# terms

id: MOD:01772
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The palmityl cation protein modification reporter fragment produced by fragmentation of some palmitoyl modified residues.","definition_xrefs":["PubMed:18688235","PubMed:8413602"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmityl reporter fragment","synonyms":[{"name":"Pam+","type":"exact"},{"name":"palmityl cation","type":"related"}],"termid":"MOD:01772"}


id: SO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation where it decreases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_repressed","termid":"SO:0000126"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_autoregulated","synonyms":[{"name":"negatively autoregulated","type":"exact"}],"termid":"SO:0000473"}


id: PBO:0000498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CwfJ family protein, splicing factor (predicted)","termid":"PBO:0000498"}


id: FYPO:0001335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of DNA-dependent transcription in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulation phenotype","termid":"FYPO:0000143"},{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"transcription regulation phenotype during vegetative growth","synonyms":[{"name":"fission yeast transcription regulation phenotype during vegetative growth","type":"exact"},{"name":"gene-specific transcription regulation phenotype during vegetative growth","type":"related"},{"name":"transcription regulation phenotype during mitotic cell cycle","type":"related"},{"name":"transcriptional control phenotype during vegetative growth","type":"broad"}],"termid":"FYPO:0001335"}


id: GO:1902950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic spine maintenance.","definition_xrefs":["GOC:TermGenie","PMID:24328732","GO_REF:0000058","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynapse organization","termid":"GO:0099175"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"dendritic spine maintenance","termid":"GO:0097062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic spine maintenance","termid":"GO:1902950"}


id: PBO:0053038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 1, translational regulator","termid":"PBO:0053038"}


id: PBO:0080740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWTR1 antisense RNA 1","termid":"PBO:0080740"}


id: PBO:0068033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 338","termid":"PBO:0068033"}


id: PBO:0086160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for rDNA silencing and mitotic rDNA condensation; stimulates Cdc14p phosphatase activity and biphasic release to promote rDNA repeat segregation; required for condensin recruitment to the replication fork barrier site; TOF2 has a paralog, NET1, that arose from the whole genome duplication","termid":"PBO:0086160"}


id: GO:0008552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(in) + ATP = Me2+(out) + ADP + phosphate, where Me is Zn2+, Cd2+, Co2+, Ni2+ or Pb2+.","definition_xrefs":["TC:3.A.3.6.2"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity (obsolete GO:0008552)","synonyms":[{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"exact"}],"termid":"GO:0008552"}


id: GO:0009429
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the central rod of the bacterial-type flagellar basal body that is proximal to the cell membrane; the proximal rod connects the distal rod to the flagellar motor.","definition_xrefs":["GOC:cilia","PMID:10572114","PMID:11133968","PMID:12624192","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body, rod","termid":"GO:0030694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, proximal rod","synonyms":[{"name":"flagellar basal body, proximal rod","type":"exact"},{"name":"flagellin-based flagellum basal body, proximal rod","type":"exact"}],"termid":"GO:0009429"}


id: PBO:0027973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_succinate_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0027973"}


id: PBO:0081706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 626","termid":"PBO:0081706"}


id: PBO:0054770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2182","termid":"PBO:0054770"}


id: PBO:0088690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit","termid":"PBO:0088690"}


id: PBO:0070845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 24","termid":"PBO:0070845"}


id: FYPO:0003047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the silent mating-type cassette than normal, such that it extends beyond the IRR boundary element.","definition_xrefs":["PomBase:mah","PMID:24013502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRR","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRR during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRR during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRR","type":"exact"}],"termid":"FYPO:0003047"}


id: GO:0002934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"desmosome organization","termid":"GO:0002934"}


id: PBO:0067011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 19, pseudogene","termid":"PBO:0067011"}


id: GO:0051456
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87080,93025],"is_not":false,"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis II. During meiosis II sister kinetochores are situated facing opposite spindle poles and bipolar attachment of the sister chromosomes to the spindle occurs.","definition_xrefs":["GOC:clt","GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase II chromosome alignment","termid":"GO:0043061"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to meiosis II kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of meiotic spindle microtubules to kinetochore in meiosis II","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiosis II","type":"related"},{"name":"meiotic bipolar attachment","type":"related"}],"termid":"GO:0051456","terms_by_termid":{"GO:0051456":null}}


id: GO:0120317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and organization of the sperm mitochondrial sheath, the tightly packed helical sheath of ATP-producing mitochondria restricted to the midpiece of the sperm flagellum.","definition_xrefs":["PMID:32791035","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"sperm flagellum assembly","termid":"GO:0120316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"sperm mitochondrial sheath assembly","termid":"GO:0120317"}


id: MONDO:0009996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rhizomelic syndrome, Urbach type is a rare primary bone dysplasia characterized by upper limbs rhizomelia and other skeletal anomalies (e.g. short stature, dislocated hips, digitalization of the thumb with bifid distal phalanx), craniofacial features (e.g. microcephaly, large anterior fontanelle, fine and sparse scalp hair, depressed nasal bridge, high arched palate, micrognathia, short neck), congenital heart defects (e.g. pulmonary stenosis), delayed psychomotor development and mild flexion contractures of elbows. Radiologic evaluation may reveal flared epiphyses, platyspondyly and/or digital anomalies.","definition_xrefs":["Orphanet:3098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhizomelic syndrome, Urbach type","secondary_identifiers":["MEDGEN:376574","MESH:C537611","OMIM:268250","UMLS:C1849382","GARD:4705"],"synonyms":[{"name":"familial rhizomelic dysplasia","type":"related"},{"name":"rhizomelic dysplasia, familial","type":"related"},{"name":"rhizomelic syndrome","type":"related"}],"termid":"MONDO:0009996","xrefs":{"Monarch":{"xref_id":"0009996"}}}


id: PR:Q9P5N4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC359.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P5N4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C359.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.01","synonyms":[{"name":"Spom972h-SPBC359.01","type":"exact"}],"termid":"PR:Q9P5N4"}


id: PR:Q9USV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5-dependent recombination DNA repair protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.07","synonyms":[{"name":"DNA repair protein dds20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sfr1","type":"exact"},{"name":"meiotically up-regulated gene 13 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV1"}


id: GO:0097427
data:
  {"annotated_genes":["SJAG_02761","SJAG_04841","SJAG_03540","SJAG_02624","SJAG_02737","SJAG_01196","SJAG_03073","SJAG_03264"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905720"},{"annotations":[117782,96479,100613,111897,116073,117267,99563,113176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099070"}]},"cv_name":"cellular_component","definition":"An arrangement of closely apposed microtubules running parallel to each other.","definition_xrefs":["NIF_Subcellular:sao1872343973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01196":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microtubule bundle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule fascicle","type":"exact"}],"termid":"GO:0097427","terms_by_termid":{"GO:0099070":null,"GO:1905720":null}}


id: PBO:0005643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein (predicted)","termid":"PBO:0005643"}


id: PBO:0072127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 4","termid":"PBO:0072127"}


id: PBO:0077814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible protein 3","termid":"PBO:0077814"}


id: PR:O13932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BET1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein bet1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.13","secondary_identifiers":["UniProtKB:O13932"],"synonyms":[{"name":"Spom972h-BET1","type":"exact"}],"termid":"PR:O13932"}


id: GO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventricular septum intermedium over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septum development","termid":"GO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum intermedium development","termid":"GO:0003282"}


id: GO:0008605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of the enzyme protein kinase CK2.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase CK2 regulator activity (obsolete GO:0008605)","synonyms":[{"name":"casein kinase II, regulator","type":"exact"},{"name":"protein kinase CK2 regulator activity","type":"exact"},{"name":"protein kinase CK2, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008605"}


id: FYECO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited zinc","synonyms":[{"name":"limited Zn added","type":"exact"}],"termid":"FYECO:0000177"}


id: MONDO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of tick-borne disease which presents on the skin caused by bacteria of the genus Rickettsia.","definition_xrefs":["Wikipedia:Spotted_fever"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsiaceae infectious disease","termid":"MONDO:0006927"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spotted fever","secondary_identifiers":["UMLS:C5680374","EFO:1002047","ICD9:083.8","GARD:19828","ICD9:082.0","DOID:11104","Orphanet:102022","MEDGEN:1826170","ICD10CM:A77","icd11.foundation:9953620","SCTID:186771002"],"synonyms":[{"name":"fever, spotted","type":"related"},{"name":"fevers, spotted","type":"related"},{"name":"spotted fever","type":"exact"},{"name":"spotted fever Group Rickettsioses","type":"related"},{"name":"spotted fever Group rickettsiosis","type":"related"},{"name":"spotted fever group rickettsial disease","type":"exact"},{"name":"spotted fever rickettsiae disease","type":"exact"},{"name":"spotted fever rickettsiosis","type":"exact"},{"name":"spotted fevers","type":"related"}],"termid":"MONDO:0001195","xrefs":{"Monarch":{"xref_id":"0001195"}}}


id: FYPO:0000074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of a drug than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to drug (obsolete FYPO:0000074)","synonyms":[{"name":"drug resistance","type":"exact"},{"name":"drug resistant","type":"exact"},{"name":"resistance to drug during vegetative growth","type":"exact"},{"name":"resistant to drugs","type":"exact"}],"termid":"FYPO:0000074"}


id: PBO:0070518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 17","termid":"PBO:0070518"}


id: GO:0017051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + retinol = adenosine 3',5'-bisphosphate + anhydroretinol.","definition_xrefs":["PMID:9857081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"retinol dehydratase activity","termid":"GO:0017051"}


id: MOD:00658
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a methylated arginine, either 5-methylargine, N5-methylarginine, or an omega-N-methylated L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated arginine","synonyms":[{"name":"MeArg","type":"exact"}],"termid":"MOD:00658"}


id: PBO:0062675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily C member 36","termid":"PBO:0062675"}


id: PBO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthine phosphoribosyltransferase (predicted)","termid":"PBO:0001377"}


id: PBO:0031565
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_binding","termid":"PBO:0031565"}


id: PBO:0027430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_damage_at_stalled_replication_fork","termid":"PBO:0027430"}


id: MONDO:0016126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"viral myositis","secondary_identifiers":["Orphanet:206991","MEDGEN:508472","UMLS:C0150005","icd11.foundation:864399177","SCTID:240105009","GARD:20377","ICD9:729.1","MedDRA:10051512"],"termid":"MONDO:0016126","xrefs":{"Monarch":{"xref_id":"0016126"}}}


id: MONDO:0044244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nail low-sulfur protein (obsolete MONDO:0044244)","secondary_identifiers":["OMIM:161080"],"synonyms":[{"name":"nail LOW-sulfur PROTEIN","type":"related"}],"termid":"MONDO:0044244","xrefs":{"Monarch":{"xref_id":"0044244"}}}


id: PBO:0054042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1378","termid":"PBO:0054042"}


id: GO:0009932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth that occurs specifically at the tip of a cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell tip growth","termid":"GO:0009932"}


id: GO:0036493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, or increases the frequency, rate or extent of translation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"is_a","term_name":"regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translation in response to endoplasmic reticulum stress","synonyms":[{"name":"positive regulation of translation in response to ER stress","type":"exact"}],"termid":"GO:0036493"}


id: PBO:0069052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 298, pseudogene","termid":"PBO:0069052"}


id: GO:0140735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lovastatin (also known as mevinolin, mevacor or monacolin K), a hypolipidemic inhibitor of (3S)-hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR).","definition_xrefs":["PMID:10334994","PMID:10381407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lovastatin biosynthetic process","secondary_identifiers":["kegg.module:M00893","MetaCyc:PWY-7535"],"synonyms":[{"name":"lovastatin anabolism","type":"exact"},{"name":"lovastatin biosynthesis","type":"exact"},{"name":"lovastatin formation","type":"exact"},{"name":"lovastatin synthesis","type":"exact"},{"name":"mevacor anabolism","type":"exact"},{"name":"mevacor biosynthesis","type":"exact"},{"name":"mevacor biosynthetic process","type":"exact"},{"name":"mevacor formation","type":"exact"},{"name":"mevacor synthesis","type":"exact"},{"name":"mevinolin anabolism","type":"exact"},{"name":"mevinolin biosynthesis","type":"exact"},{"name":"mevinolin biosynthetic process","type":"exact"},{"name":"mevinolin formation,","type":"exact"},{"name":"mevinolin synthesis","type":"exact"},{"name":"monacolin K anabolism","type":"exact"},{"name":"monacolin K biosynthesis","type":"exact"},{"name":"monacolin K biosynthetic process","type":"exact"},{"name":"monacolin K formation","type":"exact"},{"name":"monacolin K synthesis","type":"exact"}],"termid":"GO:0140735"}


id: MONDO:0100386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(v;11q23.3). (A chromosomal abnormality consisting of the translocation of genetic material from any one of several chromosomes to the 11q23.3 region, resulting in an MLL gene rearrangement.)","definition_xrefs":["NCIT:C36517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(v;11q23.3)","synonyms":[{"name":"AML, 11q23.3 Translocation","type":"exact"},{"name":"AML, t(11;v)(q23.3;v)","type":"exact"},{"name":"AML, t(11;v)(q23;v)","type":"exact"},{"name":"AML, t(V;11)(v;q23)","type":"exact"},{"name":"AML, t(V;11)(v;q23.3)","type":"exact"},{"name":"AML, t(v;11q23.3)","type":"exact"}],"termid":"MONDO:0100386","xrefs":{"Monarch":{"xref_id":"0100386"}}}


id: PBO:0081936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1F","termid":"PBO:0081936"}


id: GO:1904196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of granulosa cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22383759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of granulosa cell proliferation","termid":"GO:1904195"},{"relation_name":"negatively_regulates","term_name":"granulosa cell proliferation","termid":"GO:1990739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulosa cell proliferation","synonyms":[{"name":"down regulation of granulosa cell proliferation","type":"exact"},{"name":"down-regulation of granulosa cell proliferation","type":"exact"},{"name":"downregulation of granulosa cell proliferation","type":"exact"},{"name":"inhibition of granulosa cell proliferation","type":"narrow"}],"termid":"GO:1904196"}


id: PBO:0048802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 2","termid":"PBO:0048802"}


id: GO:0051439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of ubiquitin ligase activity that contributes to the mitotic cell cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle (obsolete GO:0051439)","synonyms":[{"name":"mitotic APC regulator","type":"narrow"},{"name":"mitotic SCF complex regulator","type":"narrow"},{"name":"mitotic anaphase-promoting complex regulator","type":"narrow"},{"name":"mitotic ubiquitin ligase regulator","type":"related"},{"name":"mitotic ubiquitin-protein ligase regulator","type":"related"},{"name":"regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"regulation of ubiquitin-protein ligase activity during mitotic cell cycle","type":"related"}],"termid":"GO:0051439"}


id: PBO:0052069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 8","termid":"PBO:0052069"}


id: MONDO:0859143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that is caused by a variation in the SPEN gene and is characterized by developmental delay/intellectual disability, autism spectrum disorder, anxiety, aggressive behavior, attention deficit disorder, hypotonia, brain and spine anomalies, congenital heart defects, high/narrow palate, facial dysmorphisms, and obesity/increased BMI, especially in females.","definition_xrefs":["PMID:33596411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Radio-Tartaglia syndrome","secondary_identifiers":["Orphanet:662234","OMIM:619312","MEDGEN:1778557","UMLS:C5543339"],"synonyms":[{"name":"SPEN-related neurodevelopmental disorder","type":"exact"}],"termid":"MONDO:0859143","xrefs":{"Monarch":{"xref_id":"0859143"}}}


id: PBO:0036344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase Ura2","termid":"PBO:0036344"}


id: FYPO:0004583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic chromosome condensation is abnormal.","definition_xrefs":["PomBase:mah","PMID:23263988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome condensation","termid":"FYPO:0000159"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic chromosome condensation","synonyms":[{"name":"abnormal chromosome condensation during meiosis I","type":"exact"},{"name":"abnormal chromosome condensation during meiotic cell cycle","type":"related"}],"termid":"FYPO:0004583"}


id: MONDO:0004183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nerve disorder affecting the axon of a nerve.","definition_xrefs":["NCIT:C27301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"axonal neuropathy","secondary_identifiers":["DOID:7319","UMLS:C1263857","SCTID:60703000","MEDGEN:266071"],"synonyms":[{"name":"axon peripheral neuropathy","type":"exact"},{"name":"axonal neuropathy","type":"exact"},{"name":"peripheral neuropathy of axon","type":"exact"}],"termid":"MONDO:0004183","xrefs":{"Monarch":{"xref_id":"0004183"}}}


id: MONDO:0100190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaplastic changes in the lining of the upper digestive tract.","definition_xrefs":["PMID:29606921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"},{"relation_name":"is_a","term_name":"precancerous condition","termid":"MONDO:0021074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric intestinal metaplasia","secondary_identifiers":["MEDGEN:75629","NCIT:C8360","UMLS:C0267187"],"synonyms":[{"name":"GIM","type":"exact"},{"name":"intestinal metaplasia","type":"exact"}],"termid":"MONDO:0100190","xrefs":{"Monarch":{"xref_id":"0100190"}}}


id: PBO:0028584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_stationary_phase","termid":"PBO:0028584"}


id: GO:0097149
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex playing a key role in the formation of the central spindle in mitosis. Made up of two molecules each of a mitotic kinesin (ZEN-4 in Caenorhabditis elegans or MKLP1 in mammals) and of two molecules each of a GTPase activating protein (GAP) factor (CYK-4 in Caenorhabditis elegans or MgcRacGAP in mammals).","definition_xrefs":["PMID:11782313","PMID:16236794","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"mitotic spindle","termid":"GO:0072686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0072686","GO:0005575"],"is_obsolete":false,"name":"centralspindlin complex","termid":"GO:0097149"}


id: PBO:0091305
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative mRNA processing","termid":"PBO:0091305"}


id: PBO:0061994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily D member 3","termid":"PBO:0061994"}


id: PATO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of liquids.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a liquid","termid":"PATO:0001548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liquid configuration","synonyms":[{"name":"liquid","type":"exact"}],"termid":"PATO:0001735"}


id: GO:1904360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spore germination.","definition_xrefs":["GOC:TermGenie","PMID:14718564","PMID:8798577","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"negatively_regulates","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spore germination","secondary_identifiers":["GO:0075008"],"synonyms":[{"name":"down regulation of spore germination","type":"exact"},{"name":"down-regulation of spore germination","type":"exact"},{"name":"downregulation of spore germination","type":"exact"},{"name":"inhibition of spore germination","type":"narrow"},{"name":"negative regulation of spore germination on or near host","type":"narrow"}],"termid":"GO:1904360"}


id: PBO:0051425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-2 (pseudogene)","termid":"PBO:0051425"}


id: GO:0102527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-amino-4,7-dihydroxycoumarin + 3-dimethylallyl-4-hydroxybenzoate + ATP(4-) = H+ + 8-desmethylnovobiocic acid(1-) + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-demethylnovobiocate synthase activity","secondary_identifiers":["RHEA:36699","MetaCyc:RXN-14547"],"termid":"GO:0102527"}


id: GO:1900979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of tatiopterin metabolic process","termid":"GO:1900977"},{"relation_name":"positively_regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of tatiopterin metabolic process","synonyms":[{"name":"activation of tatiopterin metabolic process","type":"narrow"},{"name":"activation of tatiopterin metabolism","type":"exact"},{"name":"positive regulation of tatiopterin metabolism","type":"exact"},{"name":"up regulation of tatiopterin metabolic process","type":"exact"},{"name":"up regulation of tatiopterin metabolism","type":"exact"},{"name":"up-regulation of tatiopterin metabolic process","type":"exact"},{"name":"up-regulation of tatiopterin metabolism","type":"exact"},{"name":"upregulation of tatiopterin metabolic process","type":"exact"},{"name":"upregulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900979"}


id: PBO:0071002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 4","termid":"PBO:0071002"}


