# terms

id: GO:0032309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of icosanoids, any of a group of C20 polyunsaturated fatty acids from a cell or a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"icosanoid secretion","synonyms":[{"name":"eicosanoid secretion","type":"exact"}],"termid":"GO:0032309"}


id: MONDO:0018939
data:
  {"annotated_genes":["SJAG_04053","SJAG_01491","SJAG_04316","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85079,85080,85078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[85166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[85886,85885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"}]},"cv_name":"mondo","definition":"A rare, congenital muscular dystrophy due to dystroglycanopathy characterized by early onset muscular dystrophy, severe muscular hypotonia, severe mental retardation and typical brain and eye malformations, including pachygyria, polymicrogyria, agyria, brainstem and cerebellar structural anomalies, severe myopia, glaucoma, optic nerve and retinal hypoplasia. Patients may present with seizures, macrocephaly or microcephaly, microphthalmia, and congenital contractures. Depending on the severity, limited motor function is acquired. Less severe cases have been reported.","definition_xrefs":["Orphanet:588"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of protein O-mannosyltransferase 2","termid":"MONDO:0016185"},{"relation_name":"excluded_subClassOf","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"},{"relation_name":"excluded_subClassOf","term_name":"cobblestone lissencephaly","termid":"MONDO:0018869"},{"relation_name":"excluded_subClassOf","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"},{"relation_name":"excluded_subClassOf","term_name":"myopathy caused by variation in POMGNT1","termid":"MONDO:0700068"},{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscle-eye-brain disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:105341","GARD:156","UMLS:C0457133","ICD9:742.4","SCTID:277950001"],"synonyms":[{"name":"MEB","type":"related"},{"name":"MEB syndrome","type":"exact"},{"name":"Santavuori congenital muscular dystrophy","type":"exact"},{"name":"muscle eye brain disease","type":"related"},{"name":"muscle-eye-brain syndrome","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy congenital with brain and eye anomalies A3","type":"narrow"}],"termid":"MONDO:0018939","terms_by_termid":{"MONDO:0009364":null,"MONDO:0013154":null,"MONDO:0014140":null},"xrefs":{"Monarch":{"xref_id":"0018939"}}}


id: FYPO:0002828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the basal activity of a protein kinase is increased relative to normal. Basal protein kinase activity is the activity observed in the absence of a regulator. Abnormally elevated basal activity may or may not reach the levels observed in the normal activated state.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive catalytic activity","termid":"FYPO:0000683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0005447","FYPO:0001985","FYPO:0000652","FYPO:0001320"],"is_obsolete":false,"name":"constitutive protein kinase activity","synonyms":[{"name":"constitutive protein kinase activity during mitotic cell cycle","type":"related"},{"name":"constitutive protein kinase activity during vegetative growth","type":"exact"},{"name":"constitutively active protein kinase","type":"related"}],"termid":"FYPO:0002828"}


id: GO:1900195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oocyte maturation.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oocyte maturation","termid":"GO:1900193"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"oocyte maturation","termid":"GO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oocyte maturation","synonyms":[{"name":"activation of oocyte maturation","type":"narrow"},{"name":"up regulation of oocyte maturation","type":"exact"},{"name":"up-regulation of oocyte maturation","type":"exact"},{"name":"upregulation of oocyte maturation","type":"exact"}],"termid":"GO:1900195"}


id: GO:0052240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052240)","synonyms":[{"name":"positive chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"positive chemotaxis within other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052240"}


id: PR:O14113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sde2 gene.","definition_xrefs":["UniProtKB:O14113","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere maintenance protein SDE2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.18c","synonyms":[{"name":"Spom972h-sde2","type":"exact"},{"name":"silencing defective protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14113"}


id: MONDO:0012754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nanophthalmia","termid":"MONDO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nanophthalmos 3","secondary_identifiers":["UMLS:C2678467","GARD:18627","OMIM:611897","MEDGEN:395628","MESH:C567498"],"synonyms":[{"name":"NNO3","type":"exact"},{"name":"Nanophthalmia 3","type":"related"},{"name":"nanophthalmos 3","type":"exact"}],"termid":"MONDO:0012754","xrefs":{"Monarch":{"xref_id":"0012754"}}}


id: PBO:0018250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain ribosome biogenesis protein Rpf2","termid":"PBO:0018250"}


id: PBO:0061166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Leu (TAA) 4-1","termid":"PBO:0061166"}


id: MONDO:0005510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Collection of urine in the renal pelvis that results in dilatation of the renal pelvis and calyces. It is caused by obstruction of urine flow, nephrolithiasis, or vesicoureteral reflux. Signs and symptoms include flank pain, nausea, vomiting, fever, and dysuria.","definition_xrefs":["EFO:0005562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract obstruction","termid":"MONDO:0003330"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hydronephrosis","secondary_identifiers":["MEDGEN:42531","MESH:D006869","NCIT:C26796","DOID:11111","UMLS:C0020295","ICD9:591","SCTID:43064006"],"termid":"MONDO:0005510","xrefs":{"Monarch":{"xref_id":"0005510"}}}


id: PBO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster assembly scaffold protein Isu1","termid":"PBO:0000421"}


id: PBO:0034090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_paralogy_relationship_with","termid":"PBO:0034090"}


id: GO:0047051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + 2 [Fe(III)cytochrome c553] = 2 [Fe(II)cytochrome c553] + 2 H+ + pyruvate.","definition_xrefs":["RHEA:16465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-lactate dehydrogenase (cytochrome c-553) activity","secondary_identifiers":["EC:1.1.2.5","MetaCyc:1.1.2.5-RXN"],"synonyms":[{"name":"(R)-lactate:ferricytochrome-c-553 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047051"}


id: MONDO:1012102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic hepatic fibrosis, non-human animal","termid":"MONDO:1011775"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hepatic fibrosis, dog","secondary_identifiers":["OMIA:000454-9615"],"termid":"MONDO:1012102","xrefs":{"Monarch":{"xref_id":"1012102"}}}


id: PBO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 3","termid":"PBO:0045146"}


id: PBO:0028628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0028628"}


id: PBO:0041852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 2","termid":"PBO:0041852"}


id: GO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell, caused by a virus stopping, preventing, or reducing peptidoglycan biosynthesis in the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["GOC:bf","GOC:bm","PMID:28894177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral release from host cell by cytolysis","termid":"GO:0044659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release via suppression of host peptidoglycan biosynthetic process","synonyms":[{"name":"cytolysis by virus via suppression of host peptidoglycan biosynthetic process","type":"related"},{"name":"viral exit by cytolysis via suppression of host peptidoglycan biosynthetic process","type":"exact"},{"name":"viral release by cytolysis via suppression of host peptidoglycan biosynthetic process","type":"exact"}],"termid":"GO:0039640"}


id: GO:0075038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium maturation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium maturation (obsolete GO:0075038)","synonyms":[{"name":"negative regulation of appressorium maturation on or near host","type":"related"},{"name":"negative regulation of maturation of appressorium on or near host","type":"exact"}],"termid":"GO:0075038"}


id: PBO:0068284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit B","termid":"PBO:0068284"}


id: MONDO:0000669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to recognize a color, while being able to perceive or distinguish it.","definition_xrefs":["DOID:0060139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual agnosia","termid":"MONDO:0000685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color agnosia","termid":"MONDO:0000669","xrefs":{"Monarch":{"xref_id":"0000669"}}}


id: GO:0070826
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic protein complex that contains integrin, mobilferrin and a flavin monooxygenase, is capable of reducing Fe(III) to Fe(II) utilizing NADPH, and is involved in iron transport. Fe(II) is required in the cell as the substrate for ferrochelatase in the synthesis of heme.","definition_xrefs":["GOC:rph","PMID:11842004","GOC:mah","PMID:8639593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"paraferritin complex","termid":"GO:0070826"}


id: GO:0043558
data:
  {"annotated_genes":["SJAG_00786","SJAG_01942","SJAG_00169","SJAG_03869","SJAG_02592","SJAG_02072","SJAG_04383","SJAG_00690","SJAG_04873"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93566,91715,92011,114749,108826,98528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[102505,103139,94418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of translation initiation in response to stress","type":"exact"}],"termid":"GO:0043558","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: GO:0001565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a phorbol ester and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["PMID:10506570","GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"phorbol ester receptor activity","termid":"GO:0001565"}


id: PBO:0045290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 41","termid":"PBO:0045290"}


id: MONDO:0009558
data:
  {"annotated_genes":["SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84907],"is_not":false,"summary":null,"term":"MONDO:0009558"}]},"cv_name":"mondo","definition":"Any Treacher-Collins syndrome in which the cause of the disease is a mutation in the POLR1C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Treacher-Collins syndrome","termid":"MONDO:0002457"},{"relation_name":"is_a","term_name":"POLR1C-related disorder","termid":"MONDO:0700278"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Treacher Collins syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080791","MEDGEN:340868","UMLS:C1855433","OMIM:248390","GARD:9125","MESH:C535707"],"synonyms":[{"name":"POLR1C Treacher-Collins syndrome","type":"exact"},{"name":"TCS3","type":"related"},{"name":"TREACHER COLLINS syndrome 3","type":"related"},{"name":"Treacher Collins syndrome 3","type":"exact"},{"name":"Treacher Collins syndrome type 3","type":"exact"},{"name":"Treacher-Collins syndrome caused by mutation in POLR1C","type":"exact"},{"name":"mandibulofacial dysostosis, Treacher Collins type, autosomal recessive","type":"related"}],"termid":"MONDO:0009558","terms_by_termid":{"MONDO:0009558":null},"xrefs":{"Monarch":{"xref_id":"0009558"}}}


id: MOD:01682
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-cysteine residue with one methyl group.","definition_xrefs":["Unimod:34#C","OMSSA:73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated cysteine","termid":"MOD:00660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00905","MOD:00427"],"is_obsolete":false,"name":"monomethylated L-cysteine","synonyms":[{"name":"Me1Cys","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"methylc","type":"exact"}],"termid":"MOD:01682"}


id: MONDO:0035249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare coronary artery congenital malformation characterized by an anomalous origin and course of the left coronary artery, which originates from the right aortic sinus of Valsalva and has an abnormal proximal course, which may be intramural, prepulmonic, subpulmonic, retroaortic, retrocardiac or wrapped around the apex. Patients are frequently asymptomatic, although chest pain, dyspnea, palpitations, dizziness, syncope, and sudden cardiac arrest/death (typically following intense physical exertion) may be observed. This malformation is associated with a high risk of sudden cardiac death so surgical revascularization is recommended even in cases with no associated evidence of myocardial ischemia. [Orphanet:541443]","definition_xrefs":["Orphanet:541443"],"gene_count":0,"genotype_count":0,"name":"obsolete anomalous aortic origin of the left coronary artery (obsolete MONDO:0035249)","secondary_identifiers":["ICD10CM:Q24.5"],"termid":"MONDO:0035249","xrefs":{"Monarch":{"xref_id":"0035249"}}}


id: PBO:0054528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1928","termid":"PBO:0054528"}


id: GO:0090256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"},{"relation_name":"regulates","term_name":"cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090256"}


id: GO:0016811
data:
  {"annotated_genes":["SJAG_01987","SJAG_01416","SJAG_00964","SJAG_04467","SJAG_02618","SJAG_03844","SJAG_00450","SJAG_00476","SJAG_00581","SJAG_01231","SJAG_05287","SJAG_02276","SJAG_03227","SJAG_04939","SJAG_00691","SJAG_03775","SJAG_03013","SJAG_00811","SJAG_00392","SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87740,99529,110593],"is_not":false,"summary":null,"term":"GO:0016811"},{"annotations":[113825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043530"},{"annotations":[90971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004099"},{"annotations":[92620,92020,116432,110224,109558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004359"},{"annotations":[108621,111253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[108622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[100791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000225"},{"annotations":[108771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008936"},{"annotations":[94150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050152"},{"annotations":[103905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000224"},{"annotations":[66909,106119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008418"},{"annotations":[77740,106120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070773"},{"annotations":[90656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009039"},{"annotations":[90976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004848"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.","definition_xrefs":["EC:3.5.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00450":null,"SJAG_00476":null,"SJAG_00581":null,"SJAG_00691":null,"SJAG_00811":null,"SJAG_00964":null,"SJAG_01231":null,"SJAG_01416":null,"SJAG_01987":null,"SJAG_02276":null,"SJAG_02618":null,"SJAG_02766":null,"SJAG_03013":null,"SJAG_03227":null,"SJAG_03775":null,"SJAG_03844":null,"SJAG_04467":null,"SJAG_04939":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9673054","Reactome:R-HSA-9673053"],"termid":"GO:0016811","terms_by_termid":{"GO:0000224":null,"GO:0000225":null,"GO:0004099":null,"GO:0004359":null,"GO:0004848":null,"GO:0008418":null,"GO:0008936":null,"GO:0009039":null,"GO:0016811":null,"GO:0031078":null,"GO:0032129":null,"GO:0043530":null,"GO:0050152":null,"GO:0070773":null}}


id: GO:0086064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels and contributes to the process of cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling","termid":"GO:0010644"},{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}


id: MONDO:1012217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyarthritis, non-human animal","termid":"MONDO:1011952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarthritis, dog","secondary_identifiers":["OMIA:000805-9615"],"termid":"MONDO:1012217","xrefs":{"Monarch":{"xref_id":"1012217"}}}


id: MONDO:0016978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thymic neuroendocrine carcinoma","termid":"MONDO:0020516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"poorly differentiated thymic neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:931135","GARD:20897","Orphanet:263339","UMLS:C4305466","SCTID:717921000"],"termid":"MONDO:0016978","xrefs":{"Monarch":{"xref_id":"0016978"}}}


id: GO:0034842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: thiophene-2-carboxylate + ATP + CoASH = thiophene-2-carboxyl-CoA + AMP + PPi.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thiophene-2-carboxylate-CoA ligase activity (obsolete GO:0034842)","termid":"GO:0034842"}


id: PBO:0088923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ubiquitin-protein ligase E3, MARCH family","termid":"PBO:0088923"}


id: PBO:0055380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2810","termid":"PBO:0055380"}


id: MONDO:0014471
data:
  {"annotated_genes":["SJAG_01503","SJAG_02564","SJAG_07003","SJAG_00133"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020727"},{"annotations":[86095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032869"},{"annotations":[84336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014091"},{"annotations":[84722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011421"},{"annotations":[85776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957254"},{"annotations":[85775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957255"}]},"cv_name":"mondo","definition":"A rare, genetic, mitochondrial oxidative phosphorylation disorder that may present with a wide range of symptoms (including muscular hypotonia, hypertrophic cardiomyopathy, psychomotor delay, encephalopathy, peripheral neuropathy, lactic acidosis, 3-methylglutaconic aciduria) and clinical syndromes (including NARP and MILS).","definition_xrefs":["Orphanet:254913"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete isolated oxidative phosphorylation complex disorder (obsolete MONDO:0016805)","termid":"MONDO:0016805"},{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_01503":null,"SJAG_02564":null,"SJAG_07003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4757950","icd11.foundation:902255625","GARD:18649","DOID:0111143","MEDGEN:1655626","OMIMPS:604273"],"synonyms":[{"name":"isolated ATP synthase deficiency","type":"narrow"},{"name":"isolated mitochondrial respiratory chain complex V deficiency","type":"narrow"},{"name":"mitochondrial complex V (ATP synthase) deficiency","type":"exact"}],"termid":"MONDO:0014471","terms_by_termid":{"MONDO:0011421":null,"MONDO:0014091":null,"MONDO:0020727":null,"MONDO:0032869":null,"MONDO:0957254":null,"MONDO:0957255":null},"xrefs":{"Monarch":{"xref_id":"0014471"}}}


id: MONDO:0008171
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85722,85721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020722"}]},"cv_name":"mondo","definition":"The presence of a calculus in the pelvis of the kidney; this is most often composed of mineral salts and proteins.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"urolithiasis","termid":"MONDO:0024647"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrolithiasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D053040","NCIT:C114667","DOID:585","ICD9:592","UMLS:C0392525","SCTID:266556005","EFO:0004253","MEDGEN:98227"],"synonyms":[{"name":"CAON","type":"related"},{"name":"Stone - kidney/ureter","type":"exact"},{"name":"calculus of kidney and ureter","type":"exact"},{"name":"kidney stone","type":"exact"},{"name":"kidney stones","type":"exact"},{"name":"nephrolithiasis, calcium oxalate","type":"related"},{"name":"renal calculi","type":"exact"},{"name":"urolithiasis, calcium oxalate","type":"related"}],"termid":"MONDO:0008171","terms_by_termid":{"MONDO:0020722":null},"xrefs":{"Monarch":{"xref_id":"0008171"}}}


id: PBO:0091920
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human nuclear UNG","termid":"PBO:0091920"}


id: GO:0021813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction between two cells that modulates the association of a neuronal cell and a glial cell involved in glial-mediated radial cell migration in the cerebral cortex.","definition_xrefs":["PMID:12626695","GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"neuronal-glial interaction involved in cerebral cortex radial glia guided migration","termid":"GO:0021812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"part_of","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021813"}


id: PBO:0083687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase I, a phosphopyruvate hydratase; catalyzes conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression repressed in response to glucose; protein abundance increases in response to DNA replication stress; N-terminally propionylated in vivo; ENO1 has a paralog, ENO2, that arose from the whole genome duplication","termid":"PBO:0083687"}


id: GO:0045278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A part of the respiratory chain located in the plasma membrane, containing the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2). Examples of this component are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex IV (obsolete GO:0045278)","synonyms":[{"name":"cytochrome c oxidase complex","type":"broad"},{"name":"respiratory chain complex IV","type":"broad"}],"termid":"GO:0045278"}


id: PBO:0031059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_long_cells_(obsolete_FYPO:0000318)","termid":"PBO:0031059"}


id: MONDO:0016500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute sensory ataxic neuropathy is a rare variant of Guillain-Barré syndrome characterized by acute onset monophasic sensory neuropathy with diminished or absent tendon reflexes, loss of proprioception, positive Romberg sign and nerve conduction features of demyelination. It presents several weeks after acute infection with paresthesias, ataxia and neuropathic pain.","definition_xrefs":["Orphanet:231466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute sensory ataxic neuropathy","secondary_identifiers":["GARD:20618","SCTID:766049000","UMLS:C4707661","icd11.foundation:1951716831","MEDGEN:1641312"],"synonyms":[{"name":"ASAN","type":"exact"},{"name":"acute sensory ataxic GBS","type":"exact"},{"name":"acute sensory ataxic Guillain-Barre syndrome","type":"exact"},{"name":"acute sensory ataxic Guillain-Barré syndrome","type":"exact"}],"termid":"MONDO:0016500","xrefs":{"Monarch":{"xref_id":"0016500"}}}


id: MONDO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thrombotic thrombocytopenic purpura (obsolete MONDO:0001111)","termid":"MONDO:0001111","xrefs":{"Monarch":{"xref_id":"0001111"}}}


id: PBO:0013118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Spf38","termid":"PBO:0013118"}


id: MONDO:0000511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gallbladder adenoma (obsolete MONDO:0000511)","termid":"MONDO:0000511","xrefs":{"Monarch":{"xref_id":"0000511"}}}


id: PBO:0042022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 80","termid":"PBO:0042022"}


id: PBO:0003165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit Pka1","termid":"PBO:0003165"}


id: MONDO:0030730
data:
  {"annotated_genes":["SJAG_00303","SJAG_00336","SJAG_03542"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86340,86341,86342],"is_not":false,"summary":null,"term":"MONDO:0030730"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tessadori-Van-Haaften neurodevelopmental syndrome","termid":"MONDO:0031400"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00303":null,"SJAG_00336":null,"SJAG_03542":null},"genotype_count":0,"is_obsolete":false,"name":"Tessadori-van Haaften neurodevelopmental syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619759","MEDGEN:1803228","UMLS:C5676923"],"synonyms":[{"name":"TEVANED2","type":"exact"},{"name":"Tessadori-van Haaften neurodevelopmental syndrome 2","type":"exact"}],"termid":"MONDO:0030730","terms_by_termid":{"MONDO:0030730":null},"xrefs":{"Monarch":{"xref_id":"0030730"}}}


