# terms

id: MONDO:0100347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"excluded_subClassOf","term_name":"obsolete gastroenteropancreatic neuroendocrine neoplasm (obsolete MONDO:0015078)","termid":"MONDO:0015078"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carcinoid syndrome","secondary_identifiers":["MedDRA:10007270","MEDGEN:6191","NCIT:C3215","UMLS:C0024586","EFO:1000852","ICD9:259.2","ICD10CM:E34.0","Orphanet:100093","NORD:890","icd11.foundation:111763187","SCTID:35868009","GARD:5994"],"synonyms":[{"name":"carcinoid syndrome","type":"exact"},{"name":"carcinoid tumor syndrome","type":"related"},{"name":"carcinoid tumors, intestinal","type":"related"},{"name":"carcinoid tumour syndrome","type":"related"},{"name":"malignant carcinoid syndrome","type":"exact"}],"termid":"MONDO:0100347","xrefs":{"Monarch":{"xref_id":"0100347"}}}


id: PBO:0043374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 4","termid":"PBO:0043374"}


id: PBO:0088774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Kri1","termid":"PBO:0088774"}


id: MONDO:0020950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections of the eye caused by minute intracellular agents. These infections may lead to severe inflammation in various parts of the eye - conjunctiva, iris, eyelids, etc. Several viruses have been identified as the causative agents. Among these are Herpesvirus, Adenovirus, Poxvirus, and Myxovirus.","definition_xrefs":["MESH:D015828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"viral eye infection","secondary_identifiers":["MEDGEN:8753","UMLS:C0015407","SCTID:312132001"],"synonyms":[{"name":"EYE INFECT VIRAL","type":"related"},{"name":"Eye Infection, Viral","type":"related"},{"name":"Eye Infections, Viral","type":"related"},{"name":"Infection, Viral Eye","type":"related"},{"name":"Infection, Viral Ocular","type":"related"},{"name":"Infections, Viral Eye","type":"related"},{"name":"Infections, Viral Ocular","type":"related"},{"name":"OCULAR INFECT VIRAL","type":"related"},{"name":"Ocular Infection, Viral","type":"related"},{"name":"Ocular Infections, Viral","type":"related"},{"name":"VIRAL EYE INFECT","type":"related"},{"name":"Viral Eye Infection","type":"related"},{"name":"Viral Eye Infections","type":"related"},{"name":"Viral Ocular Infection","type":"related"},{"name":"Viral Ocular Infections","type":"related"},{"name":"Viral eye infection","type":"related"},{"name":"viral eye infection","type":"exact"}],"termid":"MONDO:0020950","xrefs":{"Monarch":{"xref_id":"0020950"}}}


id: PBO:0053364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 273","termid":"PBO:0053364"}


id: MONDO:0002664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the extrahepatic bile ducts. It is characterized by the presence of signet ring malignant epithelial cells.","definition_xrefs":["NCIT:C5776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct adenocarcinoma","termid":"MONDO:0002665"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"extrahepatic bile duct signet ring cell carcinoma","secondary_identifiers":["MEDGEN:163667","DOID:3494","UMLS:C0861859"],"synonyms":[{"name":"bile duct signet Ring cell carcinoma","type":"exact"},{"name":"bile duct signet ring cell carcinoma","type":"exact"},{"name":"extrahepatic bile duct signet Ring cell carcinoma","type":"exact"},{"name":"signet Ring cell bile duct carcinoma","type":"exact"},{"name":"signet Ring cell carcinoma of bile duct","type":"exact"},{"name":"signet Ring cell carcinoma of the bile duct","type":"exact"}],"termid":"MONDO:0002664","xrefs":{"Monarch":{"xref_id":"0002664"}}}


id: PBO:0053998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1322","termid":"PBO:0053998"}


id: PBO:0072655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8B","termid":"PBO:0072655"}


id: MONDO:0007044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant skeletal dysplasia caused by mutation(s) in the PRKAR1A gene, encoding cAMP-dependent protein kinase type I-alpha regulatory subunit. It is characterized by short stature, brachydactyly, and characteristic facial features. Resistance to multiple hormones is a common finding.","definition_xrefs":["NCIT:C136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrodysostosis","termid":"MONDO:0019797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Acrodysostosis 1 with or without hormone resistance","secondary_identifiers":["UMLS:C3276228","MEDGEN:477858","OMIM:101800","GARD:15030"],"synonyms":[{"name":"ACRDYS1","type":"related"},{"name":"ADOHR","type":"exact"},{"name":"Acrodysostosis 1","type":"exact"},{"name":"Acrodysostosis 1 with or without hormone resistance","type":"exact"},{"name":"Acrodysostosis 1, with or without hormone resistance","type":"exact"}],"termid":"MONDO:0007044","xrefs":{"Monarch":{"xref_id":"0007044"}}}


id: GO:0005982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving starch, the most important reserve polysaccharide in plants. It is a glucan consisting of two components, amylose and amylopectin, which are both glucose homopolymers. Starch is synthesized as a temporary storage form of carbon and can be catabolized to produce sucrose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"starch metabolic process","synonyms":[{"name":"starch metabolism","type":"exact"}],"termid":"GO:0005982"}


id: MONDO:0009561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis is an inherited lysosomal storage disorder characterized by immune deficiency, facial and skeletal abnormalities, hearing impairment, and intellectual deficit.","definition_xrefs":["Orphanet:61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0005328","MONDO:0037792"],"is_obsolete":false,"name":"alpha-mannosidosis","secondary_identifiers":["NORD:755","OMIM:248500","SCTID:65524005","icd11.foundation:1944256516","DOID:3413","MESH:D008363","UMLS:C0024748","NANDO:1200126","GARD:6968","NCIT:C84548","ICD9:271.8","MEDGEN:7467"],"synonyms":[{"name":"Alpha mannosidase B deficiency","type":"related"},{"name":"Alpha-D-mannosidosis","type":"exact"},{"name":"Alpha-mannosidase B deficiency","type":"related"},{"name":"MANSA","type":"related"},{"name":"alpha-mannosidase deficiency","type":"exact"},{"name":"alpha-mannosidosis","type":"exact"},{"name":"deficiency of alpha-mannosidase","type":"exact"},{"name":"lysosomal Alpha-D-mannosidase deficiency","type":"related"},{"name":"lysosomal alpha-D-mannosidase deficiency","type":"exact"},{"name":"mannosidosis, ALPHA B, lysosomal","type":"related"},{"name":"mannosidosis, alpha B lysosomal","type":"related"},{"name":"mannosidosis, alpha-, types I and II","type":"exact"}],"termid":"MONDO:0009561","xrefs":{"Monarch":{"xref_id":"0009561"}}}


id: PBO:0062370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 8 pseudogene","termid":"PBO:0062370"}


id: PBO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease II Exo2","termid":"PBO:0001175"}


id: FYPO:0003822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a ribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased ribonuclease activity","synonyms":[{"name":"reduced ribonuclease activity","type":"exact"}],"termid":"FYPO:0003822"}


id: PBO:0088797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphospho-oligosaccharide-protein glycosyltransferase Ost1","termid":"PBO:0088797"}