id: MONDO:0859248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, punctiform and polychromatic pre-descemet","secondary_identifiers":["MEDGEN:1806182","OMIM:619871","UMLS:C5676982"],"termid":"MONDO:0859248","xrefs":{"Monarch":{"xref_id":"0859248"}}}


id: PBO:0045567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 15","termid":"PBO:0045567"}


id: GO:0044376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of the DNA-directed RNA polymerase II core complex from the cytoplasm into the nucleus.","definition_xrefs":["GOC:dos","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II complex import to nucleus (obsolete GO:0044376)","synonyms":[{"name":"DNA-directed RNA polymerase II core complex import into nucleus","type":"exact"},{"name":"DNA-directed RNA polymerase II core complex localization to nucleus","type":"exact"},{"name":"RNA polymerase II complex import into nucleus","type":"exact"},{"name":"RNA polymerase II complex localisation to nucleus","type":"exact"}],"termid":"GO:0044376"}


id: MONDO:0019190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile polyposis of infancy (JPI) is the most severe form of juvenile gastrointestinal polyposis and is characterized by pancolonic hamartomatous polyposis from stomach to rectum, diagnosed in the first two years of life.","definition_xrefs":["Orphanet:79076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile polyposis syndrome","termid":"MONDO:0017380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"juvenile polyposis of infancy","secondary_identifiers":["MEDGEN:1778573","icd11.foundation:378686036","UMLS:C5445164","GARD:16696"],"synonyms":[{"name":"infantile juvenile polyposis syndrome","type":"exact"},{"name":"infantile onset juvenile polyposis syndrome","type":"exact"},{"name":"juvenile polyposis syndrome of infancy","type":"exact"}],"termid":"MONDO:0019190","xrefs":{"Monarch":{"xref_id":"0019190"}}}


id: PBO:0047405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 43","termid":"PBO:0047405"}


id: PBO:0052409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 3","termid":"PBO:0052409"}


id: PBO:0086980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; VTC2 has a paralog, VTC3, that arose from the whole genome duplication","termid":"PBO:0086980"}


id: FYPO:0003590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which vacuoles are smaller than normal during sporulation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles during sporulation","synonyms":[{"name":"vacuoles present in increased numbers, with decreased vacuole size, during sporulation","type":"exact"}],"termid":"FYPO:0003590"}


id: MONDO:1011915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse cystic renal dysplasia and hepatic fibrosis, non-human animal","secondary_identifiers":["OMIA:002173"],"termid":"MONDO:1011915","xrefs":{"Monarch":{"xref_id":"1011915"}}}


id: PBO:0004301
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae COQ8","termid":"PBO:0004301"}


id: PBO:0090915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tryptophan-tRNA ligase Msw1","termid":"PBO:0090915"}


id: PBO:0074326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2","termid":"PBO:0074326"}


id: PBO:0091688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Itsy-Bitsy Phosphatase","termid":"PBO:0091688"}


id: PBO:0003461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NST UDP-N-acetylglucosamine transporter (predicted)","termid":"PBO:0003461"}


id: PR:Q9Y7L1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosducin-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin-like protein C2A9.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.09","secondary_identifiers":["UniProtKB:Q9Y7L1"],"synonyms":[{"name":"Spom972h-PDCL2","type":"exact"}],"termid":"PR:Q9Y7L1"}


id: PBO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 2","termid":"PBO:0060639"}


id: PBO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family","termid":"PBO:0000619"}


id: GO:0034971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to arginine at position 17 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R17 methylation (obsolete GO:0034971)","synonyms":[{"name":"histone H3 R17 methylation","type":"exact"},{"name":"histone H3R17me","type":"exact"},{"name":"histone lysine H3 R17 methylation","type":"exact"}],"termid":"GO:0034971"}


id: PBO:0067493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 628, pseudogene","termid":"PBO:0067493"}


id: GO:0000947
data:
  {"annotated_genes":["SJAG_04842","SJAG_03743","SJAG_02734"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96457,96456,87715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process via Ehrlich pathway","termid":"GO:0000955"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"amino acid catabolic process to alcohol via Ehrlich pathway","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000947","terms_by_termid":{"GO:0000949":null}}


id: PBO:0005557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf13","termid":"PBO:0005557"}


id: GO:1905664
data:
  {"annotated_genes":["SJAG_03631","SJAG_04551","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90422,112492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[101328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:bhm","PMID:17640527","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion import","termid":"GO:0090279"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion import across plasma membrane","termid":"GO:0098703"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905664","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0016516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-4 (IL-4) and consists of an alpha chain that binds IL-4 with high affinity and a gamma common chain that also forms part of the interleukin-2 receptor.","definition_xrefs":["PMID:10358772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-4 receptor complex","synonyms":[{"name":"IL-4 receptor complex","type":"exact"}],"termid":"GO:0016516"}


id: GO:2000050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of non-canonical Wnt signaling pathway.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"regulates","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of non-canonical Wnt signaling pathway","synonyms":[{"name":"regulation of beta-catenin-independent Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of non-canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of non-canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of non-canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:2000050"}


id: PBO:0114072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily A member 2, pseudogene","termid":"PBO:0114072"}


id: FYPO:0007495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is normal (i.e. indistinguishable from wild type). The Mei2 nuclear dot is a nuclear body that contains Mei2, other proteins, and meiRNA, and forms during meiotic prophase in a fixed position in the horsetail nucleus.","definition_xrefs":["PMID:24920274","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to Mei2 nuclear dot","synonyms":[{"name":"normal protein localisation to Mei2 nuclear dot","type":"exact"},{"name":"normal protein localization to meiRNA nuclear dot","type":"related"}],"termid":"FYPO:0007495"}


id: PBO:0091318
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Recovery of STe11 expression","termid":"PBO:0091318"}


id: GO:1903496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 11-deoxycorticosterone stimulus.","definition_xrefs":["PMID:3585228","GOC:TermGenie","GOC:mr","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 11-deoxycorticosterone","termid":"GO:1903496"}


id: PBO:0036190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0036190"}


id: GO:1903858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an old growing cell tip.","definition_xrefs":["GOC:TermGenie","PMID:17895368","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to growing cell tip","termid":"GO:1902486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to old growing cell tip","synonyms":[{"name":"protein localisation in old growing cell tip","type":"exact"},{"name":"protein localisation to old growing cell tip","type":"exact"},{"name":"protein localization in old growing cell tip","type":"exact"}],"termid":"GO:1903858"}


id: PBO:0058626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6758","termid":"PBO:0058626"}


id: MONDO:0859519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with absent speech and movement and behavioral abnormalities","secondary_identifiers":["UMLS:C5830319","OMIM:620270","MEDGEN:1840955"],"termid":"MONDO:0859519","xrefs":{"Monarch":{"xref_id":"0859519"}}}


id: MONDO:1010769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bullous pemphigoid that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bullous pemphigoid, non-human animal","termid":"MONDO:1010137"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullous pemphigoid, Rhesus monkey","secondary_identifiers":["OMIA:001183-9544"],"termid":"MONDO:1010769","xrefs":{"Monarch":{"xref_id":"1010769"}}}


id: FYECO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in a medium containing zinc sulfate","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ zinc sulfate","synonyms":[{"name":"+ zinc sulphate","type":"exact"}],"termid":"FYECO:0000404"}


id: PBO:0062337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 76","termid":"PBO:0062337"}


id: PBO:0113427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine kinase that controls cell cycle progression; represses rDNA transcription and promotes 20S pre-rRNA maturation; catalytic activity regulates its association with pre-40S particles where it prevents premature entry into translation; downregulates centromeric RNA levels, limits RNAPII accessibility, stimulates cenRNA degradation and promotes timely kinetochore assembly; autophosphorylates and phosphorylates Rpa43p in anaphase to remove Pol I from rDNA","termid":"PBO:0113427"}


id: GO:1905546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylpropanoid stimulus.","definition_xrefs":["PMID:22700048","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phenylpropanoid","termid":"GO:1905546"}


id: PBO:0017781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node Gef2-related protein protein Nod1","termid":"PBO:0017781"}


id: PBO:0076994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 9","termid":"PBO:0076994"}


id: PBO:0089807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-containing RNA endoribonuclease","termid":"PBO:0089807"}


id: MONDO:0016467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isotretinoin embryopathy is an association of malformations caused by the teratogenic effect of isotretinoin, an oral synthetic vitamin A derivative, which is used to treat severe recalcitrant cystic acne. Exposure to isotretinoin during the first trimester of pregnancy has been associated with an increased risk of spontaneous abortions and severe birth defects including serious craniofacial (microcephaly, asymmetric crying facies, microphthalmia, developmental abnormalities of the external ear, ocular hypertelorism), cardio vascular (conotruncal heart defects, aortic arch abnormalities), and central nervous system (hydrocephalus, microcephaly, lissencephaly, Dandy-Walker malformation, cognitive deficit) anomalies and thymic aplasia. Isoretinoin is contraindicated during pregnancy.","definition_xrefs":["Orphanet:2305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"isotretinoin-like syndrome","termid":"MONDO:0009473"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotretinoin syndrome","secondary_identifiers":["MESH:C535670","SCTID:36871005","MEDGEN:419683","NORD:1140","UMLS:C2930972","GARD:18765","NCIT:C98929"],"synonyms":[{"name":"Accutane fetal effects of","type":"related"},{"name":"Accutane foetal effects of","type":"related"},{"name":"Accutane-exposed pregnancies","type":"related"},{"name":"Acutane embryopathy","type":"related"},{"name":"Fetal Retinoid Syndrome","type":"exact"},{"name":"Isotretinoin (RoAccutane) embryopathy","type":"related"},{"name":"Isotretinoin embryopathy","type":"exact"},{"name":"Isotretinoin fetal effects of","type":"related"},{"name":"Isotretinoin foetal effects of","type":"related"},{"name":"Isotretinoin teratogen syndrome","type":"related"},{"name":"Retinoids embryopathy","type":"exact"},{"name":"fetal isotretinoin syndrome","type":"exact"},{"name":"fetal retinoid syndrome","type":"exact"},{"name":"foetal isotretinoin syndrome","type":"exact"},{"name":"foetal retinoid syndrome","type":"exact"},{"name":"retinoic acid embryopathy","type":"exact"}],"termid":"MONDO:0016467","xrefs":{"Monarch":{"xref_id":"0016467"}}}


id: GO:0102607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3beta-hydroxy-12,15-cassadiene-11-one + NADPH + O2 + H+ = 2beta,3beta-dihydroxy-12,15-cassadiene-11-one + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3beta-hydroxy-12,15-cassadiene-11-one 2-hydroxylase activity (obsolete GO:0102607)","termid":"GO:0102607"}


id: PBO:0048290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 2","termid":"PBO:0048290"}


id: MONDO:0018531
data:
  {"annotated_genes":["SJAG_02049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"}]},"cv_name":"mondo","definition":"A carcinoma that arises from the hepatocytes or intrahepatic bile ducts. The main subtypes are hepatocellular carcinoma (hepatoma) and cholangiocarcinoma.","definition_xrefs":["NCIT:C7927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver cancer","termid":"MONDO:0002691"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02049":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of liver and intrahepatic biliary tract","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:C22.1","GARD:21786","ONCOTREE:HCCIHCH","Orphanet:424936","MEDGEN:78921","UMLS:C0279000"],"synonyms":[{"name":"cancer of liver","type":"broad"},{"name":"cancer of liver and intrahepatic biliary tract","type":"broad"},{"name":"cancer of the liver","type":"broad"},{"name":"cancer of the liver and intrahepatic biliary tract","type":"broad"},{"name":"carcinoma of liver","type":"broad"},{"name":"carcinoma of liver and IBT","type":"exact"},{"name":"hepatic cancer","type":"broad"},{"name":"hepatocellular carcinoma plus intrahepatic cholangiocarcinoma","type":"related"},{"name":"liver and intrahepatic bile duct cancer","type":"broad"},{"name":"liver and intrahepatic bile duct carcinoma","type":"exact"},{"name":"liver and intrahepatic biliary tract cancer","type":"exact"},{"name":"liver and intrahepatic biliary tract carcinoma","type":"exact"},{"name":"liver cancer","type":"broad"},{"name":"liver carcinoma","type":"broad"},{"name":"liver/hepatobiliary cancer","type":"broad"},{"name":"primary liver carcinoma","type":"exact"}],"termid":"MONDO:0018531","terms_by_termid":{"MONDO:0007256":null},"xrefs":{"Monarch":{"xref_id":"0018531"}}}


id: PBO:0084395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0084395"}


id: PBO:0005866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 5","termid":"PBO:0005866"}


id: GO:0031643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a myelin sheath around nerve axons.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myelination","termid":"GO:0031641"},{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myelination","synonyms":[{"name":"activation of myelination","type":"narrow"},{"name":"stimulation of myelination","type":"narrow"},{"name":"up regulation of myelination","type":"exact"},{"name":"up-regulation of myelination","type":"exact"},{"name":"upregulation of myelination","type":"exact"}],"termid":"GO:0031643"}


id: GO:1900614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of F-9775B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"F-9775B metabolic process","termid":"GO:1900612"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound biosynthetic process","termid":"GO:1901378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"F-9775B biosynthetic process","synonyms":[{"name":"F-9775B anabolism","type":"exact"},{"name":"F-9775B biosynthesis","type":"exact"},{"name":"F-9775B formation","type":"exact"},{"name":"F-9775B synthesis","type":"exact"}],"termid":"GO:1900614"}


id: PBO:0015654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, predicted cell surface protein","termid":"PBO:0015654"}


id: MONDO:0018652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete biological anomaly without phenotypic characterization (obsolete MONDO:0018652)","secondary_identifiers":["Orphanet:447874"],"termid":"MONDO:0018652","xrefs":{"Monarch":{"xref_id":"0018652"}}}


id: MONDO:0006741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized atrophy of the brain parenchyma due to aging, hemorrhage, infarct, or inflammation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalomalacia","secondary_identifiers":["MEDGEN:4936","NCIT:C98920","EFO:1000915","MedDRA:10051818","icd11.foundation:689481271","MESH:D004678","SCTID:58762006","UMLS:C0014068","DOID:2034"],"termid":"MONDO:0006741","xrefs":{"Monarch":{"xref_id":"0006741"}}}


id: _global:member_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"member_of","termid":"_global:member_of"}


id: PR:O74823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- red5 gene.","definition_xrefs":["UniProtKB:O74823","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH domain-containing protein C337.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.12","synonyms":[{"name":"Spom972h-red5","type":"exact"}],"termid":"PR:O74823"}


id: GO:0071772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bone morphogenetic protein (BMP) stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to BMP","synonyms":[{"name":"response to BMP stimulus","type":"exact"},{"name":"response to bone morphogenetic protein stimulus","type":"exact"}],"termid":"GO:0071772"}


id: MONDO:0014419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ataxia-intellectual disability-oculomotor apraxia-cerebellar cysts syndrome is a rare neuro-ophthalmological disease characterized by nonprogressive cerebellar ataxia, delayed motor and language development, and intellectual disability in addition to ophthalmological abnormalities (e.g. oculomotor apraxia, strabismus, amblyopia, retinal dystrophy, and myopia). Cerebellar cysts, cerebellar dysplasia and cerebellar vermis hypoplasia, seen on magnetic resonance imaging, are also characteristic of the disease.","definition_xrefs":["Orphanet:370022"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"ataxia - intellectual disability - oculomotor apraxia - cerebellar cysts syndrome","secondary_identifiers":["GARD:17597","MEDGEN:863258","UMLS:C4014821","OMIM:615960"],"synonyms":[{"name":"PORETTI-Boltshauser syndrome","type":"related"},{"name":"PTBHS","type":"related"},{"name":"Poretti-Boltshauser syndrome","type":"exact"},{"name":"ataxia - intellectual disability - oculomotor apraxia - cerebellar cysts syndrome","type":"exact"}],"termid":"MONDO:0014419","xrefs":{"Monarch":{"xref_id":"0014419"}}}


id: PBO:0065985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1L","termid":"PBO:0065985"}


id: GO:0047418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a phthalylamide = phthalate + substituted amine.","definition_xrefs":["MetaCyc:3.5.1.79-RXN","EC:3.5.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"phthalyl amidase activity","secondary_identifiers":["RHEA:18297"],"synonyms":[{"name":"o-phthalyl amidase activity","type":"narrow"},{"name":"phthalyl-amide amidohydrolase activity","type":"related"}],"termid":"GO:0047418"}


id: GO:0046680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a DDT stimulus. DDT, dichlorodiphenyltrichloroethane, is a chlorinated hydrocarbon pesticide moderately toxic to humans and other animals.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DDT","synonyms":[{"name":"DDT resistance","type":"related"},{"name":"DDT susceptibility/resistance","type":"related"}],"termid":"GO:0046680"}


id: MONDO:0014224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Developmental delay with autism spectrum disorder and gait instability is a rare, genetic, neurological disorder characterized by infant hypotonia and feeding difficulties, global development delay, mild to moderated intellectual disability, delayed independent ambulation, broad-based gait with arms upheld and flexed at the elbow with brisk walking or running, and limited language skills. Behavior patterns are highly variable and range from sociable and affectionate to autistic behavior.","definition_xrefs":["Orphanet:329195"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"developmental delay with autism spectrum disorder and gait instability","secondary_identifiers":["DOID:0081203","GARD:17496","OMIM:615516","MEDGEN:816083","UMLS:C3809753"],"synonyms":[{"name":"MRT38","type":"related"},{"name":"developmental delay with ASD and gait instability","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 38","type":"exact"},{"name":"intellectual disability, autosomal recessive 38","type":"related"},{"name":"intellectual disability, autosomal recessive type 38","type":"exact"},{"name":"mental retardation, autosomal recessive 38","type":"related"},{"name":"mental retardation, autosomal recessive type 38","type":"exact"}],"termid":"MONDO:0014224","xrefs":{"Monarch":{"xref_id":"0014224"}}}


id: PBO:0079780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A1","termid":"PBO:0079780"}


id: PR:Q9URZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mel1 gene.","definition_xrefs":["UniProtKB:Q9URZ0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-galactosidase mel1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.07c","synonyms":[{"name":"Melibiase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mel1","type":"exact"},{"name":"alpha-D-galactoside galactohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URZ0"}


id: PBO:0073334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 10","termid":"PBO:0073334"}


id: MONDO:0004096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermoid cyst that involves the spinal cord.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"dermoid cyst","termid":"MONDO:0002378"},{"relation_name":"is_a","term_name":"central nervous system teratoma","termid":"MONDO:0002718"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal cord dermoid cyst","secondary_identifiers":["DOID:7071","MEDGEN:232125","NCIT:C6808","UMLS:C1333278"],"synonyms":[{"name":"dermoid cyst of spinal cord","type":"exact"},{"name":"dermoid cyst of the spinal cord","type":"exact"},{"name":"spinal cord dermoid","type":"exact"},{"name":"spinal cord dermoid cyst","type":"exact"}],"termid":"MONDO:0004096","xrefs":{"Monarch":{"xref_id":"0004096"}}}


id: PBO:0089490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer epsilon subunit","termid":"PBO:0089490"}


id: PBO:0043338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN8 transmembrane ER and ERGIC protein","termid":"PBO:0043338"}


id: GO:0007147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the second meiotic division occurs in the female germline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II","termid":"GO:0007135"},{"relation_name":"is_a","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"female meiosis II","synonyms":[{"name":"female meiosis II nuclear division","type":"exact"}],"termid":"GO:0007147"}


id: PBO:0086941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein; involved in nuclear protein import and RNA export, ubiquitin-mediated protein degradation during the cell cycle; shuttles between the nucleus and cytoplasm; is essential; homolog of human RanBP1","termid":"PBO:0086941"}


id: PATO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of a process inhering in a bearer by virtue of the size of the bearer's maximum displacement from the 'normal' position, when periodic motion is taking place.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amplitude","termid":"PATO:0000080"}


