOID:10460","MEDGEN:6527","MESH:D009304"],"synonyms":[{"name":"chronic nasopharyngitis","type":"exact"},{"name":"inflammation of nasopharynx","type":"exact"},{"name":"nasopharynx inflammation","type":"exact"}],"termid":"MONDO:0001040","xrefs":{"Monarch":{"xref_id":"0001040"}}}


id: GO:0099525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides and neuromodulators such as serotonin and dopamine) contained within a membrane-bounced dense in response to increased presynaptic cytosolic calcium levels.","definition_xrefs":["PMID:24653208","PMID:17553987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"},{"relation_name":"is_a","term_name":"neuronal dense core vesicle exocytosis","termid":"GO:0099011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"presynaptic dense core vesicle exocytosis","termid":"GO:0099525"}


id: PBO:0079226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 4","termid":"PBO:0079226"}


id: GO:0005662
data:
  {"annotated_genes":["SJAG_03722","SJAG_01698","SJAG_03855"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110687,114653,115383],"is_not":false,"summary":null,"term":"GO:0005662"}]},"cv_name":"cellular_component","definition":"A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa.","definition_xrefs":["PMID:9242902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear replisome","termid":"GO:0043601"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01698":null,"SJAG_03722":null,"SJAG_03855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"DNA replication factor A complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Replication_protein_A"],"synonyms":[{"name":"RPA","type":"exact"},{"name":"replication protein A","type":"exact"}],"termid":"GO:0005662","terms_by_termid":{"GO:0005662":null}}


id: GO:0030080
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that surrounds and transfers excitation energy directly to the bacterial reaction center; binds bacteriochlorophyll a and has a single absorption band between 870 and 890 nm.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"light-harvesting complex, core complex","termid":"GO:0030078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"B875 antenna complex","synonyms":[{"name":"LH1 complex","type":"exact"},{"name":"light harvesting complex I","type":"exact"}],"termid":"GO:0030080"}


id: GO:1903381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902235"},{"relation_name":"regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0036483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of ER stress-induced neuron apoptosis","type":"broad"},{"name":"regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of endoplasmic reticulum stress-induced neuron apoptosis","type":"broad"},{"name":"regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903381"}


id: PBO:0035949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_ferrichrome_level","termid":"PBO:0035949"}


id: MONDO:0003382
data:
  {"annotated_genes":["SJAG_00212","SJAG_00516","SJAG_02399","SJAG_00660","SJAG_01471","SJAG_03453","SJAG_00120","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86457,86456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[86304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[84390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[86039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[86038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[85224,85223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[85110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[86317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[85852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"},{"annotations":[84830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"A disease involving the eyelid.","direct_ancestors":[{"relation_name":"is_a","term_name":"eye adnexa disorder","termid":"MONDO:0000462"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_02399":null,"SJAG_03453":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"eyelid disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:H00","EFO:0009547","DOID:530","ICD9:374.9","MESH:D005141","NCIT:C26768","SCTID:60113004","ICD9:374.89","MEDGEN:41938","UMLS:C0015423"],"synonyms":[{"name":"disease of eyelid","type":"exact"},{"name":"disease or disorder of eyelid","type":"exact"},{"name":"disorder of eyelid","type":"exact"},{"name":"eyelid disease","type":"exact"},{"name":"eyelid disease or disorder","type":"exact"},{"name":"eyelid disorder","type":"exact"}],"termid":"MONDO:0003382","terms_by_termid":{"MONDO:0008097":null,"MONDO:0009053":null,"MONDO:0010208":null,"MONDO:0010572":null,"MONDO:0013051":null,"MONDO:0013755":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0003382"}}}


id: PR:Q10321
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component shg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.09","synonyms":[{"name":"COMPASS component shg1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component shg1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-shg1","type":"exact"},{"name":"complex proteins associated with set1 protein shg1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10321"}


id: PBO:0068926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 169, pseudogene","termid":"PBO:0068926"}


id: PR:O42997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27B12.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.07","synonyms":[{"name":"Spom972h-SPBC27B12.07","type":"exact"}],"termid":"PR:O42997"}


id: PBO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.32","termid":"PBO:0001490"}


id: GO:0003110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of norepinephrine from nerve endings modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by neuronal norepinephrine","synonyms":[{"name":"increased force of heart contraction by neuronal noradrenaline","type":"related"},{"name":"increased force of heart contraction by neuronal norepinephrine","type":"exact"}],"termid":"GO:0003110"}


id: MONDO:0010691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare X-linked genetic vitreoretinal condition characterized by abnormal retinal development with congenital blindness. Common associated manifestations include sensorineural hearing loss and developmental delay, intellectual disability and/or behavioral disorders.","definition_xrefs":["Orphanet:649"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Norrie disease","secondary_identifiers":["NCIT:C118634","ICD9:743.8","MEDGEN:75615","SCTID:15228007","UMLS:C0266526","DOID:0060844","icd11.foundation:676214590","MESH:C537849","OMIM:310600","GARD:7224","ICD10CM:H35.5","MedDRA:10069760","NORD:1514"],"synonyms":[{"name":"Anderson-Warburg syndrome","type":"related"},{"name":"Episkopi blindness","type":"exact"},{"name":"ND","type":"related"},{"name":"NDP","type":"related"},{"name":"Norrie disease","type":"exact"},{"name":"Norrie disease, X-linked recessive","type":"exact"},{"name":"Norrie syndrome","type":"related"},{"name":"Norrie-Warburg disease","type":"exact"},{"name":"Norrie-Warburg syndrome","type":"related"},{"name":"atrophia bulborum hereditaria","type":"exact"},{"name":"fetal iritis syndrome","type":"related"},{"name":"foetal iritis syndrome","type":"related"},{"name":"nd","type":"related"},{"name":"pseudoglioma","type":"related"}],"termid":"MONDO:0010691","xrefs":{"Monarch":{"xref_id":"0010691"}}}


id: PBO:0004756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk25 (predicted)","termid":"PBO:0004756"}


id: GO:0004878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C5a product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:pg","ISBN:0781735149","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement component C5a receptor activity","secondary_identifiers":["GO:0004944"],"synonyms":[{"name":"C5a anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004878"}


id: PBO:0065293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRRX2 antisense RNA 1","termid":"PBO:0065293"}


id: GO:0006324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration of one or more amino acid residues within a histone protein that takes place during, and results in a modification pattern characteristic of, S phase of the cell cycle.","definition_xrefs":["GOC:mah","PMID:9990026"],"gene_count":0,"genotype_count":0,"name":"obsolete S phase-specific histone modification (obsolete GO:0006324)","synonyms":[{"name":"S phase-specific histone modification","type":"exact"},{"name":"S-phase-specific histone modification","type":"exact"}],"termid":"GO:0006324"}


id: PBO:0043004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase, acidic pseudogene 2","termid":"PBO:0043004"}