id: GO:0061293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contribute to the progression of the mesonephric nephron over time. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in mesonephric nephron development (obsolete GO:0061293)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in mesonephric nephron development","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in mesonephric nephron development","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in mesonephric nephron development","type":"exact"}],"termid":"GO:0061293"}


id: PBO:0035954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_negative_regulation_of_protein_kinase_activity_during_mitosis","termid":"PBO:0035954"}


id: PBO:0081187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc fingers and homeoboxes 3","termid":"PBO:0081187"}


id: PBO:0052286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDSR divergent transcript","termid":"PBO:0052286"}


id: GO:0035069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage-specific break down of the larval midgut during Drosophila metamorphosis, to allow replacement of larval structures by tissues and structures that form the adult fly.","definition_xrefs":["GOC:mtg_apoptosis","GOC:bf","GOC:dph","PMID:9409683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure regression","termid":"GO:0060033"},{"relation_name":"part_of","term_name":"metamorphosis","termid":"GO:0007552"},{"relation_name":"part_of","term_name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval midgut histolysis","synonyms":[{"name":"larval midgut regression","type":"exact"}],"termid":"GO:0035069"}


id: MONDO:0100430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liver disease characterized by the presence of excessive fibrous connective tissue in the liver.","definition_xrefs":["PMID:31722201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"fibrotic liver disease","synonyms":[{"name":"hepatic fibrosis (disease)","type":"exact"},{"name":"liver fibrosis (disease)","type":"exact"}],"termid":"MONDO:0100430","xrefs":{"Monarch":{"xref_id":"0100430"}}}


id: PBO:0060005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 25","termid":"PBO:0060005"}


id: MONDO:0021067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises from the mediastinum. Representative examples include seminoma, embryonal carcinoma, yolk sac tumor, teratoma, and mixed germ cell tumor.","definition_xrefs":["NCIT:C6437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"},{"relation_name":"is_a","term_name":"neoplasm of mediastinum","termid":"MONDO:0021386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinal germ cell tumor","secondary_identifiers":["UMLS:C1334655","MEDGEN:233678"],"synonyms":[{"name":"germ cell neoplasm of mediastinum","type":"exact"},{"name":"germ cell neoplasm of the mediastinum","type":"exact"},{"name":"germ cell tumor of mediastinum","type":"exact"},{"name":"germ cell tumor of the mediastinum","type":"exact"},{"name":"germ cell tumour of mediastinum","type":"exact"},{"name":"germ cell tumour of the mediastinum","type":"exact"},{"name":"mediastinal germ cell neoplasm","type":"exact"},{"name":"mediastinal germ cell tumor","type":"exact"},{"name":"mediastinum germ cell tumor","type":"exact"},{"name":"mediastinum germ cell tumour","type":"exact"},{"name":"thymic germ cell tumor","type":"exact"},{"name":"thymic germ cell tumour","type":"exact"}],"termid":"MONDO:0021067","xrefs":{"Monarch":{"xref_id":"0021067"}}}


id: PBO:0072217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 binding protein 1","termid":"PBO:0072217"}


id: MONDO:0006824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma having known association to krebs2 gene mutation","definition_xrefs":["EFO:1001007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Krebs 2 carcinoma","secondary_identifiers":["UMLS:C0007128","MEDGEN:2842","MESH:D002287"],"termid":"MONDO:0006824","xrefs":{"Monarch":{"xref_id":"0006824"}}}


id: FYPO:0000187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which assembly of heterochromatin mediated by small RNA is abnormal. Small RNA-mediated heterochromatin assembly results in transcriptional silencing.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"},{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly","termid":"FYPO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal heterochromatin assembly by small RNA","synonyms":[{"name":"abnormal RNAi-mediated chromatin silencing","type":"exact"},{"name":"abnormal chromatin silencing by small RNA","type":"exact"},{"name":"abnormal heterochromatin assembly by small RNA during mitotic cell cycle","type":"related"},{"name":"abnormal heterochromatin assembly by small RNA during vegetative growth","type":"exact"}],"termid":"FYPO:0000187"}


id: FYECO:0000435
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed carbonyl cyanide m-chlorophenyl hydrazone","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CCCP","secondary_identifiers":["PMID:37540145"],"synonyms":[{"name":"An experimental condition in which carbonyl cyanide m-chlorophenyl hydrazone was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","type":"exact"}],"termid":"FYECO:0000435"}


id: PBO:0045914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 10","termid":"PBO:0045914"}


id: MONDO:0016325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease with hypertrophic cardiomyopathy (obsolete MONDO:0016325)","secondary_identifiers":["ICD10CM:E74.0","Orphanet:217572"],"synonyms":[{"name":"GSD with hypertrophic cardiomyopathy","type":"exact"},{"name":"glycogenosis with hypertrophic cardiomyopathy","type":"exact"}],"termid":"MONDO:0016325","xrefs":{"Monarch":{"xref_id":"0016325"}}}


id: PBO:0051379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 6-21 (non-functional)","termid":"PBO:0051379"}


id: PBO:0031659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pseudohyphal_growth","termid":"PBO:0031659"}


id: PBO:0086666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR","termid":"PBO:0086666"}


id: MONDO:0011013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant hypocalcemia in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypocalcemia","termid":"MONDO:0018543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant hypocalcemia 1","secondary_identifiers":["MEDGEN:87438","OMIM:601198","DOID:0090107","UMLS:C0342345"],"synonyms":[{"name":"CASR autosomal dominant hypocalcemia","type":"exact"},{"name":"HYPOC1","type":"exact"},{"name":"autosomal dominant hypocalcemia caused by mutation in CASR","type":"exact"},{"name":"autosomal dominant hypocalcemia type 1","type":"exact"},{"name":"hypercalciuric hypocalcemia","type":"related"},{"name":"hypocalcemia, autosomal dominant","type":"broad"},{"name":"hypocalcemia, autosomal dominant 1","type":"related"},{"name":"hypocalcemia, autosomal dominant 1, with Bartter syndrome","type":"related"},{"name":"hypocalcemia, autosomal dominant type 1","type":"exact"},{"name":"hypocalcemia, autosomal dominant, with Bartter syndrome","type":"exact"},{"name":"hypocalcemia, familial","type":"related"}],"termid":"MONDO:0011013","xrefs":{"Monarch":{"xref_id":"0011013"}}}


id: PBO:0068374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 167","termid":"PBO:0068374"}


id: GO:1903097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of the formation of nucleosomes containing the histone H3 variant CENP-A to form centromeric chromatin. This specialised chromatin occurs at centromeric region in point centromeres, and the central core in modular centromeres.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24710126"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of CENP-A containing nucleosome assembly (obsolete GO:1903097)","synonyms":[{"name":"regulation of CENP-A deposition","type":"related"},{"name":"regulation of CENP-A loading","type":"related"},{"name":"regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"regulation of centromere specific nucleosome exchange","type":"related"},{"name":"regulation of centromere-specific histone exchange","type":"exact"},{"name":"regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"GO:1903097"}