id: GO:0090658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A biochemically and structurally distinct domain of the retinal interphotoreceptor matrix that is specifically associated with cone photoreceptor cell inner and outer segments.","definition_xrefs":["GOC:mr","PMID:2055688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"interphotoreceptor matrix","termid":"GO:0033165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cone matrix sheath","termid":"GO:0090658"}


id: GO:0009726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which an endogenous stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of endogenous stimulus (obsolete GO:0009726)","synonyms":[{"name":"perception of endogenous stimulus","type":"related"}],"termid":"GO:0009726"}


id: GO:0033079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an immature T cell population by cell division.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature T cell proliferation","termid":"GO:0033079"}


id: GO:0000812
data:
  {"annotated_genes":["SJAG_04596","SJAG_02571","SJAG_03579","SJAG_02990","SJAG_02466","SJAG_05282","SJAG_04097","SJAG_03145","SJAG_03036","SJAG_01465","SJAG_02798","SJAG_04355","SJAG_02385","SJAG_02500","SJAG_05192","SJAG_03694"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87193,89902,91574,95844,97434,98158,100160,100872,107036,108215,111376,112280,112449,113848,116397,116581],"is_not":false,"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A multisubunit protein complex that is involved in chromatin remodeling. It is required for the incorporation of the histone variant H2AZ into chromatin. In S. cerevisiae, the complex contains Swr1p, a Swi2/Snf2-related ATPase, and 12 additional subunits.","definition_xrefs":["GOC:rb","PMID:14645854","PMID:14690608","PMID:19355820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"is_a","term_name":"INO80-type complex","termid":"GO:0097346"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":16,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02385":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02571":null,"SJAG_02798":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"Swr1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SWR-C","type":"exact"}],"termid":"GO:0000812","terms_by_termid":{"GO:0000812":null}}


id: GO:0103062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP(4-) + H2O + a cis-keto-C60-meroacyl-[acp] = diphosphoric acid + a cis-keto-meroacyl-adenylate + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-keto-C60-meroacyl-AMP ligase activity (obsolete GO:0103062)","termid":"GO:0103062"}


id: PBO:0001243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orp3 (predicted)","termid":"PBO:0001243"}


id: GO:0008419
data:
  {"annotated_genes":["SJAG_01433"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89439],"is_not":false,"summary":null,"term":"GO:0008419"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of branched RNA structures that contain vicinal 2'-5'- and 3'-5'-phosphodiester bonds at a branch point nucleotide.","definition_xrefs":["PMID:7519612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"RNA lariat debranching enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.26.1"],"termid":"GO:0008419","terms_by_termid":{"GO:0008419":null}}


id: PBO:0046803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VIII associated 1","termid":"PBO:0046803"}


id: FYECO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which methylamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ methylamine","termid":"FYECO:0000121"}


id: MONDO:0008186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancytopenia and occlusive vascular disease","secondary_identifiers":["UMLS:C1868652","MEDGEN:358375","OMIM:167850","MESH:C566836"],"synonyms":[{"name":"pancytopenia and occlusive vascular disease","type":"exact"}],"termid":"MONDO:0008186","xrefs":{"Monarch":{"xref_id":"0008186"}}}


id: PBO:0082172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent tRNA methyltransferase and actin binding protein; C-terminal domain is responsible for 3-methylcytidine modification of residue 32 of the tRNA anticodon loop of tRNA-Thr and tRNA-Ser and contains an S-adenosylmethionine (AdoMet) binding motif; N-terminal actin binding sequence interacts with actin filaments and localizes to actin patches and cables; N- and C-terminal domains are encoded in separate ORFs that are translated into one protein via a +1 frameshift","termid":"PBO:0082172"}


id: PBO:0011525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis","termid":"PBO:0011525"}


id: GO:0018045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-lysine amide by hydrolysis and oxidation of an interior Lys-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0092"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-lysine amidation (obsolete GO:0018045)","termid":"GO:0018045"}


id: PBO:0000534
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex binds MCB 5'-ACGCGT-3'","termid":"PBO:0000534"}


id: PBO:0058400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4771-2","termid":"PBO:0058400"}


id: PR:O74818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carboxypeptidase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized carboxypeptidase C337.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.07c","secondary_identifiers":["UniProtKB:O74818"],"synonyms":[{"name":"Spom972h-CPB1","type":"exact"}],"termid":"PR:O74818"}


id: GO:1904817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a serous membrane over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:TermGenie","GO_REF:0000094","PMID:15840053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serous membrane development","synonyms":[{"name":"serosa development","type":"related"},{"name":"tunica serosa development","type":"exact"},{"name":"wall of serous sac development","type":"exact"}],"termid":"GO:1904817"}


id: GO:0033439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"ACA codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033439"}


id: PBO:0110024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku70 (human XRCC6 ortholog) Pku70","termid":"PBO:0110024"}


id: GO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pentraxin, a member of a family of inflammatory proteins with a radially symmetric arrangement of five identical, noncovalently linked chains in a pentagonal array.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"pentraxin binding","termid":"GO:0001864"}


id: MONDO:0017723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Sandhoff disease that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sandhoff disease","termid":"MONDO:0010006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0005244","MONDO:0005559","MONDO:0005328","MONDO:0002525","MONDO:0002039"],"is_obsolete":false,"name":"Sandhoff disease, adult form","secondary_identifiers":["UMLS:C0751489","Orphanet:309169","GARD:17405","MEDGEN:148319","SCTID:238020001"],"synonyms":[{"name":"Hexosaminidases A and B deficiency, adult form","type":"exact"},{"name":"Sandhoff disease of adults","type":"exact"},{"name":"adult GM2 gangliosidosis 0 variant","type":"exact"},{"name":"adult Sandhoff disease","type":"exact"}],"termid":"MONDO:0017723","xrefs":{"Monarch":{"xref_id":"0017723"}}}


id: PR:Q9UTK0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein NOB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12814:SF0","PRO:DNx","OMA:SCHPO01341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S-pre-rRNA D-site endonuclease nob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.09","secondary_identifiers":["UniProtKB:Q9UTK0"],"synonyms":[{"name":"Spom972h-NOB1","type":"exact"},{"name":"pre-rRNA-processing endonuclease nob1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK0"}


id: PBO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Atf1","termid":"PBO:0001039"}


id: FYPO:0000192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A regulation phenotype in which regulation of progression through S phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal regulation of S phase of mitotic cell cycle (obsolete FYPO:0000192)","termid":"FYPO:0000192"}


id: PBO:0059613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 25","termid":"PBO:0059613"}


id: GO:0004328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formamide + H2O = formate + NH4.","definition_xrefs":["RHEA:21948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidase activity","termid":"GO:0004040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"formamidase activity","secondary_identifiers":["MetaCyc:FORMAMIDASE-RXN","GO:0034566","KEGG_REACTION:R00524","UM-BBD_reactionID:r0873","EC:3.5.1.49"],"synonyms":[{"name":"formamide amidohydrolase activity","type":"related"},{"name":"formamide hydrolase activity","type":"exact"}],"termid":"GO:0004328"}


id: GO:0045981
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nucleotide metabolic process","type":"narrow"},{"name":"positive regulation of nucleotide metabolism","type":"exact"},{"name":"stimulation of nucleotide metabolic process","type":"narrow"},{"name":"up regulation of nucleotide metabolic process","type":"exact"},{"name":"up-regulation of nucleotide metabolic process","type":"exact"},{"name":"upregulation of nucleotide metabolic process","type":"exact"}],"termid":"GO:0045981","terms_by_termid":{"GO:1905857":null}}


id: FYPO:0008077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of phosphatidylserine binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:25959226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid binding","termid":"FYPO:0005307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased phosphatidylserine binding","termid":"FYPO:0008077"}


id: GO:0044590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to iron molybdenum cofactor, the cofactor located at the active site of the molybdenum nitrogenase.","definition_xrefs":["PMID:18429691","GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor binding","synonyms":[{"name":"FeMo co binding","type":"exact"},{"name":"FeMoco binding","type":"exact"}],"termid":"GO:0044590"}


id: PBO:0065198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 19","termid":"PBO:0065198"}


id: PBO:0047304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FARSA antisense RNA 1","termid":"PBO:0047304"}


id: GO:0033255
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses histone acetyltransferase activity and links histone acetylation to the assembly of transcriptionally silent chromatin. In vitro, the complex acetylates lysine 16 of histone H4 and lysine 14 of histone H3, although the latter may not be relevant in vivo. The complex contains a catalytic subunit and at least two other subunits; in Saccharomyces, the catalytic subunit is Sas2p and additional subunits are Sas4p and Sas5p.","definition_xrefs":["PMID:11731480","PMID:12626510","PMID:15788653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piccolo histone acetyltransferase complex","termid":"GO:0032777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SAS acetyltransferase complex","synonyms":[{"name":"SAS-I complex","type":"exact"}],"termid":"GO:0033255"}


id: PBO:0074697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70G","termid":"PBO:0074697"}


id: PBO:0066610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1 pseudogene 1","termid":"PBO:0066610"}


id: GO:0018361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of glutamine to form 2-methyl-L-glutamine.","definition_xrefs":["RESID:AA0273","PMID:10660523"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glutamine 2-methylation (obsolete GO:0018361)","termid":"GO:0018361"}


id: GO:1902528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein linear polyubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:21931591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein linear polyubiquitination","termid":"GO:0097039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein linear polyubiquitination","synonyms":[{"name":"regulation of M1 linkage","type":"narrow"}],"termid":"GO:1902528"}


id: PBO:0036281
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROline requiring, pro2","termid":"PBO:0036281"}


id: PBO:0086494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphomutase; contains a region homologous to the active site of phosphomutases; overexpression suppresses the histidine auxotrophy of an ade3 ade16 ade17 triple mutant and the temperature sensitivity of a tps2 mutant","termid":"PBO:0086494"}


id: PBO:0066613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 2","termid":"PBO:0066613"}


id: PBO:0083479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL085W/EXO70 and YJL087C/TRL1","termid":"PBO:0083479"}


id: GO:1905323
data:
  {"annotated_genes":["SJAG_05240","SJAG_02469","SJAG_01819","SJAG_04586","SJAG_01327","SJAG_03070","SJAG_03954","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95024,105508,107694,114071,115005,115544],"is_not":false,"summary":null,"term":"GO:1905323"},{"annotations":[107090,89844,89845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904868"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a telomerase holoenzyme complex.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:26305931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03954":null,"SJAG_04586":null,"SJAG_05240":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"telomerase holoenzyme complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomerase holoenzyme complex formation","type":"exact"}],"termid":"GO:1905323","terms_by_termid":{"GO:1904868":null,"GO:1905323":null}}


id: PBO:0086050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function reputedly involved in spore wall assembly","termid":"PBO:0086050"}


id: MONDO:0037736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that occurs in brain parenchymal tissue below the tentorium cerebelli.","definition_xrefs":["NCIT:C3139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infratentorial neoplasm","secondary_identifiers":["UMLS:C0021432","MEDGEN:5803"],"synonyms":[{"name":"brain neoplasms, infratentorial","type":"exact"},{"name":"infratentorial neoplasm","type":"exact"},{"name":"infratentorial neoplasms","type":"exact"},{"name":"infratentorial tumor","type":"exact"},{"name":"infratentorial tumors","type":"exact"},{"name":"infratentorial tumour","type":"exact"},{"name":"infratentorial tumours","type":"exact"},{"name":"neoplasms, infratentorial","type":"exact"}],"termid":"MONDO:0037736","xrefs":{"Monarch":{"xref_id":"0037736"}}}


id: GO:0032242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleoside transport","termid":"GO:0032242"}


id: MONDO:0850122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"solid adenocarcinoma with mucin production","secondary_identifiers":["DOID:0080306"],"termid":"MONDO:0850122","xrefs":{"Monarch":{"xref_id":"0850122"}}}


id: MONDO:0009990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Revesz syndrome is a rare severe phenotypic variant of dyskeratosis congenita (DC) with an onset in early childhood, characterized by features of DC (e.g. skin hyper/hypopigmentation, nail dystrophy, oral leukoplakia, high risk of bone marrow failure (BMF) and cancer, developmental delay sparse and fine hair) in conjunction with bilateral exudative retinopathy, and intracranial calcifications.","definition_xrefs":["Orphanet:3088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"Revesz syndrome","secondary_identifiers":["OMIM:268130","MESH:C538371","MEDGEN:231230","GARD:4695","SCTID:723512008","UMLS:C1327916","NCIT:C152064","DOID:0070026"],"synonyms":[{"name":"DKCA5","type":"exact"},{"name":"Revesz syndrome","type":"exact"},{"name":"Revesz-DeBuse syndrome","type":"exact"},{"name":"dyskeratosis congenita with bilateral exudative retinopathy","type":"exact"},{"name":"dyskeratosis congenita, autosomal dominant 5","type":"exact"},{"name":"exudative retinopathy with bone marrow failure","type":"exact"},{"name":"retinopathy-anemia-central nervous system anomalies syndrome","type":"exact"}],"termid":"MONDO:0009990","xrefs":{"Monarch":{"xref_id":"0009990"}}}


id: PBO:0064329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastin 3","termid":"PBO:0064329"}


id: PATO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with medium-low wavelength of that portion of the visible spectrum lying between yellow and blue, evoked in the human observer by radiant energy with wavelengths of approximately 490 to 570 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"green","termid":"PATO:0000320"}


id: MONDO:0007128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annular erythema","secondary_identifiers":["MEDGEN:68608","UMLS:C0234906","MESH:C562461","OMIM:106500","SCTID:200920000","icd11.foundation:958930318"],"synonyms":[{"name":"annular erythema","type":"exact"}],"termid":"MONDO:0007128","xrefs":{"Monarch":{"xref_id":"0007128"}}}


id: GO:1902619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule minus-end binding.","definition_xrefs":["GOC:TermGenie","PMID:22939623","GO_REF:0000059","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule binding","termid":"GO:1904526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microtubule minus-end binding","termid":"GO:1902619"}


id: PR:O42654
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC10F6.15 gene.","definition_xrefs":["UniProtKB:O42654","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 134 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.15","synonyms":[{"name":"Spom972h-SPAC10F6.15","type":"exact"}],"termid":"PR:O42654"}


id: PBO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase Gln1","termid":"PBO:0001060"}


id: PBO:0028889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_multinucleate_cell","termid":"PBO:0028889"}


id: MONDO:0004071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma, without designation of benign or malignant, that is found in the supratentorial region. The infratentorial location is more common in children.","definition_xrefs":["NCIT:C4347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood astrocytic tumor","termid":"MONDO:0002505"},{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"cerebral astrocytoma","termid":"MONDO:0021633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood cerebral astrocytoma","secondary_identifiers":["UMLS:C0338070","MEDGEN:137828","DOID:7007","GARD:9302"],"synonyms":[{"name":"cerebral astrocytoma","type":"broad"},{"name":"cerebral astrocytoma, childhood","type":"related"},{"name":"childhood astrocytic tumor of telencephalon","type":"exact"},{"name":"childhood astrocytic tumour of telencephalon","type":"exact"},{"name":"childhood astrocytoma of cerebrum","type":"exact"},{"name":"childhood astrocytoma of the cerebrum","type":"exact"},{"name":"paediatric astrocytoma of cerebrum","type":"exact"},{"name":"paediatric astrocytoma of the cerebrum","type":"exact"},{"name":"paediatric cerebral astrocytoma","type":"exact"},{"name":"pediatric astrocytoma of cerebrum","type":"exact"},{"name":"pediatric astrocytoma of the cerebrum","type":"exact"},{"name":"pediatric cerebral astrocytoma","type":"exact"},{"name":"telencephalon childhood astrocytic tumor","type":"exact"},{"name":"telencephalon childhood astrocytic tumour","type":"exact"},{"name":"telencephalon juvenile astrocytoma","type":"exact"}],"termid":"MONDO:0004071","xrefs":{"Monarch":{"xref_id":"0004071"}}}


id: MONDO:0044696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome","secondary_identifiers":["Orphanet:500144","OMIM:617669","GARD:17923","UMLS:C5567229","MEDGEN:1798652"],"synonyms":[{"name":"PEBAS","type":"related"},{"name":"encephalopathy, progressive, early-onset, with brain atrophy and spasticity","type":"related"}],"termid":"MONDO:0044696","xrefs":{"Monarch":{"xref_id":"0044696"}}}


id: MONDO:0006074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma composed of malignant glandular cells and malignant squamous cells.","definition_xrefs":["NCIT:C3727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous carcinoma","secondary_identifiers":["MESH:D018196","icd11.foundation:1793155313","ICDO:8560/3","MEDGEN:104901","DOID:4830","SCTID:403902008","EFO:1000073","UMLS:C0206623"],"synonyms":[{"name":"adenosquamous carcinoma","type":"exact"},{"name":"adenosquamous carcinoma (morphologic abnormality)","type":"exact"},{"name":"adenosquamous cell carcinoma","type":"exact"},{"name":"carcinoma, adenosquamous, malignant","type":"exact"},{"name":"mixed adenocarcinoma and epidermoid carcinoma","type":"exact"},{"name":"mixed adenocarcinoma and epidermoid cell carcinoma","type":"exact"},{"name":"mixed adenocarcinoma and squamous carcinoma","type":"exact"},{"name":"mixed adenocarcinoma and squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006074","xrefs":{"Monarch":{"xref_id":"0006074"}}}


id: PBO:0084186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone E3 ligase, component of CORVET membrane tethering complex; peripheral vacuolar membrane protein required for protein trafficking and vacuole biogenesis; interacts with Pep7p; involved in ubiquitination and degradation of excess histones","termid":"PBO:0084186"}


id: PBO:0070270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 4","termid":"PBO:0070270"}


id: GO:0031586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the inositol 1,4,5-trisphosphate-sensitive calcium-release channel.","definition_xrefs":["GOC:signaling","GOC:mah","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity (obsolete GO:0031586)","synonyms":[{"name":"down regulation of IP3 receptor activity","type":"exact"},{"name":"down-regulation of IP3 receptor activity","type":"exact"},{"name":"downregulation of IP3 receptor activity","type":"exact"},{"name":"inhibition of IP3 receptor activity","type":"narrow"},{"name":"negative regulation of IP3 receptor activity","type":"related"},{"name":"negative regulation of inositol 1,4,5-trisphosphate receptor activity","type":"exact"}],"termid":"GO:0031586"}


id: PBO:0084922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monocarboxylate/proton symporter of the plasma membrane; transport activity is dependent on the pH gradient across the membrane; mediates high-affinity uptake of carbon sources lactate, pyuvate, and acetate, and also of the micronutrient selenite, whose structure mimics that of monocarboxylates; expression and localization are tightly regulated, with transcription repression, mRNA degradation, and protein endocytosis and degradation all occurring in the presence of glucose","termid":"PBO:0084922"}


id: PBO:0084131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexose transporter; capable of transporting a broad range of substrates including: glucose, fructose, mannose and galactose; polyol transporter that supports the growth on and uptake of xylitol with low affinity when overexpressed in a strain deleted for hexose family members; nearly identical in sequence to Hxt9p; has similarity to major facilitator superfamily (MFS) transporters; involved in pleiotropic drug resistance","termid":"PBO:0084131"}


id: GO:0005963
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular enzyme complex that catalyzes the removal of serine- or threonine-bound phosphate groups from a wide range of phosphoproteins, including a number of enzymes that have been phosphorylated under the action of a kinase.","definition_xrefs":["PMID:17517611","PMID:22343722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"magnesium-dependent protein serine/threonine phosphatase complex","termid":"GO:0005963"}


id: PBO:0003875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLTH domain","termid":"PBO:0003875"}


id: PBO:0088585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex arrestin related endocytic adaptor ubunit Vps26","termid":"PBO:0088585"}