id: GO:0016180
data:
  {"annotated_genes":["SJAG_04286","SJAG_04586","SJAG_00559","SJAG_00083","SJAG_04824","SJAG_01798","SJAG_01958","SJAG_01234","SJAG_04321","SJAG_00088","SJAG_03179","SJAG_01521","SJAG_04754","SJAG_04084","SJAG_00854","SJAG_03572","SJAG_04153","SJAG_03257","SJAG_04527","SJAG_01176","SJAG_00566","SJAG_02156","SJAG_00081","SJAG_01191","SJAG_02993","SJAG_04818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89843,107191,115187],"is_not":false,"summary":null,"term":"GO:0016180"},{"annotations":[94384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[103004,114581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034472"},{"annotations":[100350,89218,94550,113426,105451,105390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[103583,117430,104428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034473"},{"annotations":[101356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034474"},{"annotations":[96450,101270,104429,117431,105632,103584,87590,92280,95118,72896,101357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034475"},{"annotations":[89184,117432,98138,104430,103585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034476"},{"annotations":[92923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary small nuclear RNA (snRNA) transcript into a mature snRNA molecule. The primary function of snRNAs is processing pre-messenger RNA in the nucleus. They have also been shown to aid in the regulation of transcription factors (7SK RNA) or RNA polymerase II (B2 RNA), and maintaining the telomeres.","definition_xrefs":["PMID:15196465","PMID:31815536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00083":null,"SJAG_00088":null,"SJAG_00559":null,"SJAG_00566":null,"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01234":null,"SJAG_01521":null,"SJAG_01798":null,"SJAG_01958":null,"SJAG_02156":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03257":null,"SJAG_03572":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04286":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04586":null,"SJAG_04754":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016073"],"is_obsolete":false,"name":"snRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"snRNA maturation","type":"exact"},{"name":"snRNA production","type":"exact"}],"termid":"GO:0016180","terms_by_termid":{"GO:0016180":null,"GO:0031120":null,"GO:0034472":null,"GO:0034473":null,"GO:0034474":null,"GO:0034475":null,"GO:0034476":null,"GO:0034477":null,"GO:0120049":null}}


id: PBO:0078133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 13-1","termid":"PBO:0078133"}


id: PR:Q09894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.07c gene.","definition_xrefs":["UniProtKB:Q09894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.07c","synonyms":[{"name":"Spom972h-SPAC24B11.07c","type":"exact"}],"termid":"PR:Q09894"}


id: GO:0035443
data:
  {"annotated_genes":["SJAG_01983","SJAG_01344","SJAG_03497","SJAG_05213","SJAG_01660","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[112269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[117327,96247,95266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[94721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034775"},{"annotations":[102189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of a tripeptide across a membrane by means of some agent such as a transporter or pore. A tripeptide is a compound containing three amino acids linked together by peptide bonds.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"tripeptide transport","termid":"GO:0042939"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tripeptide transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tripeptide membrane transport","type":"exact"}],"termid":"GO:0035443","terms_by_termid":{"GO:0034775":null,"GO:0071996":null,"GO:0098709":null,"GO:0140207":null,"GO:0160007":null}}


id: PBO:0050382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 6","termid":"PBO:0050382"}


id: MONDO:1010517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly, non-human animal","termid":"MONDO:1010033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holoprosencephaly, horse","secondary_identifiers":["OMIA:000478-9796"],"termid":"MONDO:1010517","xrefs":{"Monarch":{"xref_id":"1010517"}}}


id: PBO:0001144
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein coiled-coil","termid":"PBO:0001144"}


id: FYPO:0003416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more cytoplasmic membrane-bounded vesicles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"cytoplasmic vesicles present in increased numbers","synonyms":[{"name":"additional cytoplasmic vesicles present during vegetative growth","type":"exact"},{"name":"cytoplasmic vesicles present in greater numbers","type":"exact"},{"name":"cytoplasmic vesicles present in increased numbers during mitotic cell cycle","type":"related"},{"name":"cytoplasmic vesicles present in increased numbers during vegetative growth","type":"exact"},{"name":"extra cytoplasmic vesicles during vegetative growth","type":"exact"}],"termid":"FYPO:0003416"}


id: PBO:0041808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 19","termid":"PBO:0041808"}


id: PBO:0091102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic pumilio family RNA-binding protein Puf5","termid":"PBO:0091102"}


id: MONDO:0013725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary nonpolyposis colon cancer in which the cause of the disease is a mutation in the MLH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Lynch syndrome","termid":"MONDO:0005835"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colorectal cancer, hereditary nonpolyposis, type 7","secondary_identifiers":["GARD:15799","MESH:C565777","OMIM:614385","UMLS:C1858380","MEDGEN:346893","DOID:0070276"],"synonyms":[{"name":"HNPCC7","type":"related"},{"name":"MLH3 hereditary nonpolyposis colon cancer","type":"exact"},{"name":"colorectal cancer, hereditary nonpolyposis, type 7","type":"exact"},{"name":"hereditary nonpolyposis colon cancer caused by mutation in MLH3","type":"exact"}],"termid":"MONDO:0013725","xrefs":{"Monarch":{"xref_id":"0013725"}}}


id: SO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which the function of a gene product is unknown with respect to a reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function_uncertain_variant","synonyms":[{"name":"function uncertain variant","type":"exact"},{"name":"function_uncertain_variant","type":"exact"}],"termid":"SO:0002220"}


id: MONDO:0000552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma of the breast arising from the lobules. This is a relatively uncommon carcinoma, represents approximately 10% of the breast adenocarcinomas and is often bilateral or multifocal.","definition_xrefs":["NCIT:C3771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast lobular carcinoma","secondary_identifiers":["UMLS:C0206692","DOID:0050938","SCTID:278054005","ICDO:8520/3","EFO:0008509","MEDGEN:64634"],"synonyms":[{"name":"carcinoma of lobule of mammary gland","type":"exact"},{"name":"lobular adenocarcinoma","type":"exact"},{"name":"lobular breast carcinoma","type":"exact"},{"name":"lobular carcinoma","type":"exact"},{"name":"lobular carcinoma of breast","type":"exact"},{"name":"lobular carcinoma of the breast","type":"exact"},{"name":"lobule of mammary gland carcinoma","type":"exact"}],"termid":"MONDO:0000552","xrefs":{"Monarch":{"xref_id":"0000552"}}}


id: GO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["GOC:add","PMID:14754397","PMID:12905029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"negatively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte clearance","synonyms":[{"name":"negative regulation of RBC clearance","type":"exact"},{"name":"negative regulation of neocytolysis","type":"narrow"},{"name":"negative regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034107"}


id: PBO:0078011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 1 (non-functional)","termid":"PBO:0078011"}


id: PATO:0000030
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000030 enzyme composition (obsolete PATO:0000030)","termid":"PATO:0000030"}


id: PBO:0026711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_complex_binding","termid":"PBO:0026711"}


id: PBO:0089016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop6/Pop7 ortholog","termid":"PBO:0089016"}


id: SO:0001218
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that derives from another organism, via the use of recombinant DNA technology.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"transgenic","termid":"SO:0000781"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic_insertion","synonyms":[{"name":"transgenic insertion","type":"exact"}],"termid":"SO:0001218"}