id: MONDO:0030957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 103","secondary_identifiers":["MEDGEN:1809962","DOID:0070389","OMIM:619913","UMLS:C5677002"],"synonyms":[{"name":"DEE103","type":"exact"},{"name":"developmental and epileptic encephalopathy 103","type":"exact"}],"termid":"MONDO:0030957","xrefs":{"Monarch":{"xref_id":"0030957"}}}


id: MONDO:0100039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A monogenic disease that has material basis in mutation in the CDKL5 gene.","definition_xrefs":["PMID:27080038","PMID:27528505","PMID:21154482","PMID:22872100"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"obsolete motor stereotypies (obsolete MONDO:0017656)","termid":"MONDO:0017656"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKL5 disorder","secondary_identifiers":["NORD:904"],"synonyms":[{"name":"CDKL5","type":"related"},{"name":"CDKL5 Deficiency Disorder","type":"exact"},{"name":"CDKL5 disorder","type":"exact"},{"name":"CDKL5 inherited genetic disease","type":"exact"},{"name":"CDKL5-related disorder","type":"related"},{"name":"inherited genetic disease caused by mutation in CDKL5","type":"exact"}],"termid":"MONDO:0100039","xrefs":{"Monarch":{"xref_id":"0100039"}}}


id: FYECO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amorolfine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ amorolfine","synonyms":[{"name":"+ amorolfine","type":"exact"}],"termid":"FYECO:0000424"}


id: GO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"thyroid hormone receptor signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid hormone receptor signaling pathway","synonyms":[{"name":"regulation of thyroid hormone mediated signaling pathway","type":"exact"},{"name":"regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002155"}


id: PBO:0057251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 451b","termid":"PBO:0057251"}


id: PBO:0060732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFAF2 pseudogene 1","termid":"PBO:0060732"}


id: GO:1903480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903480)","synonyms":[{"name":"regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903480"}


id: PBO:0040385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit A","termid":"PBO:0040385"}


id: GO:1990234
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id: MOD:00852
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id: GO:0021714
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id: PBO:0003191
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id: PBO:0004401
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id: PBO:0057060
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id: MONDO:0000790
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id: PBO:0072356
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id: PBO:0054840
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id: MONDO:0018021
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id: PBO:0056662
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id: PBO:0088352
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id: PR:O74690
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id: PBO:0012252
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id: GO:0051671
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id: GO:0033139
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id: PBO:0001863
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id: PR:O94489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.08","synonyms":[{"name":"EF-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef3","type":"exact"}],"termid":"PR:O94489"}


id: PBO:0074711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74C-1","termid":"PBO:0074711"}


id: GO:0140869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of miRNA-mediated gene silencing activity by base-pairing with a target miRNA. An example of this activity is mediated by long non-coding RNAs (lncRNAs).","definition_xrefs":["PMID:34454184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA binding","termid":"GO:0035198"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0140678","GO:0003723","GO:0098772"],"is_obsolete":false,"name":"miRNA inhibitor activity via base-pairing","synonyms":[{"name":"base-pairing target-directed miRNA suppressor activity","type":"related"},{"name":"base-pairing target-directed microRNA suppressor activity","type":"related"},{"name":"miRNA base-pairing repressor activity","type":"narrow"},{"name":"miRNA binding involved in posttranscriptional gene silencing","type":"exact"},{"name":"miRNA inhibitor activity","type":"broad"},{"name":"miRNA sponge","type":"narrow"}],"termid":"GO:0140869"}


id: SO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a the 5'UTR with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_truncation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"5 prime UTR truncation","type":"exact"},{"name":"Jannovar:5_prime_utr_truncation","type":"exact"},{"name":"snpEff:UTR_5_DELETED","type":"exact"}],"termid":"SO:0002013"}


id: PBO:0043204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, mitochondrial 1B","termid":"PBO:0043204"}


id: PBO:0039934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF38 intronic transcript 1","termid":"PBO:0039934"}


id: MONDO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign smooth muscle neoplasm arising from the wall of the stomach. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern. Unlike gastrointestinal stromal tumors, gastric leiomyomas are by definition negative for CD34 and CD117 (C-KIT).","definition_xrefs":["NCIT:C3876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of stomach","termid":"MONDO:0021449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric leiomyoma","secondary_identifiers":["SCTID:276812001","DOID:10087","MEDGEN:116062","UMLS:C0238440"],"synonyms":[{"name":"gastric leiomyoma","type":"exact"},{"name":"leiomyoma of stomach","type":"exact"},{"name":"leiomyoma of the stomach","type":"exact"},{"name":"stomach leiomyoma","type":"exact"}],"termid":"MONDO:0000938","xrefs":{"Monarch":{"xref_id":"0000938"}}}


id: GO:0004376
data:
  {"annotated_genes":["SJAG_03056","SJAG_00747","SJAG_04770","SJAG_00295","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004378"},{"annotations":[101484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102704"},{"annotations":[115873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004377"},{"annotations":[102219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180041"},{"annotations":[86724,90430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033164"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-D-mannosyl-D-mannose linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_00747":null,"SJAG_03056":null,"SJAG_03115":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"glycolipid mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162873","GO:0004580","Reactome:R-HSA-162821"],"synonyms":[{"name":"glycolipid mannosyl transferase activity","type":"exact"}],"termid":"GO:0004376","terms_by_termid":{"GO:0004377":null,"GO:0004378":null,"GO:0033164":null,"GO:0102704":null,"GO:0180041":null}}


id: GO:0047014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NADP+ = D-glyceraldehyde 3-phosphate + H+ + NADPH.","definition_xrefs":["RHEA:19773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate 1-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R00845","MetaCyc:1.1.1.177-RXN","EC:1.1.1.177"],"synonyms":[{"name":"L-glycerol 3-phosphate:NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent glycerin-3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerin-3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerol phosphate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"sn-glycerol-3-phosphate:NADP+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047014"}


id: GO:0060776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The leaf morphogenesis process which results in the shaping of a simple leaf. A simple leaf is a leaf in which the lamina is undivided.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaf morphogenesis","termid":"GO:0009965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"simple leaf morphogenesis","termid":"GO:0060776"}


id: SO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a half KB of the end of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"500B_downstream_variant","synonyms":[{"name":"500B downstream variant","type":"exact"},{"name":"near-gene-3","type":"exact"}],"termid":"SO:0001634"}


id: GO:0097038
data:
  {"annotated_genes":["SJAG_03609","SJAG_03162","SJAG_02683","SJAG_00355","SJAG_01785","SJAG_03281","SJAG_03750","SJAG_04049","SJAG_01227","SJAG_04583","SJAG_03943","SJAG_04059","SJAG_01329","SJAG_02532","SJAG_01722","SJAG_04578","SJAG_01422","SJAG_00790","SJAG_00784","SJAG_00825","SJAG_04883"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87684,87977,92865,93440,106551,107352,109065,109603,111200,113052,113316,113533,118000],"is_not":false,"summary":null,"term":"GO:0097038"},{"annotations":[92293],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099020"},{"annotations":[97855,96995,99784,86589,105487,114736,93916],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990578"}]},"cv_name":"cellular_component","definition":"The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes.","definition_xrefs":["GOC:bf","GOC:mcc","GOC:mah","GOC:pr","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"},{"relation_name":"part_of","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_00784":null,"SJAG_00790":null,"SJAG_00825":null,"SJAG_01227":null,"SJAG_01329":null,"SJAG_01422":null,"SJAG_01722":null,"SJAG_01785":null,"SJAG_02532":null,"SJAG_02683":null,"SJAG_03162":null,"SJAG_03281":null,"SJAG_03609":null,"SJAG_03750":null,"SJAG_03943":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04578":null,"SJAG_04583":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"perinuclear endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perinuclear ER","type":"exact"}],"termid":"GO:0097038","terms_by_termid":{"GO:0097038":null,"GO:0099020":null,"GO:1990578":null}}


id: GO:0016695
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.12.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on hydrogen as donor, other acceptors","type":"narrow"}],"termid":"GO:0016695","terms_by_termid":{"GO:0008901":null}}


id: PBO:0091249
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-One, Three-Galactosyltransferase","termid":"PBO:0091249"}


id: PBO:0049790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 25","termid":"PBO:0049790"}


id: MONDO:0013262
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85398,85399],"is_not":false,"summary":null,"term":"MONDO:0013262"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the MYH7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1S","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1834481","GARD:12832","MEDGEN:371831","MESH:C563538","DOID:0110454","OMIM:613426"],"synonyms":[{"name":"CMD1S","type":"exact"},{"name":"MYH7 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1S","type":"related"},{"name":"cardiomyopathy, dilated, type 1S","type":"exact"},{"name":"dilated cardiomyopathy type 1S","type":"exact"},{"name":"dilated cardiomyopathy-1S","type":"related"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in MYH7","type":"exact"},{"name":"left ventricular noncompaction 5","type":"related"}],"termid":"MONDO:0013262","terms_by_termid":{"MONDO:0013262":null},"xrefs":{"Monarch":{"xref_id":"0013262"}}}


id: MONDO:0005536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulcerative colitis that involves the entire colon.","direct_ancestors":[{"relation_name":"is_a","term_name":"ulcerative colitis","termid":"MONDO:0005101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"pancolitis","secondary_identifiers":["MEDGEN:1720692","UMLS:C0868908","EFO:0005626","NANDO:1200450"],"synonyms":[{"name":"pan-ulcerative colitis","type":"exact"},{"name":"universal colitis","type":"exact"}],"termid":"MONDO:0005536","xrefs":{"Monarch":{"xref_id":"0005536"}}}


id: PBO:0086866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; involved in the adaptation to low concentrations of glucose independent of the SNF3 regulated pathway; SKS1 has a paralog, VHS1, that arose from the whole genome duplication","termid":"PBO:0086866"}


id: PBO:0062590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 5","termid":"PBO:0062590"}


id: MONDO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral lipidosis (obsolete MONDO:0001107)","termid":"MONDO:0001107","xrefs":{"Monarch":{"xref_id":"0001107"}}}


id: PBO:0040303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase secretory pathway Ca2+ transporting 1","termid":"PBO:0040303"}


id: PBO:0074657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 47","termid":"PBO:0074657"}


id: GO:0008658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to penicillin, an antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"penicillin binding","termid":"GO:0008658"}


id: GO:0005682
data:
  {"annotated_genes":["SJAG_04230","SJAG_00147","SJAG_04222","SJAG_05235","SJAG_01327","SJAG_02843","SJAG_01301","SJAG_00278","SJAG_03469","SJAG_02455","SJAG_03954","SJAG_02304","SJAG_00414","SJAG_04497","SJAG_01547","SJAG_02279","SJAG_03460","SJAG_03070","SJAG_01819","SJAG_05240","SJAG_02295","SJAG_01870","SJAG_02469"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94122,94375,94799,95020,96597,97207,99817,101729,101888,105038,105505,105706,107688,109217,109770,111385,112019,113491,114068,114341,115002,115540,116956],"is_not":false,"summary":null,"term":"GO:0005682"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U5, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U5 snRNP, most of which remain associated with the U5 snRNA both while the U5 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00278":null,"SJAG_00414":null,"SJAG_01301":null,"SJAG_01327":null,"SJAG_01547":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03954":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04497":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U5 snRNP","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snRNP U5","type":"exact"}],"termid":"GO:0005682","terms_by_termid":{"GO:0005682":null}}


id: PBO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDR subfamily","termid":"PBO:0001815"}


id: PBO:0036320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Pan3 (predicted)","termid":"PBO:0036320"}


id: PBO:0086759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; questionable ORF from MIPS","termid":"PBO:0086759"}


id: PBO:0079924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URB1 antisense RNA 1 (head to head)","termid":"PBO:0079924"}


id: PBO:0051578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor B","termid":"PBO:0051578"}


id: PBO:0061090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK3 homeobox 1","termid":"PBO:0061090"}


id: MONDO:0020610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, diego system (obsolete MONDO:0020610)","secondary_identifiers":["OMIM:110500"],"synonyms":[{"name":"BLOOD GROUP, DIEGO SYSTEM","type":"related"},{"name":"DI","type":"related"},{"name":"Diego Blood Group System","type":"related"},{"name":"blood group, Diego","type":"exact"}],"termid":"MONDO:0020610","xrefs":{"Monarch":{"xref_id":"0020610"}}}


id: GO:0006067
data:
  {"annotated_genes":["SJAG_03743","SJAG_05006","SJAG_03822","SJAG_01414","SJAG_00240","SJAG_03370","SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[113749,97923,97924,113748,87716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[95773],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03786":null,"SJAG_03822":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ethanol metabolism","type":"exact"}],"termid":"GO:0006067","terms_by_termid":{"GO:0006068":null,"GO:0019655":null,"GO:2001172":null}}


id: MONDO:0005459
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id: GO:0004471
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117631],"is_not":false,"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH.","definition_xrefs":["RHEA:12653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malic enzyme activity","termid":"GO:0004470"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"malate dehydrogenase (decarboxylating) (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.1.1.39-RXN","KEGG_REACTION:R00214","Reactome:R-HSA-9012268","EC:1.1.1.39","GO:0004472","GO:0016619"],"synonyms":[{"name":"'malic' enzyme","type":"related"},{"name":"(S)-malate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"(S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating)","type":"related"},{"name":"NAD-linked malic enzyme","type":"related"},{"name":"NAD-malic enzyme activity","type":"broad"},{"name":"NAD-specific malic enzyme","type":"related"},{"name":"malate dehydrogenase (decarboxylating) activity","type":"related"},{"name":"malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"GO:0004471","terms_by_termid":{"GO:0004471":null}}


id: PBO:0043703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6A1","termid":"PBO:0043703"}


id: GO:0099175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form of a postsynapse.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynapse organization","synonyms":[{"name":"regulation of postsynapse organisation","type":"exact"},{"name":"regulation of postsynapse organization and biogenesis","type":"related"},{"name":"regulation of postsynapse structure","type":"exact"}],"termid":"GO:0099175"}


id: MONDO:0010998
data:
  {"annotated_genes":["SJAG_04952"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85729],"is_not":false,"summary":null,"term":"MONDO:0010998"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by severe neurological involvement, including hypotonia, developmental delay, intellectual disability, postnatal microcephaly, and progressive brain and cerebellar atrophy. Epilepsy with hypsarrythmia is frequently reported. Additional features that may be observed include failure to thrive, arthrogryposis multiplex congenita (AMC), vision impairment (optic atrophy, iris coloboma) and facial dysmorphism (hypertelorism with a broad nasal bridge, large and thick ears, thin lips, micrognathia). The disease is caused by loss of function mutations of the gene ALG3 (3q27.3).","definition_xrefs":["Orphanet:79321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"ALG3-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:601110","DOID:0080556","MEDGEN:322026","SCTID:720976009","NCIT:C126870","MESH:C535742","GARD:9827","UMLS:C1832736"],"synonyms":[{"name":"ALG3-CDG","type":"exact"},{"name":"ALG3-CDG (CDG-Id)","type":"related"},{"name":"ALG3-congenital disorder of glycosylation","type":"exact"},{"name":"CDG 1D","type":"related"},{"name":"CDG Id","type":"related"},{"name":"CDG syndrome type Id","type":"exact"},{"name":"CDG-Id","type":"exact"},{"name":"CDG1D","type":"exact"},{"name":"CDGId","type":"exact"},{"name":"CDGS, type IV","type":"related"},{"name":"CDGS, type IV, formerly","type":"related"},{"name":"CDGS4 (formerly)","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Id","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type IV (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type IV","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type IV, formerly","type":"related"},{"name":"congenital disorder of glycosylation type 1d","type":"exact"},{"name":"congenital disorder of glycosylation type Id","type":"exact"},{"name":"congenital disorder of glycosylation, type Id","type":"related"},{"name":"mannosyltransferase 6 deficiency","type":"exact"}],"termid":"MONDO:0010998","terms_by_termid":{"MONDO:0010998":null},"xrefs":{"Monarch":{"xref_id":"0010998"}}}


id: MONDO:0100400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(3;12)(q23;p12.3). (A cytogenetic abnormality that refers to the translocation of the long arm (q23) of chromosome 3 and the short arm (p12.3) of chromosome 12. It is associated with ETV6/MECOM (EVI1) fusions, myeloproliferative disorders, myelodysplastic syndromes and acute myelogenous leukemia.)","definition_xrefs":["NCIT:C168766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(3;12)(q23;p12.3)","synonyms":[{"name":"AML, t(3;12)(q23;p12.3)","type":"exact"}],"termid":"MONDO:0100400","xrefs":{"Monarch":{"xref_id":"0100400"}}}


id: GO:1900882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 17-methylnonadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900882"}


id: GO:2001304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin B4. Lipoxin B4 is a C20 hydroxy fatty acid having (5S)-, (14R)- and (15S)-hydroxy groups as well as (6E)- (8Z)-, (10E)- and (12E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lipoxin B4 metabolic process","synonyms":[{"name":"LXB4 metabolic process","type":"exact"},{"name":"LXB4 metabolism","type":"exact"},{"name":"lipoxin B4 metabolism","type":"exact"}],"termid":"GO:2001304"}


id: PBO:0044982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExH-box helicase 34","termid":"PBO:0044982"}


id: GO:0106153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone in which a residue has been modified by phosphorylation.","definition_xrefs":["GOC:mah","PMID:20679485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone binding","termid":"GO:0042393"},{"relation_name":"is_a","term_name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"phosphorylated histone binding","termid":"GO:0106153"}


id: GO:0017150
data:
  {"annotated_genes":["SJAG_01041","SJAG_03240","SJAG_03236","SJAG_00174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102262"},{"annotations":[108789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102263"},{"annotations":[103863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102264"},{"annotations":[117545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102266"},{"annotations":[117546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102267"},{"annotations":[88668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouridine in tRNA + NAD(P)+ = a uridine in tRNA + H+ + NAD(P)H.","definition_xrefs":["PMID:22123979","PMID:11983710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dihydrouridine synthase activity","termid":"GO:0106413"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_01041":null,"SJAG_03236":null,"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140098","GO:0140101","GO:0016491"],"is_obsolete":false,"name":"tRNA dihydrouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6782296"],"termid":"GO:0017150","terms_by_termid":{"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null}}


id: MONDO:0004807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Loeffler syndrome (obsolete MONDO:0004807)","termid":"MONDO:0004807","xrefs":{"Monarch":{"xref_id":"0004807"}}}


id: SO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A consensus AFLP fragment is an AFLP sequence produced from any alignment algorithm which uses assembled multiple AFLP sequences as input.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"consensus_region","termid":"SO:0000994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus_AFLP_fragment","synonyms":[{"name":"consensus AFLP fragment","type":"exact"},{"name":"consensus amplified fragment length polymorphism fragment","type":"exact"}],"termid":"SO:0001991"}


id: MONDO:0006339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, unilateral tumor that arises from the ovary and is characterized by the presence of conspicuous microcystic changes, cellular areas, and a fibrous stroma.","definition_xrefs":["NCIT:C121953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign ovarian sex cord-stromal tumor","termid":"MONDO:0024387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian microcystic stromal tumor","secondary_identifiers":["UMLS:C4054287","GARD:22304","EFO:1000424","MEDGEN:889995","Orphanet:569248"],"synonyms":[{"name":"MCST","type":"exact"},{"name":"microcystic stromal tumor","type":"exact"},{"name":"microcystic stromal tumour","type":"exact"}],"termid":"MONDO:0006339","xrefs":{"Monarch":{"xref_id":"0006339"}}}