id: FYPO:0002767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of terbinafine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to terbinafine","synonyms":[{"name":"resistance to terbinafine during mitotic cell cycle","type":"related"},{"name":"resistance to terbinafine during vegetative growth","type":"exact"},{"name":"resistant to terbinafine","type":"exact"}],"termid":"FYPO:0002767"}


id: PBO:0051362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-15","termid":"PBO:0051362"}


id: PBO:0061235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP14 antisense RNA 1","termid":"PBO:0061235"}


id: MONDO:0018196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete germ cell tumor of testis (obsolete MONDO:0018196)","termid":"MONDO:0018196","xrefs":{"Monarch":{"xref_id":"0018196"}}}


id: MONDO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Neorickettsia sennetsu.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ehrlichiosis","termid":"MONDO:0016003"},{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Neorickettsia infectious disease","termid":"MONDO:0024416"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sennetsu fever","secondary_identifiers":["MEDGEN:105459","UMLS:C0520779","NORD:1703","SCTID:21013006","ICD9:088.89","MESH:C537582","DOID:0050485","GARD:120"],"synonyms":[{"name":"Human Ehrlichial infection, sennetsu type","type":"related"},{"name":"Neorickettsia sennetsu caused disease or disorder","type":"exact"},{"name":"Neorickettsia sennetsu disease or disorder","type":"exact"},{"name":"Neorickettsia sennetsu infectious disease","type":"exact"},{"name":"sennetsu ehrlichiosis","type":"related"},{"name":"sennetsu fever","type":"exact"}],"termid":"MONDO:0000332","xrefs":{"Monarch":{"xref_id":"0000332"}}}


id: PATO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's being composed of more than one identifiable entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed","termid":"PATO:0002122"}


id: PBO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin transmembrane transporter Pmd1","termid":"PBO:0018184"}


id: MONDO:0020091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to obstructive azoospermia (obsolete MONDO:0020091)","secondary_identifiers":["Orphanet:98343"],"synonyms":[{"name":"Male infertility due to impaired sperm transport","type":"exact"}],"termid":"MONDO:0020091","xrefs":{"Monarch":{"xref_id":"0020091"}}}


id: GO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl aldehyde + H2O + NAD(P)+ = ferulate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coniferyl-aldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-1241"],"synonyms":[{"name":"coniferyl aldehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050269"}


id: GO:0034241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage fusion","termid":"GO:0034239"},{"relation_name":"is_a","term_name":"positive regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060143"},{"relation_name":"positively_regulates","term_name":"macrophage fusion","termid":"GO:0034238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage fusion","termid":"GO:0034241"}


id: PBO:0086290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in DNA repair; mutants show reduced efficiency of non-homologous end-joining repair","termid":"PBO:0086290"}


id: PBO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn3","termid":"PBO:0003302"}


id: PBO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR46","termid":"PBO:0017088"}


id: MONDO:0009796
data:
  {"annotated_genes":["SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86286],"is_not":false,"summary":null,"term":"MONDO:0009796"}]},"cv_name":"mondo","definition":"A very rare inherited retinal dystrophy characterized by progressive chorioretinal atrophy, myopia and early cataract.","definition_xrefs":["Orphanet:414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic choroid disorder","termid":"MONDO:0001898"},{"relation_name":"is_a","term_name":"inborn disorder of ornithine metabolism","termid":"MONDO:0017356"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"ornithine aminotransferase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200484","NANDO:2200486","MESH:C538071","MESH:D015799","NCIT:C84744","UMLS:C0018425","OMIM:258870","DOID:1415","MEDGEN:6695","GARD:6556"],"synonyms":[{"name":"Fuchs atrophia gyrata chorioideae et retinae","type":"related"},{"name":"Fuchs gyrate atrophy","type":"related"},{"name":"Fuchs gyrate atrophy of the choroid and retina","type":"related"},{"name":"GACR","type":"exact"},{"name":"Girate atrophy of the retina","type":"related"},{"name":"HOGA","type":"exact"},{"name":"OAT deficiency","type":"related"},{"name":"OKT deficiency","type":"related"},{"name":"Oat deficiency","type":"related"},{"name":"Okt deficiency","type":"related"},{"name":"Ornithinemia","type":"related"},{"name":"Ornithinemia with gyrate atrophy","type":"exact"},{"name":"gyrate atrophy","type":"exact"},{"name":"gyrate atrophy of choroid and retina","type":"related"},{"name":"gyrate atrophy of choroid and retina with or without ornithinemia","type":"exact"},{"name":"gyrate atrophy of the choroid and/or retina","type":"exact"},{"name":"gyrate atrophy of the retina","type":"exact"},{"name":"hoga","type":"exact"},{"name":"hyperornithinemia","type":"exact"},{"name":"hyperornithinemia with gyrate atrophy of choroid and retina","type":"related"},{"name":"hyperornithinemia-gyrate atrophy of choroid and retina syndrome","type":"exact"},{"name":"ornithine Keto acid aminotransferase deficiency","type":"related"},{"name":"ornithine aminotransferase deficiency","type":"exact"},{"name":"ornithine ketoacid aminotransferase deficiency","type":"related"},{"name":"ornithine-Delta-aminotransferase deficiency","type":"related"}],"termid":"MONDO:0009796","terms_by_termid":{"MONDO:0009796":null},"xrefs":{"Monarch":{"xref_id":"0009796"}}}


id: GO:0045142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA triple helix. The formation of triple helical DNA has been evoked in several cellular processes including transcription, replication, and recombination.","definition_xrefs":["PMID:10681538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"triplex DNA binding","termid":"GO:0045142"}


id: PBO:0017963
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nim1 Interacting Factor","termid":"PBO:0017963"}


id: PBO:0055500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2934","termid":"PBO:0055500"}


id: MONDO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myopathy, myofibrillar (obsolete MONDO:0000071)","termid":"MONDO:0000071","xrefs":{"Monarch":{"xref_id":"0000071"}}}


id: MONDO:0003024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the breast.","definition_xrefs":["NCIT:C5184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast angiosarcoma","secondary_identifiers":["GARD:9974","MESH:C536368","MEDGEN:272382","ONCOTREE:BA","UMLS:C1332614","DOID:4511"],"synonyms":[{"name":"BA","type":"related"},{"name":"angiosarcoma (disease) of breast","type":"exact"},{"name":"angiosarcoma of breast","type":"exact"},{"name":"angiosarcoma of the breast","type":"exact"},{"name":"breast angiosarcoma","type":"exact"},{"name":"breast angiosarcoma (disease)","type":"exact"},{"name":"breast hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma of breast","type":"exact"},{"name":"hemangiosarcoma of the breast","type":"exact"}],"termid":"MONDO:0003024","xrefs":{"Monarch":{"xref_id":"0003024"}}}


id: GO:0045260
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A proton-transporting ATP synthase complex found in the plasma membrane. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase complex (obsolete GO:0045260)","synonyms":[{"name":"hydrogen-translocating F-type ATPase complex","type":"broad"},{"name":"hydrogen-transporting ATP synthase","type":"exact"},{"name":"plasma membrane hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"proton-transporting ATP synthase complex","type":"broad"}],"termid":"GO:0045260"}