id: MONDO:0003695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon benign neoplasm of glandular epithelium characterized by the presence of clear or hobnail cells within a dense fibrous stroma.","definition_xrefs":["NCIT:C40085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"clear cell adenofibroma","termid":"MONDO:0003460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian clear cell adenofibroma","secondary_identifiers":["MEDGEN:309502","UMLS:C1518694","DOID:5897"],"synonyms":[{"name":"clear cell adenofibroma of ovary","type":"exact"},{"name":"ovarian clear cell adenofibroma","type":"exact"},{"name":"ovary clear cell adenofibroma","type":"exact"}],"termid":"MONDO:0003695","xrefs":{"Monarch":{"xref_id":"0003695"}}}


id: GO:0075279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the formation of a uredinium, a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uredinium development","synonyms":[{"name":"development of uredium","type":"exact"}],"termid":"GO:0075279"}


id: PBO:0042368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD177 molecule","termid":"PBO:0042368"}


id: PBO:0045348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase","termid":"PBO:0045348"}


id: PBO:0056159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACROD2 intronic transcript 1","termid":"PBO:0056159"}


id: PBO:0050407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 9","termid":"PBO:0050407"}


id: PR:Q9P3U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght8 gene.","definition_xrefs":["UniProtKB:Q9P3U7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity hexose transporter ght8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.06c","synonyms":[{"name":"Spom972h-ght8","type":"exact"},{"name":"hexose transporter 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U7"}


id: MONDO:0010905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 1","secondary_identifiers":["GARD:10651","OMIM:600624","DOID:0111009","MEDGEN:371596","UMLS:C1833564","MESH:C563469"],"synonyms":[{"name":"CORD1","type":"exact"},{"name":"CRD1","type":"exact"},{"name":"Crd1","type":"related"},{"name":"cone-rod dystrophy 1","type":"exact"},{"name":"cone-rod dystrophy type 1","type":"exact"},{"name":"cone-rod retinal dystrophy-1","type":"exact"}],"termid":"MONDO:0010905","xrefs":{"Monarch":{"xref_id":"0010905"}}}


id: GO:1903914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fusion of virus membrane with host plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:23575248","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of fusion of virus membrane with host plasma membrane","termid":"GO:1903913"},{"relation_name":"negatively_regulates","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"},{"relation_name":"negatively_regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fusion of virus membrane with host plasma membrane","synonyms":[{"name":"down regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"down regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"down regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"down regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"down regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"down regulation of viral penetration via membrane fusion","type":"exact"},{"name":"down regulation of viral-cell fusion molecule activity","type":"related"},{"name":"down-regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"down-regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"down-regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"down-regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"down-regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"down-regulation of viral penetration via membrane fusion","type":"exact"},{"name":"down-regulation of viral-cell fusion molecule activity","type":"related"},{"name":"downregulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"downregulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"downregulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"downregulation of viral envelope fusion with host membrane","type":"exact"},{"name":"downregulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"downregulation of viral penetration via membrane fusion","type":"exact"},{"name":"downregulation of viral-cell fusion molecule activity","type":"related"},{"name":"inhibition of fusion of virus membrane with host plasma membrane","type":"narrow"},{"name":"inhibition of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"inhibition of viral envelope fusion with host cell membrane","type":"narrow"},{"name":"inhibition of viral envelope fusion with host membrane","type":"narrow"},{"name":"inhibition of viral envelope fusion with host plasma membrane","type":"narrow"},{"name":"inhibition of viral penetration via membrane fusion","type":"narrow"},{"name":"inhibition of viral-cell fusion molecule activity","type":"related"},{"name":"negative regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"negative regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"negative regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"negative regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"negative regulation of viral penetration via membrane fusion","type":"exact"},{"name":"negative regulation of viral-cell fusion molecule activity","type":"related"}],"termid":"GO:1903914"}


id: GO:0102599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-amyrin + O2 + H+ + NAD(P)H = 12,13beta-epoxy-beta-amyrin + H2O + NAD(P).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome P450 dependent beta-amyrin 12,13beta-epoxidase activity (obsolete GO:0102599)","termid":"GO:0102599"}


id: FYPO:0001228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in vegetative growth phase of the life cycle, in which the amount of protein measured in the cell nucleus is higher than normal during a cellular response to hydrogen peroxide. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear protein level during vegetative growth","termid":"FYPO:0000255"},{"relation_name":"is_a","term_name":"increased protein level during cellular response to hydrogen peroxide","termid":"FYPO:0001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0002403","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased nuclear protein level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased nuclear protein level during cellular response to H2O2","type":"exact"},{"name":"increased nuclear protein level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased nuclear protein level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased protein level in nucleus during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear accumulation of protein during cellular response to hydrogen peroxide","type":"exact"},{"name":"nuclear protein accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear protein accumulation during cellular response to hydrogen peroxide during vegetative growth","type":"related"},{"name":"nuclear protein accumulation in response to hydrogen peroxide","type":"related"}],"termid":"FYPO:0001228"}


id: FYPO:0006759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome organization is abnormal during the meiotic cell cycle.","definition_xrefs":["GO:0070192","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic chromosome organization","synonyms":[{"name":"abnormal chromosome organization during meiotic cell cycle","type":"exact"},{"name":"abnormal chromosome organization involved in meiotic cell cycle","type":"exact"},{"name":"abnormal meiotic chromosome organisation","type":"exact"}],"termid":"FYPO:0006759"}


id: PBO:0049461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2 pseudogene 1","termid":"PBO:0049461"}


id: PBO:0081600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 524","termid":"PBO:0081600"}


id: PBO:0012600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin","termid":"PBO:0012600"}


id: PBO:0055689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipopolysaccharide induced TNF factor","termid":"PBO:0055689"}


id: PBO:0011106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome C oxidase transmembrane region (subunit 2 variant)","termid":"PBO:0011106"}


id: GO:0060041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.","definition_xrefs":["GOC:dph","ISBN:0815340729","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina development in camera-type eye","secondary_identifiers":["GO:0002073"],"synonyms":[{"name":"retina development in camera-style eye","type":"exact"},{"name":"retinal development","type":"related"}],"termid":"GO:0060041"}


id: GO:0061097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}


id: MONDO:0008344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary edema of mountaineers, susceptibility to","secondary_identifiers":["ICD9:416.8","MEDGEN:83314","OMIM:178400","MESH:C535833","SCTID:233954004","UMLS:C0340552","ICD9:993.2"],"synonyms":[{"name":"HAPH","type":"related"},{"name":"high altitude pulmonary hypertension","type":"related"},{"name":"pulmonary edema of mountaineers","type":"related"},{"name":"pulmonary edema of mountaineers, susceptibility to","type":"exact"},{"name":"pulmonary oedema of mountaineers","type":"related"}],"termid":"MONDO:0008344","xrefs":{"Monarch":{"xref_id":"0008344"}}}


id: PBO:0079807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B28","termid":"PBO:0079807"}


id: PR:G2TRU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.20","synonyms":[{"name":"Spom972h-SPCC18.20","type":"exact"}],"termid":"PR:G2TRU1"}