id: GO:0035295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tube over time, from its initial formation to a mature structure. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues including lung and trachea, kidney, the mammary gland, the vascular system and the gastrointestinal and urinary-genital tracts.","definition_xrefs":["PMID:12526790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube development","termid":"GO:0035295"}


id: GO:0035671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an enone + NADPH + H+ = a ketone + NADP+.","definition_xrefs":["PMID:17945329","GOC:kad","PMID:19166903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"enone reductase activity","secondary_identifiers":["MetaCyc:RXN-12267"],"termid":"GO:0035671"}


id: GO:0015058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor-like module containing hormone receptor activity (obsolete GO:0015058)","synonyms":[{"name":"EGF-like module containing hormone receptor activity","type":"exact"},{"name":"Egr1 hormone receptor","type":"exact"},{"name":"epidermal growth factor-like module containing hormone receptor activity","type":"exact"}],"termid":"GO:0015058"}


id: PBO:0091307
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human Rab6","termid":"PBO:0091307"}


id: MONDO:0010481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Swelling involving the deep dermis, subcutaneous, or submucosal tissues, representing localized edema. Angioedema often occurs in the face, lips, tongue, and larynx.","definition_xrefs":["MESH:D000799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema","secondary_identifiers":["EFO:0005532","HP:0100665","UMLS:C0002994","ICD9:995.1","CSP:2716-7007","DOID:1558","MEDGEN:1543","SCTID:400075008"],"synonyms":[{"name":"Edemas, angioneurotic","type":"exact"},{"name":"Quincke edema","type":"exact"},{"name":"Quincke oedema","type":"exact"},{"name":"Quincke's edema","type":"exact"},{"name":"Quincke's oedema","type":"exact"},{"name":"Quinckes edema","type":"exact"},{"name":"Quinckes oedema","type":"exact"},{"name":"Urticarias, giant","type":"exact"},{"name":"angioedemas","type":"exact"},{"name":"angioneurotic Edemas","type":"exact"},{"name":"angioneurotic edema","type":"narrow"},{"name":"angioneurotic oedema","type":"narrow"},{"name":"edema, Quincke's","type":"exact"},{"name":"edema, angioneurotic","type":"exact"},{"name":"giant Urticarias","type":"exact"},{"name":"giant urticaria","type":"exact"},{"name":"urticaria, giant","type":"exact"}],"termid":"MONDO:0010481","xrefs":{"Monarch":{"xref_id":"0010481"}}}


id: PBO:0085279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal matrix protein with naturally active promoter; well-conserved in fungi; localized to peroxisomes under physiological growth conditions; levels of some amino acids are altered upon both knockout and overexpression, suggesting potential involvement of Pxp2p in amino acid metabolism or related cellular metabolic processes (needs further study); GFP-fusion protein displays inherent dual localization with large proportion localizing to cytosol","termid":"PBO:0085279"}


id: GO:1900541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fumonisin biosynthetic process","synonyms":[{"name":"fumonisin anabolism","type":"exact"},{"name":"fumonisin biosynthesis","type":"exact"},{"name":"fumonisin formation","type":"exact"},{"name":"fumonisin synthesis","type":"exact"}],"termid":"GO:1900541"}


id: GO:0015747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of urate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"urate transport","synonyms":[{"name":"urate transmembrane transport","type":"exact"},{"name":"uric acid transport","type":"exact"}],"termid":"GO:0015747"}


id: PBO:0057831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3149","termid":"PBO:0057831"}


id: GO:0072193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell in the ureter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"ureter smooth muscle development","termid":"GO:0072191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}


id: GO:0030341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the eliminative degradation of polysaccharides containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucuronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups.","definition_xrefs":["EC:4.2.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chondroitin AC lyase activity","synonyms":[{"name":"ChnAC","type":"related"},{"name":"chondroitin AC eliminase activity","type":"related"},{"name":"chondroitin lyase activity","type":"exact"},{"name":"chondroitin sulfate lyase activity","type":"related"},{"name":"chondroitinase AC","type":"related"},{"name":"chondroitinase activity","type":"broad"}],"termid":"GO:0030341"}


id: MONDO:0044304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild non-BH4-deficient hyperphenylalaninemia (HPANBH4) is an autosomal recessive disorder characterized by increased serum phenylalanine usually detected by newborn screening and associated with highly variable neurologic defects, including movement abnormalities and intellectual disability. Laboratory analysis shows dopamine and serotonin deficiencies in the cerebrospinal fluid, and normal BH4 metabolism. Evidence suggests that treatment with neurotransmitter precursors can lead to clinical improvement or even prevent the neurologic defects if started in infancy (summary by {1:Anikster et al., 2017}).","definition_xrefs":["OMIM:617384"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"phenylketonuria","termid":"MONDO:0009861"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperphenylalaninemia due to DNAJC12 deficiency","secondary_identifiers":["GARD:17950","UMLS:C4479270","MEDGEN:1391882","Orphanet:508523"],"synonyms":[{"name":"HPANBH4","type":"related"},{"name":"hyperphenylalaninemia due to DNAJC12 deficiency","type":"exact"},{"name":"hyperphenylalaninemia, mild, non-BH4-deficient","type":"related"}],"termid":"MONDO:0044304","xrefs":{"Monarch":{"xref_id":"0044304"}}}


id: PBO:0085612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA repair; related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair","termid":"PBO:0085612"}


id: PBO:0073963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 12","termid":"PBO:0073963"}


id: GO:2000833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of steroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"positively_regulates","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"}


id: PBO:0061014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nidogen 2","termid":"PBO:0061014"}


id: PATO:0002189
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The ease of distortion of the electron cloud of a molecular entity by an electric field.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electric polarizability","termid":"PATO:0002189"}


id: PBO:0005141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Psk1","termid":"PBO:0005141"}


id: PBO:0040397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit F","termid":"PBO:0040397"}


id: MOD:00301
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(N-acetylglucosamine-1-phosphoryl)-L-serine.","definition_xrefs":["PubMed:6438439","PubMed:6993483","Unimod:428","DeltaMass:0","RESID:AA0296","PubMed:8631906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"glycosylphosphorylated residue","termid":"MOD:01804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(N-acetylglucosamine-1-phosphoryl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[([(2-acetamido-2-deoxy-alpha-D-glucopyranosyl)oxy][hydroxy]phosphoryl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GalNAcP) serine","type":"exact"},{"name":"N-acetylglucosamine-1-phosphoryl","type":"related"},{"name":"O-(N-acetylglucosamine-1-phosphoryl)-L-serine","type":"exact"},{"name":"O-GlcNAc-1-phosphorylation (of Serine)","type":"exact"},{"name":"O-beta(N-acetyl-glucosamine-alpha1-phosphate)serine","type":"exact"},{"name":"O3-(N-acetylglucosamine-1-phosphoryl)-L-serine","type":"exact"},{"name":"O3-L-serine 2-(acetylamino)-2-deoxy-D-glucopyranose 1-phosphodiester","type":"exact"},{"name":"PhosphoHexNAc","type":"related"}],"termid":"MOD:00301"}


id: GO:0061648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the replacement of an existing tooth with another tooth.","definition_xrefs":["PMID:15170864","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth replacement","termid":"GO:0061648"}


id: GO:0061157
data:
  {"annotated_genes":["SJAG_02622","SJAG_03113","SJAG_00285","SJAG_05322","SJAG_03157","SJAG_02540","SJAG_01944","SJAG_04118","SJAG_03883","SJAG_04153","SJAG_04825","SJAG_02213","SJAG_04084","SJAG_03179","SJAG_01818","SJAG_04818","SJAG_02239","SJAG_00759","SJAG_04880","SJAG_03597","SJAG_02808","SJAG_00966","SJAG_03876","SJAG_04006","SJAG_01625","SJAG_01521","SJAG_04824","SJAG_01191","SJAG_02383","SJAG_00854","SJAG_00686","SJAG_02370","SJAG_01910","SJAG_02036","SJAG_01053","SJAG_04407","SJAG_03745","SJAG_00343","SJAG_04321","SJAG_00391","SJAG_05694","SJAG_04350","SJAG_05010","SJAG_16457","SJAG_04427"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117235],"is_not":false,"summary":null,"term":"GO:0061157"},{"annotations":[117437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[111143,112608,90756,105296,109037,109086],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[90869],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[103578,95112,104423,117425,106616,105626,92274,96442,91449,115019,114578,101264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[88904,97335,99117,112457,97249,110212,114279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[91796,108354,94704,89990,92604,115738,97710,88994,91133,116297,114791,93534,91701,102207,91193],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[90870],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[89991,116359,94821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"}]},"cv_name":"biological_process","definition":"Any process that decreases the stability of an mRNA molecule, making it more vulnerable to degradative processes. Messenger RNA is the intermediate molecule between DNA and protein. It includes UTR and coding sequences. It does not contain introns.","definition_xrefs":["GOC:jh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"is_a","term_name":"RNA destabilization","termid":"GO:0050779"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02622":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03597":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mRNA destabilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061157","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0060212":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:1990074":null}}


id: GO:0100027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates cell separation after cytokinesis.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell separation after cytokinesis by transcription from RNA polymerase II promoter (obsolete GO:0100027)","termid":"GO:0100027"}


id: GO:0051740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene binding","termid":"GO:0072328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ethylene binding","synonyms":[{"name":"ethene binding","type":"exact"}],"termid":"GO:0051740"}


id: PBO:0058973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malectin pseudogene 1","termid":"PBO:0058973"}


id: PBO:0048755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLYCTK antisense RNA 1","termid":"PBO:0048755"}


id: PBO:0060761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 5","termid":"PBO:0060761"}


id: PBO:0114139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family 3, Ghf3","termid":"PBO:0114139"}


id: PBO:0036205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0036205"}


id: GO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tellurite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tellurite transport","termid":"GO:0015710"}


id: PBO:0112605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein, implicated in transmembrane transport or endocytosis","termid":"PBO:0112605"}


id: MONDO:0030453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 97","secondary_identifiers":["OMIM:619561","UMLS:C5561999","DOID:0070383","MEDGEN:1794209"],"synonyms":[{"name":"DEE97","type":"exact"}],"termid":"MONDO:0030453","xrefs":{"Monarch":{"xref_id":"0030453"}}}


id: MONDO:1010721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any deficiency in fumarylacetoacetate hydrolase that occurs in rabbits due to a mutation in the FAH gene created by genetic engineering or gene editing. Fumarylacetoacetate hydrolase is an enzyme that catalyzes the last step of tyrosine metabolism.","definition_xrefs":["OMIA:002078-9986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinemia type 1, FAH-related, rabbit","synonyms":[{"name":"tyrosinemia type I, rabbit","type":"related"}],"termid":"MONDO:1010721","xrefs":{"Monarch":{"xref_id":"1010721"}}}


id: SO:0001610
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence at the C terminus deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"CDS_three_prime_extension","termid":"SO:0002229"},{"relation_name":"is_a","term_name":"elongated_polypeptide","termid":"SO:0001609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide_C_terminal","synonyms":[{"name":"elongated polypeptide C terminal","type":"exact"}],"termid":"SO:0001610"}


id: PBO:0036372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh1 (predicted)","termid":"PBO:0036372"}


id: PBO:0066791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 90","termid":"PBO:0066791"}


id: PBO:0078565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 49D2","termid":"PBO:0078565"}


id: GO:0014702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the sarcoplasmic reticulum membrane that contains calcium pumps and is devoted to calcium uptake. The free sarcoplasmic reticulum membrane consists of the longitudinal sarcoplasmic reticulum membrane and the non-junctional region of the terminal cisterna membrane.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005789","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"free sarcoplasmic reticulum membrane","termid":"GO:0014702"}


id: GO:0048401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate specification","termid":"GO:0048399"},{"relation_name":"negatively_regulates","term_name":"intermediate mesodermal cell fate specification","termid":"GO:0048398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate mesodermal cell fate specification","synonyms":[{"name":"down regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"downregulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"inhibition of intermediate mesodermal cell fate specification","type":"narrow"}],"termid":"GO:0048401"}


id: PBO:0052455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 6","termid":"PBO:0052455"}


id: MONDO:0013282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-1-antitrypsin deficiency is a hereditary disease that develops in adulthood and is characterized by chronic liver disorders (cirrhosis), respiratory disorders (emphysema), and rarely panniculitis.","definition_xrefs":["Orphanet:60"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"plasma protein metabolism disease","termid":"MONDO:0002273"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"alpha 1-antitrypsin deficiency","secondary_identifiers":["icd11.foundation:824872160","NORD:754","NANDO:1200755","MESH:D019896","NANDO:2200611","UMLS:C0221757","NANDO:2100174","NCIT:C84397","GARD:5784","ICD9:273.4","DOID:13372","SCTID:30188007","MedDRA:10001806","OMIM:613490","ICD10CM:E88.01","MEDGEN:67461"],"synonyms":[{"name":"A-1ATD","type":"exact"},{"name":"A1AD","type":"exact"},{"name":"A1AT deficiency","type":"related"},{"name":"A1ATD","type":"related"},{"name":"AAT deficiency","type":"exact"},{"name":"AATD","type":"related"},{"name":"ALPHA-1-antitrypsin deficiency","type":"related"},{"name":"Alpha 1 antitrypsin deficiency","type":"related"},{"name":"Alpha-1 Antitrypsin Deficiency","type":"exact"},{"name":"Alpha-1 antitrypsin deficiency","type":"related"},{"name":"alpha 1-antitrypsin deficiency","type":"exact"},{"name":"alpha-1-antitrypsin deficiency","type":"related"},{"name":"deficiency in Alpa-1-proteinase inhibitor","type":"exact"},{"name":"emphysema due to AAT deficiency","type":"exact"},{"name":"emphysema-cirrhosis, due to AAT deficiency","type":"exact"},{"name":"hemorrhagic diathesis due to antithrombin pittsburgh","type":"exact"}],"termid":"MONDO:0013282","xrefs":{"Monarch":{"xref_id":"0013282"}}}


id: PBO:0034427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_localization_(obsolete_requires_localization)","termid":"PBO:0034427"}


id: PBO:0017467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-functionally_related_to","termid":"PBO:0017467"}


id: GO:0033997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(2->1)-beta-D-fructosyl](n) = [(2->1)-beta-D-fructosyl](n-1) + alpha-D-fructofuranose-beta-D-fructofuranose 1,2':1,2'-dianhydride. This reaction is the production of alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,1'-dianhydride (DFA I) by successively eliminating the diminishing (2->1)-beta-D-fructan (inulin) chain from the terminal D-fructosyl-D-fructosyl disaccharide.","definition_xrefs":["EC:4.2.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inulin fructotransferase (DFA-I-forming) activity","secondary_identifiers":["MetaCyc:4.2.2.17-RXN"],"synonyms":[{"name":"2,1-beta-D-fructan lyase (alpha-D-fructofuranose-beta-D-fructofuranose-1,2':2,1'-dianhydride-forming) activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (1,2':1',2-dianhydride-forming) activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (forming alpha-D-fructofuranose beta-D-fructofuranose 1,2':1',2-dianhydride) activity","type":"related"},{"name":"inulin fructotransferase (DFA-I-producing) activity","type":"related"},{"name":"inulin fructotransferase (depolymerizing, difructofuranose-1,2':2',1-dianhydride-forming) activity","type":"related"}],"termid":"GO:0033997"}


id: GO:2000363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prostaglandin-E synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isomerase activity","termid":"GO:0010912"},{"relation_name":"is_a","term_name":"regulation of prostaglandin-E synthase activity","termid":"GO:2000361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin-E synthase activity","synonyms":[{"name":"positive regulation of (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"exact"},{"name":"positive regulation of PGE isomerase activity","type":"exact"},{"name":"positive regulation of PGE2 isomerase activity","type":"exact"},{"name":"positive regulation of PGH-PGE isomerase activity","type":"exact"},{"name":"positive regulation of Prostaglandin-H(2) E-isomerase activity","type":"exact"},{"name":"positive regulation of endoperoxide isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin H-E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin R-prostaglandin E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin endoperoxide E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin endoperoxide E2 isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin-H2 E-isomerase activity","type":"exact"}],"termid":"GO:2000363"}


id: GO:0070878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a primary microRNA (pri-miRNA) transcript, an RNA molecule that is processed into a short hairpin-shaped structure called a pre-miRNA and finally into a functional miRNA. Both double-stranded and single-stranded regions of a pri-miRNA are required for binding.","definition_xrefs":["PMID:15574589","PMID:15531877","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"primary miRNA binding","synonyms":[{"name":"pri-miRNA binding","type":"exact"},{"name":"primary microRNA binding","type":"exact"}],"termid":"GO:0070878"}


id: SO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a gene, that has no other route in the ontology back to region. This concept is necessary for logical inference as these parts must have the properties of region. It also allows us to associate all the parts of genes with a gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000050 gene_part (obsolete SO:0000050)","termid":"SO:0000050"}


id: PBO:0031005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level","termid":"PBO:0031005"}


id: FYPO:0001028
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in any part of interphase, under conditions where arrest is not a normal occurrence.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal mitotic cell cycle arrest in interphase","type":"exact"},{"name":"abnormal mitotic interphase cell cycle arrest","type":"exact"}],"termid":"FYPO:0001028","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0054140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1506","termid":"PBO:0054140"}


id: PBO:0070674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 45","termid":"PBO:0070674"}


id: MONDO:0035124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"linear hypopigmentation and craniofacial asymmetry with acral, ocular and brain anomalies","secondary_identifiers":["MEDGEN:1806249","Orphanet:589608","UMLS:C5680313","GARD:22358"],"termid":"MONDO:0035124","xrefs":{"Monarch":{"xref_id":"0035124"}}}


id: PBO:0058586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6719","termid":"PBO:0058586"}


id: PBO:0108967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIMAP1 family member D","termid":"PBO:0108967"}


id: GO:0052353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont carbohydrate (obsolete GO:0052353)","termid":"GO:0052353"}


id: PBO:0027976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_at_protein_coding_gene","termid":"PBO:0027976"}


id: PBO:0028735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_L-ergothioneine_level_during_vegetative_growth","termid":"PBO:0028735"}


id: PBO:0091699
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human Sgt1","termid":"PBO:0091699"}


id: GO:0018266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-aspartic acid ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a aspartyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0159"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor biosynthetic process via N-aspartyl-glycosylphosphatidylinositolethanolamine (obsolete GO:0018266)","termid":"GO:0018266"}


id: PBO:0091600
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cor-C? is nse6","termid":"PBO:0091600"}


id: PBO:0041252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf167 antisense RNA 1","termid":"PBO:0041252"}


id: GO:0036460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stress acting at the cell envelope.","definition_xrefs":["PMID:15882407","PMID:15101969","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cell envelope stress","synonyms":[{"name":"envelope stress response","type":"exact"}],"termid":"GO:0036460"}


id: PBO:0014619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin-dependent kinase kinase 2","termid":"PBO:0014619"}


id: GO:1905538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a polysome.","definition_xrefs":["PMID:18426977","GOC:bc","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete polysome binding (obsolete GO:1905538)","synonyms":[{"name":"polyribosome binding","type":"exact"}],"termid":"GO:1905538"}


id: MONDO:0005890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder that is characterized by bone cysts and fractures, resulting from hyperparathyroidism.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone resorption disease","termid":"MONDO:0000837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteitis fibrosa","secondary_identifiers":["DOID:3341","MEDGEN:14529","UMLS:C0029405","SCTID:84727000","NCIT:C34875","EFO:0007413","MESH:D010002"],"synonyms":[{"name":"Von Recklinghausen disease of Bone","type":"exact"},{"name":"Von Recklinghausen's bone disease","type":"exact"},{"name":"Von Recklinghausen's disease of Bone","type":"exact"},{"name":"hyperparathyroid bone disease","type":"exact"},{"name":"osteitis fibrosa cystica","type":"exact"},{"name":"osteitis fibrosa cystica generalisata","type":"exact"}],"termid":"MONDO:0005890","xrefs":{"Monarch":{"xref_id":"0005890"}}}