id: GO:0008347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a glial cell, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration","secondary_identifiers":["GO:0043359"],"synonyms":[{"name":"glia cell migration","type":"exact"}],"termid":"GO:0008347"}


id: GO:0047484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the response to osmotic stress.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to osmotic stress","termid":"GO:0047484"}


id: GO:0009685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"gibberellin metabolic process","synonyms":[{"name":"gibberellic acid metabolic process","type":"narrow"},{"name":"gibberellic acid metabolism","type":"narrow"},{"name":"gibberellin metabolism","type":"exact"}],"termid":"GO:0009685"}


id: MONDO:0014287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous or compound heterozygous mutation in the WDR34 gene on chromosome 9q34.","definition_xrefs":["PMID:24183449","DOID:0110095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"asphyxiating thoracic dystrophy 3","termid":"MONDO:0013127"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 11 with or without polydactyly","secondary_identifiers":["OMIM:615633","MEDGEN:816530","UMLS:C3810200","GARD:15996"],"synonyms":[{"name":"SRTD11","type":"exact"},{"name":"short-rib thoracic dysplasia 11 with or without polydactyly","type":"exact"}],"termid":"MONDO:0014287","xrefs":{"Monarch":{"xref_id":"0014287"}}}


id: PBO:0088349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexitol dehydrogenase","termid":"PBO:0088349"}


id: MONDO:0008448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spheroid body myopathy (obsolete MONDO:0008448)","termid":"MONDO:0008448","xrefs":{"Monarch":{"xref_id":"0008448"}}}


id: PBO:0088761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1","termid":"PBO:0088761"}


id: MONDO:0012812
data:
  {"annotated_genes":["SJAG_01697"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85419],"is_not":false,"summary":null,"term":"MONDO:0012812"}]},"cv_name":"mondo","definition":"Early infantile epileptic encephalopathy 4 (EIEE4) is a form of early infantile epileptic encephalopathy, which refers to a group of neurological conditions characterized by severe seizures beginning in infancy. EIEE4, specifically, is often associated with partial complex or tonic-clonic seizures, although other seizure types have been reported. Other signs and symptoms mayinclude intellectual disability, reduced muscle tone (hypotonia), hypsarrhythmia (an irregular pattern seen on EEG), dyskinesia (involuntary movement of the body), and spastic di- or quadriplegia. EIEE4 is caused by changes (mutations) in the STXBP1 gene and is inherited in an autosomal dominant manner. Treatment is based on the signs and symptoms present in each person. For example, certain medications are often prescribed to help control seizures, although they are not always effective in all people with the condition.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Dravet syndrome","termid":"MONDO:0100135"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567404","DOID:0080436","MEDGEN:436917","Orphanet:599373","OMIM:612164","UMLS:C2677326","GARD:12900","NCIT:C162472","SCTID:768666006"],"synonyms":[{"name":"DEE4","type":"exact"},{"name":"EIEE4","type":"exact"},{"name":"STXBP1 early infantile epileptic encephalopathy","type":"exact"},{"name":"STXBP1-related early-onset encephalopathy","type":"related"},{"name":"STXBP1-related encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 4","type":"exact"},{"name":"developmental and epileptic encephalopathy, 4","type":"exact"},{"name":"early infantile epileptic encephalopathy 4","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in STXBP1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 4","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 4","type":"exact"}],"termid":"MONDO:0012812","terms_by_termid":{"MONDO:0012812":null},"xrefs":{"Monarch":{"xref_id":"0012812"}}}


id: MONDO:0021516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the glottis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glottis neoplasm","termid":"MONDO:0002353"},{"relation_name":"is_a","term_name":"benign laryngeal neoplasm","termid":"MONDO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of glottis","secondary_identifiers":["MEDGEN:91123","icd11.foundation:1704448187","NCIT:C4605","SCTID:92123007","UMLS:C0347234"],"synonyms":[{"name":"benign glottis neoplasm","type":"exact"},{"name":"benign glottis tumor","type":"exact"},{"name":"benign glottis tumour","type":"exact"},{"name":"benign neoplasm of the glottis","type":"exact"},{"name":"benign tumor of glottis","type":"exact"},{"name":"benign tumor of the glottis","type":"exact"},{"name":"benign tumour of glottis","type":"exact"},{"name":"benign tumour of the glottis","type":"exact"},{"name":"glottis benign neoplasm","type":"exact"}],"termid":"MONDO:0021516","xrefs":{"Monarch":{"xref_id":"0021516"}}}


id: PBO:0075556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spen family transcriptional repressor","termid":"PBO:0075556"}


id: MONDO:0100021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood-onset epilepsy that is characterized by the presence of visually-induced focal occipital lobe seizures. A proportion of patients with this syndrome have developmental delays and learning difficulty.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"photosensitive occipital lobe epilepsy","termid":"MONDO:0100021","xrefs":{"Monarch":{"xref_id":"0100021"}}}


id: PBO:0057638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1228","termid":"PBO:0057638"}


id: GO:1905773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 8-hydroxy-2'-deoxyguanosine an oxidized purine residue found in damaged DNA.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:BHF_telomere","GO_REF:0000067","GOC:nc","PMID:19734539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized purine DNA binding","termid":"GO:0032357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"8-hydroxy-2'-deoxyguanosine DNA binding","termid":"GO:1905773"}


id: PBO:0027879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_H4-K20_trimethylation","termid":"PBO:0027879"}


id: FYPO:0001687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing benomyl.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on benomyl","synonyms":[{"name":"normal cell population growth in presence of benomyl","type":"exact"},{"name":"normal cell population growth on benomyl","type":"exact"},{"name":"normal cell population growth on methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"normal cellular response to benomyl","type":"related"},{"name":"normal growth on methyl [1-(butylcarbamoyl)-1H-benzimidazol-2-yl]carbamate","type":"exact"},{"name":"normal vegetative cell population growth on benomyl","type":"exact"}],"termid":"FYPO:0001687"}


id: PR:Q9UT22
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribulose-1-phosphate dehydratase-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.06c","synonyms":[{"name":"Spom972h-SPAC9.06c","type":"exact"}],"termid":"PR:Q9UT22"}


id: GO:2000210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of anoikis","termid":"GO:2000209"},{"relation_name":"positively_regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anoikis","synonyms":[{"name":"positive regulation of detachment induced cell death","type":"exact"},{"name":"positive regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000210"}


id: PBO:0042951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 5","termid":"PBO:0042951"}


id: PBO:0053687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 880","termid":"PBO:0053687"}


id: PBO:0003102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Bms1 (predicted)","termid":"PBO:0003102"}


id: GO:0030548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is changed.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor regulator activity","termid":"GO:0099602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"acetylcholine receptor regulator activity","termid":"GO:0030548"}


id: GO:0031458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + a betaine(out) = ADP + phosphate + a betaine(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type betaine transporter activity","synonyms":[{"name":"ABC-type betaine transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent betaine transporter activity","type":"exact"},{"name":"ATPase-coupled betaine transporter activity","type":"related"},{"name":"betaine ABC transporter","type":"narrow"},{"name":"betaine-transporting ATPase activity","type":"exact"}],"termid":"GO:0031458"}


id: FYPO:0007099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the lengthening of the distance between poles of the meiotic spindle that occurs as part of the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0000257","FYPO:0000631"],"is_obsolete":false,"name":"normal spindle elongation in meiosis I","synonyms":[{"name":"normal meiotic spindle elongation in first meiotic nuclear division","type":"exact"},{"name":"normal meiotic spindle elongation in meiosis I","type":"exact"}],"termid":"FYPO:0007099"}


id: FYPO:0007242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is abolished in both of the daughter cells formed as a result of the division of a mother cell in which NETO did not occur. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PMID:31719163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO in daughter cells","termid":"FYPO:0007240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0005568"],"is_obsolete":false,"name":"abolished NETO in both daughter cells","synonyms":[{"name":"abolished NETO in both daughter cells during mitotic cell cycle","type":"related"},{"name":"abolished NETO in both daughter cells during vegetative growth","type":"exact"},{"name":"abolished activation of bipolar cell growth in both daughter cells","type":"related"},{"name":"abolished cell growth mode switching, monopolar to bipolar, in both daughter cells","type":"exact"},{"name":"abolished new end take-off in both daughter cells","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth in both daughter cells","type":"exact"}],"termid":"FYPO:0007242"}


id: PBO:0075383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 30","termid":"PBO:0075383"}


id: GO:0030096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the membrane-derived thylakoid, containing the P680 reaction center. In the light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem II","termid":"GO:0009523"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid photosystem II","synonyms":[{"name":"plasma membrane photosystem II","type":"exact"}],"termid":"GO:0030096"}


id: GO:0103105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + a standard alpha amino acid = dihomomethionine + a 2-oxo carboxylate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxo-6-methylthiohexanoate aminotransferase activity (obsolete GO:0103105)","termid":"GO:0103105"}


id: PBO:0012288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase","termid":"PBO:0012288"}


id: GO:0060837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell, a thin flattened cell that lines the inside surfaces of blood vessels.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell differentiation","termid":"GO:0045446"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}


id: PR:O74405
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SET domain-containing protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04849","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine N-methyltransferase set11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.04c","secondary_identifiers":["UniProtKB:O74405"],"synonyms":[{"name":"SET domain-containing protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SETD4","type":"exact"},{"name":"meiotically up-regulated gene 76 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74405"}


id: PBO:0058354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4727","termid":"PBO:0058354"}


id: PBO:0011167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamideformyltransferase","termid":"PBO:0011167"}


id: PATO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's lacking orientation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disoriented","termid":"PATO:0000613"}


id: PR:O14338
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ebs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C2F12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.03c","synonyms":[{"name":"Spom972h-ebs1","type":"exact"}],"termid":"PR:O14338"}


id: PR:O42943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family F member 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03209","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C16H5.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.08c","secondary_identifiers":["UniProtKB:O42943"],"synonyms":[{"name":"Spom972h-ABCF2","type":"exact"}],"termid":"PR:O42943"}


id: MONDO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The inability to generate oral-verbal expression, despite normal comprehension of speech. This may be associated with brain diseases or mental disorders. Organic mutism may be associated with damage to the frontal lobe; brain stem; thalamus; and cerebellum. Selective mutism is a psychological condition that usually affects children characterized by continuous refusal to speak in social situations by a child who is able and willing to speak to selected persons. Kussmal aphasia refers to mutism in psychosis.","definition_xrefs":["MESH:D009155","PMID:7959517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"speech disorder","termid":"MONDO:0004730"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutism","secondary_identifiers":["UMLS:C0026884","DOID:4189","HP:0002300","icd11.foundation:1275861519","MEDGEN:6476"],"synonyms":[{"name":"mutism","type":"exact"},{"name":"mutism (disease)","type":"exact"}],"termid":"MONDO:0002905","xrefs":{"Monarch":{"xref_id":"0002905"}}}


id: PR:000027598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:11242054","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.3 (Schizosaccharomyces pombe)","termid":"PR:000027596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-","type":"exact"}],"termid":"PR:000027598"}


id: MONDO:0017435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal dominant inherited syndrome caused by mutations in the IRF6 gene. It is characterized by the presence of cleft palate, cleft lip, pits in the lower lip, web behind the knee (popliteal pterygium), syndactyly, cryptorchidism, scrotal malformation, and hypoplasia of the labia majora.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"arthrogryposis syndrome","termid":"MONDO:0015225"},{"relation_name":"is_a","term_name":"IRF6-related condition","termid":"MONDO:1040010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popliteal pterygium syndrome","secondary_identifiers":["MESH:C562509","UMLS:C0265259","NCIT:C118786","MEDGEN:78543","ICD9:756.89","Orphanet:294963","SCTID:66783006","DOID:0060055","GARD:21189","icd11.foundation:543218573"],"synonyms":[{"name":"PPS","type":"exact"},{"name":"facio-genito-popliteal syndrome","type":"exact"}],"termid":"MONDO:0017435","xrefs":{"Monarch":{"xref_id":"0017435"}}}


id: GO:0032234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel.","definition_xrefs":["PMID:16582901","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium ion transport via store-operated calcium channel activity (obsolete GO:0032234)","synonyms":[{"name":"regulation of calcium ion transport via store-operated calcium channel activity","type":"exact"},{"name":"regulation of calcium transport via store-operated calcium channel","type":"exact"},{"name":"regulation of store-operated calcium channel activity","type":"exact"}],"termid":"GO:0032234"}


id: PBO:0017013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidate cytidylyltransferase Tam41 (predicted)","termid":"PBO:0017013"}


id: PBO:0045536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA2 upstream binding RNA","termid":"PBO:0045536"}


id: PBO:0042253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil serine rich protein 1","termid":"PBO:0042253"}


id: GO:0090498
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a Golgi membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","PMID:21337012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of Golgi membrane","synonyms":[{"name":"extrinsic to Golgi membrane","type":"narrow"}],"termid":"GO:0090498"}


id: PBO:0065455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 2 pseudogene 1","termid":"PBO:0065455"}


id: PATO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the abdomen of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventrally rotated","termid":"PATO:0001659"}


id: MONDO:0700140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma of mesenchymal origin in a dog. It is the most common bone cancer in dogs, most often developing in the limbs of large or giant breed dogs. The morphologic and biologic behavior of canine osteosarcomas is similar to that of human osteosarcomas.","definition_xrefs":["NCIT:C120045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine sarcoma","termid":"MONDO:0700149"},{"relation_name":"is_a","term_name":"osteosarcoma, non-human animal","termid":"MONDO:1010212"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine osteosarcoma","secondary_identifiers":["OMIA:001441-9615"],"synonyms":[{"name":"osteosarcoma, dog","type":"exact"}],"termid":"MONDO:0700140","xrefs":{"Monarch":{"xref_id":"0700140"}}}


id: MONDO:0859085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with gait disturbance, dysmorphic facies, and behavioral abnormalities, X-linked","secondary_identifiers":["MEDGEN:1823953","UMLS:C5774179","OMIM:301094"],"termid":"MONDO:0859085","xrefs":{"Monarch":{"xref_id":"0859085"}}}


id: PBO:0061722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2G","termid":"PBO:0061722"}


id: PBO:0068349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 126","termid":"PBO:0068349"}


id: PBO:0040626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 5","termid":"PBO:0040626"}


id: GO:0097372
data:
  {"annotated_genes":["SJAG_01075","SJAG_04186","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89261,103370,113554],"is_not":false,"summary":null,"term":"GO:0097372"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 18) + NAD+ + H2O = histone H3 L-lysine (position 18) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K18 to NAD, producing nicotinamide.","definition_xrefs":["PMID:22722849","GOC:sp","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0019213","GO:0003674","GO:0016740","GO:0033558","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H3K18 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H3-K18 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H3K18 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K18 specific)","type":"exact"}],"termid":"GO:0097372","terms_by_termid":{"GO:0097372":null}}


id: GO:0009034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + H2O = indole + NH4 + pyruvate.","definition_xrefs":["RHEA:19553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tryptophanase activity","secondary_identifiers":["MetaCyc:TRYPTOPHAN-RXN","EC:4.1.99.1","KEGG_REACTION:R00673"],"synonyms":[{"name":"L-tryptophan indole-lyase (deaminating) activity","type":"related"},{"name":"L-tryptophan indole-lyase (deaminating; pyruvate forming) activity","type":"related"},{"name":"L-tryptophan indole-lyase activity","type":"related"},{"name":"L-tryptophanase activity","type":"related"},{"name":"TNase activity","type":"related"},{"name":"tryptophan catabolic process, using tryptophanase","type":"related"},{"name":"tryptophan catabolism, using tryptophanase","type":"related"}],"termid":"GO:0009034"}


id: MONDO:0004699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin or Hodgkin lymphoma that arises from any part of the digestive system, with the bulk of the disease localized to that site.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0005570"],"is_obsolete":false,"name":"gastrointestinal lymphoma","secondary_identifiers":["UMLS:C0740372","ICD9:202.80","MEDGEN:148147","DOID:903","NCIT:C38162","SCTID:449072004"],"synonyms":[{"name":"digestive system lymphoma","type":"exact"},{"name":"gastrointestinal lymphoma","type":"exact"},{"name":"lymphoma of digestive system","type":"exact"},{"name":"primary digestive system lymphoma","type":"exact"},{"name":"primary gastrointestinal lymphoma","type":"exact"}],"termid":"MONDO:0004699","xrefs":{"Monarch":{"xref_id":"0004699"}}}


id: GO:0009226
data:
  {"annotated_genes":["SJAG_03818","SJAG_01784","SJAG_02954","SJAG_02648","SJAG_02951","SJAG_04728","SJAG_01443","SJAG_03188","SJAG_00890","SJAG_00519","SJAG_02950","SJAG_00978","SJAG_03723","SJAG_02783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115217,102263,107541,88410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"},{"annotations":[112843,112850,108745,112861,112851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052574"},{"annotations":[101873,87744,101967,57733,87405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00890":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_01784":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03188":null,"SJAG_03723":null,"SJAG_03818":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleotide-sugar biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-sugar anabolism","type":"exact"},{"name":"nucleotide-sugar biosynthesis","type":"exact"},{"name":"nucleotide-sugar formation","type":"exact"},{"name":"nucleotide-sugar synthesis","type":"exact"}],"termid":"GO:0009226","terms_by_termid":{"GO:0006048":null,"GO:0009298":null,"GO:0052574":null}}


id: PBO:0073382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding protein 1","termid":"PBO:0073382"}


id: MONDO:0007617
data:
  {"annotated_genes":["SJAG_02254"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85206],"is_not":false,"summary":null,"term":"MONDO:0007617"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the ARID1B gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Coffin-Siris syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:609943","OMIM:614562","MEDGEN:482831","GARD:15072","MESH:C538391","UMLS:C3281201","OMIM:135900","DOID:0070042"],"synonyms":[{"name":"ARID1B-related BAFopathy","type":"exact"},{"name":"COFFIN-SIRIS syndrome","type":"related"},{"name":"COFFIN-SIRIS syndrome 1","type":"exact"},{"name":"CSS","type":"related"},{"name":"CSS1","type":"exact"},{"name":"Coffin-Siris syndrome 1","type":"exact"},{"name":"MRD12","type":"exact"},{"name":"autosomal dominant mental retardation 12","type":"exact"},{"name":"fifth digit syndrome","type":"broad"},{"name":"hypertrichosis, hyperkeratosis, intellectual disability, and distinctive facial features","type":"exact"},{"name":"hypertrichosis, hyperkeratosis, mental retardation, and distinctive facial features","type":"exact"},{"name":"intellectual disability, autosomal dominant 12","type":"exact"},{"name":"mental retardation, autosomal dominant 12","type":"related"},{"name":"mental retardation, autosomal dominant type 12","type":"exact"}],"termid":"MONDO:0007617","terms_by_termid":{"MONDO:0007617":null},"xrefs":{"Monarch":{"xref_id":"0007617"}}}


id: MONDO:0044332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"childhood-onset benign chorea with striatal involvement","secondary_identifiers":["Orphanet:494541","UMLS:C5567463","GARD:17906","MEDGEN:1798886"],"termid":"MONDO:0044332","xrefs":{"Monarch":{"xref_id":"0044332"}}}


id: GO:0071978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Bacterial-type flagellum-dependent cell motility in which the action of numerous flagella results in the smooth movement of a group of cells along a solid surface. Swarming motility is observed in groups of bacteria.","definition_xrefs":["PMID:18461074","GOC:cilia","PMID:14527279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial-type flagellum-dependent cell motility","termid":"GO:0071973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial-type flagellum-dependent swarming motility","synonyms":[{"name":"bacterial-type flagellar swarming motility","type":"related"},{"name":"bacterial-type flagellum-mediated cell swarming","type":"exact"}],"termid":"GO:0071978"}