id: GO:0140448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of a peptide bond in a precursor form of a signaling receptor ligand, resulting in the mature (active) form of the ligand.","definition_xrefs":["PMID:29247995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"signaling receptor ligand precursor processing","secondary_identifiers":["GO:0035638"],"synonyms":[{"name":"ligand maturation","type":"narrow"},{"name":"signal maturation","type":"related"}],"termid":"GO:0140448"}


id: PBO:0064697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 33","termid":"PBO:0064697"}


id: MONDO:0003458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid, benign neoplasm that arises from the endometrial cavity. It is characterized by the presence of a mesenchymal core component and an epithelial component that forms a lining on the mesenchymal core.","definition_xrefs":["NCIT:C6337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"},{"relation_name":"is_a","term_name":"benign neoplasm of corpus uteri","termid":"MONDO:0021525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus adenofibroma","secondary_identifiers":["DOID:5475","UMLS:C1336901","MEDGEN:277849"],"synonyms":[{"name":"adenofibroma of body of uterus","type":"exact"},{"name":"adenofibroma of corpus uteri","type":"exact"},{"name":"adenofibroma of the body of uterus","type":"exact"},{"name":"adenofibroma of the corpus uteri","type":"exact"},{"name":"adenofibroma of the uterine body","type":"exact"},{"name":"adenofibroma of the uterine corpus","type":"exact"},{"name":"adenofibroma of uterine body","type":"exact"},{"name":"adenofibroma of uterine corpus","type":"related"},{"name":"body of uterus adenofibroma","type":"exact"},{"name":"corpus uteri adenofibroma","type":"exact"},{"name":"uterine body adenofibroma","type":"exact"}],"termid":"MONDO:0003458","xrefs":{"Monarch":{"xref_id":"0003458"}}}


id: PBO:0038599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aggrecan","termid":"PBO:0038599"}


id: PBO:0062348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily L member 1 pseudogene","termid":"PBO:0062348"}


id: PBO:0049342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I antisense RNA 1","termid":"PBO:0049342"}


id: PBO:0086992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for splicing of the group I intron bI5 of the COB pre-mRNA; nuclear-encoded mitochondrial protein that binds to the RNA to promote splicing; also involved in but not essential for splicing of the COB bI2 intron and the intron in the 21S rRNA gene","termid":"PBO:0086992"}


id: GO:0090507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylethylamine that contribute to synaptic transmission.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylethylamine metabolic process","termid":"GO:0042443"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phenylethylamine metabolic process involved in synaptic transmission","termid":"GO:0090507"}


id: PBO:0087694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes protein asparagine-linked glycosylation; type I membrane protein required for incorporation of Ost3p or Ost6p into the OST complex","termid":"PBO:0087694"}


id: GO:0140768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An enzyme-substrate adaptor that bings together a protein ADP-ribosyl transferase and its substrate.","definition_xrefs":["PMID:32028527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-substrate adaptor activity","termid":"GO:0140767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"protein ADP-ribosyltransferase-substrate adaptor activity","termid":"GO:0140768"}


id: PR:Q9P6I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.10c","secondary_identifiers":["UniProtKB:Q9P6I0"],"synonyms":[{"name":"AsnRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NARS2","type":"exact"},{"name":"asparaginyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I0"}


id: FYPO:0008100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 5S rRNA measured in a cell is higher than normal during phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased polyadenylated 5S rRNA level during cellular response to phosphate starvation","termid":"FYPO:0008100"}


id: GO:0071106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which adenosine 3',5'-bisphosphate is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"adenosine 3',5'-bisphosphate transmembrane transport","synonyms":[{"name":"adenosine 3',5'-bisphosphate membrane transport","type":"exact"},{"name":"adenosine 3',5'-diphosphate transport","type":"exact"},{"name":"adenosine 3'-phosphate-5'-phosphate transmembrane transport","type":"exact"}],"termid":"GO:0071106"}


id: PBO:0072464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 28","termid":"PBO:0072464"}


id: PR:O94498
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C18E5.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.08","synonyms":[{"name":"Spom972h-SPBC18E5.08","type":"exact"}],"termid":"PR:O94498"}


id: MONDO:0030077
data:
  {"annotated_genes":["SJAG_02618"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84744],"is_not":false,"summary":null,"term":"MONDO:0030077"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vertebral-cardiac-renal anomalies syndrome","termid":"MONDO:0020831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02618":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005267"],"is_obsolete":false,"name":"vertebral, cardiac, renal, and limb defects syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18510","UMLS:C5394250","OMIM:618845","MEDGEN:1709064"],"synonyms":[{"name":"Congenital Nad Deficiency Disorder 3","type":"exact"},{"name":"VCRL3","type":"exact"},{"name":"VERTEBRAL, CARDIAC, RENAL, AND LIMB DEFECTS SYNDROME 3","type":"exact"},{"name":"vertebral, cardiac, renal, and limb defects syndrome 3","type":"exact"}],"termid":"MONDO:0030077","terms_by_termid":{"MONDO:0030077":null},"xrefs":{"Monarch":{"xref_id":"0030077"}}}


id: PBO:0041878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis associated TTC17 interacting protein","termid":"PBO:0041878"}


id: PBO:0109125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin zinc finger protein 1","termid":"PBO:0109125"}


id: PBO:0029031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_telomere","termid":"PBO:0029031"}


id: FYPO:0002929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of abnormal length.","definition_xrefs":["PMID:24081329","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal poly(A) tail length","synonyms":[{"name":"abnormal polyA sequence length","type":"exact"},{"name":"abnormal polyA tail length","type":"exact"}],"termid":"FYPO:0002929"}


id: PBO:0054364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1757","termid":"PBO:0054364"}


id: GO:0051057
data:
  {"annotated_genes":["SJAG_01805","SJAG_03936","SJAG_04776","SJAG_00329","SJAG_03048","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046579"},{"annotations":[101569,93003,109667,86751,89207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00329":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03936":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of small GTPase mediated signal transduction","type":"narrow"},{"name":"positive regulation of small GTPase-mediated signal transduction","type":"exact"},{"name":"stimulation of small GTPase mediated signal transduction","type":"narrow"},{"name":"up regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"up-regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"upregulation of small GTPase mediated signal transduction","type":"exact"}],"termid":"GO:0051057","terms_by_termid":{"GO:0031031":null,"GO:0046579":null}}


id: GO:0071461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating redox state. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to redox state","termid":"GO:0051775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to redox state","synonyms":[{"name":"cellular redox signal response","type":"exact"}],"termid":"GO:0071461"}


id: PBO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal fragment of Rec8 generated by separase-mediated cleavage is an endogenous substrate of the N-end rule pathway","termid":"PBO:0015687"}


id: PR:O94479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.12c","synonyms":[{"name":"FXNA-related family protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1919.12c","type":"exact"}],"termid":"PR:O94479"}


id: PBO:0079636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 7","termid":"PBO:0079636"}


id: PBO:0052492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 6","termid":"PBO:0052492"}


id: MONDO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progeroid syndrome (obsolete MONDO:0000146)","termid":"MONDO:0000146","xrefs":{"Monarch":{"xref_id":"0000146"}}}