id: GO:0070076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the removal of a methyl group from a lysine residue.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone lysine demethylation (obsolete GO:0070076)","termid":"GO:0070076"}


id: FYPO:0003996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA primase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA primase activity","termid":"FYPO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000661","FYPO:0000294","FYPO:0000293","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000002"],"is_obsolete":false,"name":"abolished DNA primase activity","synonyms":[{"name":"DNA primase activity abolished","type":"exact"}],"termid":"FYPO:0003996"}


id: MONDO:0044252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 6 (obsolete MONDO:0044252)","secondary_identifiers":["OMIM:210750"],"synonyms":[{"name":"SHEP6","type":"related"},{"name":"skin/hair/eye pigmentation 6, Blond/Brown hair","type":"related"},{"name":"skin/hair/eye pigmentation 6, blond/brown hair","type":"exact"},{"name":"skin/hair/eye pigmentation 6, blue/Green eyes","type":"related"},{"name":"skin/hair/eye pigmentation 6, blue/green eyes","type":"exact"},{"name":"skin/hair/eye pigmentation, variation IN, 6","type":"related"}],"termid":"MONDO:0044252","xrefs":{"Monarch":{"xref_id":"0044252"}}}


id: GO:0052623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delta2-isopentenyl diphosphate + ADP = diphosphate + N6-(delta(2)-isopentenyl)adenosine 5'-diphosphate.","definition_xrefs":["MetaCyc:RXN-4305"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP dimethylallyltransferase activity (obsolete GO:0052623)","synonyms":[{"name":"2-isopentenyl-diphosphate:ADP 2-isopentenyltransferase activity","type":"exact"},{"name":"ADP isopentenyltransferase activity","type":"exact"}],"termid":"GO:0052623"}


id: PATO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluid flow that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fluid flow rate","termid":"PATO:0002243"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fluid flow","synonyms":[{"name":"high flow","type":"exact"}],"termid":"PATO:0001839"}


id: PBO:0052613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 5","termid":"PBO:0052613"}


id: PBO:0082363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-specific subunit of phosphatidylinositol 3-kinase complex I; Atg14p targets complex I to the phagophore assembly site (PAS); required for localizing additional ATG proteins to the PAS; required for overflow degradation of misfolded proteins when ERAD is saturated; homolog of human Barkor; other members are Vps34, Vps15, and Vps30p","termid":"PBO:0082363"}


id: PBO:0036367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in clearing protein aggregates (predicted)","termid":"PBO:0036367"}


id: PBO:0058053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4274","termid":"PBO:0058053"}


id: FYPO:0005303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is elongated during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated vegetative cell during cellular response to UV (obsolete FYPO:0005303)","synonyms":[{"name":"elongated cell during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated vegetative cell during cellular response to UV","type":"exact"},{"name":"elongated vegetative cell during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"elongated vegetative cell during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005303"}


id: GO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (indol-3-yl)acetaldehyde oxime = (indol-3-yl)acetonitrile + H2O.","definition_xrefs":["RHEA:23156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indoleacetaldoxime dehydratase activity","secondary_identifiers":["EC:4.8.1.3","KEGG_REACTION:R04093","MetaCyc:RXN-19838"],"synonyms":[{"name":"(indol-3-yl)acetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"3-indoleacetaldoxime hydro-lyase activity","type":"exact"},{"name":"indole-3-acetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"indole-3-acetaldoxime hydro-lyase activity","type":"exact"},{"name":"indoleacetaldoxime hydro-lyase activity","type":"exact"}],"termid":"GO:0047720"}


id: PBO:0069851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1137, pseudogene","termid":"PBO:0069851"}


id: PR:P87157
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of Myb protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-binding protein C25H2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.16c","secondary_identifiers":["UniProtKB:P87157"],"synonyms":[{"name":"Spom972h-TOM1","type":"exact"}],"termid":"PR:P87157"}


id: MONDO:0014354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the WASHC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 43","secondary_identifiers":["MEDGEN:862823","UMLS:C4014386","DOID:0081207","OMIM:615817","GARD:22565"],"synonyms":[{"name":"MRT43","type":"related"},{"name":"WASHC4 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in WASHC4","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 43","type":"exact"},{"name":"intellectual disability, autosomal recessive 43","type":"exact"},{"name":"intellectual disability, autosomal recessive type 43","type":"exact"},{"name":"mental retardation, autosomal recessive 43","type":"related"},{"name":"mental retardation, autosomal recessive type 43","type":"exact"}],"termid":"MONDO:0014354","xrefs":{"Monarch":{"xref_id":"0014354"}}}


id: GO:0006734
data:
  {"annotated_genes":["SJAG_01539","SJAG_06621","SJAG_02107","SJAG_02369","SJAG_00605","SJAG_00409","SJAG_02135","SJAG_01310","SJAG_02945","SJAG_00461","SJAG_06622","SJAG_03828","SJAG_00027","SJAG_03091","SJAG_03373","SJAG_02009","SJAG_02796","SJAG_04192","SJAG_04152","SJAG_04334","SJAG_00839","SJAG_03660","SJAG_03903","SJAG_04495","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104276],"is_not":false,"summary":null,"term":"GO:0006734"},{"annotations":[97188,108542,108543,108077,108546,108076,104986,104617,102818,104618,108079,108080,108082,108541,102562,104616,108540,115486,108545,94210,108081,108078,108544,103641,104987,93723,97466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[111991,93176,95914,105662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving reduced nicotinamide adenine dinucleotide (NADH), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["ISBN:0618254153","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01539":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04152":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"NADH metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD (reduced) metabolic process","type":"exact"},{"name":"NAD (reduced) metabolism","type":"exact"},{"name":"NADH metabolism","type":"exact"},{"name":"reduced NAD metabolic process","type":"exact"},{"name":"reduced NAD metabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0006734","terms_by_termid":{"GO:0006116":null,"GO:0006734":null,"GO:0061621":null}}


id: GO:1904030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:als","PMID:22995177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein kinase activity","termid":"GO:1904029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein kinase activity","synonyms":[{"name":"down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"inhibition of cyclin-dependent protein kinase activity","type":"exact"}],"termid":"GO:1904030"}


id: GO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein serine/threonine phosphatase signaling protein activity (obsolete GO:0005081)","synonyms":[{"name":"receptor signaling protein serine/threonine phosphatase signaling protein activity","type":"exact"},{"name":"receptor signalling protein serine/threonine phosphatase signalling protein activity","type":"exact"}],"termid":"GO:0005081"}


id: PBO:0072686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNDC3A antisense RNA 1","termid":"PBO:0072686"}


id: MONDO:0020136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurodegenerative disease with dementia (obsolete MONDO:0020136)","secondary_identifiers":["Orphanet:98534"],"termid":"MONDO:0020136","xrefs":{"Monarch":{"xref_id":"0020136"}}}


id: GO:0052199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052199)","synonyms":[{"name":"down regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of enzyme activity in other organism","type":"exact"},{"name":"inhibition of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of enzyme activity in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052199"}


id: GO:0046755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral process by which enveloped viruses acquire a host-derived membrane enriched in viral proteins to form their external envelope. The process starts when nucleocapsids, assembled or in the process of being built, induce formation of a membrane curvature in the host plasma or organelle membrane and wrap up in the forming bud. The process ends when the bud is eventually pinched off by membrane scission to release the enveloped particle into the lumenal or extracellular space.","definition_xrefs":["VZ:1947","ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding","secondary_identifiers":["GO:0046744"],"synonyms":[{"name":"viral capsid envelopment","type":"related"},{"name":"virion budding","type":"narrow"},{"name":"virus budding","type":"related"}],"termid":"GO:0046755"}


id: PBO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenine_import","termid":"PBO:0030839"}


id: GO:0033051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aminophosphonates, phosphonic acid derivatives that contain an amino group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminophosphonate metabolic process","secondary_identifiers":["KEGG_PATHWAY:map00440"],"synonyms":[{"name":"aminophosphonate metabolism","type":"exact"}],"termid":"GO:0033051"}


id: PBO:0040545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 3","termid":"PBO:0040545"}


id: PBHQ:004
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","direct_ancestors":[{"relation_name":"is_a","term_name":"has_qualifier_range","termid":"PBHQ:001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","termid":"PBHQ:004"}


id: PBO:0041377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 54","termid":"PBO:0041377"}


id: PBO:0004974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 9","termid":"PBO:0004974"}


id: PBO:0045684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 4","termid":"PBO:0045684"}


id: PBO:0043596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL25A1 divergent transcript","termid":"PBO:0043596"}


id: PBO:0040296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase plasma membrane Ca2+ transporting 1","termid":"PBO:0040296"}


id: PR:O13800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdl1 gene.","definition_xrefs":["UniProtKB:O13800","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rdl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.03c","synonyms":[{"name":"RAD51D-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rdl1","type":"exact"}],"termid":"PR:O13800"}


id: PBO:0090912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II and III complex Rab GEF subunit Bet5","termid":"PBO:0090912"}


id: PBO:0030739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_nitrogen_starvation","termid":"PBO:0030739"}


id: PATO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000887 relative litter size value (obsolete PATO:0000887)","termid":"PATO:0000887"}


id: PBO:0089958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ragulator complex Rag GEF subunit","termid":"PBO:0089958"}


id: GO:0103042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-L-threonine = glycolaldehyde + glycine.","definition_xrefs":["GOC:pz","RHEA:28779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-L-threonine aldolase activity","secondary_identifiers":["MetaCyc:RXN0-6563"],"termid":"GO:0103042"}


id: PATO:0001393
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing an integral multiple of the monoploid number, possibly excluding the sex-determining chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Euploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ploidy","termid":"PATO:0001374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euploid","termid":"PATO:0001393"}


id: GO:0019983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-9.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-9 binding","synonyms":[{"name":"IL-9 binding","type":"exact"}],"termid":"GO:0019983"}


id: PBO:0056896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor 1","termid":"PBO:0056896"}


id: PBO:0067977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 279","termid":"PBO:0067977"}


id: MONDO:0013667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myelodysplastic syndrome (obsolete MONDO:0013667)","termid":"MONDO:0013667","xrefs":{"Monarch":{"xref_id":"0013667"}}}


id: GO:0003027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by the action of chemoreceptors found in the carotid bodies and their resultant modulation of the vasomotor center. Chemoreceptors respond to oxygen, carbon dioxide and hydrogen ions.","definition_xrefs":["GOC:tb","GOC:mtg_cardio","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signaling","synonyms":[{"name":"carotid body chemoreceptor regulation of systemic arterial blood pressure","type":"exact"},{"name":"carotid body chemoreceptor response to lowering of systemic arterial blood pressure","type":"exact"},{"name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signalling","type":"exact"},{"name":"vagal reflex","type":"broad"}],"termid":"GO:0003027"}


id: PBO:0054869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2283","termid":"PBO:0054869"}


id: PBO:0042344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD81 molecule","termid":"PBO:0042344"}


id: PR:Q10135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsd2 gene.","definition_xrefs":["UniProtKB:Q10135","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine-specific histone demethylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.02","synonyms":[{"name":"Spom972h-lsd2","type":"exact"}],"termid":"PR:Q10135"}


id: GO:0006524
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alanine, 2-aminopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"alanine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alanine breakdown","type":"exact"},{"name":"alanine catabolism","type":"exact"},{"name":"alanine degradation","type":"exact"}],"termid":"GO:0006524","terms_by_termid":{"GO:0042853":null}}


id: PBO:0025473
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase deficiency","termid":"PBO:0025473"}


id: MONDO:0957218
data:
  {"annotated_genes":["SJAG_01522"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85746],"is_not":false,"summary":null,"term":"MONDO:0957218"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly and speech delay, with or without brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830413","MEDGEN:1841049","OMIM:620317"],"termid":"MONDO:0957218","terms_by_termid":{"MONDO:0957218":null},"xrefs":{"Monarch":{"xref_id":"0957218"}}}


id: GO:0004369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + O2 = glycerone phosphate + H2O2.","definition_xrefs":["RHEA:18369","EC:1.1.3.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycerol-3-phosphate oxidase activity","secondary_identifiers":["KEGG_REACTION:R00846","MetaCyc:GLYCEROL-3-PHOSPHATE-OXIDASE-RXN"],"synonyms":[{"name":"L-alpha-glycerol-3-phosphate oxidase activity","type":"related"},{"name":"L-alpha-glycerophosphate oxidase activity","type":"related"},{"name":"alpha-glycerophosphate oxidase activity","type":"related"},{"name":"glycerol phosphate oxidase activity","type":"related"},{"name":"glycerol-1-phosphate oxidase activity","type":"related"},{"name":"sn-glycerol-3-phosphate:oxygen 2-oxidoreductase activity","type":"related"}],"termid":"GO:0004369"}


id: PBO:0079743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 10","termid":"PBO:0079743"}


id: PBO:0050781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1E","termid":"PBO:0050781"}


id: MONDO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of gonococcal seminal vesiculitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonococcal seminal vesiculitis","termid":"MONDO:0001027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seminal vesicle chronic gonorrhea","secondary_identifiers":["ICD9:098.34","MEDGEN:509202","UMLS:C0153205","SCTID:23975003","DOID:10399"],"synonyms":[{"name":"chronic gonococcal seminal vesiculitis","type":"exact"},{"name":"gonococcal seminal vesiculitis, chronic","type":"exact"}],"termid":"MONDO:0001025","xrefs":{"Monarch":{"xref_id":"0001025"}}}


id: PBO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer associated 1","termid":"PBO:0043600"}


id: MONDO:0013988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart defects, multiple types","termid":"MONDO:0000119"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart defects, multiple types, 3","secondary_identifiers":["MEDGEN:767108","OMIM:614954","UMLS:C3554194"],"synonyms":[{"name":"CHTD3","type":"exact"},{"name":"congenital heart defects, multiple types, 3","type":"exact"},{"name":"congenital heart defects, multiple types, with Cardiac rhythm and conduction disturbances","type":"related"}],"termid":"MONDO:0013988","xrefs":{"Monarch":{"xref_id":"0013988"}}}


id: GO:1990779
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane signaling receptor complex found exclusively on platelets. Involved in haemostasis and thrombosis where it aids blood coagulation.","definition_xrefs":["PMID:25297919","PMID:23336709","GOC:bhm","PMID:1730602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein complex","termid":"GO:0090665"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glycoprotein Ib-IX-V complex","synonyms":[{"name":"CD42","type":"exact"},{"name":"GPIb-IX-V complex","type":"exact"},{"name":"GPIb-V-IX complex","type":"exact"}],"termid":"GO:1990779"}


id: GO:0097633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the phagophore assembly site membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of phagophore assembly site membrane (obsolete GO:0097633)","synonyms":[{"name":"intrinsic to phagophore assembly site membrane","type":"narrow"}],"termid":"GO:0097633"}


id: PBO:0059192
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member G","termid":"PBO:0059192"}


id: MONDO:0006480
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An undifferentiated pleomorphic sarcoma characterized by the presence of numerous inflammatory cells.","definition_xrefs":["NCIT:C6497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated pleomorphic sarcoma","termid":"MONDO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated pleomorphic sarcoma, inflammatory variant","secondary_identifiers":["MEDGEN:235211","EFO:1000608","DOID:6192","UMLS:C1334180"],"synonyms":[{"name":"Xanthosarcoma","type":"exact"},{"name":"inflammatory MFH","type":"exact"},{"name":"inflammatory malignant fibrous histiocytoma","type":"exact"},{"name":"malignant xanthogranuloma","type":"exact"},{"name":"undifferentiated pleomorphic sarcoma, inflammatory variant","type":"exact"}],"termid":"MONDO:0006480","xrefs":{"Monarch":{"xref_id":"0006480"}}}


id: PBO:0072619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 3","termid":"PBO:0072619"}


id: GO:0019725
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id: GO:0055103
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  {"annotated_genes":["SJAG_03494","SJAG_00177"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990609"},{"annotations":[104899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180016"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a ligase.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00177":null,"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"ligase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055103","terms_by_termid":{"GO:0180016":null,"GO:1990609":null}}


id: PBO:0044789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 1B","termid":"PBO:0044789"}


id: GO:1902541
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A micropinocytosis which involves another organism.","definition_xrefs":["GOC:TermGenie","GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism micropinocytosis (obsolete GO:1902541)","termid":"GO:1902541"}


id: GO:0061061
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a muscle structure over time, from its formation to its mature state. Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle structure development","termid":"GO:0061061"}


id: PBO:0056485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 2","termid":"PBO:0056485"}


id: MONDO:0002657
data:
  {"annotated_genes":["SJAG_02426","SJAG_00757","SJAG_04502","SJAG_02460","SJAG_04394","SJAG_01410","SJAG_03720","SJAG_03453","SJAG_04206","SJAG_00079"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86544,85426,85423,86545,85422,85425,86547,85424,86543,86546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"}]},"cv_name":"mondo","definition":"A disease involving the breast.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00757":null,"SJAG_01410":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_03453":null,"SJAG_03720":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04502":null},"genotype_count":0,"is_obsolete":false,"name":"breast disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:N60-N65","SCTID:79604008","MESH:D001941","ICD9:610-612.99","NCIT:C26709","MEDGEN:652","UMLS:C0006145","ICD9:611.8","ICD9:611.9","DOID:3463","EFO:0009483"],"synonyms":[{"name":"breast disease","type":"exact"},{"name":"breast disease or disorder","type":"exact"},{"name":"breast diseases","type":"exact"},{"name":"breast disorder","type":"exact"},{"name":"disease of breast","type":"exact"},{"name":"disease or disorder of breast","type":"exact"},{"name":"disorder of breast","type":"exact"}],"termid":"MONDO:0002657","terms_by_termid":{"MONDO:0016419":null},"xrefs":{"Monarch":{"xref_id":"0002657"}}}


id: PBO:0047023
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A26","termid":"PBO:0047023"}


id: MONDO:0008887
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic bronchiectasis","termid":"MONDO:0018956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis with or without elevated sweat chloride 1","secondary_identifiers":["OMIM:211400","UMLS:C2749757","MEDGEN:440868","GARD:18054","DOID:0080526","MESH:C567618"],"synonyms":[{"name":"BESC1","type":"related"},{"name":"bronchiectasis with or without elevated sweat chloride 1","type":"exact"},{"name":"bronchiectasis with or without elevated sweat chloride 1, modifier of","type":"exact"},{"name":"bronchiectasis with or without elevated sweat chloride type 1","type":"exact"},{"name":"cystic fibrosis-like syndrome","type":"related"}],"termid":"MONDO:0008887","xrefs":{"Monarch":{"xref_id":"0008887"}}}


id: MOD:01771
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The farnesyl cation protein modification reporter fragment produced by fragmentation of some farnesyl modified residues.","definition_xrefs":["PubMed:18688235","PubMed:15609361"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"farnesylated residue","termid":"MOD:00437"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl reporter fragment","synonyms":[{"name":"(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ylium","type":"exact"},{"name":"Farn+","type":"exact"},{"name":"farnesyl cation","type":"exact"}],"termid":"MOD:01771"}


id: PBO:0003004
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DIPSY family","termid":"PBO:0003004"}


id: GO:0062150
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id: GO:0090586
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id: PBO:0016526
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id: MONDO:0001869
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the paraurethral gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"vulva cancer","termid":"MONDO:0001528"},{"relation_name":"is_a","term_name":"paraurethral gland neoplasm","termid":"MONDO:0002219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paraurethral gland cancer","secondary_identifiers":["ICD9:189.4","MEDGEN:509343","SCTID:363460002","UMLS:C0153621","DOID:14059"],"synonyms":[{"name":"cancer of paraurethral gland","type":"exact"},{"name":"malignant neoplasm of paraurethral gland","type":"exact"},{"name":"malignant paraurethral gland neoplasm","type":"exact"},{"name":"malignant tumor of paraurethral gland","type":"exact"},{"name":"malignant tumor of the paraurethral gland","type":"exact"},{"name":"malignant tumour of paraurethral gland","type":"exact"},{"name":"malignant tumour of the paraurethral gland","type":"exact"},{"name":"paraurethral gland cancer","type":"exact"}],"termid":"MONDO:0001869","xrefs":{"Monarch":{"xref_id":"0001869"}}}