id: MOD:00826
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and an L-cysteine residue by a thioester bond to form S-(L-threonyl)-L-cysteine.","definition_xrefs":["RESID:AA0415","PubMed:15268951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-threonyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S,3R)-2-amino-3-hydroxybutanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Threonyl cysteine thioester (Cys-Thr)","type":"exact"},{"name":"S-(2-amino-3-hydroxybutanoyl)cysteine","type":"exact"},{"name":"S-(L-threonyl)-L-cysteine","type":"exact"},{"name":"XLNK1ThrSCys","type":"exact"},{"name":"threonine cysteine thioester","type":"exact"}],"termid":"MOD:00826"}


id: GO:0018091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-asparagine.","definition_xrefs":["RESID:AA0196"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine racemization (obsolete GO:0018091)","termid":"GO:0018091"}


id: GO:0042646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a plastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid stroma","termid":"GO:0009532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid nucleoid","termid":"GO:0042646"}


id: MONDO:0017825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-functioning pituitary adenoma","termid":"MONDO:0019613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silent pituitary adenoma","secondary_identifiers":["ICD10CM:D35.2","Orphanet:314786","UMLS:C0338078","GARD:21392","MEDGEN:90850"],"termid":"MONDO:0017825","xrefs":{"Monarch":{"xref_id":"0017825"}}}


id: PBO:0081825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF747 divergent transcript","termid":"PBO:0081825"}


id: PBO:0038537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 12B","termid":"PBO:0038537"}


id: MONDO:0008324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoarthrogryposis","secondary_identifiers":["MEDGEN:356790","OMIM:177300","UMLS:C1867485","MESH:C566753"],"synonyms":[{"name":"ankylosis at elbow and knee","type":"related"},{"name":"hereditary congenital rigidity of elbows and knees","type":"related"},{"name":"pseudoarthrogryposis","type":"exact"}],"termid":"MONDO:0008324","xrefs":{"Monarch":{"xref_id":"0008324"}}}


id: PBO:0027918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myriocin_during_mating","termid":"PBO:0027918"}


id: MONDO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign lesion composed of dilated lymphatic channels. Painless swelling is the usual clinical manifestation.","definition_xrefs":["NCIT:C8965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"lymphatic vessel neoplasm","termid":"MONDO:0036870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphangioma","secondary_identifiers":["SCTID:400178008","ICD9:228.1","ICDO:9170/0","SCTID:254836000","Orphanet:2415","UMLS:C0024221","MEDGEN:6153","MESH:D008202","GARD:9789","DOID:1475","NANDO:2201032"],"synonyms":[{"name":"LM","type":"related"},{"name":"benign lymphangioma","type":"exact"},{"name":"benign lymphangioma (morphologic abnormality)","type":"exact"},{"name":"congenital lymphangioma","type":"narrow"},{"name":"lymphangioma","type":"exact"},{"name":"lymphangioma, benign","type":"exact"}],"termid":"MONDO:0002013","xrefs":{"Monarch":{"xref_id":"0002013"}}}


id: MONDO:0011142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome, musculocontractural type is a congenital form of Ehlers-Danlos syndrome characterized by distinct craniofacial features, multiple contractures, progressive joint and skin laxity, adduction-flexion contractures of the thumbs, talipes equinovarus, bruisability and multisystem fragility-related manifestations.","definition_xrefs":["Orphanet:2953"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005267","MONDO:0005066"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, musculocontractural type","secondary_identifiers":["MESH:C000600608","NANDO:1200652","SCTID:720860004","GARD:8486","MEDGEN:356497","UMLS:C1866294","NANDO:2201262"],"synonyms":[{"name":"ATCS","type":"exact"},{"name":"CHST14-related EDS","type":"exact"},{"name":"CHST14-related Ehlers-Danlos syndrome","type":"exact"},{"name":"D4ST1-deficient EDS","type":"exact"},{"name":"D4ST1-deficient Ehlers-Danlos syndrome","type":"exact"},{"name":"Dundar syndrome","type":"related"},{"name":"EDS, Kosho type","type":"exact"},{"name":"EDS, arthrogryposic type","type":"exact"},{"name":"EDS, musculocontractural type","type":"exact"},{"name":"EDS6B, formerly","type":"related"},{"name":"EDSMC","type":"related"},{"name":"EDSMC1","type":"related"},{"name":"EDSmc","type":"related"},{"name":"Ehlers-Danlos syndrome, Kosho type","type":"exact"},{"name":"Ehlers-Danlos syndrome, arthrogryposic type","type":"exact"},{"name":"Ehlers-Danlos syndrome, musculocontractural type 1","type":"related"},{"name":"Ehlers-Danlos syndrome, musculocontractural type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIB, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome, type Vib","type":"related"},{"name":"Ehlers-Danlos syndrome, type Vib, formerly","type":"related"},{"name":"MCEDS","type":"exact"},{"name":"adducted thumb clubfoot syndrome","type":"related"},{"name":"adducted thumb, clubfoot, and progressive joint and skin laxity syndrome","type":"related"},{"name":"adducted thumb-club foot syndrome","type":"related"},{"name":"adducted thumb-clubfoot syndrome","type":"exact"},{"name":"adducted thumbs Dundar type","type":"related"},{"name":"adducted thumbs-arthrogryposis syndrome, Dundar type","type":"exact"},{"name":"arthrogryposis, distal, with peculiar facies and hydronephrosis","type":"related"},{"name":"autosomal recessive adducted thumb-club foot syndrome","type":"related"},{"name":"musculocontractural EDS","type":"related"},{"name":"musculocontractural Ehlers-Danlos syndrome","type":"exact"}],"termid":"MONDO:0011142","xrefs":{"Monarch":{"xref_id":"0011142"}}}


id: PBO:0082314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for the F0 sector of mitochondrial F1F0 ATP synthase; mitochondrial inner membrane protein; interacts genetically with ATP6","termid":"PBO:0082314"}


id: PBO:0041875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic arginine sensor for mTORC1 subunit 2","termid":"PBO:0041875"}


id: SO:0001064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Active peptides are proteins which are biologically active, released from a precursor molecule.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_protein_region","termid":"SO:0000419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"active_peptide","secondary_identifiers":["http://en.wikipedia.org/wiki/Peptide","BS:00076"],"synonyms":[{"name":"active peptide","type":"exact"},{"name":"peptide","type":"broad"}],"termid":"SO:0001064"}


id: FYPO:0001875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","termid":"FYPO:0001874"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","synonyms":[{"name":"decreased asymmetric protein localisation to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic SPB","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"decreased occurrence of normally asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"reduced asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001875"}


id: PBO:0078277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 10-1","termid":"PBO:0078277"}


id: PATO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conical quality inhering in a bearer by virtue of the bearer's resembling a cone, with the pointed end attached to an organism.","definition_xrefs":["wiktionary:http://en.wiktionary.org/wiki/obconical"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conical","termid":"PATO:0002021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obconical","termid":"PATO:0002347"}