id: PBO:0111915
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP2/UBAP2L","termid":"PBO:0111915"}


id: PBO:0005734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set5 (predicted)","termid":"PBO:0005734"}


id: MONDO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late yaws is the tertiary, non-contagious stage of yaws, endemic tropical treponemal nonvenereal infection. Late yaws is characterized by destructive and deforming lesions of the skin, bones, and joints.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yaws","termid":"MONDO:0006019"},{"relation_name":"is_a","term_name":"cutaneous syphilis","termid":"MONDO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"late yaws","secondary_identifiers":["ICD10CM:A66.4","MEDGEN:276026","NCIT:C41354","DOID:10567","SCTID:186968004","ICD9:102.1","UMLS:C1517744","ICD9:102.4"],"synonyms":[{"name":"gummata and ulcers due to yaws","type":"exact"},{"name":"gummata of yaws","type":"exact"},{"name":"gummatous frambeside","type":"exact"},{"name":"multiple papillomata due to yaws and wet crab yaws","type":"exact"},{"name":"nodular late yaws","type":"exact"},{"name":"ulcers of yaws","type":"exact"},{"name":"yaws gummata and ulcers","type":"exact"}],"termid":"MONDO:0001066","xrefs":{"Monarch":{"xref_id":"0001066"}}}


id: GO:0044209
data:
  {"annotated_genes":["SJAG_01859","SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92733,115973],"is_not":false,"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of adenosine monophosphate (AMP) from derivatives of it (either adenine, ADP or adenosine 3',5'-bisphosphate) without de novo synthesis.","definition_xrefs":["PMID:9864350","GOC:ecd","GOC:jl","PMID:8917457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AMP biosynthetic process","termid":"GO:0006167"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"AMP salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AMP biosynthetic process via salvage pathway","type":"exact"},{"name":"adenosine monophosphate salvage","type":"exact"}],"termid":"GO:0044209","terms_by_termid":{"GO:0044209":null}}


id: MONDO:0800181
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008858"}]},"cv_name":"mondo","definition":"Any primary mitochondrial disease in which the cause of the disease is monoallelic or biallelic variants in the OPA1 gene. While optic atrophy is present in most affected cases, OPA1 is a mitochondrial protein and thus features of this disease include abnormal mitochondrial morphology and multiple mitochondrial DNA deletions, and can affect other organ systems and. Extraocular features can include progressive sensorineural hearing impairment, cognitive impairment, peripheral neuropathy, myopathy, ragged-red muscle fibers, and exercise-induced lactic acidemia, while additional ocular features can include progressive visual loss, central scotoma, and color vision abnormalities.","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004069"],"is_obsolete":false,"name":"OPA1-related optic atrophy with or without extraocular features","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800181","terms_by_termid":{"MONDO:0008858":null},"xrefs":{"Monarch":{"xref_id":"0800181"}}}


id: MONDO:0851102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary artery disease","secondary_identifiers":["DOID:60001"],"termid":"MONDO:0851102","xrefs":{"Monarch":{"xref_id":"0851102"}}}


id: GO:0009125
data:
  {"annotated_genes":["SJAG_01055","SJAG_01974"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116307,115236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleoside monophosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside monophosphate breakdown","type":"exact"},{"name":"nucleoside monophosphate catabolism","type":"exact"},{"name":"nucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009125","terms_by_termid":{"GO:0009159":null}}


id: GO:0021543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pallium over time, from its formation to the mature structure. The pallium is the roof region of the telencephalon.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","PMID:12626695","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pallium development","termid":"GO:0021543"}


id: PBO:0088287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein But1","termid":"PBO:0088287"}


id: PBO:0043427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit beta 1","termid":"PBO:0043427"}


id: PBO:0017994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-site clamp monopolin complex subunit Mde4","termid":"PBO:0017994"}


id: GO:0050201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-fucose + ATP = beta-L-fucose 1-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:13241","EC:2.7.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"fucokinase activity","secondary_identifiers":["KEGG_REACTION:R03161","MetaCyc:FUCOKINASE-RXN","Reactome:R-HSA-6787540"],"synonyms":[{"name":"ATP:6-deoxy-L-galactose 1-phosphotransferase activity","type":"related"},{"name":"ATP:beta-L-fucose 1-phosphotransferase activity","type":"related"},{"name":"L-fucokinase activity","type":"related"},{"name":"L-fucose kinase activity","type":"related"},{"name":"fucokinase (phosphorylating) activity","type":"related"},{"name":"fucose kinase activity","type":"related"}],"termid":"GO:0050201"}


id: PBO:0040368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 5","termid":"PBO:0040368"}


id: MONDO:0006007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal flow of urine from the urinary bladder back into the ureters.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureteral disorder","termid":"MONDO:0001926"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux","secondary_identifiers":["EFO:0007536","DOID:9620","MESH:D014718","SCTID:197811007","UMLS:C0042580","HP:0000076","ICD9:593.7","icd11.foundation:2142055506","MEDGEN:21852","NANDO:2200179"],"synonyms":[{"name":"vesico-ureteral reflux","type":"exact"},{"name":"vesicoureteral reflux","type":"exact"},{"name":"vesicoureteral reflux (disease)","type":"exact"}],"termid":"MONDO:0006007","xrefs":{"Monarch":{"xref_id":"0006007"}}}


id: PBO:0049233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM5 antisense RNA 1","termid":"PBO:0049233"}


id: GO:0052503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the symbiont calcium-dependent protein kinase pathway during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway (obsolete GO:0052503)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway","type":"exact"},{"name":"positive regulation of defense-related symbiont CDPK pathway by organism","type":"exact"}],"termid":"GO:0052503"}


id: FYPO:0008199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 at the centromere outer repeat is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0008199"}


id: SO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The promoter of a cryptic gene.","definition_xrefs":["GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"},{"relation_name":"part_of","term_name":"cryptic_gene","termid":"SO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_promoter","synonyms":[{"name":"cryptic promoter","type":"exact"}],"termid":"SO:0002310"}


id: PBO:0060995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nescient helix-loop-helix 2","termid":"PBO:0060995"}


id: MONDO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor characterized by the presence of an embryonal carcinoma component and a teratoma component.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","termid":"MONDO:0002510"},{"relation_name":"is_a","term_name":"mixed germ cell tumor","termid":"MONDO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"teratocarcinoma","secondary_identifiers":["ICDO:9081/3","DOID:3305","UMLS:C0206664","MESH:D018243","MEDGEN:104913","NCIT:C3756"],"synonyms":[{"name":"mixed embryonal carcinoma and teratoma","type":"exact"},{"name":"teratocarcinoma","type":"exact"},{"name":"teratocarcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002599","xrefs":{"Monarch":{"xref_id":"0002599"}}}