id: GO:0042391
data:
  {"annotated_genes":["SJAG_01541","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88721,95934],"is_not":false,"summary":null,"term":"GO:0042391"}]},"cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:mtg_cardio","GOC:jl","GOC:tb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane potential","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042391","terms_by_termid":{"GO:0042391":null}}


id: PBO:0003918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide mi 1","termid":"PBO:0003918"}


id: GO:0102409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: behenoyl-CoA + sn-glycerol 3-phosphate(2-) = coenzyme A + 2-docosanoyl-glycerol 3-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate C16:0-CoA acyl transferase activity (obsolete GO:0102409)","termid":"GO:0102409"}


id: MONDO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Optic disk bodies composed primarily of acid mucopolysaccharides that may produce pseudopapilledema (elevation of the optic disk without associated intracranial hypertension) and visual field deficits. Drusen may also occur in the retina (see retinal drusen). (Miller et al., Clinical Neuro-Ophthalmology, 4th ed, p355)","definition_xrefs":["MESH:D015594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic disk drusen","secondary_identifiers":["MEDGEN:14495","ICD9:377.21","DOID:13561","SCTID:33629003","UMLS:C0029128"],"synonyms":[{"name":"drusen of optic disc","type":"exact"},{"name":"drusen of optic disk","type":"exact"},{"name":"optic nerve head drusen","type":"exact"}],"termid":"MONDO:0001746","xrefs":{"Monarch":{"xref_id":"0001746"}}}


id: GO:0097685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell surface furrow (or groove) found on a dinoflagellate apex. It typically loops around the apex.","definition_xrefs":["GOC:at","PMID:20561119","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface furrow","termid":"GO:0097610"},{"relation_name":"part_of","term_name":"dinoflagellate epicone","termid":"GO:0097613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0009986"],"is_obsolete":false,"name":"dinoflagellate apical groove","synonyms":[{"name":"apical groove","type":"broad"}],"termid":"GO:0097685"}


id: PR:Q10098
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC15F9.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15F9.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15F9.01c","synonyms":[{"name":"Spom972h-SPAC15F9.01c","type":"exact"}],"termid":"PR:Q10098"}


id: PBO:0056416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF11 antisense RNA 1","termid":"PBO:0056416"}


id: GO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mercury (Hg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"},{"relation_name":"part_of","term_name":"detoxification of mercury ion","termid":"GO:0050787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0098754","GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mercury ion transport","synonyms":[{"name":"mercuric ion transport","type":"narrow"},{"name":"mercury transport","type":"exact"}],"termid":"GO:0015694"}


id: PBO:0016879
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat expansion SQRSQRS","termid":"PBO:0016879"}


id: PBO:0012603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 3, Pup3 (predicted)","termid":"PBO:0012603"}


id: PBO:0011062
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"approver_email","termid":"PBO:0011062"}


id: GO:1903629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of dUTP diphosphatase activity.","definition_xrefs":["PMID:1315924","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of dUTP diphosphatase activity (obsolete GO:1903629)","synonyms":[{"name":"activation of dUTP diphosphatase activity","type":"narrow"},{"name":"activation of dUTP nucleotidohydrolase activity","type":"narrow"},{"name":"activation of dUTP pyrophosphatase activity","type":"narrow"},{"name":"activation of dUTPase activity","type":"narrow"},{"name":"activation of deoxyuridine-triphosphatase activity","type":"narrow"},{"name":"activation of desoxyuridine 5'-triphosphatase activity","type":"narrow"},{"name":"activation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"narrow"},{"name":"positive regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"positive regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"positive regulation of dUTPase activity","type":"exact"},{"name":"positive regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"positive regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"positive regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"},{"name":"up regulation of dUTP diphosphatase activity","type":"exact"},{"name":"up regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"up regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"up regulation of dUTPase activity","type":"exact"},{"name":"up regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"up regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"up regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"},{"name":"up-regulation of dUTP diphosphatase activity","type":"exact"},{"name":"up-regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"up-regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"up-regulation of dUTPase activity","type":"exact"},{"name":"up-regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"up-regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"up-regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"},{"name":"upregulation of dUTP diphosphatase activity","type":"exact"},{"name":"upregulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"upregulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"upregulation of dUTPase activity","type":"exact"},{"name":"upregulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"upregulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"upregulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"}],"termid":"GO:1903629"}


id: PBO:0046935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member A","termid":"PBO:0046935"}


id: PBO:0034481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_hydroxyurea","termid":"PBO:0034481"}


id: GO:0021762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the substantia nigra over time from its initial formation until its mature state. The substantia nigra is the layer of gray substance that separates the posterior parts of the cerebral peduncles (tegmentum mesencephali) from the anterior parts; it normally includes a posterior compact part with many pigmented cells (pars compacta) and an anterior reticular part whose cells contain little pigment (pars reticularis).","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021","ISBN:0878937420","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substantia nigra development","termid":"GO:0021762"}


id: GO:1901917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exoribonuclease activity.","definition_xrefs":["PMID:22570495","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ribonuclease activity","termid":"GO:0060700"},{"relation_name":"is_a","term_name":"regulation of exonuclease activity","termid":"GO:1905777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of exoribonuclease activity","termid":"GO:1901917"}


id: GO:0097007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (EE)-geranyllinalool + NADPH + O2 = 4,8,12-trimethyl-1,3,7,11-tridecatetraene + NADP+ + 2 H2O. It is unknown whether this reaction proceeds by the direct release of the 4-carbon compound but-1-en-3-one, or whether the substrate is first degraded to C18-farnesylacetone and then cleaved to produce 4,8,12-trimethyl-1,3,7,11-tridecatetraene (TMTT) and acetone.","definition_xrefs":["GOC:kad","MetaCyc:RXN-8620","PMID:21088219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity","secondary_identifiers":["RHEA:13545"],"synonyms":[{"name":"4,8,12-trimethyl-1,3,7,11-tridecatetraene synthase activity","type":"exact"},{"name":"TMTT synthase activity","type":"exact"}],"termid":"GO:0097007"}


id: GO:0090297
data:
  {"annotated_genes":["SJAG_03957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94943],"is_not":false,"summary":null,"term":"GO:0090297"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA replication","termid":"GO:0090296"},{"relation_name":"is_a","term_name":"positive regulation of mitochondrial DNA metabolic process","termid":"GO:1901860"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication","termid":"GO:2000105"},{"relation_name":"positively_regulates","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007005","GO:0006259"],"is_obsolete":false,"name":"positive regulation of mitochondrial DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitochondrial DNA synthesis","type":"related"}],"termid":"GO:0090297","terms_by_termid":{"GO:0090297":null}}


id: GO:0043671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner part of the exine, which stains.","definition_xrefs":["PMID:28904424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endexine","termid":"GO:0043671"}


id: PBO:0038589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 8","termid":"PBO:0038589"}


id: PBO:0063293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 7","termid":"PBO:0063293"}


id: PBO:0047420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 10B","termid":"PBO:0047420"}


id: MONDO:0017444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both lower leg and foot","secondary_identifiers":["SCTID:278532000","icd11.foundation:835905199","MEDGEN:609276","Orphanet:294981","UMLS:C0431991","ICD10CM:Q72.2","GARD:21195"],"synonyms":[{"name":"tibiofibular terminal transverse meromelia","type":"exact"}],"termid":"MONDO:0017444","xrefs":{"Monarch":{"xref_id":"0017444"}}}


id: SO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base of the final codon of an incompletely annotated transcript is changed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminator_codon_variant","termid":"SO:0001590"},{"relation_name":"is_a","term_name":"inframe_variant","termid":"SO:0001650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_terminal_codon_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:incomplete_terminal_codon_variant","type":"exact"},{"name":"incomplete terminal codon variant","type":"exact"},{"name":"partial_codon","type":"exact"}],"termid":"SO:0001626"}


id: GO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NADP+ + H2O = 2-oxoglutarate + NADPH + H+.","definition_xrefs":["EC:1.2.1.26","MetaCyc:25-DIOXOVALERATE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11296"],"synonyms":[{"name":"2,5-dioxopentanoate:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047533"}


id: MONDO:0010070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive brachyolmia","termid":"MONDO:0018662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"brachyolmia type 1, Hobaek type","secondary_identifiers":["OMIM:271530","UMLS:C1849055","GARD:995","MEDGEN:338605","Orphanet:93301","MESH:C537099","icd11.foundation:1213374086"],"synonyms":[{"name":"BCYM1A","type":"exact"},{"name":"brachyolmia type 1, Hobaek type","type":"exact"},{"name":"brachyolmia, recessive type of Hobaek","type":"related"},{"name":"spondylodysplasia with Pure brachyolmia","type":"related"}],"termid":"MONDO:0010070","xrefs":{"Monarch":{"xref_id":"0010070"}}}


id: PBO:0052637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 5","termid":"PBO:0052637"}


id: PBO:0070836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 15","termid":"PBO:0070836"}


id: PBO:0065997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene B","termid":"PBO:0065997"}


id: PBO:0086313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with roles in exocytosis and cation homeostasis; functions in docking and fusion of post-Golgi vesicles with plasma membrane; regulates cell proliferation and colony development via the Rho1-Tor1 pathway; interacts with SNARE protein Sec9p; homolog of Drosophila lethal giant larvae tumor suppressor; SRO77 has a paralog, SRO7, that arose from the whole genome duplication","termid":"PBO:0086313"}


id: FYPO:0004067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["GO:0071619","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004067"}


id: GO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue, which typically differentiates from monocytes.","definition_xrefs":["GOC:hjd","CL:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast proliferation","termid":"GO:0002158"}


id: PBO:0055327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2755","termid":"PBO:0055327"}


id: PBO:0087276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-glutathionyl-(chloro)hydroquinone reductase (GS-HQR); glutathione transferase involved in cell-surface biosynthesis and architecture; catalyzes glutathione (GSH)-dependent reduction of GS-trichloro-p-hydroquinone to trichloro-p-hydroquinone; expression upregulated upon exposure to genotoxic agents, such as methyl methanesulfonate, cisplatin and bleomycin; not an essential gene; similar to YGR154C; green fluorescent protein (GFP)-fusion protein localizes to cytoplasm","termid":"PBO:0087276"}


id: GO:0055117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle contraction","termid":"GO:0006942"},{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"regulates","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction","termid":"GO:0055117"}


id: PBO:0084076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication","termid":"PBO:0084076"}


id: GO:1900478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sulfate assimilation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:7601277","GOC:dgf","PMID:7891681","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900478)","synonyms":[{"name":"activation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:1900478"}


id: GO:0044743
data:
  {"annotated_genes":["SJAG_01120","SJAG_05315","SJAG_01684","SJAG_03515","SJAG_02034","SJAG_00326","SJAG_03324","SJAG_04432","SJAG_01615","SJAG_01165","SJAG_01647","SJAG_00702","SJAG_04014","SJAG_05259","SJAG_04336","SJAG_04218","SJAG_02797","SJAG_02997","SJAG_02077","SJAG_03415","SJAG_00373","SJAG_02619","SJAG_03440","SJAG_03358","SJAG_00564","SJAG_04996","SJAG_04428","SJAG_01560","SJAG_03502","SJAG_02917","SJAG_01442","SJAG_02016","SJAG_01879","SJAG_04857","SJAG_00891","SJAG_01597","SJAG_02693","SJAG_05950","SJAG_03560","SJAG_00196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94247,97690,96331],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[87542,108916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[109030,106747,104349,106725,116377,101878,88746,90102,115914,93716,98437,105336,114363,99504,98734,96079,110941,98620,106668,87543,102458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[109196,110534,97430,101446,89432,89643,95666,104403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[102269,110993,96152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[100492,116437,97772,114435],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"}]},"cv_name":"biological_process","definition":"The directed movement of proteins into an intracellular organelle, across a membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00326":null,"SJAG_00373":null,"SJAG_00564":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01120":null,"SJAG_01165":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01879":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02917":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03440":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04014":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04428":null,"SJAG_04432":null,"SJAG_04857":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"protein transmembrane import into intracellular organelle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044743","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0030150":null,"GO:0045041":null,"GO:0160203":null}}


id: MONDO:0017761
data:
  {"annotated_genes":["SJAG_02399","SJAG_02117","SJAG_01007","SJAG_04260","SJAG_00379","SJAG_03371"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011417"},{"annotations":[84820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[84416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012251"},{"annotations":[84678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010651"},{"annotations":[84320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"},{"annotations":[86317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[84658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044726"},{"annotations":[86358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010200"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of metabolite absorption and transport","termid":"MONDO:0017757"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01007":null,"SJAG_02117":null,"SJAG_02399":null,"SJAG_03371":null,"SJAG_04260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of mineral absorption and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681035","GARD:21353","ICD10CM:E83.3","icd11.foundation:1833416892","ICD10CM:E83.1","MEDGEN:1842552","Orphanet:309836"],"termid":"MONDO:0017761","terms_by_termid":{"MONDO:0008787":null,"MONDO:0010200":null,"MONDO:0010572":null,"MONDO:0010651":null,"MONDO:0011417":null,"MONDO:0012251":null,"MONDO:0044726":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0017761"}}}


id: PBO:0088086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX (ubiquitin regulatory X) domain-containing protein; interacts with Cdc48p; UBX7 has a paralog, UBX6, that arose from the whole genome duplication","termid":"PBO:0088086"}


id: PATO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of being covered with stiff or rough hairs.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hispid","termid":"PATO:0002339"}


id: GO:0120190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","PMID:22767443","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of bile acid secretion","termid":"GO:0120188"},{"relation_name":"negatively_regulates","term_name":"bile acid secretion","termid":"GO:0032782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of bile acid secretion","termid":"GO:0120190"}


id: MONDO:1011672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, non-human animal","secondary_identifiers":["OMIA:002053"],"termid":"MONDO:1011672","xrefs":{"Monarch":{"xref_id":"1011672"}}}


id: GO:0030415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the enzyme carboxypeptidase A.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase A inhibitor activity (obsolete GO:0030415)","synonyms":[{"name":"carboxypeptidase A inhibitor activity","type":"exact"}],"termid":"GO:0030415"}


id: PBO:0082026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger ZZ-type containing 3","termid":"PBO:0082026"}


id: GO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3dg product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"complement component C3dg binding","termid":"GO:0001853"}


id: GO:0090415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-hydroxymethyl chlorophyll a + 2 reduced ferredoxin + 2 H+ chlorophyll a + 2 oxidized ferredoxin + H2O.","definition_xrefs":["RHEA:53544","GOC:kad","PMID:21934147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"7-hydroxymethyl chlorophyll a reductase activity","secondary_identifiers":["EC:1.17.7.2"],"termid":"GO:0090415"}


id: GO:0010738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein kinase A signaling. PKA signaling is the series of reactions, mediated by the intracellular serine/threonine kinase protein kinase A, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"protein kinase A signaling","termid":"GO:0010737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of protein kinase A signaling","synonyms":[{"name":"regulation of PKA signaling cascade","type":"related"},{"name":"regulation of protein kinase A signaling cascade","type":"related"},{"name":"regulation of protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010738"}


id: GO:0034021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silicon dioxide stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to silicon dioxide","synonyms":[{"name":"response to silica","type":"exact"},{"name":"response to silox","type":"exact"}],"termid":"GO:0034021"}


id: PBO:0048105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTX transcript, XIST regulator","termid":"PBO:0048105"}


id: PR:Q09837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.12c","secondary_identifiers":["UniProtKB:Q09837"],"synonyms":[{"name":"GPI mannosyltransferase IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGZ","type":"exact"}],"termid":"PR:Q09837"}


id: GO:0070585
data:
  {"annotated_genes":["SJAG_01917","SJAG_00569","SJAG_02797","SJAG_03358","SJAG_05300","SJAG_01879","SJAG_04432","SJAG_01405","SJAG_02397","SJAG_00404","SJAG_00196","SJAG_01684","SJAG_01951","SJAG_02355","SJAG_03648","SJAG_04533","SJAG_04072","SJAG_00564","SJAG_01615","SJAG_04996","SJAG_04336","SJAG_02524","SJAG_02917","SJAG_05259","SJAG_01442","SJAG_02361","SJAG_03633","SJAG_01004","SJAG_05302","SJAG_03415","SJAG_07010","SJAG_02398","SJAG_03560","SJAG_01780","SJAG_03416","SJAG_02034","SJAG_02077","SJAG_04641","SJAG_02809","SJAG_00687","SJAG_01640","SJAG_00373","SJAG_03502","SJAG_01560","SJAG_02016","SJAG_01647","SJAG_01120","SJAG_04014","SJAG_01597","SJAG_04218","SJAG_01949","SJAG_04208","SJAG_03515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97690,96331,94247],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[87542,108916],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[109030,106725,98734,105336,101878,114363,90102,106747,116377,98620,106668,88746,87543,99504,98437,93716,104349,102458,110941,96079,115914],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030150"},{"annotations":[87868,106748,91985,106669,102102,89599,115403,106453,112329,106726,98621],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[100101,88010,98204,113829,112480],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[113830],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0051204"},{"annotations":[89578,110935,109197,97782,109543,106727,109553,97431,90112],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[91510,104744,107230,108346,112322,101391],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[97595,101644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the mitochondrion.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04072":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in mitochondrion","type":"exact"},{"name":"protein localization in mitochondrion","type":"exact"}],"termid":"GO:0070585","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0051204":null,"GO:0160203":null}}


id: PBO:0042115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 187","termid":"PBO:0042115"}


id: PBO:0029609
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_tapered_vegetative_cell","termid":"PBO:0029609"}


id: PBO:0061673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 58 pseudogene 1","termid":"PBO:0061673"}


id: MONDO:0020666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoidosis characterized by the triad of erythema nodosum, bilateral hilar lymphadenopathy on chest radiograph, and joint pain.","definition_xrefs":["Wikipedia:Löfgren_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Löfgren syndrome","secondary_identifiers":["MEDGEN:573580","SCTID:238676008","UMLS:C0340164"],"synonyms":[{"name":"Loefgrens syndrome","type":"exact"},{"name":"Löfgrens syndrome","type":"exact"}],"termid":"MONDO:0020666","xrefs":{"Monarch":{"xref_id":"0020666"}}}


id: GO:0070347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of brown fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"regulates","term_name":"brown fat cell proliferation","termid":"GO:0070342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of brown fat cell proliferation","synonyms":[{"name":"regulation of brown adipocyte proliferation","type":"exact"},{"name":"regulation of brown adipose cell proliferation","type":"exact"}],"termid":"GO:0070347"}


id: PBO:0071282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 5","termid":"PBO:0071282"}


id: MONDO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation with episodic fever and lymphadenopathy","secondary_identifiers":["UMLS:C5394286","OMIM:618852","MEDGEN:1719052"],"synonyms":[{"name":"AIEFL","type":"exact"},{"name":"AUTOINFLAMMATION WITH EPISODIC FEVER AND LYMPHADENOPATHY","type":"exact"},{"name":"Cleavage-Resistant Ripk1-Induced Autoinflammatory Syndrome","type":"exact"},{"name":"Cria Syndrome","type":"exact"},{"name":"autoinflammation with episodic fever and lymphadenopathy","type":"exact"}],"termid":"MONDO:0030018","xrefs":{"Monarch":{"xref_id":"0030018"}}}