id: GO:0004214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal dipeptide, Xaa-Xbb from Xaa-Xbb-Xcc, except when Xaa is Arg or Lys, or Xbb or Xcc is Pro.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase I activity (obsolete GO:0004214)","synonyms":[{"name":"dipeptidyl-peptidase I activity","type":"exact"}],"termid":"GO:0004214"}


id: MONDO:0012073
data:
  {"annotated_genes":["SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85874],"is_not":false,"summary":null,"term":"MONDO:0012073"}]},"cv_name":"mondo","definition":"Ribose-5-P isomerase deficiency is an extremely rare, hereditary, disorder of pentose phosphate metabolism characterized by progressive leukoencephalopathy and a highly increased ribitol and D-arabitol levels in the brain and body fluids. Clinical presentation includes psychomotor delay, epilepsy, and childhood-onset slow neurological regression with ataxia, spasticity, optic atrophy and sensorimotor neuropathy.","definition_xrefs":["Orphanet:440706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"inborn disorder of pentose phosphate metabolism","termid":"MONDO:0019231"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"ribose-5-P isomerase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17747","MESH:C563212","OMIM:608611","ICD9:277.6","SCTID:124667004","MEDGEN:220946","UMLS:C1291609"],"synonyms":[{"name":"ribose 5-phosphate isomerase deficiency","type":"related"}],"termid":"MONDO:0012073","terms_by_termid":{"MONDO:0012073":null},"xrefs":{"Monarch":{"xref_id":"0012073"}}}


id: PBO:0079900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, complex III subunit XI","termid":"PBO:0079900"}


id: PBO:0046122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E pseudogene 1","termid":"PBO:0046122"}


id: PBO:0071837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 32","termid":"PBO:0071837"}


id: PBO:0002899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nudix family hydrolase","termid":"PBO:0002899"}


id: MONDO:0024240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma with eccrine differentiation arising from the sweat glands. It includes the following subtypes: ductal eccrine adenocarcinoma, papillary eccrine carcinoma, and eccrine porocarcinoma.","definition_xrefs":["NCIT:C27255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine sweat gland cancer","termid":"MONDO:0005506"},{"relation_name":"is_a","term_name":"sweat gland carcinoma","termid":"MONDO:0005524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"eccrine carcinoma","secondary_identifiers":["ICDO:8413/3","MEDGEN:724404","SCTID:400173004","UMLS:C1302864","DOID:4920"],"synonyms":[{"name":"carcinoma of eccrine sweat gland","type":"exact"},{"name":"carcinoma, eccrine gland, malignant","type":"exact"},{"name":"eccrine adenocarcinoma","type":"exact"},{"name":"eccrine adenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"eccrine carcinoma","type":"exact"},{"name":"eccrine carcinoma of skin","type":"exact"},{"name":"eccrine sweat gland adenocarcinoma","type":"exact"},{"name":"eccrine sweat gland carcinoma","type":"exact"}],"termid":"MONDO:0024240","xrefs":{"Monarch":{"xref_id":"0024240"}}}


id: PBO:0054746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2155","termid":"PBO:0054746"}


id: GO:1990332
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type-I transmembrane protein complex located in the endoplasmic reticulum (ER) consisting of an IRE1-IRE1 dimer, which forms in response to the accumulation of unfolded protein in the ER. The dimeric complex has endoribonuclease (RNase) activity and evokes the unfolded protein response (UPR) by cleaving an intron of a mRNA coding for the transcription factor HAC1 in yeast or XBP1 in mammals; the complex cleaves a single phosphodiester bond in each of two RNA hairpins (with non-specific base paired stems and loops of consensus sequence CNCNNGN, where N is any base) to remove an intervening intron from the target transcript.","definition_xrefs":["GOC:bf","GOC:bhm","PMID:18191223","PMID:25437541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005789","GO:0032991","GO:0005783"],"is_obsolete":false,"name":"Ire1 complex","synonyms":[{"name":"ER-bound kinase/endoribonuclease (RNase), inositol-requiring enzyme-1","type":"exact"},{"name":"ERN1 complex","type":"related"},{"name":"IRE1 dimer","type":"exact"},{"name":"Ire1 complex dimer","type":"exact"},{"name":"Ire1 complex homodimer","type":"exact"},{"name":"Ire1 complex homooligomer","type":"exact"}],"termid":"GO:1990332"}


id: PBO:0055365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2794","termid":"PBO:0055365"}


id: PATO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000144 solid substance (obsolete PATO:0000144)","termid":"PATO:0000144"}


id: MONDO:0007644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decreased or absent levels of serum immunoglobulin A, with normal serum levels of immunoglobulin G and immunoglobulin M in a patient who is older than 4 years of age and in whom all other causes of hypogammaglobulinemia have been excluded. Affected individuals may be asymptomatic or have frequent infections, allergic reactions, or autoimmune disorders.","definition_xrefs":["NCIT:C123434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selective IgA deficiency disease","termid":"MONDO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"IgAD1","secondary_identifiers":["UMLS:C2931161","MESH:C536290","MEDGEN:419725","OMIM:137100"],"synonyms":[{"name":"IGAD1","type":"exact"},{"name":"IMMUNOGLOBULIN A deficiency 1","type":"related"},{"name":"IgA, selective deficiency of","type":"related"},{"name":"IgAD1","type":"exact"},{"name":"Immunoglobulin A, selective deficiency of","type":"related"},{"name":"gamma-A-globulin, selective deficiency of","type":"related"},{"name":"immunoglobulin A deficiency, autosomal recessive, autosomal dominant, isolated cases","type":"exact"}],"termid":"MONDO:0007644","xrefs":{"Monarch":{"xref_id":"0007644"}}}


id: PBO:0017958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex ubiquitin-protein ligase E3 subunit Gid2/Rmd5 (predicted)","termid":"PBO:0017958"}


id: MONDO:0008791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anencephaly is a neural tube defect. This malformation is characterized by the total or partial absence of the cranial vault and the covering skin, the brain being missing or reduced to a small mass. Most cases are stillborn, although some infants have been reported to survive for a few hours or even a few days.","definition_xrefs":["Orphanet:1048"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"anencephaly","termid":"MONDO:0000819"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"anencephaly 1","secondary_identifiers":["ICD9:740.0","OMIM:206500","GARD:5808","MEDGEN:1794138","SCTID:89369001","UMLS:C5561928"],"synonyms":[{"name":"ANPH","type":"broad"},{"name":"absence of a large part of the brain and the skull","type":"related"},{"name":"anencephaly","type":"broad"},{"name":"anencephaly 1","type":"exact"},{"name":"isolated anencephaly/exencephaly","type":"exact"}],"termid":"MONDO:0008791","xrefs":{"Monarch":{"xref_id":"0008791"}}}


id: GO:0106248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of poly(A)-specific ribonuclease activity.","definition_xrefs":["GOC:mah","PMID:29932902"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of poly(A)-specific ribonuclease activity (obsolete GO:0106248)","termid":"GO:0106248"}


id: MOD:02066
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-aspartic acid residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"}


id: PBO:0087829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIIB B-related factor; one of three subunits of RNA polymerase III transcription initiation factor TFIIIB, binds TFIIIC and TBP and recruits RNA pol III to promoters, amino-terminal half is homologous to TFIIB; mutations in human homolog are associated with autosomal recessive cerebellar-facial-dental syndrome","termid":"PBO:0087829"}


id: GO:0035530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 6 (CCL6) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:19812544","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 6 production","synonyms":[{"name":"CCL6 production","type":"exact"}],"termid":"GO:0035530"}


id: PBO:0049070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 87","termid":"PBO:0049070"}


id: PBO:0043513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 8","termid":"PBO:0043513"}


id: FYPO:0003033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to glucose starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during glucose starvation","synonyms":[{"name":"increased RNA accumulation during glucose starvation","type":"related"},{"name":"increased RNA level during glucose depletion","type":"exact"},{"name":"increased RNA level during glucose deprivation","type":"exact"},{"name":"increased RNA level during glucose limitation","type":"related"},{"name":"increased transcript level during glucose starvation","type":"exact"}],"termid":"FYPO:0003033"}


id: GO:2000265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation, extrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, extrinsic pathway","termid":"GO:2000263"},{"relation_name":"positively_regulates","term_name":"blood coagulation, extrinsic pathway","termid":"GO:0007598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"positive regulation of blood coagulation, extrinsic pathway","termid":"GO:2000265"}


id: MONDO:0006337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic disorder characterized by the growth of endometrial tissue in the ovaries. It results in the development of blood filled ovarian cysts (chocolate cysts), and creation of scars and adhesions.","definition_xrefs":["NCIT:C27628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometriosis","termid":"MONDO:0005133"},{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometriosis","secondary_identifiers":["ICD10CM:N80.1","ICD9:617.1","MEDGEN:102350","UMLS:C0156344","SCTID:266589005","DOID:11432","EFO:1000418"],"synonyms":[{"name":"endometriosis (disease) of ovary","type":"exact"},{"name":"endometriosis of ovary","type":"exact"},{"name":"ovarian endometriosis","type":"exact"},{"name":"ovary endometriosis (disease)","type":"exact"}],"termid":"MONDO:0006337","xrefs":{"Monarch":{"xref_id":"0006337"}}}


id: PR:Q9P7Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug51 gene.","definition_xrefs":["UniProtKB:Q9P7Q6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 51 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.09","synonyms":[{"name":"Spom972h-mug51","type":"exact"}],"termid":"PR:Q9P7Q6"}


id: PR:000085719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-36. Example: UniProtKB:P10651, 2-136, Lys-37, MOD:00663.","definition_xrefs":["PRO:DAN","PMID:37459529","PomBase:VW"],"direct_ancestors":[{"relation_name":"has_part","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K36)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-37, MOD:00663","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K36Me","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-37, MOD:00663","type":"exact"},{"name":"hht3/Me(K36)","type":"exact"}],"termid":"PR:000085719"}


id: GO:0032331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chondrocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of cartilage development","termid":"GO:0061037"},{"relation_name":"negatively_regulates","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chondrocyte differentiation","synonyms":[{"name":"down regulation of chondrocyte differentiation","type":"exact"},{"name":"down-regulation of chondrocyte differentiation","type":"exact"},{"name":"downregulation of chondrocyte differentiation","type":"exact"},{"name":"inhibition of chondrocyte differentiation","type":"narrow"}],"termid":"GO:0032331"}


id: PBO:0028629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_threonine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0028629"}


id: GO:1900857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of fumitremorgin B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fumitremorgin B biosynthetic process (obsolete GO:1900857)","synonyms":[{"name":"up regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"up-regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"upregulation of fumitremorgin B biosynthetic process","type":"exact"}],"termid":"GO:1900857"}


id: PBO:0072244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 19","termid":"PBO:0072244"}


id: PBO:0062472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 163 pseudogene","termid":"PBO:0062472"}


id: GO:0033767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4'-hydroxyacetophenone + H+ + NADPH + O2 = 4-hydroxyphenyl acetate + H2O + NADP+.","definition_xrefs":["EC:1.14.13.84","RHEA:22916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxyacetophenone monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0756","MetaCyc:1.14.13.84-RXN","KEGG_REACTION:R06892"],"synonyms":[{"name":"(4-hydroxyphenyl)ethan-1-one,NADPH:oxygen oxidoreductase (ester-forming) activity","type":"exact"},{"name":"HAPMO","type":"related"}],"termid":"GO:0033767"}


id: FYPO:0007318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which stress granule assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal stress granule assembly","synonyms":[{"name":"abnormal cytoplasmic stress granule assembly","type":"exact"},{"name":"abnormal stress granule formation","type":"exact"}],"termid":"FYPO:0007318"}


id: PBO:0051272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 3","termid":"PBO:0051272"}


id: GO:0034336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RNA molecule that has assumed an incorrect conformation.","definition_xrefs":["GOC:mah","PMID:10393192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"misfolded RNA binding","synonyms":[{"name":"RNA chaperone","type":"related"}],"termid":"GO:0034336"}


id: PBO:0047409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 47","termid":"PBO:0047409"}


id: PBO:0066257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 5","termid":"PBO:0066257"}


id: PBO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine transporter (predicted)","termid":"PBO:0002594"}


id: GO:0061999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac endothelial to mesenchymal transition.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:26857067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cardiac endothelial to mesenchymal transition","termid":"GO:0140074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0061999"}


id: GO:0008774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde + CoA + NAD+ = acetyl-CoA + NADH + H+.","definition_xrefs":["EC:1.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acetaldehyde dehydrogenase (acetylating) activity","secondary_identifiers":["MetaCyc:ACETALD-DEHYDROG-RXN","RHEA:23288"],"synonyms":[{"name":"ADA","type":"related"},{"name":"DmpF","type":"related"},{"name":"acetaldehyde:NAD+ oxidoreductase (CoA-acetylating)","type":"related"},{"name":"acylating acetaldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (acylating) activity","type":"related"}],"termid":"GO:0008774"}


id: MONDO:0017117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital non-communicating hydrocephalus","secondary_identifiers":["GARD:17272","MEDGEN:1616373","UMLS:C4546092","SCTID:762295002","Orphanet:269510"],"synonyms":[{"name":"congenital obstructive hydrocephalus","type":"exact"}],"termid":"MONDO:0017117","xrefs":{"Monarch":{"xref_id":"0017117"}}}


id: GO:0060685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of prostatic bud formation, the morphogenetic process in which a region of the fetal urogenital sinus epithelium is specified to become the prostate, resulting in prostate bud outgrowth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ formation","termid":"GO:0003156"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of prostatic bud formation","termid":"GO:0060685"}


id: MONDO:0011399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited hemoglobinopathy characterized by impaired synthesis of alpha-globin chains leading to a variable clinical picture depending on the number of affected alleles.","definition_xrefs":["Orphanet:846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thalassemia","termid":"MONDO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"alpha thalassemia spectrum","secondary_identifiers":["UMLS:C0002312","ICD10CM:D56.0","MedDRA:10043390","MEDGEN:1434","OMIM:604131","SCTID:68913001","ICD9:282.43","MESH:D017085","ICD9:282.49","NANDO:2201273","DOID:1099","NCIT:C34368","GARD:621","icd11.foundation:531667506","NORD:1902"],"synonyms":[{"name":"A-thalassemia","type":"related"},{"name":"alpha thalassaemia","type":"exact"},{"name":"alpha thalassemia spectrum","type":"exact"},{"name":"alpha-thalassemia","type":"exact"},{"name":"alpha-thalassemia trait","type":"related"},{"name":"thalassemia, alpha-","type":"exact"},{"name":"thalassemias, alpha-","type":"exact"}],"termid":"MONDO:0011399","xrefs":{"Monarch":{"xref_id":"0011399"}}}


id: MOD:01720
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01720"}


id: PBO:0004525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucosidase Psu2 (predicted)","termid":"PBO:0004525"}


id: MONDO:0012929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Compton-North congenital myopathy","secondary_identifiers":["UMLS:C2675527","DOID:0080101","GARD:17111","MESH:C567261","MEDGEN:393406","OMIM:612540","Orphanet:210163"],"synonyms":[{"name":"Compton-North congenital myopathy","type":"exact"},{"name":"MYPCN","type":"related"},{"name":"congenital lethal myopathy, Compton-North type","type":"related"},{"name":"myopathy, congenital, Compton-NORTH","type":"related"}],"termid":"MONDO:0012929","xrefs":{"Monarch":{"xref_id":"0012929"}}}


id: GO:0070545
data:
  {"annotated_genes":["SJAG_02759","SJAG_00882","SJAG_02830"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99586,105157,109948],"is_not":false,"summary":null,"term":"GO:0070545"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in coordinating ribosome biogenesis with cell cycle progression. In human, it is composed of Pes1, Bop1, and WDR12; in Saccharomyces the proteins are known as Nop7p, Erb1 and Ytm1 respectively.","definition_xrefs":["GOC:ab","PMID:16043514","PMID:17353269","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00882":null,"SJAG_02759":null,"SJAG_02830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005730","GO:0030684","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PeBoW complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070545","terms_by_termid":{"GO:0070545":null}}


id: PBO:0056445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 18","termid":"PBO:0056445"}


id: PR:Q9P3V4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPBC1348.06c/SPBPB2B2.15.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3V4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VEL1-related protein BPB2B2.15/BC1348.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.15","synonyms":[{"name":"Spom972h-SPBPB2B2.15","type":"exact"}],"termid":"PR:Q9P3V4"}


id: PBO:0061654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUFIP1 pseudogene 1","termid":"PBO:0061654"}


id: PBO:0046929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member C","termid":"PBO:0046929"}


id: PBO:0003328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp10 (predicted)","termid":"PBO:0003328"}


id: GO:0009427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the rings of the bacterial-type flagellar basal body; anchors the basal body to the outer membrane.","definition_xrefs":["GOC:cilia","GOC:mtg_sensu","PMID:10572114","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body, distal rod","termid":"GO:0009426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, distal rod, L ring","synonyms":[{"name":"flagellar basal body, distal rod, L ring","type":"exact"},{"name":"flagellin-based flagellum basal body, distal rod, L ring","type":"exact"}],"termid":"GO:0009427"}


id: PATO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape constituting a transition between a rectangle and a circle; a closed curve, of which the circle and ellipse are special cases, whose parametric equation is x = a.cos2/rt, y = b.cos2/rt","definition_xrefs":["wiktionary:superellipse"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superelliptic","synonyms":[{"name":"Lamé curve","type":"exact"}],"termid":"PATO:0002318"}


id: PBO:0071386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 9","termid":"PBO:0071386"}


id: PBO:0068994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 238, pseudogene","termid":"PBO:0068994"}


id: GO:1901795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-(3-hydroxyphenyl)propanoate.","definition_xrefs":["PMID:10537203","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"3-(3-hydroxyphenyl)propanoate metabolic process","termid":"GO:1901793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propanoate biosynthetic process","synonyms":[{"name":"3-(3-hydroxyphenyl)propanoate anabolism","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate biosynthesis","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate formation","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate synthesis","type":"exact"}],"termid":"GO:1901795"}


id: PATO:0001731
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a plant by virtue of the bearer's disposition to shed foliage.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deciduous (plant)","termid":"PATO:0001731"}


id: PBO:0088746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex WD repeat subunit Hip2","termid":"PBO:0088746"}


id: GO:1901596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reversine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to reversine","termid":"GO:1901596"}


id: GO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + 3 1,5-dihydrocoenzyme F420 = hydrogen sulfide + 3 H2O + 3 coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["PMID:16048999","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (coenzyme F420) activity","synonyms":[{"name":"coenzyme F420-dependent sulfite reductase activity","type":"exact"},{"name":"coenzyme F420-sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"sulfite:reduced coenzyme F420 reductase activity","type":"exact"}],"termid":"GO:0052806"}


id: MONDO:0017421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic terminal limb defects (obsolete MONDO:0017421)","secondary_identifiers":["Orphanet:294929"],"synonyms":[{"name":"isolated terminal limb defects","type":"related"},{"name":"nonsyndromic terminal limb defects","type":"exact"},{"name":"terminal limb defects","type":"exact"},{"name":"terminal meromelia","type":"exact"}],"termid":"MONDO:0017421","xrefs":{"Monarch":{"xref_id":"0017421"}}}


id: PBO:0091944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Knh2","termid":"PBO:0091944"}


id: PBO:0066649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 3","termid":"PBO:0066649"}


id: FYPO_EXT:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"intermediate fraction of cells (penetrance) or moderate phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium","termid":"FYPO_EXT:0000002"}


id: GO:0140420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a heme from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transport","termid":"GO:0015886"},{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"heme import into cell","synonyms":[{"name":"heme assimilation","type":"broad"}],"termid":"GO:0140420"}


id: PBO:0045281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 32","termid":"PBO:0045281"}