id: GO:0044774
data:
  {"annotated_genes":["SJAG_03695","SJAG_02771","SJAG_01855","SJAG_00364","SJAG_02266","SJAG_04671","SJAG_01680","SJAG_03942","SJAG_01677","SJAG_02026","SJAG_01146","SJAG_00640","SJAG_03160","SJAG_05373","SJAG_01044","SJAG_03898","SJAG_00623","SJAG_03720","SJAG_01605","SJAG_00169","SJAG_03026","SJAG_01429","SJAG_02563","SJAG_00429","SJAG_01084","SJAG_04280","SJAG_00486","SJAG_04140","SJAG_00327","SJAG_03048","SJAG_01708","SJAG_01205","SJAG_02098","SJAG_01873","SJAG_04287","SJAG_01010","SJAG_03927","SJAG_02576","SJAG_01076","SJAG_02074","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92760,93137,108465,113392,98384,113602,115139,79493,115368,116839,110341,101541,105775,90992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[116404,115195,102497,108466,115936,105776,106993,99722,88327,111175,93138,90636,98385,91728,93159,98551,116235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[90512,108824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[90993,90637,108467,116840,98553,89419,110872,99723,87757,105777,93139,88328,116149,100237,113393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[89654,88329,106824,116236,88374,111176,115196,98386,101543,90638,93739,95208,100707,87758,110873,115197,100042,91729,105778,98554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA during mitosis. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and ends with signal transduction.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitotic DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902403","GO:0070683"],"synonyms":[{"name":"intracellular signal transduction involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signal transduction involved in topo II checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"narrow"},{"name":"intracellular signal transduction pathway involved in topo II checkpoint","type":"narrow"},{"name":"intracellular signal transduction pathway involved in topoisomerase II checkpoint","type":"narrow"},{"name":"intracellular signaling cascade involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in topo II checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"related"},{"name":"intracellular signaling pathway involved in topo II checkpoint","type":"narrow"},{"name":"intracellular signaling pathway involved in topoisomerase II checkpoint","type":"related"},{"name":"mitotic DNA integrity checkpoint","type":"exact"},{"name":"mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"signal transduction via intracellular signaling cascade involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in topo II checkpoint","type":"related"}],"termid":"GO:0044774","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0044773":null}}


id: GO:0060594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the mammary line is specified. The mammary line is a ridge of epidermal cells that will form the mammary placodes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"mammary gland formation","termid":"GO:0060592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland specification","synonyms":[{"name":"mammary line specification","type":"related"}],"termid":"GO:0060594"}


id: PBO:0074412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 14","termid":"PBO:0074412"}


id: GO:0070083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-sculpted monoamine transport vesicle.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"clathrin-sculpted monoamine transport vesicle","termid":"GO:0070081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle membrane","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle membrane","type":"exact"}],"termid":"GO:0070083"}


id: PBO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 20","termid":"PBO:0050164"}


id: GO:0016676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor (obsolete GO:0016676)","synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, oxygen as acceptor","type":"exact"}],"termid":"GO:0016676"}


id: PBO:0028716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_bipolar_index","termid":"PBO:0028716"}


id: GO:0043846
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heptamer that includes the tau and gamma products of the dnaX gene and the chi/psi subcomplex. Confers structural asymmetry that allows the polymerase to replicate both leading and lagging strands.","definition_xrefs":["PMID:12940977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"DNA polymerase III complex","termid":"GO:0009360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"DNA polymerase III, clamp loader complex","synonyms":[{"name":"DNA polymerase III, DnaX complex","type":"exact"},{"name":"DNA polymerase III, DnaX subcomplex","type":"exact"},{"name":"clamp loader complex","type":"broad"}],"termid":"GO:0043846"}


id: PBO:0062735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 2","termid":"PBO:0062735"}


id: PBO:0029757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_5'-adenosine_monophosphate_hydrolase_activity","termid":"PBO:0029757"}


id: MONDO:0003616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of nodules in the isthmus of the fallopian tube due to fallopian tube diverticulosis. It may cause infertility or ectopic pregnancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic salpingitis","termid":"MONDO:0003617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salpingitis isthmica nodosa","secondary_identifiers":["MEDGEN:82840","SCTID:36742000","UMLS:C0269043","NCIT:C40119","DOID:5730","icd11.foundation:1586025352"],"termid":"MONDO:0003616","xrefs":{"Monarch":{"xref_id":"0003616"}}}


id: PBO:0027781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_dephosphorylation","termid":"PBO:0027781"}


id: PBO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.2","termid":"PBO:0000530"}


id: PBO:0027019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nalidixic_acid","termid":"PBO:0027019"}


id: GO:0032436
data:
  {"annotated_genes":["SJAG_03048","SJAG_03699","SJAG_02723","SJAG_01210","SJAG_00642","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101566,105816,108043,110856,116204],"is_not":false,"summary":null,"term":"GO:0032436"},{"annotations":[88155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"is_a","term_name":"positive regulation of proteasomal protein catabolic process","termid":"GO:1901800"},{"relation_name":"is_a","term_name":"positive regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000060"},{"relation_name":"positively_regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"stimulation of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"up regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"up-regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"upregulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"}],"termid":"GO:0032436","terms_by_termid":{"GO:0032436":null,"GO:1905786":null}}


id: GO:1902085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fumagillin.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"fumagillin metabolic process","termid":"GO:1902084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"fumagillin catabolic process","synonyms":[{"name":"fumagillin breakdown","type":"exact"},{"name":"fumagillin catabolism","type":"exact"},{"name":"fumagillin degradation","type":"exact"}],"termid":"GO:1902085"}


id: FYPO:0006030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable actin cortical patches.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cortical patches present in decreased numbers","termid":"FYPO:0004964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"actin cortical patches absent from cell","synonyms":[{"name":"absent actin cortical patches","type":"exact"},{"name":"actin cortical patches absent from cell during mitotic cell cycle","type":"related"},{"name":"actin cortical patches absent from cell during vegetative growth","type":"exact"},{"name":"actin patches absent from cell","type":"exact"}],"termid":"FYPO:0006030"}


id: MONDO:0016023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular coloboma (obsolete MONDO:0016023)","termid":"MONDO:0016023","xrefs":{"Monarch":{"xref_id":"0016023"}}}


id: GO:1901217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of holin activity.","definition_xrefs":["GOC:bm","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of holin activity (obsolete GO:1901217)","termid":"GO:1901217"}


id: GO:0042990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription factor import into nucleus (obsolete GO:0042990)","synonyms":[{"name":"regulation of transcription factor import into cell nucleus","type":"exact"},{"name":"regulation of transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"regulation of transcription factor-nucleus import","type":"exact"}],"termid":"GO:0042990"}