id: GO:1901965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endoplasmic reticulum to chloroplast.","definition_xrefs":["GOC:TermGenie","PMID:18689504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endoplasmic reticulum to chloroplast transport","synonyms":[{"name":"ER to chloroplast transport","type":"exact"}],"termid":"GO:1901965"}


id: PBO:0074318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 7","termid":"PBO:0074318"}


id: PBO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.99.-","termid":"PBO:0005767"}


id: PBO:0049823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain containing 2","termid":"PBO:0049823"}


id: PBO:0079147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 9","termid":"PBO:0079147"}


id: MONDO:0010255
data:
  {"annotated_genes":["SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010863"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03843":null},"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300136","UMLS:C1848042","MEDGEN:338376"],"synonyms":[{"name":"Iddmx","type":"related"},{"name":"diabetes mellitus, insulin-dependent, X-linked","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","type":"exact"},{"name":"insulin-dependent diabetes mellitus, X-linked, susceptibility to","type":"related"}],"termid":"MONDO:0010255","terms_by_termid":{"MONDO:0010863":null},"xrefs":{"Monarch":{"xref_id":"0010255"}}}


id: _global:seeAlso
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seeAlso","secondary_identifiers":["http://www.w3.org/2000/01/rdf-schema#seeAlso"],"termid":"_global:seeAlso","xrefs":{"Monarch":{"xref_id":"seeAlso"}}}


id: GO:0051777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:ent-kaur-16-en-19-oate + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = gibberellin A12 + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase]. Catalyzes three successive oxidations of ent-kaurenoic acid.","definition_xrefs":["RHEA:33219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ent-kaurenoic acid monooxygenase activity","secondary_identifiers":["EC:1.14.14.107"],"synonyms":[{"name":"ent-kaurenoate oxidase activity","type":"related"},{"name":"ent-kaurenoic acid oxidase activity","type":"related"}],"termid":"GO:0051777"}


id: PBO:0041047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRD3 opposite strand","termid":"PBO:0041047"}


id: GO:0000731
data:
  {"annotated_genes":["SJAG_05197","SJAG_02818","SJAG_04089","SJAG_02199","SJAG_04190","SJAG_00573","SJAG_03906","SJAG_00611","SJAG_00814","SJAG_04877","SJAG_00406","SJAG_04791","SJAG_00153","SJAG_16460","SJAG_02667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94252],"is_not":false,"summary":null,"term":"GO:0000731"},{"annotations":[104094,102007,94430,108260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904161"},{"annotations":[103162,103400,98500,116450,102057,102077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070987"},{"annotations":[102078,103401,116451,95073,102058,112699,98501,103163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042276"},{"annotations":[110902],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"},{"annotations":[116452,103167,97511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019985"}]},"cv_name":"biological_process","definition":"Synthesis of DNA that proceeds from the broken 3' single-strand DNA end and uses the homologous intact duplex as the template.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"},{"relation_name":"part_of","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00406":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA synthesis involved in DNA repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA repair synthesis","type":"broad"},{"name":"DNA synthesis during DNA repair","type":"related"},{"name":"mitotic DNA repair synthesis","type":"narrow"}],"termid":"GO:0000731","terms_by_termid":{"GO:0000731":null,"GO:0019985":null,"GO:0042276":null,"GO:0070987":null,"GO:1904161":null,"GO:1904332":null}}


id: MONDO:0054837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 57","secondary_identifiers":["MEDGEN:1648280","OMIM:618050","UMLS:C4748003"],"synonyms":[{"name":"MRD57","type":"related"},{"name":"TLK2-related neurodevelopmental disorder","type":"exact"},{"name":"TLK2-related syndrome","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 57","type":"exact"},{"name":"intellectual disability, autosomal dominant 57","type":"exact"},{"name":"mental retardation, autosomal dominant 57","type":"related"}],"termid":"MONDO:0054837","xrefs":{"Monarch":{"xref_id":"0054837"}}}


id: PBO:0055418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2848","termid":"PBO:0055418"}


id: PBO:0077462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C divergent transcript","termid":"PBO:0077462"}


id: GO:1902207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:11909529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-2-mediated signaling pathway","termid":"GO:1902205"},{"relation_name":"positively_regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"activation of IL-2-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-2-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-2-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902207"}


id: GO:1900489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of [2Fe-2S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:pr","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [2Fe-2S] cluster assembly","termid":"GO:1900487"},{"relation_name":"is_a","term_name":"positive regulation of iron-sulfur cluster assembly","termid":"GO:1903331"},{"relation_name":"positively_regulates","term_name":"[2Fe-2S] cluster assembly","termid":"GO:0044571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of [2Fe-2S] cluster assembly","synonyms":[{"name":"activation of 2Fe-2S cluster assembly","type":"narrow"},{"name":"activation of [2Fe-2S] cluster assembly","type":"narrow"},{"name":"activation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"positive regulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"positive regulation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"up regulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"up regulation of [2Fe-2S] cluster assembly","type":"exact"},{"name":"up regulation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"up-regulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"up-regulation of [2Fe-2S] cluster assembly","type":"exact"},{"name":"up-regulation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"upregulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"upregulation of [2Fe-2S] cluster assembly","type":"exact"},{"name":"upregulation of [2Fe-2S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900489"}


id: GO:0004250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, preferably a neutral or hydrophobic one, from a polypeptide. Aminoacyl-arylamides are poor substrates.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aminopeptidase I activity (obsolete GO:0004250)","synonyms":[{"name":"aminopeptidase I activity","type":"exact"}],"termid":"GO:0004250"}


id: FYPO:0007623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial respiratory chain complex III assembly is decreased.","definition_xrefs":["PomBase:mah","GO:0034551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitochondrial respiratory chain complex assembly","termid":"FYPO:0007122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex III assembly","synonyms":[{"name":"decreased mitochondrial respiratory chain complex III assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex III assembly during vegetative growth","type":"exact"},{"name":"decreased respiratory chain complex III assembly","type":"exact"}],"termid":"FYPO:0007623"}


id: MONDO:0018675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A IgG4-related disease that involves the eye.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"IgG4-related ophthalmic disorder","secondary_identifiers":["GARD:21885","Orphanet:449563","UMLS:C5569009","MEDGEN:1800432"],"synonyms":[{"name":"IgG4-related disease of eye","type":"exact"},{"name":"eye IgG4-related disease","type":"exact"}],"termid":"MONDO:0018675","xrefs":{"Monarch":{"xref_id":"0018675"}}}


id: _global:helper_property_(not_for_use_in_curation)
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper_property_(not_for_use_in_curation)","secondary_identifiers":["RO:0002464"],"termid":"_global:helper_property_(not_for_use_in_curation)"}


id: PR:O74479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit O, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11910:SF0","OMA:SCHPO05006","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.06","secondary_identifiers":["UniProtKB:O74479"],"synonyms":[{"name":"ATP synthase chain 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OSCP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5O","type":"exact"},{"name":"oligomycin sensitivity conferral protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74479"}


id: PBO:0045628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 40 (pseudogene)","termid":"PBO:0045628"}


id: PBO:0034082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_serial_homology_relationship_with","termid":"PBO:0034082"}


id: PBO:0067449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 571, pseudogene","termid":"PBO:0067449"}


id: PBO:0082963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; non-essential gene that is induced in a GDH1 deleted strain with altered redox metabolism; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0082963"}


id: SO:0000762
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000762 PAC_clone (obsolete SO:0000762)","synonyms":[{"name":"P1_clone","type":"related"}],"termid":"SO:0000762"}


id: PBO:0066798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 97","termid":"PBO:0066798"}


id: PBO:0072811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 7","termid":"PBO:0072811"}


id: PBO:0029724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_cells_with_1C_DNA_content","termid":"PBO:0029724"}


id: GO:0030668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a dense granule of the type found in apicomplexan parasites.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"merozoite dense granule","termid":"GO:0020026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"merozoite dense granule membrane","termid":"GO:0030668"}


id: GO:0021674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 8 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:curators","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 8 development","termid":"GO:0021574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 8 morphogenesis","termid":"GO:0021674"}


id: PBO:0027665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_telomere","termid":"PBO:0027665"}


id: GO:0003428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a chondrocyte from one site to another that contributes to the shaping of growth plate cartilage in an endochondral bone.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"},{"relation_name":"part_of","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte intercalation involved in growth plate cartilage morphogenesis","termid":"GO:0003428"}


id: MONDO:0018684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic neonatal atrial flutter (AFL) is a rare rhythm disorder, characterized by sustained tachycardia in newborns and infants with an atrial rate often at around 440 beats/minute (range 340-580). AFL may manifest as asymptomatic tachycardia, congestive heart failure or hydrops.","definition_xrefs":["Orphanet:45452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial flutter","termid":"MONDO:0005310"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"idiopathic neonatal atrial flutter","secondary_identifiers":["icd11.foundation:208964573","GARD:18831","ICD10CM:P29.1","MEDGEN:904097","SCTID:715560009","UMLS:C4275090"],"synonyms":[{"name":"neonatal cardiac dysrhythmia","type":"exact"}],"termid":"MONDO:0018684","xrefs":{"Monarch":{"xref_id":"0018684"}}}


id: PBO:0112645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAse P component","termid":"PBO:0112645"}


id: PBO:0069175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 429, pseudogene","termid":"PBO:0069175"}


id: PBO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies4","termid":"PBO:0000634"}


id: GO:0140533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the host's RNAi-mediated antiviral immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17693253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host RNAi-mediated antiviral immune response","synonyms":[{"name":"suppression of host RNAi-mediated antiviral immune response","type":"exact"},{"name":"suppression of host RNAi-mediated antiviral immunity","type":"exact"},{"name":"suppression of host RNAi-mediated gene silencing","type":"exact"}],"termid":"GO:0140533"}


id: GO:0006577
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102803,110680,110679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[110681,102804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any betaine, the N-trimethyl derivative of an amino acid.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino-acid betaine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"betaine metabolic process","type":"exact"},{"name":"betaine metabolism","type":"exact"}],"termid":"GO:0006577","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: PBO:0053128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte cytosolic protein 2","termid":"PBO:0053128"}


id: GO:0160164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chromatin looping.","definition_xrefs":["PMID:34856126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chromatin organization","termid":"GO:1905268"},{"relation_name":"negatively_regulates","term_name":"chromatin looping","termid":"GO:0140588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromatin looping","termid":"GO:0160164"}


id: PBO:0030708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_replication_origin_binding","termid":"PBO:0030708"}


id: MONDO:0016037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly circumscribed, intermediate fibrocytic neoplasm arising from the superficial soft tissues. It is characterized by the presence of spindle-shaped fibroblasts, and an infiltrative growth pattern.","definition_xrefs":["NCIT:C6814"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"fibromatosis","termid":"MONDO:0005031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superficial Fibromatosis","secondary_identifiers":["MEDGEN:140804","EFO:1000556","UMLS:C0406571","ICD9:729.99","Orphanet:199257","SCTID:238853007"],"synonyms":[{"name":"superficial Fibromatosis","type":"exact"}],"termid":"MONDO:0016037","xrefs":{"Monarch":{"xref_id":"0016037"}}}


id: GO:2000419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil extravasation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"regulates","term_name":"eosinophil extravasation","termid":"GO:0072682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil extravasation","termid":"GO:2000419"}


id: MONDO:0009430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive hypophosphatemic rickets in which the cause of the disease is a mutation in the DMP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive hypophosphatemic rickets","termid":"MONDO:0017324"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hypophosphatemic rickets, autosomal recessive, 1","secondary_identifiers":["OMIM:241520","MEDGEN:1632314","MESH:C562792","UMLS:C4551495","GARD:18416"],"synonyms":[{"name":"ARHR1","type":"related"},{"name":"Arhr","type":"related"},{"name":"DMP1 autosomal recessive hypophosphatemic rickets","type":"exact"},{"name":"autosomal recessive hypophosphatemic rickets caused by mutation in DMP1","type":"exact"},{"name":"hypophosphatemia, autosomal recessive","type":"related"},{"name":"hypophosphatemic rickets, AR","type":"exact"},{"name":"hypophosphatemic rickets, autosomal recessive, 1","type":"exact"},{"name":"hypophosphatemic rickets, autosomal recessive, type 1","type":"exact"}],"termid":"MONDO:0009430","xrefs":{"Monarch":{"xref_id":"0009430"}}}


id: FYPO:0000046
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118691,118679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004481"},{"annotations":[118399,118555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000082"},{"annotations":[118318,118304,118303,118302,118642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000080"},{"annotations":[118602,118518,118514,118522,118230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001355"},{"annotations":[118631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001408"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cell population growth is decreased relative to normal. Decreased growth may reflect a reduced growth rate (i.e. slower growth), growth that occurs to a lesser extent than normal, or both. 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sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32243490":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"secondary_identifiers":["FYPO:0000222"],"single_locus_annotated_genes":["SJAG_02592","SJAG_04464","SJAG_00266","SJAG_01946","SJAG_00514","SJAG_01794","SJAG_00409","SJAG_02527","SJAG_05207","SJAG_04703","SJAG_03198","SJAG_04697","SJAG_03453"],"single_locus_genotype_uniquenames":["sty1delta","scd1delta","cmp7delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cem1delta","oar2delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","for3delta","scd2delta","gpd1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","ras1delta","atf1delta","gms1delta"],"synonyms":[{"name":"aerobic growth defects","type":"related"},{"name":"decreased aerobic cell population growth","type":"narrow"},{"name":"decreased growth","type":"broad"},{"name":"reduced aerobic cell population growth","type":"narrow"},{"name":"reduced cell population growth","type":"exact"},{"name":"slow aerobic cell population growth","type":"narrow"}],"termid":"FYPO:0000046","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000117":null,"FYECO:0000137":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0001355":null,"FYPO:0001408":null,"FYPO:0004481":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0061585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 5","termid":"PBO:0061585"}


id: PBO:0060046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 34","termid":"PBO:0060046"}


id: PBO:0068001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 303","termid":"PBO:0068001"}


id: MONDO:0004182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stage IV includes T4b, NO,MO/any T NI, MO/ any T N2 MO,/ any T N3 MO/ any T any N M1 : T4b: Tumor invades the pelvic wall, abdominal wall. N1: Metastasis in a single lymph node, 2 cm or less in greatest dimension. N2: Metastasis in a single lymph node, more than 2 cm but not more than 5 cm in greatest dimension; or multiple lymph nodes, none more than 5 cm in greatest dimension. N3: Metastasis in a lymph node more than 5 cm in greatest dimension. M1: Distant metastasis.","definition_xrefs":["NCIT:C9368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder carcinoma","termid":"MONDO:0004986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"stage IVb bladder cancer","secondary_identifiers":["UMLS:C1336362","DOID:7315","MEDGEN:277737"],"synonyms":[{"name":"Jewett-Marshall bladder cancer","type":"related"},{"name":"Jewett-Marshall stage D1 bladder cancer","type":"related"},{"name":"Jewett-Marshall stage D2 bladder cancer","type":"exact"},{"name":"Jewett-Marshall stage D2 urinary bladder cancer","type":"exact"},{"name":"Jewett-Marshall stage D2 urinary bladder carcinoma","type":"exact"},{"name":"stage IVB bladder cancer","type":"exact"},{"name":"stage IVB urinary bladder cancer","type":"exact"},{"name":"stage IVB urinary bladder carcinoma","type":"exact"}],"termid":"MONDO:0004182","xrefs":{"Monarch":{"xref_id":"0004182"}}}


id: FYPO:0004536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle spindle assembly checkpoint signaling is abnormal (does not occur, or occurs abnormally). Abnormal arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal response to mitotic cell cycle spindle assembly checkpoint signaling","synonyms":[{"name":"abnormal mitotic cell cycle spindle assembly checkpoint arrest","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from spindle assembly checkpoint activation","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from spindle assembly defective checkpoint activation","type":"related"},{"name":"abnormal response to mitotic spindle assembly checkpoint signaling","type":"exact"}],"termid":"FYPO:0004536"}


id: PBO:0029517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_with_abnormal_cell_shape","termid":"PBO:0029517"}


id: GO:2000087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesonephric glomerulus development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"regulation of glomerulus development","termid":"GO:0090192"},{"relation_name":"regulates","term_name":"mesonephric glomerulus development","termid":"GO:0061224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesonephric glomerulus development","termid":"GO:2000087"}


id: GO:0009172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate catabolic process","termid":"GO:0009128"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009159"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate catabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate breakdown","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate catabolism","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009172"}


id: MONDO:0030707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"balanoposthitis","termid":"MONDO:0001618"},{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas balanoposthitis","secondary_identifiers":["MEDGEN:83327","NCIT:C35406","UMLS:C0341769"],"synonyms":[{"name":"Trichomonas balanoposthitis","type":"exact"}],"termid":"MONDO:0030707","xrefs":{"Monarch":{"xref_id":"0030707"}}}


id: MONDO:0971000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 93","secondary_identifiers":["DOID:0070592","OMIM:620849"],"termid":"MONDO:0971000","xrefs":{"Monarch":{"xref_id":"0971000"}}}


id: GO:0071778
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A SWI/SNF-type complex that directly interacts with the vitamin D receptor (VDR) through the Williams syndrome transcription factor (WSTF), and mediates the recruitment of unliganded VDR to VDR target sites in promoters. The WINAC complex contains at least 13 subunits, including WSTF, several SWI/SNF components, and DNA replication-related factors.","definition_xrefs":["GOC:BHF","PMID:12837248"],"gene_count":0,"genotype_count":0,"name":"obsolete WINAC complex (obsolete GO:0071778)","synonyms":[{"name":"WINAC complex","type":"exact"}],"termid":"GO:0071778"}


id: GO:0048814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendrite morphogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"regulates","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendrite morphogenesis","termid":"GO:0048814"}


id: PR:000027571
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3 that is a translation product of the Schizosaccharomyces pombe 972h- hht2 gene or a 1:1 ortholog thereof in fungi.","definition_xrefs":["PMID:11242054","PRO:CNA","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.2","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"hht2","type":"exact"}],"termid":"PR:000027571"}


id: GO:1901257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage colony-stimulating factor production.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor production","termid":"GO:1901256"},{"relation_name":"negatively_regulates","term_name":"macrophage colony-stimulating factor production","termid":"GO:0036301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of macrophage colony-stimulating factor production","synonyms":[{"name":"down regulation of M-CSF production","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"down-regulation of M-CSF production","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"downregulation of M-CSF production","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"inhibition of M-CSF production","type":"exact"},{"name":"inhibition of macrophage colony-stimulating factor production","type":"narrow"},{"name":"negative regulation of M-CSF production","type":"exact"}],"termid":"GO:1901257"}


id: PBO:0039435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and armadillo repeat containing","termid":"PBO:0039435"}


id: PBO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit 1","termid":"PBO:0044218"}


id: PBO:0069626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 903, pseudogene","termid":"PBO:0069626"}


id: PBO:0026848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_snoRNA_gene","termid":"PBO:0026848"}


id: MONDO:1010713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyruvate dehydrogenase deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency, non-human animal","termid":"MONDO:1010105"},{"relation_name":"is_a","term_name":"peripheral neuropathy, dog","termid":"MONDO:1011007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase deficiency, dog","secondary_identifiers":["OMIA:001406-9615"],"termid":"MONDO:1010713","xrefs":{"Monarch":{"xref_id":"1010713"}}}


id: GO:0051209
data:
  {"annotated_genes":["SJAG_00321","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71967],"is_not":false,"summary":null,"term":"GO:0051209"},{"annotations":[107819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the cytosolic compartment.","definition_xrefs":["GOC:mtg_lung","GOC:dph","GOC:hjd","PMID:1814929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sequestering of calcium ion","termid":"GO:0051283"},{"relation_name":"is_a","term_name":"calcium ion transmembrane import into cytosol","termid":"GO:0097553"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion (Ca2+) mobilization","type":"broad"},{"name":"calcium mobilization","type":"broad"},{"name":"cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"release of stored calcium ion (Ca2+)","type":"broad"},{"name":"release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051209","terms_by_termid":{"GO:0051209":null,"GO:0061454":null}}