id: MONDO:0018764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephalic primordial dwarfism due to RTTN deficiency is a rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by primary microcephaly, profound short stature, moderate to severe intellectual disability, global developmental delay, craniofacial dysmorphism (e.g. sloping forehead, high and broad nasal bridge) and variable brain malformations, including simplified gyration, pachygyria, polymicrogyria, reduced sulcation, dysgenesis of corpus callosum and deformed ventricles. Renal anomalies, bilateral hearing loss, multiple joint contractures, severe failure to thrive and a sacral lesion cephalad to the gluteal crease have also been reported.","definition_xrefs":["Orphanet:468631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalic primordial dwarfism due to RTTN deficiency","secondary_identifiers":["GARD:17841","OMIM:614833","UMLS:C3553831","MEDGEN:766745"],"termid":"MONDO:0018764","xrefs":{"Monarch":{"xref_id":"0018764"}}}


id: MONDO:1011806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune-mediated myositis, non-human animal","secondary_identifiers":["OMIA:002141"],"termid":"MONDO:1011806","xrefs":{"Monarch":{"xref_id":"1011806"}}}


id: GO:0018673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzoyl-CoA + 2 NADPH + 2 H+ + O2 = 2-amino-5-oxocyclohex-1-enecarboxyl-CoA + H2O + 2 NADP+.","definition_xrefs":["EC:1.14.13.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"anthraniloyl-CoA monooxygenase activity","secondary_identifiers":["MetaCyc:ANTHRANILOYL-COA-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0568"],"synonyms":[{"name":"2-aminobenzoyl-CoA monooxygenase/reductase activity","type":"related"},{"name":"2-aminobenzoyl-CoA,NAD(P)H:oxygen oxidoreductase (de-aromatizing)","type":"related"},{"name":"anthraniloyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0018673"}


id: MONDO:0014602
data:
  {"annotated_genes":["SJAG_03681","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84500,84501],"is_not":false,"summary":null,"term":"MONDO:0014602"}]},"cv_name":"mondo","definition":"An autosomal dominant intellectual developmental disorder that has material basis in an autosomal dominant mutation of the PPP2R5D gene on chromosome 6p21.1.","definition_xrefs":["DOID:0070065"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"},{"relation_name":"is_a","term_name":"Houge-Janssens syndrome","termid":"MONDO:0957553"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03353":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"Hogue-Janssens syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616355","Orphanet:457279","UMLS:C5779996","GARD:17802","MEDGEN:1830493"],"synonyms":[{"name":"MRD35","type":"exact"},{"name":"autosomal dominant intellectual disability 35","type":"exact"},{"name":"autosomal dominant mental retardation 35","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 35","type":"related"},{"name":"intellectual disability, autosomal dominant 35","type":"related"},{"name":"intellectual disability, autosomal dominant type 35","type":"exact"},{"name":"intellectual disability-macrocephaly-hypotonia-behavioral abnormalities syndrome","type":"exact"},{"name":"mental retardation, autosomal dominant 35","type":"related"},{"name":"mental retardation, autosomal dominant type 35","type":"exact"}],"termid":"MONDO:0014602","terms_by_termid":{"MONDO:0014602":null},"xrefs":{"Monarch":{"xref_id":"0014602"}}}


id: PBO:0001137
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA in intron","termid":"PBO:0001137"}


id: MONDO:1011490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 6 deficiency that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement component 6 deficiency, non-human animal","termid":"MONDO:1011423"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 6 deficiency, rabbit","secondary_identifiers":["OMIA:001624-9986"],"synonyms":[{"name":"C6 deficiency, rabbit","type":"exact"}],"termid":"MONDO:1011490","xrefs":{"Monarch":{"xref_id":"1011490"}}}


id: MONDO:0044113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A manifestation of systemic lupus erythematosus with a widespread vesiculobullous eruption.","definition_xrefs":["NCIT:C117104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous lupus erythematosus","termid":"MONDO:0005282"},{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"bullous systemic lupus erythematosus","secondary_identifiers":["MEDGEN:592738","SCTID:239889005","UMLS:C0409977","Orphanet:46489"],"synonyms":[{"name":"BSLE","type":"exact"},{"name":"bullous systemic lupus erythematosus","type":"exact"}],"termid":"MONDO:0044113","xrefs":{"Monarch":{"xref_id":"0044113"}}}


id: PBO:0063208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 4","termid":"PBO:0063208"}


id: MONDO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidermodysplasia verruciformis (obsolete MONDO:0001796)","termid":"MONDO:0001796","xrefs":{"Monarch":{"xref_id":"0001796"}}}


id: FYPO:0002349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly begins later than normal.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of stress granule assembly during vegetative growth","synonyms":[{"name":"delayed onset of cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"delayed onset of stress granule assembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of stress granule formation during vegetative growth","type":"exact"},{"name":"delayed stress granule assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002349"}


id: GO:1904913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:rph","PMID:26586433","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"regulation of establishment of macromolecular complex localization to telomere","type":"related"}],"termid":"GO:1904913"}


id: PBO:0065180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRORY Y-linked lncRNA","termid":"PBO:0065180"}


id: PBO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joining chain of multimeric IgA and IgM pseudogene 1","termid":"PBO:0052005"}


id: PBO:0091268
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(1)","termid":"PBO:0091268"}


id: MONDO:0034673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectrodactyly with and without other manifestations (obsolete MONDO:0034673)","termid":"MONDO:0034673","xrefs":{"Monarch":{"xref_id":"0034673"}}}


id: PBO:0054506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1906","termid":"PBO:0054506"}


id: GO:0072679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a thymocyte through distinct intrathymic niches (e.g. medulla, cortex), where it receives a unique set of developmental cues required for T-cell development.","definition_xrefs":["GOC:BHF","GOC:mah","CL:0000893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymocyte migration","synonyms":[{"name":"immature T cell migration","type":"related"},{"name":"immature T lymphocyte migration","type":"related"},{"name":"immature T-cell migration","type":"related"},{"name":"immature T-lymphocyte migration","type":"related"},{"name":"thymic lymphocyte migration","type":"exact"}],"termid":"GO:0072679"}


id: PBO:0077521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 236","termid":"PBO:0077521"}


id: PBO:0054131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1497","termid":"PBO:0054131"}


id: PBO:0079338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 23","termid":"PBO:0079338"}


id: GO:0035891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism out of a cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19325115","GOC:rs","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from host cell","secondary_identifiers":["GO:0035890"],"synonyms":[{"name":"ejection from host","type":"related"},{"name":"ejection from host cell","type":"related"},{"name":"exit from host","type":"related"},{"name":"host cell exit","type":"exact"}],"termid":"GO:0035891"}


id: PBO:0044457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 36, pseudogene","termid":"PBO:0044457"}


id: PBO:0055826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 1","termid":"PBO:0055826"}


id: PBO:0063792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20 like 1","termid":"PBO:0063792"}


id: GO:0031164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the contractile vacuole.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar membrane","termid":"GO:0005774"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"contractile vacuole","termid":"GO:0000331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"contractile vacuolar membrane","synonyms":[{"name":"contractile vacuole membrane","type":"exact"}],"termid":"GO:0031164"}


id: PBO:0050117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 27","termid":"PBO:0050117"}