id: GO:0071027
data:
  {"annotated_genes":["SJAG_00701","SJAG_01176","SJAG_03179","SJAG_03745","SJAG_01867","SJAG_04084","SJAG_02622","SJAG_04006","SJAG_00854","SJAG_00961","SJAG_01830","SJAG_03939","SJAG_03448","SJAG_04824","SJAG_01521","SJAG_04818","SJAG_03984","SJAG_00456","SJAG_01717","SJAG_02621","SJAG_02720","SJAG_02005","SJAG_03680","SJAG_04768","SJAG_02382","SJAG_04601","SJAG_01540","SJAG_00425","SJAG_03883","SJAG_00452","SJAG_04500","SJAG_02879","SJAG_02275","SJAG_04321","SJAG_04574","SJAG_01064","SJAG_01412","SJAG_01529","SJAG_04025","SJAG_01818","SJAG_01331","SJAG_01431","SJAG_01191","SJAG_03047","SJAG_03454","SJAG_02723","SJAG_04153","SJAG_04360","SJAG_04586","SJAG_05243","SJAG_04198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89842,96444,106618,117241],"is_not":false,"summary":null,"term":"GO:0071027"},{"annotations":[88993],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[117236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180036"},{"annotations":[92273,94154,105625,95730,114577,104422,88291,101263,115018,88654,117424,95111,103577,100223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071028"},{"annotations":[117238,112395,92640,96441,106615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[115466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[114682,88049,91568,94197,117239,90001,108939,105469,86711,108408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[87583,91447,105427,117216,101592,109628,113120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"},{"annotations":[117240,102167,110999,114510,112396,91448,98966,111887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"},{"annotations":[95113,112397,115020,92275,96443,103579,101265,91450,114579,87584,117426,104424,105627,106617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071035"},{"annotations":[112398,91451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[112399,91452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"},{"annotations":[108388,86710,103476,106614,110444,98289,117237,91446,91063,95924,108407,90075,90000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[105815],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120272"},{"annotations":[95117,91456,101269,104427,117429,92279,112402,96449,114582,115023,103582,105631,106623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant RNAs within the nucleus.","definition_xrefs":["GOC:dgf","PMID:18644474","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA surveillance","termid":"GO:0071025"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00701":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_01064":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01331":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01529":null,"SJAG_01540":null,"SJAG_01717":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_01867":null,"SJAG_02005":null,"SJAG_02275":null,"SJAG_02382":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03047":null,"SJAG_03179":null,"SJAG_03448":null,"SJAG_03454":null,"SJAG_03680":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04500":null,"SJAG_04574":null,"SJAG_04586":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear RNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RNA quality control","type":"exact"},{"name":"nuclear aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071027","terms_by_termid":{"GO:0033621":null,"GO:0071027":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071035":null,"GO:0071036":null,"GO:0071037":null,"GO:0071038":null,"GO:0071039":null,"GO:0071040":null,"GO:0120271":null,"GO:0120272":null,"GO:0180036":null}}


id: MOD:00059
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N-acetyl-L-proline.","definition_xrefs":["RESID:AA0050","PubMed:2928307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-proline","synonyms":[{"name":"(2S)-1-acetyl-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"1-acetylproline","type":"exact"},{"name":"MOD_RES N-acetylproline","type":"exact"},{"name":"N-acetyl-L-proline","type":"exact"},{"name":"N-acetylated L-proline","type":"exact"},{"name":"N-acetylproline","type":"exact"},{"name":"NAcPro","type":"exact"},{"name":"acetylproline","type":"exact"}],"termid":"MOD:00059"}


id: GO:1904850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of protein localization to telomere.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25467444","GOC:BHF","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to telomere","termid":"GO:0070203"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to chromosome, telomeric region","termid":"GO:1904815"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"negatively_regulates","term_name":"establishment of protein localization to telomere","termid":"GO:0070200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of protein localization to telomere","synonyms":[{"name":"down regulation of establishment of protein localisation to telomere","type":"exact"},{"name":"down regulation of establishment of protein localization to chromosome, telomeric region","type":"exact"},{"name":"down regulation of establishment of protein localization to telomere","type":"exact"},{"name":"down-regulation of establishment of protein localisation to telomere","type":"exact"},{"name":"down-regulation of establishment of protein localization to chromosome, telomeric region","type":"exact"},{"name":"down-regulation of establishment of protein localization to telomere","type":"exact"},{"name":"downregulation of establishment of protein localisation to telomere","type":"exact"},{"name":"downregulation of establishment of protein localization to chromosome, telomeric region","type":"exact"},{"name":"downregulation of establishment of protein localization to telomere","type":"exact"},{"name":"inhibition of establishment of protein localisation to telomere","type":"narrow"},{"name":"inhibition of establishment of protein localization to chromosome, telomeric region","type":"narrow"},{"name":"inhibition of establishment of protein localization to telomere","type":"narrow"},{"name":"negative regulation of establishment of protein localisation to telomere","type":"exact"},{"name":"negative regulation of establishment of protein localization to chromosome, telomeric region","type":"exact"}],"termid":"GO:1904850"}


id: GO:0071866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the occurrence or rate of cell death by apoptotic process in the bone marrow.","definition_xrefs":["GOC:mah","GOC:yaf","GOC:mtg_apoptosis","PMID:17063141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of apoptotic process in bone marrow cell","termid":"GO:0071865"},{"relation_name":"negatively_regulates","term_name":"apoptotic process in bone marrow cell","termid":"GO:0071839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"down regulation of apoptosis in bone marrow","type":"exact"},{"name":"down-regulation of apoptosis in bone marrow","type":"exact"},{"name":"downregulation of apoptosis in bone marrow","type":"exact"},{"name":"inhibition of apoptosis in bone marrow","type":"narrow"},{"name":"negative regulation of apoptosis in bone marrow","type":"narrow"},{"name":"negative regulation of apoptotic process in bone marrow","type":"exact"},{"name":"negative regulation of bone marrow cell apoptosis","type":"exact"},{"name":"negative regulation of bone marrow cell programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of killing of bone marrow cells","type":"exact"},{"name":"negative regulation of programmed cell death of bone marrow cells by apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death, bone marrow cells","type":"exact"}],"termid":"GO:0071866"}


id: MONDO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"progesterone-receptor positive breast cancer","secondary_identifiers":["MEDGEN:1843473","UMLS:C4733094","DOID:0060077"],"termid":"MONDO:0000615","xrefs":{"Monarch":{"xref_id":"0000615"}}}


id: GO:0033517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytic acid, myo-inositol hexakisphosphate, a regulator of intracellular signaling, a highly abundant animal anti-nutrient and a phosphate and mineral storage compound in plant seeds.","definition_xrefs":["PMID:16107538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate metabolic process","synonyms":[{"name":"myo-inositol hexakisphosphate metabolism","type":"exact"},{"name":"phytate metabolic process","type":"exact"},{"name":"phytate metabolism","type":"exact"}],"termid":"GO:0033517"}


id: PBO:0078353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 1-1","termid":"PBO:0078353"}


id: MONDO:0020021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diaphragmatic or abdominal wall malformation (obsolete MONDO:0020021)","secondary_identifiers":["Orphanet:98043"],"termid":"MONDO:0020021","xrefs":{"Monarch":{"xref_id":"0020021"}}}


id: MONDO:0971056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular surface squamous neoplasia","secondary_identifiers":["Orphanet:659744"],"termid":"MONDO:0971056","xrefs":{"Monarch":{"xref_id":"0971056"}}}


id: GO:0030834
data:
  {"annotated_genes":["SJAG_01894","SJAG_01993","SJAG_00279","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91527,98093,87468,113451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of actin filament depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin depolymerization","type":"exact"}],"termid":"GO:0030834","terms_by_termid":{"GO:0051016":null}}