id: MOD:00368
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-carboxy-L-methionine.","definition_xrefs":["Unimod:299#M","PubMed:11120890","RESID:AA0363","PubMed:8312270","PubMed:12595263","PubMed:10368287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carboxy-L-methionine","synonyms":[{"name":"(S)-2-carboxyamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-carbamic-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-carbamic-4-(methylthio)butanoic acid","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"},{"name":"N-carboxy-L-methionine","type":"exact"},{"name":"N-carboxymethionine","type":"exact"}],"termid":"MOD:00368"}


id: PBO:0003314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase","termid":"PBO:0003314"}


id: PR:Q9P546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps002 gene.","definition_xrefs":["UniProtKB:Q9P546","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ698.02c","synonyms":[{"name":"Spom972h-rps002","type":"exact"}],"termid":"PR:Q9P546"}


id: GO:0005832
data:
  {"annotated_genes":["SJAG_03320","SJAG_02378","SJAG_02926","SJAG_01002","SJAG_00609","SJAG_03570","SJAG_04121","SJAG_00447"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88055,91320,101006,102011,105380,106491,108369,110492],"is_not":false,"summary":null,"term":"GO:0005832"}]},"cv_name":"cellular_component","definition":"A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor.","definition_xrefs":["GOC:sgd_curators","PMID:11580267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00609":null,"SJAG_01002":null,"SJAG_02378":null,"SJAG_02926":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04121":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"chaperonin-containing T-complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CCT particle","type":"exact"},{"name":"TriC","type":"exact"}],"termid":"GO:0005832","terms_by_termid":{"GO:0005832":null}}


id: PATO:0001533
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's having two or more hues or degrees of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-colored","synonyms":[{"name":"variegated","type":"exact"}],"termid":"PATO:0001533"}


id: PBO:0109598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transvar_coordinates","termid":"PBO:0109598"}


id: PomGeneEx:0000001
data:
  {"annotated_genes":["SJAG_00118","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"qualitative_gene_expression":[{"annotations":[118457,118438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"PomGeneEx:0000011"}]},"cv_name":"PomGeneEx","definition":"A qualifier that describes a level of gene expression, i.e. amount or rate of production of RNA or protein, observed under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null},"genotype_count":0,"is_obsolete":false,"name":"gene expression qualifier","references_by_uniquename":{"PMID:25866389":null},"termid":"PomGeneEx:0000001","terms_by_termid":{"GO:0000087":null,"PomGeneEx:0000011":null}}


id: PBO:0072944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 23","termid":"PBO:0072944"}


id: PBO:0081808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 1, Y-linked","termid":"PBO:0081808"}


id: PBO:0034404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_development_of","termid":"PBO:0034404"}


id: MONDO:0043923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, autoimmune inflammatory condition of the mucous membranes in the oral cavity that affects approximately two percent of the population and is most often seen in middle aged women. It is characterized by white, lacy patches; red, swollen tissue; papules and plaques; or open sores. The lesions are typically bilateral.","definition_xrefs":["NCIT:C7406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen planus, oral","secondary_identifiers":["MEDGEN:60084","UMLS:C0206139","MESH:D017676","SCTID:235049008"],"synonyms":[{"name":"olp - oral lichen planus","type":"related"},{"name":"oral lichen planus","type":"exact"}],"termid":"MONDO:0043923","xrefs":{"Monarch":{"xref_id":"0043923"}}}


id: GO:0016587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains an Isw1 subunit from the ISWI-family of ATPases and acts to modify chromatin structure.","definition_xrefs":["GOC:krc","GOC:mah","PMID:15284901","PMID:15020051","PMID:16568949","PMID:21810179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Isw1 complex","termid":"GO:0016587"}


id: MONDO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gonorrhea that involves the seminal vesicle.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"vesiculitis","termid":"MONDO:0004767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal seminal vesiculitis","secondary_identifiers":["UMLS:C0578661","icd11.foundation:1226540022","DOID:10400","MEDGEN:662073","SCTID:301990003"],"synonyms":[{"name":"gonococcal seminal vesiculitis (acute)","type":"exact"},{"name":"gonorrhea of seminal vesicle","type":"exact"},{"name":"gonorrhoea of seminal vesicle","type":"exact"},{"name":"seminal vesicle gonorrhea","type":"exact"},{"name":"seminal vesicle gonorrhoea","type":"exact"}],"termid":"MONDO:0001027","xrefs":{"Monarch":{"xref_id":"0001027"}}}


id: PBO:0063222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 2","termid":"PBO:0063222"}


id: MONDO:0013906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the ODAPH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A4","secondary_identifiers":["UMLS:C3553830","DOID:0110062","OMIM:614832","GARD:15847","MEDGEN:766744"],"synonyms":[{"name":"AI2A4","type":"exact"},{"name":"ODAPH amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in ODAPH","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA4","type":"exact"},{"name":"amelogenesis imperfecta type IIA4","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA4","type":"related"},{"name":"amelogenesis imperfecta, type IIA4","type":"exact"}],"termid":"MONDO:0013906","xrefs":{"Monarch":{"xref_id":"0013906"}}}


id: GO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase II, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["PMID:15020047","PMID:22982364","GOC:txnOH","PMID:31628251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"RNA polymerase II promoter clearance","synonyms":[{"name":"promoter clearance from RNA polymerase II promoter","type":"exact"},{"name":"promoter escape from RNA polymerase II promoter","type":"exact"},{"name":"promoter-paused RNA polymerase II release","type":"exact"}],"termid":"GO:0001111"}


id: GO:0046864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of isoprenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Isoprenoids comprise a group of compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"isoprenoid transport","termid":"GO:0046864"}


id: PBO:0004775
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBP Cleavage activating Protein","termid":"PBO:0004775"}


id: PBO:0069141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 392, pseudogene","termid":"PBO:0069141"}


id: PBO:0109080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3104","termid":"PBO:0109080"}


id: SO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_artifact","synonyms":[{"name":"insertion artifact","type":"exact"}],"termid":"SO:0002175"}


id: PBO:0068520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 115, pseudogene","termid":"PBO:0068520"}


id: FYPO:0000885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000885"}


id: GO:0006970
data:
  {"annotated_genes":["SJAG_04567","SJAG_00409","SJAG_04726","SJAG_02342","SJAG_03185","SJAG_02592","SJAG_01084","SJAG_03815","SJAG_04205","SJAG_03893","SJAG_02883","SJAG_04668","SJAG_00596","SJAG_00661","SJAG_02091"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[88718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[113600,91088,93564,95167,105659,101973,116209,115419,103704,109488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[99357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[109162,109163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009651"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_01084":null,"SJAG_02091":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03815":null,"SJAG_03893":null,"SJAG_04205":null,"SJAG_04567":null,"SJAG_04668":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to osmotic stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"osmotic response","type":"exact"},{"name":"osmotic stress response","type":"exact"}],"termid":"GO:0006970","terms_by_termid":{"GO:0009651":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null}}


id: PBO:0073179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 1","termid":"PBO:0073179"}


id: MONDO:0018811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital portosystemic shunt is a rare, congenital anomaly of the great veins characterized by an abnormal communication between one or more veins of the portal and the caval systems, resulting in complete or partial diversion of the portal blood away from the liver to the systemic circulation. Clinical manifestations include liver atrophy, hypergalactosemia without uridine diphosphate enzyme deficiency, hyperammonemia, encephalopathy (resulting in learning disabilities, extreme fatigability and seizures), pulmonary hypertension, hypoxemia from hepatopulmonary syndrome and benign or malignant tumors.","definition_xrefs":["Orphanet:480531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital portosystemic shunt","secondary_identifiers":["icd11.foundation:682625970","GARD:21979","MEDGEN:712860","UMLS:C1290495"],"synonyms":[{"name":"congenital portosystemic venous fistula","type":"exact"}],"termid":"MONDO:0018811","xrefs":{"Monarch":{"xref_id":"0018811"}}}


id: PBO:0028341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0028341"}


id: GO:0032715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-6 production","termid":"GO:0032675"},{"relation_name":"negatively_regulates","term_name":"interleukin-6 production","termid":"GO:0032635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-6 production","secondary_identifiers":["GO:1900165","GO:0045409"],"synonyms":[{"name":"down regulation of interleukin-6 production","type":"exact"},{"name":"down-regulation of interleukin-6 production","type":"exact"},{"name":"downregulation of interleukin-6 production","type":"exact"},{"name":"inhibition of interleukin-6 production","type":"narrow"},{"name":"negative regulation of IL-6 production","type":"exact"},{"name":"negative regulation of interleukin-6 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-6 secretion","type":"narrow"}],"termid":"GO:0032715"}


id: RO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is the ribosomal translation of y if and only if a ribosome reads x through a series of triplet codon-amino acid adaptor activities (GO:0030533) and produces y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal_translation_of","termid":"RO:0002512"}


id: GO:0015970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"guanosine tetraphosphate metabolic process","termid":"GO:0015969"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"guanosine tetraphosphate biosynthetic process","synonyms":[{"name":"guanosine tetraphosphate (5'-ppGpp-3') biosynthesis","type":"exact"},{"name":"guanosine tetraphosphate (5'-ppGpp-3') biosynthetic process","type":"exact"},{"name":"guanosine tetraphosphate anabolism","type":"exact"},{"name":"guanosine tetraphosphate biosynthesis","type":"exact"},{"name":"guanosine tetraphosphate formation","type":"exact"},{"name":"guanosine tetraphosphate synthesis","type":"exact"}],"termid":"GO:0015970"}


id: MONDO:0012201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tibia, bowing of, with pseudarthrosis and pectus excavatum (obsolete MONDO:0012201)","termid":"MONDO:0012201","xrefs":{"Monarch":{"xref_id":"0012201"}}}


id: PBO:0087946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4A; DEAD-box RNA helicase that couples ATPase activity to mRNA binding and unwinding; ATP hydrolysis accelerates the recruitment of mRNA during 48S preinitiation complex (PIC) assembly; ATPase activity stimulated by either eIF4G1 or by the PIC in an eIF3g and eIFGi subunit-dependent manner, independent of eIF4E and eIF4G; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E and eIF4G; protein abundance increases in response to DNA replication stress","termid":"PBO:0087946"}


id: MONDO:1011827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mast cell tumor, non-human animal","secondary_identifiers":["OMIA:002578"],"termid":"MONDO:1011827","xrefs":{"Monarch":{"xref_id":"1011827"}}}


id: PR:P24488
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- php2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P24488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator hap2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.11c","synonyms":[{"name":"Spom972h-php2","type":"exact"}],"termid":"PR:P24488"}


id: GO:0031537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemical reactions and pathways involving anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anthocyanin metabolic process","synonyms":[{"name":"regulation of anthocyanin metabolism","type":"exact"}],"termid":"GO:0031537"}


id: PBO:0080374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog A","termid":"PBO:0080374"}


id: GO:0102995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: columbianetin + NADPH + O2 + H+ = angelicin + acetone + NADP + 2 H2O.","definition_xrefs":["EC:1.14.14.148","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"angelicin synthase activity","secondary_identifiers":["MetaCyc:RXN-9689","RHEA:27481"],"termid":"GO:0102995"}


id: MONDO:0035236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of pyoderma gangrenosum characterized by multiple painful, sterile pustules with a surrounding erythematous halo, predominantly occurring on the trunk and extensor surfaces of the limbs, and potentially persisting for months. Histopathology shows a dermal neutrophilic infiltrate and subcorneal neutrophilic micropustules. The condition is commonly associated with inflammatory bowel disease.","definition_xrefs":["Orphanet:538866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma gangrenosum","termid":"MONDO:0018824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pustular pyoderma gangrenosum","secondary_identifiers":["ICD10CM:L88","GARD:22221","UMLS:C5681317","MEDGEN:1814476"],"termid":"MONDO:0035236","xrefs":{"Monarch":{"xref_id":"0035236"}}}


id: GO:0090312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["PMID:20027304","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein deacetylation","termid":"GO:0090311"},{"relation_name":"positively_regulates","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein deacetylation","synonyms":[{"name":"positive regulation of protein amino acid deacetylation","type":"exact"}],"termid":"GO:0090312"}


id: MONDO:0010477
data:
  {"annotated_genes":["SJAG_00156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86148],"is_not":false,"summary":null,"term":"MONDO:0010477"}]},"cv_name":"mondo","definition":"The Maat-Kievit-Brunner type of Ohdo syndrome is a rare condition characterized by intellectual disability and distinctive facial features. It has only been reported in males.","direct_ancestors":[{"relation_name":"is_a","term_name":"Ohdo syndrome and variants","termid":"MONDO:0000734"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"MED12-related intellectual disability syndrome","termid":"MONDO:0100000"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"blepharophimosis - intellectual disability syndrome, MKB type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:293707","MEDGEN:785805","GARD:17341","ICD9:759.89","OMIM:300895","SCTID:699297004","UMLS:C3698541"],"synonyms":[{"name":"BMRS, MKB type","type":"exact"},{"name":"BMRS, Maat-Kievit-Brunner type","type":"exact"},{"name":"OHDOX","type":"related"},{"name":"Ohdo syndrome, X-linked","type":"related"},{"name":"Ohdo syndrome, X-linked, X-linked recessive","type":"exact"},{"name":"X-linked Ohdo syndrome","type":"exact"},{"name":"blepharophimosis-intellectual disability syndrome, Maat-Kievit-Brunner type","type":"exact"},{"name":"blepharophimosis-mental retardation syndrome, Maat-Kievit-Brunner type","type":"related"}],"termid":"MONDO:0010477","terms_by_termid":{"MONDO:0010477":null},"xrefs":{"Monarch":{"xref_id":"0010477"}}}


id: MOD:00964
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine epsilon amino to imine + 12 amu","synonyms":[{"name":"N6-(methylidene)-lysine","type":"exact"}],"termid":"MOD:00964"}


id: PR:Q9UTL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol-glycan biosynthesis class W protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20661:SF0","OMA:SCHPO01933","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored wall transfer protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.10c","secondary_identifiers":["UniProtKB:Q9UTL4"],"synonyms":[{"name":"Spom972h-PIGW","type":"exact"},{"name":"meiotically up-regulated gene 59 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTL4"}


id: FYPO:0006706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a calcium-transporting ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0000652","FYPO:0000707","FYPO:0002114"],"is_obsolete":false,"name":"abolished calcium-transporting ATPase activity","synonyms":[{"name":"calcium-transporting ATPase activity abolished","type":"exact"}],"termid":"FYPO:0006706"}


id: FYPO:0006804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a 5'-deoxyribose-5-phosphate lyase activity are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal 5'-deoxyribose-5-phosphate lyase activity","synonyms":[{"name":"normal dRP lyase activity","type":"broad"},{"name":"normal dRPase activity","type":"broad"}],"termid":"FYPO:0006804"}


id: GO:0035207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of hemocyte proliferation. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of hemocyte proliferation","termid":"GO:0035206"},{"relation_name":"negatively_regulates","term_name":"hemocyte proliferation","termid":"GO:0035172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemocyte proliferation","synonyms":[{"name":"down regulation of hemocyte proliferation","type":"exact"},{"name":"down-regulation of hemocyte proliferation","type":"exact"},{"name":"downregulation of hemocyte proliferation","type":"exact"},{"name":"inhibition of hemocyte proliferation","type":"narrow"},{"name":"negative regulation of arthropod blood cell proliferation","type":"exact"}],"termid":"GO:0035207"}


id: PR:O94433
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC660.17c gene.","definition_xrefs":["UniProtKB:O94433","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C660.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.17c","synonyms":[{"name":"Spom972h-SPBC660.17c","type":"exact"}],"termid":"PR:O94433"}


id: PBO:0044816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108E (pseudogene)","termid":"PBO:0044816"}


id: MONDO:0002951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of basal cell carcinoma morphologically characterized by the presence of thin strands of basaloid cells forming a reticulate pattern.","definition_xrefs":["NCIT:C27535"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tonsil cancer","termid":"MONDO:0006998"},{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin adenoid basal cell carcinoma","secondary_identifiers":["UMLS:C1304296","ICDO:8098/3","DOID:4294","MEDGEN:266272","SCTID:402525008"],"synonyms":[{"name":"adenoid basal cell carcinoma","type":"exact"},{"name":"skin adenoid basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002951","xrefs":{"Monarch":{"xref_id":"0002951"}}}


id: PR:O13942
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.12c","synonyms":[{"name":"Spom972h-SPAC23H3.12c","type":"exact"}],"termid":"PR:O13942"}


id: PBO:0084856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; overproduction suppresses mutations in the COX2 leader peptide-encoding region","termid":"PBO:0084856"}


id: GO:0048618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the foregut are generated and organized, during the post-embryonic phase.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"foregut morphogenesis","termid":"GO:0007440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic foregut morphogenesis","termid":"GO:0048618"}


id: MONDO:0859338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 78","secondary_identifiers":["UMLS:C5774276","OMIM:620170","DOID:0070577","MEDGEN:1824049"],"termid":"MONDO:0859338","xrefs":{"Monarch":{"xref_id":"0859338"}}}


id: MONDO:0013137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any central areolar choroidal dystrophy in which the cause of the disease is a mutation in the PRPH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central areolar choroidal dystrophy","termid":"MONDO:0008982"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"},{"relation_name":"is_a","term_name":"PRPH2-related retinopathy","termid":"MONDO:1040055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"choroidal dystrophy, central areolar 2","secondary_identifiers":["OMIM:613105","MEDGEN:442696","GARD:15615","MESH:C567750","UMLS:C2751290"],"synonyms":[{"name":"CACD2","type":"related"},{"name":"PRPH2 central areolar choroidal dystrophy","type":"exact"},{"name":"central areolar choroidal dystrophy caused by mutation in PRPH2","type":"exact"},{"name":"choroidal dystrophy, central areolar 2","type":"exact"},{"name":"choroidal dystrophy, central areolar type 2","type":"exact"},{"name":"macular dystrophy, progressive","type":"related"}],"termid":"MONDO:0013137","xrefs":{"Monarch":{"xref_id":"0013137"}}}


id: PBO:0089225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L38","termid":"PBO:0089225"}


id: GO:0009893
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id: GO:0016864
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id: MONDO:0005349
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id: PBO:0029620
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id: PBO:0013125
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id: GO:0048248
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id: MONDO:0015175
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id: PBO:0061653
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id: PBO:0050529
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id: GO:0034026
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id: PATO:0001137
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id: PBO:0091209
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id: PBO:0044086
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A6","termid":"PBO:0044086"}


id: GO:0140449
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90553],"is_not":false,"summary":null,"term":"GO:0140449"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together the centromeric region of a chromosome and the inner nuclear membrane by interacting with both the centromere/kinetochore complex and the nuclear membrane, in order to establish and maintain the centromere/kinetochore location.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"centromere-nuclear envelope anchor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere nuclear envelope anchor activity","type":"exact"},{"name":"centromere nuclear envelope tether activity","type":"exact"},{"name":"centromere-inner nuclear envelope anchor activity","type":"exact"},{"name":"centromere-inner nuclear envelope tether activity","type":"exact"},{"name":"chromosome, centromeric region-nuclear envelope anchor activity","type":"exact"},{"name":"nuclear envelope-centromere anchor activity","type":"exact"},{"name":"nuclear envelope-centromere tether activity","type":"exact"}],"termid":"GO:0140449","terms_by_termid":{"GO:0140449":null}}


id: FYPO:0003067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which stalled replication forks are unwound four-stranded structures resembling Holliday junctions, but are not subsequently resolved correctly.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"abnormal replication fork reversal","synonyms":[{"name":"abnormal replication fork reversal during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork reversal during vegetative growth","type":"exact"}],"termid":"FYPO:0003067"}