id: PBO:0003652
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Random Septum Postioning","termid":"PBO:0003652"}


id: GO:2000905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"negatively_regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of starch metabolic process","synonyms":[{"name":"negative regulation of starch metabolism","type":"exact"}],"termid":"GO:2000905"}


id: PBO:0089322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase Put1","termid":"PBO:0089322"}


id: PBO:0044740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX19A divergent transcript","termid":"PBO:0044740"}


id: PBO:0048899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 23, pseudogene","termid":"PBO:0048899"}


id: PBO:0049123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor associated sorting protein family member 3","termid":"PBO:0049123"}


id: PBO:0072994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCML2 pseudogene 1","termid":"PBO:0072994"}


id: MOD:00062
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to N-acetyl-L-tyrosine.","definition_xrefs":["PubMed:11857757","RESID:AA0053","PubMed:11999733","PubMed:15350136","PubMed:2506074","PubMed:12175151","PubMed:14730666","PubMed:475783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-tyrosine","synonyms":[{"name":"(2S)-2-acetamido-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-acetylamino-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"AcTyr","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetyltyrosine","type":"exact"},{"name":"N-acetyl-L-tyrosine","type":"exact"},{"name":"N-acetylated L-tyrosine","type":"exact"},{"name":"N-acetyltyrosine","type":"exact"}],"termid":"MOD:00062"}


id: GO:0031730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR5 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CCR5 chemokine receptor binding","synonyms":[{"name":"CCR5 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031730"}


id: PBO:0050709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 7","termid":"PBO:0050709"}


id: GO:0140596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large mitochondrial outer membrane translocase complex that mediates transport of proteins into mitochondrial compartments. TOM transports beta-barrel precursors across the outer membrane and the sorting and assembly machinery (SAM complex) inserts them into the target membrane.","definition_xrefs":["PMID:33035511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial outer membrane translocase complex","termid":"GO:0005742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"TOM complex","synonyms":[{"name":"translocase of the outer mitochondrial membrane","type":"exact"}],"termid":"GO:0140596"}


id: PBO:0079968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 6","termid":"PBO:0079968"}


id: PBO:0046415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPHA1 antisense RNA 1","termid":"PBO:0046415"}


id: GO:0015096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete manganese resistance permease activity (obsolete GO:0015096)","synonyms":[{"name":"manganese resistance permease activity","type":"exact"}],"termid":"GO:0015096"}


id: GO:1901220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber morphogenesis","termid":"GO:1901219"},{"relation_name":"negatively_regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac chamber morphogenesis","synonyms":[{"name":"down regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down regulation of heart chamber morphogenesis","type":"exact"},{"name":"down-regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down-regulation of heart chamber morphogenesis","type":"exact"},{"name":"downregulation of cardiac chamber morphogenesis","type":"exact"},{"name":"downregulation of heart chamber morphogenesis","type":"exact"},{"name":"inhibition of cardiac chamber morphogenesis","type":"narrow"},{"name":"inhibition of heart chamber morphogenesis","type":"narrow"},{"name":"negative regulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901220"}


id: PBO:0041840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 20","termid":"PBO:0041840"}


id: FYPO:0005558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of microtubule bundles is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule bundle","secondary_identifiers":["FYPO:0005795"],"synonyms":[{"name":"abnormal MT bundle","type":"exact"},{"name":"abnormal microtubule array","type":"related"},{"name":"abnormal microtubule bundle physical object quality","type":"exact"},{"name":"abnormal microtubule bundle structure","type":"narrow"}],"termid":"FYPO:0005558"}


id: MONDO:0011160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the GIPC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 15","secondary_identifiers":["GARD:22591","OMIM:601869","MESH:C566611","DOID:0110470","MEDGEN:355626","UMLS:C1866094"],"synonyms":[{"name":"DFNB15","type":"narrow"},{"name":"DFNB72","type":"narrow"},{"name":"DFNB95","type":"narrow"},{"name":"GIPC3 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 15","type":"narrow"},{"name":"autosomal recessive deafness 72","type":"narrow"},{"name":"autosomal recessive deafness 95","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 15","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in GIPC3","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 15","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 15","type":"exact"},{"name":"deafness, autosomal recessive 15","type":"narrow"},{"name":"deafness, autosomal recessive 72","type":"narrow"},{"name":"deafness, autosomal recessive 95","type":"narrow"},{"name":"deafness, autosomal recessive type 15","type":"narrow"}],"termid":"MONDO:0011160","xrefs":{"Monarch":{"xref_id":"0011160"}}}


id: PR:O14218
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 phosphatases regulator ypi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.13","synonyms":[{"name":"Spom972h-SPAC6B12.13","type":"exact"}],"termid":"PR:O14218"}


id: PBO:0026727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_mitosis","termid":"PBO:0026727"}


id: MONDO:0009704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The myopathic form of carnitine palmitoyltransferase II (CPT II) deficiency, an inherited metabolic disorder that affects mitochondrial oxidation of long chain fatty acids (LCFA), is the most common and the least severe form of CPT II deficiency.","definition_xrefs":["Orphanet:228302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine palmitoyltransferase II deficiency","termid":"MONDO:0015515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"carnitine palmitoyl transferase II deficiency, myopathic form","secondary_identifiers":["MEDGEN:371584","GARD:17149","OMIM:255110","UMLS:C1833508","MESH:C563461"],"synonyms":[{"name":"CARNITINE PALMITOYLTRANSFERASE II deficiency, late-onset","type":"related"},{"name":"CARNITINE PALMITOYLTRANSFERASE II deficiency, myopathic, stress-induced","type":"related"},{"name":"CPT 2 deficiency, myopathic","type":"related"},{"name":"CPT II deficiency, myopathic, stress-induced","type":"exact"},{"name":"CPT2, adult-onset form","type":"exact"},{"name":"CPT2, myopathic form","type":"exact"},{"name":"CPTII, adult-onset form","type":"exact"},{"name":"CPTII, myopathic form","type":"exact"},{"name":"Carnitine Palmitoyltransferase 2 deficiency, adult-onset","type":"related"},{"name":"Carnitine Palmitoyltransferase 2 deficiency, myopathic","type":"related"},{"name":"Carnitine Palmitoyltransferase 2 deficiency, myopathic, stress-induced","type":"related"},{"name":"Carnitine palmitoyl transferase II deficiency, adult-onset form","type":"exact"},{"name":"Carnitine palmitoyl transferase deficiency type 2, adult-onset form","type":"exact"},{"name":"Carnitine palmitoyl transferase deficiency type 2, myopathic form","type":"exact"},{"name":"Cpt2 deficiency, late-onset","type":"related"},{"name":"carnitine palmitoyl transferase II deficiency, myopathic form","type":"exact"}],"termid":"MONDO:0009704","xrefs":{"Monarch":{"xref_id":"0009704"}}}


id: MONDO:0013245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"excluded_subClassOf","term_name":"obsolete intractable diarrhea of infancy (obsolete MONDO:0019126)","termid":"MONDO:0019126"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune enteropathy","termid":"MONDO:0019787"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic multisystem autoimmune disease due to ITCH deficiency","secondary_identifiers":["OMIM:613385","icd11.foundation:1970749000","MEDGEN:461999","Orphanet:228426","UMLS:C3150649","GARD:10775","NANDO:2200739"],"synonyms":[{"name":"ADMFD","type":"related"},{"name":"ITCH E3 ubiquitin ligase deficiency","type":"related"},{"name":"autoimmune disease, multisystem, with facial dysmorphism","type":"related"},{"name":"autoimmune disease, syndromic multisystem","type":"related"},{"name":"syndromic multisystem autoimmune disease","type":"related"},{"name":"syndromic multisystem autoimmune disease due to ITCH deficiency","type":"exact"}],"termid":"MONDO:0013245","xrefs":{"Monarch":{"xref_id":"0013245"}}}


id: GO:0102786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + a stearoyl-[acp] + a reduced ferredoxin = 2 H2O + an oleoyl-[acp] + an oxidized ferredoxin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete stearoyl-[acp] desaturase activity (obsolete GO:0102786)","termid":"GO:0102786"}


id: PBO:0048504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 5","termid":"PBO:0048504"}


id: PBO:0090969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding and 3'-end processing protein Seb1","termid":"PBO:0090969"}


id: PBO:0085899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in chitin biosynthesis by regulation of Chs3p export from the ER; relocalizes from bud neck to ER upon DNA replication stress","termid":"PBO:0085899"}


id: MOD:02050
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-leucine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-leucine residue","synonyms":[{"name":"XlnkLeu","type":"exact"}],"termid":"MOD:02050"}


id: GO:1901155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paromomycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"paromomycin metabolic process","termid":"GO:1901153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"paromomycin biosynthetic process","synonyms":[{"name":"paromomycin anabolism","type":"exact"},{"name":"paromomycin biosynthesis","type":"exact"},{"name":"paromomycin formation","type":"exact"},{"name":"paromomycin synthesis","type":"exact"}],"termid":"GO:1901155"}


id: MONDO:0007230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachymorphism-onychodysplasia-dysphalangism (BOD) is a very rare malformation syndrome that is characterized by short stature, hypoplastic fifth digits with tiny dysplastic nails, facial dysmorphism with coarse features including a wide mouth and broad nose, and mild intellectual disability. It has been suggested that Coffin-Siris syndrome and BOD syndrome are perhaps allelic variants.","definition_xrefs":["Orphanet:1292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","secondary_identifiers":["OMIM:113477","SCTID:720573009","UMLS:C1862082","GARD:918","MEDGEN:350585","MESH:C536242"],"synonyms":[{"name":"Brachymorphism onychodysplasia dysphalangism syndrome","type":"related"},{"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","type":"exact"},{"name":"Senior syndrome","type":"exact"},{"name":"bod syndrome","type":"exact"}],"termid":"MONDO:0007230","xrefs":{"Monarch":{"xref_id":"0007230"}}}


id: GO:0034614
data:
  {"annotated_genes":["SJAG_03653","SJAG_00141","SJAG_04953","SJAG_01216","SJAG_03303","SJAG_04823","SJAG_01734","SJAG_04788","SJAG_00668","SJAG_02515","SJAG_01199","SJAG_05181","SJAG_04399","SJAG_04403","SJAG_04632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99188],"is_not":false,"summary":null,"term":"GO:0034614"},{"annotations":[117413,99187,104203,94389,107983,116498],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[88191,57866,98468,88611,99344,92334,64716,109240,109284,68171],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to reactive oxygen species","termid":"GO:0000302"},{"relation_name":"is_a","term_name":"cellular response to oxidative stress","termid":"GO:0034599"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00668":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to reactive oxygen species","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular response to AOS","type":"exact"},{"name":"cellular response to ROI","type":"exact"},{"name":"cellular response to ROS","type":"exact"},{"name":"cellular response to active oxygen species","type":"exact"},{"name":"cellular response to reactive oxidative species","type":"exact"},{"name":"cellular response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:0034614","terms_by_termid":{"GO:0019430":null,"GO:0034614":null,"GO:0061692":null}}


id: FYPO:0005452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one of two different alleles of a gene is lost more frequently than normal after a double-strand break forms nearby.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased break-induced loss of heterozygosity","synonyms":[{"name":"increased break-induced loss of heterozygosity during mitotic cell cycle","type":"related"},{"name":"increased break-induced loss of heterozygosity during vegetative growth","type":"exact"}],"termid":"FYPO:0005452"}


id: PBO:0091972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf18","termid":"PBO:0091972"}


id: PBO:0084978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in detoxification of furfural; expression is up-regulated in the presence of furfural and 5-hydroxymethylfurfural, which are compounds generated during lignocellulosic biomass pre-treatment; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0084978"}


id: PBO:0003494
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facilitates Rhp51 assembly at damage sites independently of Rhp57","termid":"PBO:0003494"}


id: PBO:0060942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2 like 3 pseudogene 2","termid":"PBO:0060942"}


id: GO:0047928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + gibberellin = UDP + gibberellin 2-O-beta-D-glucoside.","definition_xrefs":["MetaCyc:GIBBERELLIN-BETA-GLUCOSYLTRANSFERASE-RXN","EC:2.4.1.176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gibberellin beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:20025"],"synonyms":[{"name":"UDP-glucose:gibberellin 2-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:gibberellin 2-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"gibberellin b-glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-gibberellate 3-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-gibberellate 7-glucosyltransferase activity","type":"related"}],"termid":"GO:0047928"}


id: MONDO:0017853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypersensitivity pneumonitis (HP) is a pulmonary disease with symptoms of dyspnea and cough resulting from the inhalation of an antigen to which the subject has been previously sensitized.","definition_xrefs":["Orphanet:31740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic respiratory disease","termid":"MONDO:0000771"},{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypersensitivity pneumonitis","secondary_identifiers":["ICD9:495.9","NORD:761","SCTID:37471005","GARD:12","ICD10CM:J67.2","MedDRA:10001890","MESH:D000542","UMLS:C0002390","DOID:841","ICD9:495.8","MEDGEN:1446","ICD9:495","NCIT:C34369","ICD10CM:J67.1"],"synonyms":[{"name":"HP","type":"exact"},{"name":"allergic form of pneumonitis","type":"exact"},{"name":"allergic interstitial pneumonitis","type":"related"},{"name":"allergic pneumonitis","type":"exact"},{"name":"alveolitis","type":"exact"},{"name":"alveolitis, extrinsic allergic","type":"related"},{"name":"exogen allergic alveolitis","type":"exact"},{"name":"extrinsic allergic alveolitis","type":"exact"},{"name":"extrinsic allergic pneumonia hypersensitivity pneumonitis","type":"related"},{"name":"hypersensitivity pneumonitis","type":"exact"}],"termid":"MONDO:0017853","xrefs":{"Monarch":{"xref_id":"0017853"}}}


id: FYPO:0000475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or both meiotic nuclear division(s) is arrested under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"abnormally arrested meiotic cell cycle","termid":"FYPO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormally arrested meiosis","synonyms":[{"name":"abnormally arrested meiotic nuclear division","type":"exact"},{"name":"meiosis: arrested","type":"related"},{"name":"meiotic cell cycle arrest in M phase","type":"exact"}],"termid":"FYPO:0000475"}


id: PBO:0081040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 18","termid":"PBO:0081040"}


id: MONDO:0015038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type E (LCHe) is a form of lissencephaly with cerebellar hypoplasia, characterized by an abrupt transition from agyria to gyral simplification, near the boundary between frontal and parietal cortex, microcephaly (B1 3 SD) and brainstem hypoplasia.","definition_xrefs":["Orphanet:100015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type E","secondary_identifiers":["icd11.foundation:252327835","MEDGEN:1676990","GARD:19735","UMLS:C5191422"],"termid":"MONDO:0015038","xrefs":{"Monarch":{"xref_id":"0015038"}}}


id: PR:Q9P7J2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- xlf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xrcc4-like factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.14c","synonyms":[{"name":"Spom972h-xlf1","type":"exact"},{"name":"meiotically up-regulated gene 104 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-homologous end-joining protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7J2"}


id: PBO:0091340
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulated by Different Signals","termid":"PBO:0091340"}


id: PR:P78798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal targeting signal 2 receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01952","PANTHER:PTHR22850:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal 2 receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.01","secondary_identifiers":["UniProtKB:P78798"],"synonyms":[{"name":"PTS2 receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PEX7","type":"exact"},{"name":"peroxin-7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78798"}


id: FYPO:0002463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable curved septated vegetative cell","termid":"FYPO:0002282"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002481"],"synonyms":[{"name":"inviable branched, curved cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved septated cell","type":"exact"},{"name":"inviable branched, curved vegetative cell","type":"exact"},{"name":"inviable branched curved cell","type":"exact"},{"name":"inviable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, curved septated cell","type":"exact"},{"name":"inviable branched, long, curved, septated cell","type":"exact"},{"name":"inviable curved branched cell","type":"exact"},{"name":"inviable curved branched elongated cell","type":"exact"},{"name":"inviable elongated branched curved cell","type":"exact"},{"name":"lethal; branched, curved, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002463"}


id: PBO:0027103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription_at_highly_transcribed_protein-coding_genes","termid":"PBO:0027103"}


id: PBO:0063798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline, histidine and glycine rich 1","termid":"PBO:0063798"}


id: FYPO:0007143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-deoxyribonuclease (pyrimidine dimer) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0007143"}


id: PBO:0051252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-13-1 (pseudogene)","termid":"PBO:0051252"}


id: GO:0035909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an aorta are generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body.","definition_xrefs":["Wikipedia:Aorta","GOC:dgh","GOC:bf","MA:0000062","UBERON:0000947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"part_of","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aorta morphogenesis","termid":"GO:0035909"}


id: PBO:0028828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_localization_to_chromatin","termid":"PBO:0028828"}


id: PBO:0043510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 5","termid":"PBO:0043510"}


id: PBO:0087022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L10; homologous to mammalian ribosomal protein L10 and bacterial L16; responsible for joining the 40S and 60S subunits; regulates translation initiation; similar to members of the QM gene family; protein abundance increases under DNA replication stress; mutations in human homolog implicated in T-cell acute lymphoblastic leukemia and also autism spectrum disorders (ASD); human RPL10 can complement yeast null mutant","termid":"PBO:0087022"}


id: PBO:0000552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin (predicted)","termid":"PBO:0000552"}


id: PBO:0074849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38B","termid":"PBO:0074849"}


id: PBO:0051741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 8","termid":"PBO:0051741"}


id: MONDO:0014446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBIP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 18","secondary_identifiers":["DOID:0110140","OMIM:615995","MEDGEN:812504","UMLS:C3806174","GARD:16042"],"synonyms":[{"name":"BBIP1 Bardet-Biedl syndrome","type":"exact"},{"name":"BBS18","type":"exact"},{"name":"Bardet-Biedl syndrome 18","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBIP1","type":"exact"},{"name":"Bardet-Biedl syndrome type 18","type":"exact"}],"termid":"MONDO:0014446","xrefs":{"Monarch":{"xref_id":"0014446"}}}


id: PBO:0041302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 5","termid":"PBO:0041302"}


id: GO:0001578
data:
  {"annotated_genes":["SJAG_04841","SJAG_01613","SJAG_01546","SJAG_03073","SJAG_04566","SJAG_03264","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95966,96481,98420,100618,111899,111909,117272],"is_not":false,"summary":null,"term":"GO:0001578"}]},"cv_name":"biological_process","definition":"A process that results in a parallel arrangement of microtubules.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_02624":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_04566":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule bundle formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule bundling","type":"exact"}],"termid":"GO:0001578","terms_by_termid":{"GO:0001578":null}}


id: PBO:0074461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4 pseudogene 1","termid":"PBO:0074461"}


id: PBO:0038551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 6","termid":"PBO:0038551"}


id: SO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified guanine DNA base feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_guanine","termid":"SO:0001964"}


id: GO:0060242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which information about the density of cells in a population is received by direct cell-cell contact and is converted into a molecular signal, resulting in the cessation of cell growth or proliferation.","definition_xrefs":["GOC:dph","PMID:17376520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of cell density","termid":"GO:0060245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"contact inhibition","secondary_identifiers":["GO:0060248","Wikipedia:Contact_inhibition","GO:0060246"],"synonyms":[{"name":"detection of cell density by contact stimulus","type":"related"},{"name":"detection of cell density by contact stimulus involved in contact inhibition","type":"related"}],"termid":"GO:0060242"}


id: PATO:0000358
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000358 sugar concentration value (obsolete PATO:0000358)","termid":"PATO:0000358"}


id: PATO:0002376
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being filled with air.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflated","synonyms":[{"name":"air-filled","type":"exact"}],"termid":"PATO:0002376"}