id: MONDO:0017850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sirenomelia is a rare, genetic, developmental defect during embryogenesis disorder characterized by fusion of the lower limbs and associated with some degree of lower extremity reduction and persistent vitelline artery. Patients also present severe malformations of the musculoskeletal system (e.g. sacral agenesis), as well as the urogenital and lower gastrointestinal tracts (e.g. renal agenesis, absent bladder, rectal/anal atresia, and absent internal genitalia). Most cases are stillborn, or die during, or shortly after, birth.","definition_xrefs":["Orphanet:3169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial caudal dysgenesis","termid":"MONDO:0010831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirenomelia","secondary_identifiers":["UMLS:C0037205","MedDRA:10049216","NORD:1720","icd11.foundation:473306797","SCTID:67254002","MEDGEN:52357","GARD:7652","NCIT:C118455"],"synonyms":[{"name":"Fused legs and feet","type":"related"},{"name":"Sirenomelus","type":"related"},{"name":"mermaid malformation","type":"related"},{"name":"mermaid syndrome","type":"related"},{"name":"sirenomelia sequence","type":"related"},{"name":"symmelia","type":"exact"}],"termid":"MONDO:0017850","xrefs":{"Monarch":{"xref_id":"0017850"}}}


id: GO:1904828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrogen sulfide biosynthetic process.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:22034194","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of hydrogen sulfide biosynthetic process","termid":"GO:1904826"},{"relation_name":"positively_regulates","term_name":"hydrogen sulfide biosynthetic process","termid":"GO:0070814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen sulfide biosynthetic process","synonyms":[{"name":"activation of hydrogen sulfide anabolism","type":"narrow"},{"name":"activation of hydrogen sulfide biosynthesis","type":"narrow"},{"name":"activation of hydrogen sulfide biosynthetic process","type":"narrow"},{"name":"activation of hydrogen sulfide formation","type":"narrow"},{"name":"activation of hydrogen sulfide synthesis","type":"narrow"},{"name":"activation of hydrogen sulphide biosynthesis","type":"narrow"},{"name":"activation of hydrogen sulphide biosynthetic process","type":"narrow"},{"name":"positive regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"positive regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"positive regulation of hydrogen sulfide formation","type":"exact"},{"name":"positive regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"positive regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"positive regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"up regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"up regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"up regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"up regulation of hydrogen sulfide formation","type":"exact"},{"name":"up regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"up regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"up regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"up-regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"up-regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"up-regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"up-regulation of hydrogen sulfide formation","type":"exact"},{"name":"up-regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"up-regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"up-regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"upregulation of hydrogen sulfide anabolism","type":"exact"},{"name":"upregulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"upregulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"upregulation of hydrogen sulfide formation","type":"exact"},{"name":"upregulation of hydrogen sulfide synthesis","type":"exact"},{"name":"upregulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"upregulation of hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:1904828"}


id: GO:0048265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli.","definition_xrefs":["PMID:12843304","Wikipedia:Pain","PMID:10203867","PMID:12723742","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pain","secondary_identifiers":["GO:0048267"],"synonyms":[{"name":"physiological response to pain","type":"exact"}],"termid":"GO:0048265"}


id: FYPO:0007908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lesser extent than normal when a cell is subject to amino acid starvation.","definition_xrefs":["PMID:34805795","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during amino acid starvation","termid":"FYPO:0007908"}


id: PBO:0047489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin reductase","termid":"PBO:0047489"}


id: GO:0160097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle, is driven by ATP hydrolysis.","definition_xrefs":["PMID:25013168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"reverse gyrase activity","secondary_identifiers":["WIKIPEDIA:Reverse_gyrase"],"termid":"GO:0160097"}


id: FYPO:0005596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle is increased during the first meiotic nuclear division.","definition_xrefs":["PMID:26696398","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to spindle during meiosis I","synonyms":[{"name":"increased protein localisation to spindle during meiosis I","type":"exact"},{"name":"increased protein localization to meiosis I spindle","type":"exact"},{"name":"increased protein localization to meiotic spindle during meiosis I","type":"exact"},{"name":"increased protein localization to spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005596"}


id: PBO:0059787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 13","termid":"PBO:0059787"}


id: PATO:0000684
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000684 absolute incidence value (obsolete PATO:0000684)","termid":"PATO:0000684"}


id: GO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of norepinephrine or epinephrine in the bloodstream.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine catabolic process","termid":"GO:0042419"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-epinephrine catabolic process in blood stream","synonyms":[{"name":"noradrenaline-adrenalin catabolic process in blood stream","type":"exact"}],"termid":"GO:0001995"}


id: PBO:0083473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPM1","termid":"PBO:0083473"}


id: PBO:0078335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-7","termid":"PBO:0078335"}


id: PBO:0088245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial (2Fe-2S) cluster assembly co-chaperone Jac1","termid":"PBO:0088245"}


id: PBO:0004314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-synthase (predicted)","termid":"PBO:0004314"}


id: GO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of immune complex clearance by erythrocytes. The process often starts with binding of complement receptor 1 (CR1) on the surface of erythrocytes to a complement coated immune complex. The complex bound to erythrocyte CR1 is then transported to the liver or spleen where it is presented to phagocytes. The process ends when the complex is removed from CR1, allowing the erythrocyte to return to general circulation.","definition_xrefs":["PMID:24022490","GOC:add","PMID:11414352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex clearance","termid":"GO:0002434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance by erythrocytes","secondary_identifiers":["Wikipedia:Immune_complex"],"synonyms":[{"name":"immune complex clearance by RBCs","type":"exact"},{"name":"immune complex clearance by red blood cells","type":"exact"}],"termid":"GO:0002435"}


id: GO:0044780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"bacterial-type flagellum organization","termid":"GO:0044781"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"bacterial-type flagellum assembly","synonyms":[{"name":"bacterial flagellum assembly","type":"exact"}],"termid":"GO:0044780"}


id: PBO:0003730
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stability regulated by oxygen","termid":"PBO:0003730"}


id: MONDO:0012700
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84428],"is_not":false,"summary":null,"term":"MONDO:0012700"}]},"cv_name":"mondo","definition":"Distal renal tubular acidosis (dRTA) with anemia is a very rare form of distal renal tubular acidosis (dRTA) characterized by a defect in renal acidification and hereditary hemolytic anemia.","definition_xrefs":["Orphanet:93610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"distal renal tubular acidosis","termid":"MONDO:0015827"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005240"],"is_obsolete":false,"name":"renal tubular acidosis, distal, 4, with hemolytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:611590","MEDGEN:1771439","UMLS:C5436235","GARD:12354"],"synonyms":[{"name":"RTA, distal, autosomal recessive, with hemolytic Anaemia","type":"related"},{"name":"RTA, distal, autosomal recessive, with hemolytic Anemia","type":"related"},{"name":"dRTA with anaemia","type":"exact"},{"name":"dRTA with anemia","type":"exact"},{"name":"distal renal tubular acidosis 4 with hemolytic anaemia","type":"exact"},{"name":"distal renal tubular acidosis 4 with hemolytic anemia","type":"exact"},{"name":"distal renal tubular acidosis with anaemia","type":"exact"},{"name":"distal renal tubular acidosis with anemia","type":"exact"},{"name":"renal tubular acidosis, distal, with hemolytic anaemia","type":"related"},{"name":"renal tubular acidosis, distal, with hemolytic anemia","type":"related"},{"name":"renal tubular acidosis, distal, with normal Red cell morphology","type":"related"}],"termid":"MONDO:0012700","terms_by_termid":{"MONDO:0012700":null},"xrefs":{"Monarch":{"xref_id":"0012700"}}}