id: GO:0044613
data:
  {"annotated_genes":["SJAG_01013","SJAG_02425","SJAG_03593","SJAG_04721","SJAG_02210","SJAG_02274"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88633,90917,93182,94171,100574,105314],"is_not":false,"summary":null,"term":"GO:0044613"}]},"cv_name":"cellular_component","definition":"The central substructure of the nuclear pore complex (NPC), through which nucleocytoplasmic transport of RNAs, proteins and small molecules occurs. The central transport channel is filled with FG-nucleoporins, which form a selective barrier and provide a series of binding sites for transporter proteins. Characterized S. cerevisiae FG-nucleoporins include Nup159p, Nup145Np, Nup116p, Nup100p, Nsp1p, Nup57p, Nup49p, Nup42p, Nup53p, Nup59p/Asm4p, Nup60p and Nup1. Characterized vertebrate FG-nucleoporins include Nup214, Nup98, Nup62, Nup54, Nup58/45, NLP1, and Nup153.","definition_xrefs":["PMID:18046406","PMID:22419078","PMID:19524430","PMID:20947011","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_03593":null,"SJAG_04721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005643"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005643","GO:0032991"],"is_obsolete":false,"name":"nuclear pore central transport channel","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"karyopherin docking complex","type":"related"},{"name":"nuclear pore central channel","type":"exact"},{"name":"nuclear pore central plug","type":"exact"},{"name":"nuclear pore transport channel","type":"exact"}],"termid":"GO:0044613","terms_by_termid":{"GO:0044613":null}}


id: GO:0099567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed change of free calcium ion concentration in the postsynaptic cytosol via the reversible binding of calcium ions to calcium-binding proteins in the cytosol thereby modulating the spatial and temporal dynamics of changes in postsynaptic cytosolic calcium concentrations.","definition_xrefs":["PMID:24442513","PMID:26190970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion binding involved in regulation of cytosolic calcium ion concentration","termid":"GO:0099510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion binding involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"postsynaptic calcium ion buffering","type":"exact"},{"name":"regulation of postsynaptic cytosolic calcium ion concentration by calcium ion buffering","type":"related"}],"termid":"GO:0099567"}


id: PATO:0000556
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000556 thermoinsensitive (obsolete PATO:0000556)","synonyms":[{"name":"thermoresistant","type":"related"}],"termid":"PATO:0000556"}


id: PBO:0063965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pirin","termid":"PBO:0063965"}


id: PBO:0087809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telobox-containing general regulatory factor; binds TTAGGG repeats within subtelomeric anti-silencing regions (STARs), blocking silent chromatin propagation; binds majority of snoRNA gene promoters, required for full snoRNA expression; caps DSB flanked by long T2AG3 repeats and blocks checkpoint activation","termid":"PBO:0087809"}


id: PBO:0079726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 2 (pseudogene)","termid":"PBO:0079726"}


id: GO:0090605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:di","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"submerged biofilm formation","synonyms":[{"name":"solid substrate biofilm formation","type":"related"}],"termid":"GO:0090605"}


id: PBO:0084248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in GTP biosynthesis, expression is induced by mycophenolic acid resulting in resistance to the drug, expression is repressed by nutrient limitation; IMD2 has a paralog, YAR073W/YAR075W, that arose from a segmental duplication","termid":"PBO:0084248"}


id: PBO:0038659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrosin binding protein","termid":"PBO:0038659"}


id: GO:1990168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K33-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 33 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["PMID:23827681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K33-linked deubiquitination","termid":"GO:1990168"}


id: MONDO:0009472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylation, slow","secondary_identifiers":["MEDGEN:164207","OMIM:243400","UMLS:C0878587"],"synonyms":[{"name":"Fast acetylator phenotype","type":"related"},{"name":"INH inactivation, Fast","type":"related"},{"name":"INH inactivation, slow","type":"related"},{"name":"Isoniazid inactivation, slow","type":"related"},{"name":"acetylation, Fast","type":"related"},{"name":"acetylation, slow","type":"exact"},{"name":"slow acetylator phenotype","type":"related"}],"termid":"MONDO:0009472","xrefs":{"Monarch":{"xref_id":"0009472"}}}


id: MONDO:0013157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of FKRP","termid":"MONDO:0016156"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A5","secondary_identifiers":["DOID:0111241","MEDGEN:461763","OMIM:613153","UMLS:C3150413","GARD:15625"],"synonyms":[{"name":"MDDGA5","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, FKRP-related","type":"related"},{"name":"muscle-eye-brain-FKRP related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 5","type":"related"}],"termid":"MONDO:0013157","xrefs":{"Monarch":{"xref_id":"0013157"}}}


id: PBO:0049540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 4","termid":"PBO:0049540"}


id: MONDO:0020197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete EEC syndrome and related syndrome (obsolete MONDO:0020197)","secondary_identifiers":["Orphanet:98609"],"synonyms":[{"name":"ectrodactyly-ectodermal dysplasia-cleft lip/palate syndrome and related disorders","type":"exact"}],"termid":"MONDO:0020197","xrefs":{"Monarch":{"xref_id":"0020197"}}}


id: GO:0034394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the external part of the cell wall and/or plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell surface","synonyms":[{"name":"protein localisation at cell surface","type":"exact"},{"name":"protein localization at cell surface","type":"exact"}],"termid":"GO:0034394"}


id: GO:0044448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cell cortex, the region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cortex part (obsolete GO:0044448)","termid":"GO:0044448"}


id: MONDO:1011197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited rickets in sheep due to a mutation in the DMP1 gene.","definition_xrefs":["OMIA:001542-9940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited rickets, DMP1-related, sheep","synonyms":[{"name":"hypophosphatemic rickets, autosomal recessive, 1, sheep","type":"related"}],"termid":"MONDO:1011197","xrefs":{"Monarch":{"xref_id":"1011197"}}}


id: PBO:0088921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb5","termid":"PBO:0088921"}


id: MONDO:0859763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis/schwannomatosis","termid":"MONDO:0859008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic neurofibromatosis type 1","secondary_identifiers":["UMLS:C5782097","MEDGEN:1843428","Orphanet:634461"],"termid":"MONDO:0859763","xrefs":{"Monarch":{"xref_id":"0859763"}}}


id: MONDO:0011266
data:
  {"annotated_genes":["SJAG_02043"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85470],"is_not":false,"summary":null,"term":"MONDO:0011266"}]},"cv_name":"mondo","definition":"Myotonic dystrophy type 2 (MD2), also known as proximal myotonic myopathy, is a very rare genetic multi-system disorder of late childhood or adult-onset characterized by mild myotonia, muscle weakness, and rarely cardiac conduction disorders.","definition_xrefs":["Orphanet:606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myotonic dystrophy type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:359.2","MEDGEN:419137","DOID:0050759","NCIT:C84680","NCIT:C122790","icd11.foundation:1005849639","NCIT:C122789","SCTID:41574007","UMLS:C2931689","GARD:9728","OMIM:602668"],"synonyms":[{"name":"CNBP myotonic dystrophy","type":"exact"},{"name":"DM2","type":"related"},{"name":"PROMM","type":"related"},{"name":"dystrophia myotonica 2","type":"related"},{"name":"dystrophia myotonica type 2","type":"related"},{"name":"myotonic dystrophy 2","type":"related"},{"name":"myotonic dystrophy caused by mutation in CNBP","type":"exact"},{"name":"myotonic dystrophy type 2","type":"exact"},{"name":"myotonic myopathy, proximal","type":"related"},{"name":"proximal myotonic dystrophy","type":"exact"},{"name":"proximal myotonic myopathy","type":"exact"},{"name":"ricker disease","type":"exact"},{"name":"ricker syndrome","type":"exact"}],"termid":"MONDO:0011266","terms_by_termid":{"MONDO:0011266":null},"xrefs":{"Monarch":{"xref_id":"0011266"}}}