id: GO:0051965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system development","termid":"GO:0051962"},{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"positively_regulates","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of synapse assembly","synonyms":[{"name":"activation of synapse assembly","type":"narrow"},{"name":"positive regulation of synapse biogenesis","type":"exact"},{"name":"positive regulation of synaptogenesis","type":"exact"},{"name":"stimulation of synapse assembly","type":"narrow"},{"name":"up regulation of synapse assembly","type":"exact"},{"name":"up-regulation of synapse assembly","type":"exact"},{"name":"upregulation of synapse assembly","type":"exact"}],"termid":"GO:0051965"}


id: MONDO:0007749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive infantile hypercalcemia (obsolete MONDO:0007749)","termid":"MONDO:0007749","xrefs":{"Monarch":{"xref_id":"0007749"}}}


id: PBO:0065751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYDC2 antisense RNA 1","termid":"PBO:0065751"}


id: PBO:0070805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 35","termid":"PBO:0070805"}


id: GO:0015963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate biosynthetic process","termid":"GO:0015960"},{"relation_name":"is_a","term_name":"diadenosine triphosphate metabolic process","termid":"GO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"diadenosine triphosphate biosynthetic process","synonyms":[{"name":"diadenosine triphosphate anabolism","type":"exact"},{"name":"diadenosine triphosphate biosynthesis","type":"exact"},{"name":"diadenosine triphosphate formation","type":"exact"},{"name":"diadenosine triphosphate synthesis","type":"exact"}],"termid":"GO:0015963"}


id: PBO:0067400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 507, pseudogene","termid":"PBO:0067400"}


id: GO:0160138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2604) in 23S rRNA = pseudouridine(2604) in 23S rRNA.","definition_xrefs":["RHEA:38875","EC:5.4.99.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2604) synthase activity","termid":"GO:0160138"}


id: MONDO:0031447
data:
  {"annotated_genes":["SJAG_04387","SJAG_04003","SJAG_02509"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[86181,86180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia, isolated","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:613112"],"termid":"MONDO:0031447","terms_by_termid":{"MONDO:0030827":null,"MONDO:0800047":null},"xrefs":{"Monarch":{"xref_id":"0031447"}}}


id: PBO:0085539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9A has a paralog, RPS9B, that arose from the whole genome duplication","termid":"PBO:0085539"}


id: GO:0036367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ability of a photoreceptor to adjust to varying levels of light.","definition_xrefs":["GOC:gap","PMID:16039565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"light adaption","termid":"GO:0036367"}


id: GO:1902845
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101553],"is_not":false,"summary":null,"term":"GO:1902845"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic spindle elongation.","definition_xrefs":["PMID:23087209","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic spindle elongation","type":"exact"},{"name":"down regulation of spindle elongation during mitosis","type":"exact"},{"name":"down-regulation of mitotic spindle elongation","type":"exact"},{"name":"down-regulation of spindle elongation during mitosis","type":"exact"},{"name":"downregulation of mitotic spindle elongation","type":"exact"},{"name":"downregulation of spindle elongation during mitosis","type":"exact"},{"name":"inhibition of mitotic spindle elongation","type":"narrow"},{"name":"inhibition of spindle elongation during mitosis","type":"narrow"},{"name":"negative regulation of spindle elongation during mitosis","type":"exact"}],"termid":"GO:1902845","terms_by_termid":{"GO:1902845":null}}


id: PBO:0029416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_palmitoylation_during_meiosis","termid":"PBO:0029416"}


id: FYPO:0001004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells to resume growth normally upon exiting G0 phase.","definition_xrefs":["PomBase:mah","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"viable upon G0 to G1 transition","termid":"FYPO:0001004"}


id: PBO:0069936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1229, pseudogene","termid":"PBO:0069936"}


id: PBO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-fold modifier-specific protease (predicted)","termid":"PBO:0001593"}


id: PBO:0089961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain","termid":"PBO:0089961"}


id: GO:0032103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to external stimulus","synonyms":[{"name":"activation of response to external stimulus","type":"narrow"},{"name":"stimulation of response to external stimulus","type":"narrow"},{"name":"up regulation of response to external stimulus","type":"exact"},{"name":"up-regulation of response to external stimulus","type":"exact"},{"name":"upregulation of response to external stimulus","type":"exact"}],"termid":"GO:0032103"}


id: GO:0035649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that functions in transcription termination of RNA polymerase II transcribed non-coding RNAs. This complex interacts with the carboxy-terminal domain (CTD) of PolII and the terminator sequences in the nascent RNA transcript. In yeast this complex consists of Nrd1p, Nab3p, and Sen1p.","definition_xrefs":["PMID:16427013","GOC:jh","PMID:21084293","PMID:10655211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Nrd1 complex","termid":"GO:0035649"}


id: PBO:0076065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STPG2 antisense RNA 1","termid":"PBO:0076065"}


id: GO:0097448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A configuration of neuron spines found on ciliary ganglion neurons in the embryonic and adult brain consisting of patches of closely spaced spines lying flat against the soma.","definition_xrefs":["NIF_Subcellular:sao2128156969","PMID:10818137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine mat","termid":"GO:0097448"}


id: PBO:0005122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex non-SMC subunit Cnd2","termid":"PBO:0005122"}


id: MONDO:0030969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 68","secondary_identifiers":["OMIM:619934","UMLS:C5677008","MEDGEN:1802176"],"synonyms":[{"name":"MRD68","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 68","type":"exact"},{"name":"mental retardation, autosomal dominant 68","type":"exact"}],"termid":"MONDO:0030969","xrefs":{"Monarch":{"xref_id":"0030969"}}}


id: GO:0090432
data:
  {"annotated_genes":["SJAG_03909","SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104759,112555],"is_not":false,"summary":null,"term":"GO:0090432"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myristic acid + CoA = AMP + diphosphate + myristoyl-CoA.","definition_xrefs":["GOC:al","PMID:18071249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid-CoA ligase activity","termid":"GO:0004467"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"myristoyl-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"myristoyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0090432","terms_by_termid":{"GO:0090432":null}}


id: PBO:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"published","termid":"PBO:0000001"}


id: PBO:0049104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR160 pseudogene 1","termid":"PBO:0049104"}


id: PBO:0055151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2570","termid":"PBO:0055151"}


id: GO:0009049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a signal peptide from a protein precursor by an aspartic endopeptidase mechanism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartic-type signal peptidase activity (obsolete GO:0009049)","synonyms":[{"name":"aspartic-type signal peptidase activity","type":"exact"}],"termid":"GO:0009049"}


id: PBO:0035749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_telomere_during_vegetative_growth","termid":"PBO:0035749"}


id: PBO:0079436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 4","termid":"PBO:0079436"}


id: PBO:0038676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 2B","termid":"PBO:0038676"}


id: PBO:0068709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 90, pseudogene","termid":"PBO:0068709"}


id: MONDO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare histological variant of glioblastoma (WHO grade IV) with a predominance of bizarre, multinucleated giant cells, an occasionally abundant stromal reticulin network, and a high frequency of TP53 mutations. (WHO)","definition_xrefs":["NCIT:C4325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain glioblastoma","termid":"MONDO:0002501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"giant cell glioblastoma","secondary_identifiers":["UMLS:C0334588","GARD:20705","ICDO:9441/3","icd11.foundation:565094124","Orphanet:251579","DOID:3074","MEDGEN:83169"],"synonyms":[{"name":"Monstrocellular sarcoma","type":"exact"},{"name":"Monstrocellular sarcoma [obs]","type":"exact"}],"termid":"MONDO:0016682","xrefs":{"Monarch":{"xref_id":"0016682"}}}


id: PBO:0026775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_centromere_inner_repeat","termid":"PBO:0026775"}


id: MONDO:0010371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked recessive retinal disease characterized by fundus hypopigmentation, decrased visual acuity, nystagmus, astigmatism, progressive axial myopia, defective dark adaptation and protanopia.","definition_xrefs":["Orphanet:178333"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"CACNA1F-related retinopathy","termid":"MONDO:0700243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Aland island eye disease","secondary_identifiers":["GARD:10574","OMIM:300600","MESH:C562664","DOID:0050630","SCTID:266455006","MEDGEN:120643","UMLS:C0268505","ICD10CM:H35.5"],"synonyms":[{"name":"AIED","type":"exact"},{"name":"ALAND ISLAND eye disease","type":"related"},{"name":"Aland island eye disease","type":"exact"},{"name":"FORSIUS-Eriksson type ocular albinism","type":"exact"},{"name":"Forsius Eriksson type ocular albinism","type":"related"},{"name":"Forsius-Eriksson syndrome","type":"exact"},{"name":"Forsius-Eriksson type ocular albinism","type":"exact"},{"name":"Åland Islands eye disease","type":"related"}],"termid":"MONDO:0010371","xrefs":{"Monarch":{"xref_id":"0010371"}}}


id: GO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to initiate or regulate RNA polymerase III transcription.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription factor activity (obsolete GO:0003709)","synonyms":[{"name":"RNA polymerase III transcription factor activity","type":"exact"}],"termid":"GO:0003709"}


id: PBO:0076934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 2","termid":"PBO:0076934"}


id: PBO:0054692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2101","termid":"PBO:0054692"}


id: GO:0070455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"positive regulation of heme biosynthetic process","synonyms":[{"name":"activation of heme biosynthetic process","type":"narrow"},{"name":"positive regulation of haem biosynthetic process","type":"exact"},{"name":"positive regulation of heme anabolism","type":"exact"},{"name":"positive regulation of heme biosynthesis","type":"exact"},{"name":"positive regulation of heme formation","type":"exact"},{"name":"positive regulation of heme synthesis","type":"exact"},{"name":"stimulation of heme biosynthetic process","type":"narrow"},{"name":"up regulation of heme biosynthetic process","type":"exact"},{"name":"up-regulation of heme biosynthetic process","type":"exact"},{"name":"upregulation of heme biosynthetic process","type":"exact"}],"termid":"GO:0070455"}


id: GO:0071893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to nephric duct formation.","definition_xrefs":["GOC:mah","GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in nephric duct formation (obsolete GO:0071893)","synonyms":[{"name":"BMP signalling pathway involved in nephric duct formation","type":"exact"}],"termid":"GO:0071893"}


id: PBO:0043507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 2","termid":"PBO:0043507"}


id: PBO:0088437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, no evidence for translation on annotated strand","termid":"PBO:0088437"}


id: PBO:0031004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_dodecyl_sulfate","termid":"PBO:0031004"}


id: PATO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity toward an external stimulus which is lower than normal/average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitive toward","termid":"PATO:0000516"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased sensitivity toward","synonyms":[{"name":"decreased sensitivity","type":"exact"},{"name":"low sensitivity toward","type":"exact"}],"termid":"PATO:0001550"}


id: FYPO:0005179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) exposure during mitotic G1 phase is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to UV. The most common abnormality is for the cell cycle to progress as in the absence of UV.","definition_xrefs":["PomBase:mah","PMID:15498101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle delay following UV exposure during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ultraviolet light during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to UV during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005179"}


id: PBO:0079643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 16","termid":"PBO:0079643"}


id: GO:0031640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell killing","termid":"GO:0001906"},{"relation_name":"is_a","term_name":"disruption of cell in another organism","termid":"GO:0141061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing of cells of another organism","secondary_identifiers":["GO:0001908"],"synonyms":[{"name":"killing of cells of other organism","type":"exact"}],"termid":"GO:0031640"}


id: PBO:0055469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2902","termid":"PBO:0055469"}


id: PBO:0063922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 1","termid":"PBO:0063922"}


id: MONDO:0033562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies, impaired speech, and hypotonia","secondary_identifiers":["GARD:18528","OMIM:619005","UMLS:C5436585","MEDGEN:1776912"],"synonyms":[{"name":"NEDDISH","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES, IMPAIRED SPEECH, AND HYPOTONIA","type":"related"},{"name":"neurodevelopmental disorder with dysmorphic facies, impaired speech and hypotonia","type":"exact"}],"termid":"MONDO:0033562","xrefs":{"Monarch":{"xref_id":"0033562"}}}


id: GO:0033329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving O-glucosylated derivatives of kaempferol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kaempferol O-glucoside metabolic process","synonyms":[{"name":"kaempferol O-glucoside metabolism","type":"exact"}],"termid":"GO:0033329"}


id: RO:0002588
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_organization_of","termid":"RO:0002592"},{"relation_name":"is_a","term_name":"results_in_formation_of","termid":"_global:results_in_formation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_assembly_of","termid":"RO:0002588"}


id: PBO:0053012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 2","termid":"PBO:0053012"}


id: GO:0008041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein of fat body (sensu Insecta) (obsolete GO:0008041)","synonyms":[{"name":"storage protein of fat body (sensu Insecta)","type":"exact"}],"termid":"GO:0008041"}


id: PBO:0080141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasorin","termid":"PBO:0080141"}


id: PBO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 33","termid":"PBO:0072156"}


id: PBO:0063429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 3","termid":"PBO:0063429"}


id: PBO:0051340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-18 (pseudogene)","termid":"PBO:0051340"}


id: PBO:0028545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_glucose_starvation","termid":"PBO:0028545"}


id: FYPO:0006593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of spindle microtubules from the spindle pole body (SPB) occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah","PMID:19942852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic microtubule nucleation","termid":"FYPO:0006336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule nucleation from spindle pole body","synonyms":[{"name":"decreased microtubule nucleation from spindle pole body during mitotic cell cycle","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation by spindle pole body","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from SPB","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during mitotic M phase","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during vegetative growth","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic SPB","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic spindle pole body","type":"exact"},{"name":"reduced mitotic spindle microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0006593"}


id: MONDO:0014986
data:
  {"annotated_genes":["SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86223],"is_not":false,"summary":null,"term":"MONDO:0014986"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the RAD51 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0005046","MONDO:0021190","MONDO:0002280"],"is_obsolete":false,"name":"Fanconi anemia complementation group R","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4284093","GARD:16214","OMIM:617244","MEDGEN:924579","DOID:0111090"],"synonyms":[{"name":"FANCR","type":"exact"},{"name":"Fanconi Anemia, complementation group R","type":"exact"},{"name":"Fanconi Anemia, complementation group type R","type":"exact"},{"name":"Fanconi anaemia caused by mutation in RAD51","type":"exact"},{"name":"Fanconi anaemia complementation group type R","type":"exact"},{"name":"Fanconi anemia caused by mutation in RAD51","type":"exact"},{"name":"Fanconi anemia complementation group type R","type":"exact"},{"name":"Fanconi anemia, complementation GROUP R","type":"related"},{"name":"RAD51 Fanconi anaemia","type":"exact"},{"name":"RAD51 Fanconi anemia","type":"exact"}],"termid":"MONDO:0014986","terms_by_termid":{"MONDO:0014986":null},"xrefs":{"Monarch":{"xref_id":"0014986"}}}


id: GO:0110119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of very-low-density lipoprotein particle clearance.","definition_xrefs":["GOC:BHF_miRNA","PMID:25510864","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle clearance","termid":"GO:0010915"},{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle clearance","termid":"GO:0110119"}


id: GO:0050765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phagocytosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"negatively_regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of phagocytosis","synonyms":[{"name":"down regulation of phagocytosis","type":"exact"},{"name":"down-regulation of phagocytosis","type":"exact"},{"name":"downregulation of phagocytosis","type":"exact"},{"name":"inhibition of phagocytosis","type":"narrow"}],"termid":"GO:0050765"}


id: FYPO:0003461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular trehalose level","termid":"FYPO:0001449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular trehalose level during cellular response to salt stress","synonyms":[{"name":"normal cellular trehalose accumulation during cellular response to salt stress","type":"related"},{"name":"normal cellular trehalose level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0003461"}


id: GO:0039543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The post-transcriptional removal by a virus of the 5' triphosphate group of their viral RNA, thereby preventing host RIG-I from recognizing viral RNA in the host cell. The intracellular pattern recognition receptor RIG-I (also known as DDX58) recognizes viral RNAs containing 5' triphosphates; removal by the virus of the 5'-terminal triphosphate group from their genome protects the viral RNA from RIG-recognition.","definition_xrefs":["VZ:856","PMID:18446221"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I activity by viral RNA 5' processing (obsolete GO:0039543)","synonyms":[{"name":"suppression by virus of host RIG-I activity by inhibition of RNA binding","type":"narrow"}],"termid":"GO:0039543"}


id: PBO:0011092
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhytoCheletin Synthase","termid":"PBO:0011092"}


id: GO:0051118
data:
  {"annotated_genes":["SJAG_03444","SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88303,110460],"is_not":false,"summary":null,"term":"GO:0051118"}]},"cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->3)-alpha-D-glucosidic linkages in isolichenin, pseudonigeran and nigeran.","definition_xrefs":["EC:3.2.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02718":null,"SJAG_03444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.59-RXN"],"synonyms":[{"name":"1,3(1,3;1,4)-alpha-D-glucan 3-glucanohydrolase activity","type":"related"},{"name":"cariogenanase activity","type":"related"},{"name":"cariogenase activity","type":"related"},{"name":"endo-(1->3)-alpha-glucanase activity","type":"related"},{"name":"endo-1,3-alpha-D-glucanase activity","type":"related"},{"name":"endo-1,3-alpha-glucanase activity","type":"related"},{"name":"mutanase activity","type":"related"}],"termid":"GO:0051118","terms_by_termid":{"GO:0051118":null}}


id: MONDO:0008523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blau syndrome (BS) is a rare systemic inflammatory disease characterized by early onset granulomatous arthritis, uveitis and skin rash. BS now refers to both the familial and sporadic (formerly early-onset sarcoidosis) form of the same disease. The proposed term pediatric granulomatous arthritis is currently questioned since it fails to represent the systemic nature of the disease.","definition_xrefs":["Orphanet:90340"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"excluded_subClassOf","term_name":"obsolete other genetic dermis disorder (obsolete MONDO:0018798)","termid":"MONDO:0018798"},{"relation_name":"excluded_subClassOf","term_name":"obsolete other dermis disorder (obsolete MONDO:0019295)","termid":"MONDO:0019295"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Blau syndrome","secondary_identifiers":["OMIM:186580","GARD:304","OMIM:609464","MedDRA:10071755","ICD9:692.9","MEDGEN:1684759","NCIT:C116794","Orphanet:90341","UMLS:C5201146","NANDO:1200476","ICD9:714.89","MESH:C538157","DOID:0050678","icd11.foundation:382488319","NANDO:2200434","SCTID:699861000"],"synonyms":[{"name":"ACUG","type":"related"},{"name":"BLAUS","type":"exact"},{"name":"Blau syndrome","type":"exact"},{"name":"EOS","type":"exact"},{"name":"Jabs syndrome","type":"exact"},{"name":"arthrocutaneouveal granulomatosis","type":"exact"},{"name":"early-onset sarcoidosis","type":"exact"},{"name":"granulomatosis, familial juvenile systemic","type":"exact"},{"name":"granulomatosis, familial, Blau type","type":"exact"},{"name":"granulomatous inflammatory arthritis, dermatitis, and uveitis, familial","type":"exact"},{"name":"paediatric granulomatous arthritis","type":"exact"},{"name":"pediatric granulomatous arthritis","type":"exact"},{"name":"sarcoidosis, early-onset","type":"exact"},{"name":"synovitis granulomatous with uveitis and cranial neuropathies","type":"related"},{"name":"synovitis, granulomatous, with uveitis and cranial neuropathies","type":"related"}],"termid":"MONDO:0008523","xrefs":{"Monarch":{"xref_id":"0008523"}}}


id: PBO:0031512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mating_efficiency","termid":"PBO:0031512"}


id: FYPO:0007837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at subtelomeric regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:31837996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased nucleosome occupancy at subtelomere","synonyms":[{"name":"decreased nucleosome occupancy at subtelomere during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at subtelomere during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy at subtelomere","type":"exact"}],"termid":"FYPO:0007837"}


id: PBO:0057306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516a-1","termid":"PBO:0057306"}


id: PBO:0055109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2527","termid":"PBO:0055109"}