id: PBO:0074101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 4","termid":"PBO:0074101"}


id: GO:0005057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer, converting the signal into a form where it can ultimately trigger a change in the state or activity of a cell.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer activity, downstream of receptor (obsolete GO:0005057)","synonyms":[{"name":"intracellular signal transducer activity","type":"exact"},{"name":"receptor signaling protein activity","type":"exact"},{"name":"receptor signalling protein activity","type":"exact"}],"termid":"GO:0005057"}


id: MONDO:0018108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cytomegalovirus infection","termid":"MONDO:0005132"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic disseminated cytomegalovirus infection","secondary_identifiers":["MEDGEN:1826159","Orphanet:35062","UMLS:C5680152","GARD:18811"],"synonyms":[{"name":"idiopathic disseminated CMV infection","type":"exact"}],"termid":"MONDO:0018108","xrefs":{"Monarch":{"xref_id":"0018108"}}}


id: PBO:0052309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0408","termid":"PBO:0052309"}


id: PBO:0082179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; shares functional similarity with Gcs1p","termid":"PBO:0082179"}


id: PBO:0059074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3","termid":"PBO:0059074"}


id: PBO:0003604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sed5 (predicted)","termid":"PBO:0003604"}


id: GO:0043135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-alpha-D-ribose 1-diphosphate + H2O = ribose 1,5 bisphosphate + phosphate + H+.","definition_xrefs":["PMID:12370170","MetaCyc:RXN-10969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-phosphoribosyl 1-pyrophosphate pyrophosphatase activity","synonyms":[{"name":"PRPP pyrophosphatase activity","type":"exact"}],"termid":"GO:0043135"}


id: MONDO:0008461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splenomegaly syndrome with splenic Germinal center hypoplasia and reduced circulating T helper cells","secondary_identifiers":["OMIM:183350","UMLS:C1866744","MEDGEN:357126","MESH:C566666"],"synonyms":[{"name":"splenomegaly syndrome with splenic Germinal center hypoplasia and reduced circulating T helper cells","type":"exact"}],"termid":"MONDO:0008461","xrefs":{"Monarch":{"xref_id":"0008461"}}}


id: MONDO:0020510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic syringomyelia is a rare, non-syndromic central nervous system malformation characterized by a longitudinally oriented fluid-filled cavity inside the spinal cord parenchyma or the central canal, without any readily identifiably cause. It is usually associated with pain, sensory and/or musculoskeletal disturbances, but it can also be an incidental and asymptomatic finding.","definition_xrefs":["Orphanet:99858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary syringomyelia","termid":"MONDO:0020508"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic syringomyelia","secondary_identifiers":["GARD:19693","SCTID:725001004","UMLS:C4511700","MEDGEN:1378771","icd11.foundation:1218010255"],"termid":"MONDO:0020510","xrefs":{"Monarch":{"xref_id":"0020510"}}}


id: GO:0046001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of preblastoderm mitotic cell cycle","termid":"GO:0007347"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle, embryonic","termid":"GO:0045976"},{"relation_name":"negatively_regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"down regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"negative regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046001"}


id: GO:0070210
data:
  {"annotated_genes":["SJAG_02981","SJAG_02439","SJAG_04389","SJAG_04396","SJAG_03867","SJAG_03441","SJAG_02846","SJAG_01926","SJAG_00441","SJAG_03255","SJAG_04576","SJAG_03627","SJAG_03230","SJAG_00581","SJAG_00868","SJAG_01230","SJAG_04758"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75126,78105,88315,92397,92433,93839,94641,96412,101958,103026,103888,104188,105905,108615,109616,113276,113365],"is_not":false,"summary":null,"term":"GO:0070210"}]},"cv_name":"cellular_component","definition":"A protein complex that contains a histone deacetylase and is part of the chromatin remodeling machinery. In Saccharomyces cerevisiae this complex contains the Rpd3p, Sin3p, Ume1p, Pho23p, Sap30p, Sds3p, Cti6p, Rxt2p, Rxt3p, Dep1p, Ume6p, Ash1p, Dot6p, Snt1, Sif2p, Set3p, Hos2p, Tos4p and Tod6p proteins.","definition_xrefs":["GOC:rb","PMID:19040720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01230":null,"SJAG_01926":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03627":null,"SJAG_03867":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005654","GO:0005694","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Rpd3L-Expanded complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Clr6-LE complex","type":"exact"}],"termid":"GO:0070210","terms_by_termid":{"GO:0070210":null}}


id: PBO:0059200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X7, pseudogene","termid":"PBO:0059200"}


id: GO:0102691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + N-benzyladenine = H+ + benzyladenine-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:benzyladenine 7-N-glucosyltransferase activity (obsolete GO:0102691)","termid":"GO:0102691"}


id: PBO:0086111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for biogenesis of the large ribosomal subunit; required for biogenesis of the large ribosomal subunit; interacts with proteins involved in RNA processing, ribosome biogenesis, ubiquitination and demethylation; similar to WDR55, a human WD repeat protein; essential gene","termid":"PBO:0086111"}


id: GO:1905680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of innate immunity memory response","termid":"GO:1905680"}


id: PBO:0072492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 21","termid":"PBO:0072492"}


id: PBO:0076798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor, mitochondrial","termid":"PBO:0076798"}


id: MONDO:0005782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete HELLP syndrome (obsolete MONDO:0005782)","termid":"MONDO:0005782","xrefs":{"Monarch":{"xref_id":"0005782"}}}


id: MONDO:0019316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maculopapular cutaneous mastocytosis (MCM) is a form of cutaneous mastocytosis (CM) characterized by the presence of multiple hyperpigmented macules, papules or nodules associated with abnormal accumulation of mast cells in the skin.","definition_xrefs":["Orphanet:79457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mastocytosis","termid":"MONDO:0019023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"maculopapular cutaneous mastocytosis","secondary_identifiers":["EFO:1001229","UMLS:C0042111","NCIT:C3433","ICD9:708.8","MedDRA:10046752","ICDO:9740/1","GARD:16723","icd11.foundation:245322245","MEDGEN:22588","DOID:12309","SCTID:78745000"],"synonyms":[{"name":"Paucicellular mastocytosis","type":"related"},{"name":"UP/MPCM","type":"exact"},{"name":"telangiectasia macularis eruptive perstans","type":"related"},{"name":"telangiectatic cutaneous mastocytosis","type":"related"},{"name":"urticaria pigmentosa","type":"exact"},{"name":"urticaria pigmentosa/maculopapular cutaneous mastocytosis","type":"exact"}],"termid":"MONDO:0019316","xrefs":{"Monarch":{"xref_id":"0019316"}}}