id: GO:0032104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a response to an extracellular stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of response to extracellular stimulus (obsolete GO:0032104)","termid":"GO:0032104"}


id: MONDO:0001962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"abnormality of glucagon secretion","secondary_identifiers":["MEDGEN:509540","SCTID:11178005","ICD9:251.4","UMLS:C0154191","DOID:14427"],"synonyms":[{"name":"glucagon secretion abnormality","type":"exact"}],"termid":"MONDO:0001962","xrefs":{"Monarch":{"xref_id":"0001962"}}}


id: PBO:0017566
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anencephaly","termid":"PBO:0017566"}


id: GO:0000381
data:
  {"annotated_genes":["SJAG_04782"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94573],"is_not":false,"summary":null,"term":"GO:0000381"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"regulates","term_name":"alternative mRNA splicing, via spliceosome","termid":"GO:0000380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04782":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of alternative mRNA splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of alternative nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"splice site selection","type":"broad"}],"termid":"GO:0000381","terms_by_termid":{"GO:0000381":null}}


id: PBO:0002107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)-specific ribonuclease complex subunit Pan3 (predicted)","termid":"PBO:0002107"}


id: PBO:0004252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxyl methyl esterase (predicted)","termid":"PBO:0004252"}


id: PBO:0058038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4259","termid":"PBO:0058038"}


id: MONDO:0019379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete st. Louis encephalitis (obsolete MONDO:0019379)","termid":"MONDO:0019379","xrefs":{"Monarch":{"xref_id":"0019379"}}}


id: GO:0062224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of somatic muscle development","termid":"GO:0062223"},{"relation_name":"positively_regulates","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic muscle development","termid":"GO:0062224"}


id: MONDO:0005471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurally mediated hypotension is a sudden drop in blood pressure while an individual stands up. It occurs when there is an abnormal reflex interaction between the heart and the brain, both of which usually are structurally normal","definition_xrefs":["EFO:0005254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotensive disorder","termid":"MONDO:0005468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurally mediated hypotension","termid":"MONDO:0005471","xrefs":{"Monarch":{"xref_id":"0005471"}}}


id: PBO:0065504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraspeckle component 1 pseudogene 1","termid":"PBO:0065504"}


id: MOD:00071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N,N,N-trimethyl-L-alanine.","definition_xrefs":["PubMed:7715456","RESID:AA0062","PubMed:332162","PubMed:12590383","PubMed:6778808","PubMed:3979397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated alanine","termid":"MOD:01461"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-alanine","synonyms":[{"name":"(1S)-1-carboxy-N,N,N-trimethylethanaminium","type":"exact"},{"name":"(1S)-1-carboxy-N,N,N-trimethylethanazanium","type":"exact"},{"name":"(2S)-2-(trimethylammonio)propanoic acid","type":"exact"},{"name":"MOD_RES N,N,N-trimethylalanine","type":"exact"},{"name":"N,N,N-trimethyl-L-alanine","type":"exact"},{"name":"N,N,N-trimethylalanine cation","type":"exact"},{"name":"N,N,N-trimethylalaninium","type":"exact"},{"name":"N,N,N-trimethylated L-alanine","type":"exact"},{"name":"N2Me3+Ala","type":"exact"},{"name":"NMe3Ala","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00071"}


id: PBO:0028567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_homologous_chromosome_biorientation","termid":"PBO:0028567"}


id: GO:0051914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chemical substance increases synaptic plasticity, the ability of synapses to change as circumstances require.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic plasticity","termid":"GO:0031915"},{"relation_name":"is_a","term_name":"regulation of synaptic plasticity by chemical substance","termid":"GO:0051913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic plasticity by chemical substance","synonyms":[{"name":"activation of synaptic plasticity by chemical substance","type":"narrow"},{"name":"positive regulation of synaptic plasticity by drug","type":"narrow"},{"name":"stimulation of synaptic plasticity by chemical substance","type":"narrow"},{"name":"up regulation of synaptic plasticity by chemical substance","type":"exact"},{"name":"up-regulation of synaptic plasticity by chemical substance","type":"exact"},{"name":"upregulation of synaptic plasticity by chemical substance","type":"exact"}],"termid":"GO:0051914"}


id: GO:0009567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fertilization where one of the two sperm nuclei from the pollen tube fuses with the egg nucleus to form a 2n zygote, and the other fuses with the two polar nuclei to form the 3n primary endosperm nucleus and then develops into the endosperm. The ploidy level of the 2n zygote and 3n primary endosperm nucleus is determined by the ploidy level of the parents involved. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double fertilization forming a zygote and endosperm","synonyms":[{"name":"double fertilization","type":"exact"}],"termid":"GO:0009567"}


id: GO:0034311
data:
  {"annotated_genes":["SJAG_02706","SJAG_01057","SJAG_02429","SJAG_00880","SJAG_03098","SJAG_02305","SJAG_03275","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91980,105148,96855,108867,104700,96098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[89509,107676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a diol, a compound that contains two hydroxy groups, generally assumed to be, but not necessarily, alcoholic.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_03098":null,"SJAG_03275":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dihydric alcohol metabolic process","type":"related"},{"name":"diol metabolism","type":"exact"}],"termid":"GO:0034311","terms_by_termid":{"GO:0006729":null,"GO:0046512":null}}


id: GO:1903133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tube lumen cavitation.","definition_xrefs":["GO_REF:0000058","PMID:22898778","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of tube lumen cavitation","termid":"GO:1903132"},{"relation_name":"negatively_regulates","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tube lumen cavitation","synonyms":[{"name":"inhibition of tube lumen cavitation","type":"narrow"}],"termid":"GO:1903133"}


id: FYPO:0001360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"},{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased amino acid import during vegetative growth","synonyms":[{"name":"decreased amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased amino acid import during mitotic cell cycle","type":"related"},{"name":"decreased amino acid import into cell during vegetative growth","type":"exact"},{"name":"decreased amino acid uptake during vegetative growth","type":"exact"},{"name":"reduced amino acid import during vegetative growth","type":"exact"}],"termid":"FYPO:0001360"}


id: GO:0038085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor.","definition_xrefs":["PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"vascular endothelial growth factor binding","synonyms":[{"name":"VEGF binding","type":"exact"}],"termid":"GO:0038085"}


id: GO:1902338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["PMID:12202035","GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"down regulation of apoptosis involved in development","type":"related"},{"name":"down regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"down regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"down regulation of morphogenetic apoptosis","type":"related"},{"name":"down-regulation of apoptosis involved in development","type":"related"},{"name":"down-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"down-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"down-regulation of morphogenetic apoptosis","type":"related"},{"name":"downregulation of apoptosis involved in development","type":"related"},{"name":"downregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"downregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"downregulation of morphogenetic apoptosis","type":"related"},{"name":"inhibition of apoptosis involved in development","type":"related"},{"name":"inhibition of apoptosis involved in morphogenesis","type":"narrow"},{"name":"inhibition of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"inhibition of morphogenetic apoptosis","type":"related"},{"name":"negative regulation of apoptosis involved in development","type":"related"},{"name":"negative regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"negative regulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902338"}


id: PBO:0031046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_anisomycin","termid":"PBO:0031046"}


id: GO:0060363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which any suture between cranial bones is generated and organized.","definition_xrefs":["GOC:sl","GOC:dph","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial suture morphogenesis","termid":"GO:0060363"}


id: PR:O94364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wpl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wings apart-like protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.17c","synonyms":[{"name":"Spom972h-wpl1","type":"exact"}],"termid":"PR:O94364"}


id: PBO:0061669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 2","termid":"PBO:0061669"}


id: PBO:0056155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage enriched lincRNA repressor of IFN-gamma signaling","termid":"PBO:0056155"}


id: PATO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's separation of normally joined parts, such as the separation of adjacent bones without fracture or of certain abdominal muscles during pregnancy.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"separated from","termid":"PATO:0001505"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diastatic","termid":"PATO:0001506"}


id: PBO:0065158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 8","termid":"PBO:0065158"}


id: PATO:0001183
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001183 absolute response value (obsolete PATO:0001183)","termid":"PATO:0001183"}


id: PBO:0050040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 8 (pseudogene)","termid":"PBO:0050040"}


id: GO:0000025
data:
  {"annotated_genes":["SJAG_02131","SJAG_03824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100782,100783],"is_not":false,"summary":null,"term":"GO:0000025"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the disaccharide maltose (4-O-alpha-D-glucopyranosyl-D-glucopyranose).","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose metabolic process","termid":"GO:0000023"},{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"maltose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:MALTOSECAT-PWY"],"synonyms":[{"name":"malt sugar catabolic process","type":"exact"},{"name":"malt sugar catabolism","type":"exact"},{"name":"maltose breakdown","type":"exact"},{"name":"maltose degradation","type":"exact"},{"name":"maltose hydrolysis","type":"narrow"}],"termid":"GO:0000025","terms_by_termid":{"GO:0000025":null}}


id: PBO:0026942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiotic_cell_cycle","termid":"PBO:0026942"}


id: GO:0009751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salicylic acid","synonyms":[{"name":"response to salicylate","type":"exact"},{"name":"response to salicylic acid stimulus","type":"exact"}],"termid":"GO:0009751"}


id: PBO:0075794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 12","termid":"PBO:0075794"}


id: GO:0035217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the labial imaginal disc over time, from its initial formation through to its metamorphosis to form adult structures including parts of the proboscis.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labial disc development","termid":"GO:0035217"}


id: GO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of dendritic spine development","termid":"GO:0060998"},{"relation_name":"negatively_regulates","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic spine development","termid":"GO:0061000"}


id: PR:000027526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:11937031","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drc1/UnMod","pombase_gene_id":"SPAC6B12.11","synonyms":[{"name":"DNA replication regulator drc1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PomBase_original_PRO_term_name: DNA replication regulator sld2 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-SLD2/UnMod","type":"exact"},{"name":"drc1/UnMod","type":"exact"}],"termid":"PR:000027526"}


id: GO:1901411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process from glutamate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glutamate","termid":"GO:1901410"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"is_a","term_name":"negative regulation of glutamate metabolic process","termid":"GO:2000212"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process from glutamate","termid":"GO:0033526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0033013","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"down regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process from glutamate","type":"narrow"},{"name":"inhibition of tetrapyrrole formation from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:1901411"}


id: FYPO:0001073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of myo-inositol into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal myo-inositol import","synonyms":[{"name":"abnormal myo-inositol import across plasma membrane","type":"exact"},{"name":"abnormal myo-inositol import during mitotic cell cycle","type":"related"},{"name":"abnormal myo-inositol import during vegetative growth","type":"exact"},{"name":"abnormal myo-inositol import into cell","type":"exact"},{"name":"abnormal myo-inositol uptake","type":"exact"}],"termid":"FYPO:0001073"}


id: PBO:0027670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_assembly_checkpoint_override","termid":"PBO:0027670"}


id: SO:0000396
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U6_snRNA"],"synonyms":[{"name":"U6 small nuclear RNA","type":"exact"},{"name":"U6 snRNA","type":"exact"},{"name":"small nuclear RNA U6","type":"exact"},{"name":"snRNA U6","type":"exact"}],"termid":"SO:0000396"}


id: PBO:0004267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp9","termid":"PBO:0004267"}


id: PBO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; YGR079W is not an essential gene","termid":"PBO:0086029"}


id: MONDO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete extraosseous Ewings sarcoma-primitive neuroepithelial tumor (obsolete MONDO:0003230)","termid":"MONDO:0003230","xrefs":{"Monarch":{"xref_id":"0003230"}}}


id: GO:1902559
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"}]},"cv_name":"biological_process","definition":"The process in which 3'-phospho-5'-adenylyl sulfate is transported across a membrane.","definition_xrefs":["PMID:24296033","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-phosphoadenosine 5'-phosphosulfate transport","termid":"GO:0046963"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"3'-phospho-5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate transmembrane transport","type":"exact"}],"termid":"GO:1902559","terms_by_termid":{"GO:1990554":null}}


id: GO:0043265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Granule free cytoplasm, lying immediately below the plasma membrane.","definition_xrefs":["PMID:12211103","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ectoplasm (obsolete GO:0043265)","termid":"GO:0043265"}


id: PBO:0077240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMCO1 antisense RNA 1","termid":"PBO:0077240"}


id: MONDO:0014864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypermanganesemia with dystonia in which the cause of the disease is a mutation in the SLC39A14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypermanganesemia with dystonia","termid":"MONDO:0000214"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of manganese transport","termid":"MONDO:0017766"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"hypermanganesemia with dystonia 2","secondary_identifiers":["Orphanet:521406","GARD:17958","DOID:0080537","MEDGEN:934732","OMIM:617013","SCTID:768554008","UMLS:C4310765"],"synonyms":[{"name":"HMNDYT2","type":"exact"},{"name":"SLC39A14 hypermanganesemia with dystonia","type":"exact"},{"name":"hypermanganesemia with dystonia 2","type":"exact"},{"name":"hypermanganesemia with dystonia 2; HMNDYT2","type":"exact"},{"name":"hypermanganesemia with dystonia caused by mutation in SLC39A14","type":"exact"},{"name":"hypermanganesemia with dystonia type 2","type":"exact"}],"termid":"MONDO:0014864","xrefs":{"Monarch":{"xref_id":"0014864"}}}


id: MONDO:0100024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the onset of seizures between 3 and 20 months of age (peak 6 months). Seizures may be frequent at onset but usually remit within 1 year from the onset. In untreated cases there can be isolated or brief clusters of seizures within the period from onset to remission. A minority of individuals may have epilepsy in later life. Some patients (with PRRT2 mutations) may develop paroxysmal kinesiogenic dyskinesia in later life.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neonatal/infantile epilepsy syndrome","termid":"MONDO:0100022"},{"relation_name":"is_a","term_name":"infantile-onset epilepsy","termid":"MONDO:0100207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited familial infantile epilepsy","synonyms":[{"name":"SeLFIE","type":"exact"},{"name":"self-limited familial and non-familial infantile seizures","type":"exact"}],"termid":"MONDO:0100024","xrefs":{"Monarch":{"xref_id":"0100024"}}}


id: PBO:0068571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 22, pseudogene","termid":"PBO:0068571"}


id: PBO:0057107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 197","termid":"PBO:0057107"}


id: GO:2000082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-ascorbic acid biosynthetic process.","definition_xrefs":["PMID:19395407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"regulation of L-ascorbic acid biosynthetic process","synonyms":[{"name":"regulation of L-ascorbic acid anabolism","type":"exact"},{"name":"regulation of L-ascorbic acid biosynthesis","type":"exact"},{"name":"regulation of L-ascorbic acid formation","type":"exact"},{"name":"regulation of L-ascorbic acid synthesis","type":"exact"},{"name":"regulation of ascorbate biosynthesis","type":"exact"},{"name":"regulation of ascorbate biosynthetic process","type":"exact"},{"name":"regulation of vitamin C biosynthesis","type":"exact"},{"name":"regulation of vitamin C biosynthetic process","type":"exact"}],"termid":"GO:2000082"}


id: PBO:0051367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-7","termid":"PBO:0051367"}


id: GO:0000247
data:
  {"annotated_genes":["SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91800],"is_not":false,"summary":null,"term":"GO:0000247"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: fecosterol = episterol.","definition_xrefs":["PMID:8988026","RHEA:33435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"C-8 sterol isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3O-203"],"synonyms":[{"name":"delta-8-delta-7 sterol isomerase activity","type":"exact"}],"termid":"GO:0000247","terms_by_termid":{"GO:0000247":null}}


id: GO:0015645
data:
  {"annotated_genes":["SJAG_03471","SJAG_03909","SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[104759,112555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[104760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[104761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of a fatty acid to an acceptor, coupled to the hydrolysis of ATP.","definition_xrefs":["GOC:cjk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00947":null,"SJAG_03471":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"fatty acid ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid CoA ligase activity","type":"related"},{"name":"fatty acyl-coenzyme A synthetase activity","type":"related"},{"name":"fatty-acid ligase activity","type":"exact"}],"termid":"GO:0015645","terms_by_termid":{"GO:0031956":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: MOD:00470
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS-LC-Biotin","synonyms":[{"name":"NHS-LC-Biotin","type":"related"}],"termid":"MOD:00470"}


id: PR:O42651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.11c","synonyms":[{"name":"Spom972h-atg17","type":"exact"}],"termid":"PR:O42651"}


id: PBO:0036163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_domain_during_vegetative_growth","termid":"PBO:0036163"}


id: MONDO:0019222
data:
  {"annotated_genes":["SJAG_01880","SJAG_01070","SJAG_03712","SJAG_03671","SJAG_00582","SJAG_04042","SJAG_03556","SJAG_03659","SJAG_04459","SJAG_04425","SJAG_01199","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[84552,84553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009352"},{"annotations":[84266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009058"},{"annotations":[84497,84496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[86138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"},{"annotations":[85198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009607"},{"annotations":[84474,84473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[85085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[85905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sulfur amino acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"},{"relation_name":"is_a","term_name":"sulfur metabolism disease","termid":"MONDO:0056803"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00582":null,"SJAG_01070":null,"SJAG_01199":null,"SJAG_01466":null,"SJAG_01880":null,"SJAG_03556":null,"SJAG_03659":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of methionine cycle and sulfur amino acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:67872354","MEDGEN:1842381","GARD:18953","SCTID:28882002","ICD9:270.4","Orphanet:79173","UMLS:C5680126"],"synonyms":[{"name":"cytosolic methyl group transfer or sulfur amino acid metabolism disorder","type":"exact"},{"name":"cytosolic methyl group transfer or sulphur amino acid metabolism disorder","type":"exact"},{"name":"disorder of methionine cycle and sulfur amino acid metabolism","type":"related"},{"name":"disorder of methionine cycle and sulphur amino acid metabolism","type":"related"},{"name":"inborn error of sulfur amino acid metabolic process","type":"exact"},{"name":"inborn error of sulphur amino acid metabolic process","type":"exact"},{"name":"inborn sulfur amino acid metabolic process disorder","type":"exact"},{"name":"inborn sulphur amino acid metabolic process disorder","type":"exact"},{"name":"rare inborn error of sulfur amino acid metabolic process","type":"exact"},{"name":"rare inborn error of sulphur amino acid metabolic process","type":"exact"}],"termid":"MONDO:0019222","terms_by_termid":{"MONDO:0009058":null,"MONDO:0009352":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009607":null,"MONDO:0009609":null,"MONDO:0010184":null,"MONDO:0013404":null,"MONDO:0100255":null},"xrefs":{"Monarch":{"xref_id":"0019222"}}}


id: PBO:0051151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30-5","termid":"PBO:0051151"}


id: PBO:0086682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by homology","termid":"PBO:0086682"}


id: FYPO:0007703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex does not occur when the cell is subject to glucose starvation.","definition_xrefs":["PMID:26443240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to lateral cell cortex during glucose starvation","synonyms":[{"name":"abolished protein localisation to lateral cell cortex during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell side during glucose starvation","type":"related"},{"name":"abolished protein localization to lateral cell cortex during cellular response to glucose starvation","type":"exact"},{"name":"abolished protein localization to lateral cell cortex during glucose depletion","type":"exact"},{"name":"abolished protein localization to lateral cell cortex during glucose deprivation","type":"exact"},{"name":"abolished protein localization to lateral cortex during glucose starvation","type":"exact"},{"name":"protein localization to lateral cell cortex during glucose starvation abolished","type":"exact"}],"termid":"FYPO:0007703"}


id: PBO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 128","termid":"PBO:0075078"}


id: PBO:0066923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 225","termid":"PBO:0066923"}


id: PBO:0004540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog","termid":"PBO:0004540"}


id: PR:Q09818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mot2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription C16C9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.04c","synonyms":[{"name":"Spom972h-mot2","type":"exact"}],"termid":"PR:Q09818"}


id: PATO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's having thin, tail-like projections extending outwards from the cell body.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Ciliated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliatedness","termid":"PATO:0001408"}


id: MONDO:0017049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Hypomyelination neuropathy-arthrogryposis syndrome is a rare, genetic, limb malformation syndrome characterized by multiple congenital distal joint contractures (incl. talipes equinovarus and both proximal and distal interphalangeal joint contractures of the hands) and very severe motor paralysis at birth (i.e. lack of swallowing, autonomous respiratory function and deep tendon reflexes), leading to death within first 3 months of life. Fetal hypo- or akinesia, late-onset polyhydramnios and dramatically reduced, or absent, motor nerve conduction velocities (<10 m/s) are frequently associated. Nerve ultrastructural morphology shows severe abnormalities of the nodes of Ranvier and myelinated axons.","definition_xrefs":["Orphanet:2680"],"gene_count":0,"genotype_count":0,"name":"obsolete hypomyelination neuropathy-arthrogryposis syndrome (obsolete MONDO:0017049)","synonyms":[{"name":"Boylan-dew syndrome","type":"exact"}],"termid":"MONDO:0017049","xrefs":{"Monarch":{"xref_id":"0017049"}}}


id: MONDO:1012278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, chicken","secondary_identifiers":["OMIA:001016-9031"],"termid":"MONDO:1012278","xrefs":{"Monarch":{"xref_id":"1012278"}}}


id: MONDO:0017508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of fingers excluding thumb, bilateral (obsolete MONDO:0017508)","secondary_identifiers":["Orphanet:295114"],"synonyms":[{"name":"Adactyly of hand, bilateral","type":"exact"},{"name":"digits 2-5 hypodactyly, bilateral","type":"exact"},{"name":"digits 2-5 oligodactyly, bilateral","type":"exact"}],"termid":"MONDO:0017508","xrefs":{"Monarch":{"xref_id":"0017508"}}}


id: MOD:01079
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-[(acetylamino)methyl]-L-cysteine.","definition_xrefs":["DeltaMass:218","PubMed:8572278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(acetylamino)methyl-L-cysteine","synonyms":[{"name":"Acetamidomethyl Cystenyl","type":"exact"},{"name":"Acm-Cys","type":"exact"},{"name":"N-(hydroxymethyl)acetamide derivatized L-cysteine","type":"exact"},{"name":"S-(acetamido)methyl-L-cysteine","type":"exact"}],"termid":"MOD:01079"}


id: GO:0099124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dopamine from an axon.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:21576241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine secretion","termid":"GO:0014046"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"axonal dopamine secretion","synonyms":[{"name":"axonal DA release","type":"exact"},{"name":"axonal dopamine release","type":"exact"}],"termid":"GO:0099124"}


id: MONDO:0858956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system benign neoplasm that is characterized by the presence of clear glial neoplastic cells reminiscent of oligodendroglioma.","definition_xrefs":["DOID:0081302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse leptomeningeal glioneuronal tumor","secondary_identifiers":["UMLS:C4329735","MEDGEN:1391318"],"termid":"MONDO:0858956","xrefs":{"Monarch":{"xref_id":"0858956"}}}


id: PBO:0083907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin-linked sulfhydryl oxidase of the mitochondrial IMS; N-terminus is an intrinsically disordered domain that in the cytosol helps target Erv1p to mitochondria, and in the intermembrane space oxidizes Mia40p as part of a disulfide relay system that promotes intermembrane space retention of imported proteins; functional ortholog of human GFER (ALR); human GFER carrying N-terminal 21 amino acids of Erv1p functionally complements the lethality of the erv1 null mutation","termid":"PBO:0083907"}


id: _global:results_in_acquisition_of_features_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship that links a specified entity with the process that results in an unspecified entity acquiring the features and characteristics of the specified entity","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_changes_to_anatomical_or_cellular_structure","termid":"_global:results_in_changes_to_anatomical_or_cellular_structure"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_acquisition_of_features_of","secondary_identifiers":["GOREL:0001014","RO:0002315"],"synonyms":[{"name":"results in differentiation of","type":"exact"}],"termid":"_global:results_in_acquisition_of_features_of"}


id: PBO:0082603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coactivator, regulates transcription of ribosomal protein (RP) genes; recruited to RP gene promoters during optimal growth conditions via Fhl1p; subunit of CURI, a complex that coordinates RP production and pre-rRNA processing; regulated by acetylation and phosphorylation at different growth states via TORC1 signaling; IFH1 has a paralog, CRF1, that arose from the whole genome duplication","termid":"PBO:0082603"}


id: GO:0120029
data:
  {"annotated_genes":["SJAG_01669","SJAG_01129","SJAG_01541","SJAG_04258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86908,86909,95933,112901],"is_not":false,"summary":null,"term":"GO:0120029"}]},"cv_name":"biological_process","definition":"The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:mah","PMID:9762918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"},{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01129":null,"SJAG_01541":null,"SJAG_01669":null,"SJAG_04258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"proton export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen ion export across plasma membrane","type":"exact"},{"name":"hydrogen ion export from cell","type":"broad"},{"name":"proton export from cell","type":"broad"}],"termid":"GO:0120029","terms_by_termid":{"GO:0120029":null}}


id: MONDO:0008642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"VACTERL/VATER is an association of congenital malformations typically characterized by the presence of at least three of the following: vertebral defects, anal atresia, cardiac defects, tracheo-esophageal fistula, renal anomalies, and limb abnormalities.","definition_xrefs":["Orphanet:887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VACTERL/vater association","secondary_identifiers":["SCTID:27742002","NORD:1818","MedDRA:10053665","UMLS:C4225671","icd11.foundation:1452617987","MedDRA:10066022","MEDGEN:902479","NANDO:1200657","NCIT:C99105","NANDO:2200983","ICD9:759.89","DOID:14679","OMIM:192350","GARD:5443"],"synonyms":[{"name":"VACTERL Association","type":"exact"},{"name":"VACTERL association","type":"exact"},{"name":"VATER association","type":"exact"},{"name":"VATER syndrome","type":"related"},{"name":"VATER/VACTERL association","type":"related"},{"name":"vertebral abnormalities, anal atresia, Cardiac abnormalities, tracheo-esophageal fistula, renal anomalies, limb defects syndrome","type":"exact"}],"termid":"MONDO:0008642","xrefs":{"Monarch":{"xref_id":"0008642"}}}


id: PBO:0005252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cinnamoyl-CoA reductase pseudogene","termid":"PBO:0005252"}


id: GO:0018701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: organohalide + 2 H+ + 2 e- = R-H + HCl. Reactants include chlorohydroquinone (forms hydroquinone) and 2,5-dichlorohydroquinone (forms chlorohydroquinone).","definition_xrefs":["UM-BBD_enzymeID:e0366"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,5-dichlorohydroquinone reductive dehalogenase activity (obsolete GO:0018701)","termid":"GO:0018701"}


id: PBO:0056968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 24-2","termid":"PBO:0056968"}


id: MONDO:0009214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCD2 gene. This gene is involved in the repair of DNA double-strand breaks, both by homologous recombination and single-strand annealing.","definition_xrefs":["NCIT:C125706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0002280","MONDO:0005066","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Fanconi anemia complementation group D2","secondary_identifiers":["OMIM:227646","DOID:0111083","GARD:15169","MEDGEN:463627","UMLS:C3160738"],"synonyms":[{"name":"FA4","type":"exact"},{"name":"FAD2","type":"exact"},{"name":"FANCD2","type":"exact"},{"name":"Fad2","type":"related"},{"name":"Fanconi Anemia, complementation group D","type":"related"},{"name":"Fanconi anemia complementation group D2","type":"exact"},{"name":"Fanconi anemia, complementation group D2","type":"related"},{"name":"Fanconi pancytopenia type 4","type":"exact"},{"name":"Fanconi pancytopenia, type 4","type":"related"}],"termid":"MONDO:0009214","xrefs":{"Monarch":{"xref_id":"0009214"}}}


id: GO:0072737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diamide (N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diamide","synonyms":[{"name":"response to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"}],"termid":"GO:0072737"}


id: PBO:0062485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 1 pseudogene","termid":"PBO:0062485"}


id: FYPO:0007157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"abnormal histone binding","termid":"FYPO:0007157"}


id: MONDO:0007322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant chondrodysplasia punctata","termid":"MONDO:0007321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"chondrodysplasia punctata, tibial-metacarpal type","secondary_identifiers":["UMLS:C0432224","GARD:16715","OMIM:118651","MEDGEN:98147","SCTID:254083002","ICD9:756.59","MESH:C562961","NANDO:2201359","icd11.foundation:1513713461","Orphanet:79346"],"synonyms":[{"name":"chondrodysplasia punctata, Mt type","type":"related"},{"name":"chondrodysplasia punctata, tibia-metacarpal type","type":"related"}],"termid":"MONDO:0007322","xrefs":{"Monarch":{"xref_id":"0007322"}}}


id: PBO:0080929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 7","termid":"PBO:0080929"}


id: PR:O60097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt8 gene.","definition_xrefs":["UniProtKB:O60097","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor spt8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.17c","synonyms":[{"name":"Spom972h-spt8","type":"exact"}],"termid":"PR:O60097"}


id: GO:0140272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex from a different species, for example a pathogen molecule binding to a host protein.","definition_xrefs":["PMID:28861068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"exogenous protein binding","termid":"GO:0140272"}


id: GO:0008074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses guanylate cyclase activity and is not bound to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"guanylate cyclase complex, soluble","termid":"GO:0008074"}


id: PBO:0031115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phenotype","termid":"PBO:0031115"}


id: MONDO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wolfram syndrome (WS) also known as DIDMOAD, is a neurodegenerative disorder characterized by type I diabetes mellitus (DM), diabetes insipidus (DI), sensorineural deafness (D), bilateral optical atrophy (OA) and neurological signs. Other related problems are urinary tract atony, ataxia, peripheral neuropathy, psychiatric disorders and/or seizures. 2 types of WS may be distinguished: type 1 and type 2 (WS1 and WS2).","definition_xrefs":["Orphanet:3463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolfram syndrome","secondary_identifiers":["SCTID:70694009","UMLS:C0043207","NCIT:C35133","icd11.foundation:151381747","ICD9:250.80","NANDO:1200757","DOID:10632","MEDGEN:21923","GARD:7898","MESH:D014929"],"synonyms":[{"name":"DIDMOAD","type":"exact"},{"name":"DIDMOAD syndrome","type":"exact"},{"name":"WFS","type":"exact"},{"name":"Wolfram syndrome","type":"exact"},{"name":"diabetes insipidus, diabetes mellitus, optic atrophy, and deafness syndrome","type":"exact"},{"name":"diabetes insipidus-diabetes mellitus-optic atrophy-deafness syndrome","type":"exact"},{"name":"diabetes mellitus and insipidus with optic atrophy and deafness","type":"exact"}],"termid":"MONDO:0018105","xrefs":{"Monarch":{"xref_id":"0018105"}}}


id: GO:1901578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of alkane biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"negatively_regulates","term_name":"alkane biosynthetic process","termid":"GO:0043447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of alkane biosynthetic process","synonyms":[{"name":"down regulation of alkane anabolism","type":"exact"},{"name":"down regulation of alkane biosynthesis","type":"exact"},{"name":"down regulation of alkane biosynthetic process","type":"exact"},{"name":"down regulation of alkane formation","type":"exact"},{"name":"down regulation of alkane synthesis","type":"exact"},{"name":"down-regulation of alkane anabolism","type":"exact"},{"name":"down-regulation of alkane biosynthesis","type":"exact"},{"name":"down-regulation of alkane biosynthetic process","type":"exact"},{"name":"down-regulation of alkane formation","type":"exact"},{"name":"down-regulation of alkane synthesis","type":"exact"},{"name":"downregulation of alkane anabolism","type":"exact"},{"name":"downregulation of alkane biosynthesis","type":"exact"},{"name":"downregulation of alkane biosynthetic process","type":"exact"},{"name":"downregulation of alkane formation","type":"exact"},{"name":"downregulation of alkane synthesis","type":"exact"},{"name":"inhibition of alkane anabolism","type":"exact"},{"name":"inhibition of alkane biosynthesis","type":"exact"},{"name":"inhibition of alkane biosynthetic process","type":"narrow"},{"name":"inhibition of alkane formation","type":"exact"},{"name":"inhibition of alkane synthesis","type":"exact"},{"name":"negative regulation of alkane anabolism","type":"exact"},{"name":"negative regulation of alkane biosynthesis","type":"exact"},{"name":"negative regulation of alkane formation","type":"exact"},{"name":"negative regulation of alkane synthesis","type":"exact"}],"termid":"GO:1901578"}


id: PBO:0073431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 1","termid":"PBO:0073431"}


id: PBO:0113195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master regulator of meiosis that is active only during meiotic events; activates transcription of early meiotic genes through interaction with Ume6p; regulator of meiotic commitment; degraded by the 26S proteasome following phosphorylation by Ime2p; transcription is negatively regulated in cis by the IRT1 long noncoding antisense RNA","termid":"PBO:0113195"}


id: PBO:0086106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of succinate dehydrogenase; interacts with flavinylated Sdh1p and may function as a chaperone for free Sdh1p, protecting its FAD cofactor from redox reactions before assembly of the complex; soluble protein of the mitochondrial matrix; respiratory defect of null mutant is functionally complemented by Drosophila and human orthologs","termid":"PBO:0086106"}


id: FYPO:0009025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing isoleucine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population growth on isoleucine nitrogen source","synonyms":[{"name":"increased growth on isoleucine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on isoleucine nitrogen source","type":"exact"}],"termid":"FYPO:0009025"}


id: GO:0071719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of leukotrienes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Leukotrienes are linear C20 endogenous metabolites of arachidonic acid (icosa-5,8,11,14-tetraenoic acid) containing a terminal carboxy function and four or more double bonds (three or more of which are conjugated) as well as other functional groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene transport","termid":"GO:0071716"},{"relation_name":"is_a","term_name":"sodium-independent icosanoid transport","termid":"GO:0071718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sodium-independent leukotriene transport","termid":"GO:0071719"}


id: PBO:0003585
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pof Six Interacting Protein","termid":"PBO:0003585"}


id: PR:O42911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm25 gene.","definition_xrefs":["UniProtKB:O42911","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.04","synonyms":[{"name":"Spom972h-rsm25","type":"exact"}],"termid":"PR:O42911"}


id: MONDO:0001719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An bursitis caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bursitis","termid":"MONDO:0002471"},{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal bursitis","secondary_identifiers":["UMLS:C0153218","icd11.foundation:360081115","SCTID:46699001","MEDGEN:509211","ICD9:098.52","DOID:13453"],"synonyms":[{"name":"Neisseria gonorrhoeae bursitis","type":"exact"},{"name":"Neisseria gonorrhoeae caused bursitis","type":"exact"}],"termid":"MONDO:0001719","xrefs":{"Monarch":{"xref_id":"0001719"}}}


id: PR:O43066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk30 gene.","definition_xrefs":["UniProtKB:O43066","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.02","synonyms":[{"name":"Spom972h-ppk30","type":"exact"}],"termid":"PR:O43066"}


id: PBO:0027805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_JM216","termid":"PBO:0027805"}


id: GO:0046283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving anthocyanins, any member of a group of intensely colored soluble glycosides of anthocyanidins that occur in plants. They are responsible from most of the scarlet, purple, mauve and blue coloring in higher plants, especially of flowers.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin-containing compound metabolic process","synonyms":[{"name":"anthocyanin metabolic process","type":"exact"},{"name":"anthocyanin metabolism","type":"exact"}],"termid":"GO:0046283"}


id: PBO:0084500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for meiotic recombination; makes DNA double-strand breaks (DSB) during meiotic recombination, homolog pairing, and synaptonemal complex formation; role in meiotic DSB formation involves a topo-II-like transesterase mechanism; forms monotetrameric complex; covalently linked to DSBs through a 5'-phosphodiester bond between a catalytic tyrosine (Y135) and the DSB 5'- end; sequence similarity to a topo VI subunit from archaea, fission yeast rec12 and human SPO11","termid":"PBO:0084500"}


id: MONDO:0022151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone fracture","termid":"MONDO:0005315"},{"relation_name":"is_a","term_name":"developmental disability","termid":"MONDO:0005287"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitty Hall Webb syndrome","secondary_identifiers":["MESH:C535929","MEDGEN:418975","SCTID:725103004","UMLS:C2931066"],"synonyms":[{"name":"bowed tibiae, radial anomalies, osteopenia, multiple fractures and developmental delay","type":"related"}],"termid":"MONDO:0022151","xrefs":{"Monarch":{"xref_id":"0022151"}}}


id: MONDO:0004630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"substance-induced psychosis","secondary_identifiers":["MEDGEN:18746","ICD9:293.89","UMLS:C0033941","DOID:8646"],"termid":"MONDO:0004630","xrefs":{"Monarch":{"xref_id":"0004630"}}}


id: GO:0005391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in).","definition_xrefs":["EC:7.2.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type sodium transporter activity","termid":"GO:0008554"},{"relation_name":"is_a","term_name":"P-type potassium transmembrane transporter activity","termid":"GO:0008556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"P-type sodium:potassium-exchanging transporter activity","secondary_identifiers":["Reactome:R-HSA-936897","RHEA:18353","TC:3.A.3.1.1","Wikipedia:ATPase\\,_Na%2B/K%2B_transporting\\,_alpha_1","MetaCyc:3.6.3.9-RXN"],"synonyms":[{"name":"Na(+)/K(+)-ATPase activity","type":"related"},{"name":"Na(+)/K(+)-exchanging ATPase activity","type":"related"},{"name":"Na+,K+-ATPase activity","type":"related"},{"name":"Na+/K+-ATPase activity","type":"related"},{"name":"Na+/K+-exchanging ATPase activity","type":"related"},{"name":"Na,K-activated ATPase activity","type":"related"},{"name":"P-type sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"sodium pump","type":"broad"},{"name":"sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"sodium:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:0005391"}


id: PBO:0005348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex subunit Vid21","termid":"PBO:0005348"}


id: GO:0051435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH4 protein domain, present in Bcl-2 family members. All anti-apoptotic proteins contain BH1 and BH2 domains; some also contain an additional N-terminal BH4 domain, which is almost never seen in pro-apoptotic proteins. Loss of the BH4 domain can diminish or abrogate anti-apoptotic function or even impart outright death-promoting properties to the protein.","definition_xrefs":["Prosite:PS50063","Prosite:PS01260","InterPro:IPR003093","PMID:11048732","PMID:12133724","PMID:9020082","PMID:9704409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BH4 domain binding","termid":"GO:0051435"}


id: FYPO:0004393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during meiosis I, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lagging meiotic chromosomes","termid":"FYPO:0002091"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"lagging chromosomes during meiosis I","synonyms":[{"name":"lagging chromosomes during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004393"}


id: MONDO:0012943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the IDH3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"IDH3B-related retinopathy","termid":"MONDO:0800393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 46","secondary_identifiers":["DOID:0110409","ICD10CM:H35.5","MESH:C567249","MEDGEN:382614","UMLS:C2675496","GARD:15571","OMIM:612572"],"synonyms":[{"name":"IDH3B retinitis pigmentosa","type":"exact"},{"name":"RP46","type":"exact"},{"name":"retinitis pigmentosa 46","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in IDH3B","type":"exact"},{"name":"retinitis pigmentosa type 46","type":"exact"},{"name":"retinitis pigmentosa, autosomal recessive, Idh3B-related","type":"related"}],"termid":"MONDO:0012943","xrefs":{"Monarch":{"xref_id":"0012943"}}}


id: PATO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the axis of an organism.","definition_xrefs":["PATOC:EH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalized adaxially","termid":"PATO:0002396"}


id: PBO:0059406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 3","termid":"PBO:0059406"}