id: MONDO:0030813
data:
  {"annotated_genes":["SJAG_03181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86200],"is_not":false,"summary":null,"term":"MONDO:0030813"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 101 (varicella zoster virus-specific)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619872","UMLS:C5676983","MEDGEN:1810668"],"synonyms":[{"name":"IMD101","type":"exact"},{"name":"immunodeficiency 101 (varicella zoster virus-specific)","type":"exact"}],"termid":"MONDO:0030813","terms_by_termid":{"MONDO:0030813":null},"xrefs":{"Monarch":{"xref_id":"0030813"}}}


id: MONDO:0020401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital unguarded mitral orifice is a rare, congenital, mitral valve malformation characterized by complete absence of mitral valve leaflets and tensor apparatus at the mitral annulus, which can present clinically with cyanosis, heart murmur, electrocardiogram abnormalities, mild cardiomegaly, or congestive heart failure. Association with heterotaxy, discordant atrioventricular connections, double-outlet right ventricle, pulmonary atresia or stenosis, thin left ventricular wall, and hypoplastic left heart syndrome has been reported.","definition_xrefs":["Orphanet:99060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital unguarded mitral orifice","secondary_identifiers":["icd11.foundation:1824064279","GARD:19627","MEDGEN:576490","UMLS:C0344769"],"termid":"MONDO:0020401","xrefs":{"Monarch":{"xref_id":"0020401"}}}


id: PBO:0054967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2381","termid":"PBO:0054967"}


id: GO:0001097
data:
  {"annotated_genes":["SJAG_00159"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75539],"is_not":false,"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIIH complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["GOC:krc","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TFIIH-class transcription factor complex binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"TFIIH-class transcription factor binding","type":"exact"}],"termid":"GO:0001097","terms_by_termid":{"GO:0001097":null}}


id: GO:0061830
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The concave part of the late spermatid head or spermatozoon head that forms the ventral portion of the head, particularly in some rodent species.","definition_xrefs":["PMID:22332112","PMID:23403943","PMID:26990065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm head","termid":"GO:0061827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"concave side of sperm head","termid":"GO:0061830"}


id: GO:1901608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle transport along microtubule","termid":"GO:1902513"},{"relation_name":"regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of vesicle transport along microtubule","synonyms":[{"name":"regulation of microtubule-based vesicle localization","type":"exact"}],"termid":"GO:1901608"}


id: GO:0150072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arginase activity.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:26670206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of arginase activity","termid":"GO:0150070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of arginase activity","termid":"GO:0150072"}


id: PBO:0043790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylation element binding protein 2","termid":"PBO:0043790"}


id: CHEBI:2639
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amiloride","termid":"CHEBI:2639"}


id: MONDO:0010824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome with 46,XY disorder of sex development characterized by variable degrees of intellectual disability, short stature, severe genital anomalies resulting in sexual ambiguity (such as pseudovaginal perineoscrotal hypospadias and persistence of Müllerian structures), and ocular anomalies (microphthalmia, coloboma). Craniofacial peculiarities (coarse features, deep set eyes), spina bifida, imperforate anus, and sensorineural hearing loss were also described. No new cases have been reported since 1994.","definition_xrefs":["Orphanet:2983"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of sex development-intellectual disability syndrome","secondary_identifiers":["MESH:C535693","OMIM:600122","MEDGEN:325469","SCTID:719450007","GARD:4550","UMLS:C1838611"],"synonyms":[{"name":"Male pseudohermaphroditism intellectual disability syndrome, Verloes type","type":"related"},{"name":"Verloes Gillerot Fryns syndrome","type":"related"},{"name":"Verloes syndrome","type":"related"},{"name":"Verloes-Gillerot-Fryns syndrome","type":"exact"},{"name":"disorder of sex development intellectual disability","type":"related"},{"name":"male pseudohermaphroditism/intellectual disability syndrome, Verloes type","type":"related"},{"name":"male pseudohermaphroditism/mental retardation syndrome, Verloes type","type":"related"},{"name":"pseudohermaphroditism-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0010824","xrefs":{"Monarch":{"xref_id":"0010824"}}}


id: MONDO:0003746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spindle cell melanoma that involves the ciliary body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant ciliary body melanoma","termid":"MONDO:0003912"},{"relation_name":"is_a","term_name":"iris spindle cell melanoma","termid":"MONDO:0004188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"ciliary body spindle cell melanoma","secondary_identifiers":["DOID:6043","UMLS:C1333052","MEDGEN:232367","NCIT:C6117"],"synonyms":[{"name":"ciliary body spindle cell melanoma","type":"exact"},{"name":"spindle cell melanoma of ciliary body","type":"exact"},{"name":"spindle cell melanoma of the ciliary body","type":"exact"}],"termid":"MONDO:0003746","xrefs":{"Monarch":{"xref_id":"0003746"}}}


id: PBO:0066667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPOR3 antisense RNA 1","termid":"PBO:0066667"}


id: PBO:0074210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 3","termid":"PBO:0074210"}


id: PBO:0044192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin A","termid":"PBO:0044192"}


id: PBO:0066578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB pseudogene 2","termid":"PBO:0066578"}


id: PR:Q9USS7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec24D that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.03c","secondary_identifiers":["UniProtKB:Q9USS7"],"synonyms":[{"name":"Spom972h-SEC24D","type":"exact"}],"termid":"PR:Q9USS7"}


id: MONDO:0019764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 4 is a serious congenital respiratory tract anomaly characterized by a cleft extending into the thoracic trachea and possibly down to the carina, with respiratory distress.","definition_xrefs":["Orphanet:93941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 4","secondary_identifiers":["UMLS:C0584827","GARD:19238","MEDGEN:667243"],"synonyms":[{"name":"LTEC IV","type":"exact"},{"name":"LTEC4","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 4","type":"exact"}],"termid":"MONDO:0019764","xrefs":{"Monarch":{"xref_id":"0019764"}}}


id: GO:0099573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The post-synaptic specialization of a glutamatergic excitatory synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glutamatergic postsynaptic density","synonyms":[{"name":"postsynaptic specialization, glutamatergic neuron-to-neuron synapse","type":"exact"}],"termid":"GO:0099573"}


id: GO:0042682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0042681"],"termid":"GO:0042682"}


id: GO:0036150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylserine, through sequential deacylation and re-acylation reactions, to generate phosphatidylserine containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:18287005","PMID:18458083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylserine acyl-chain remodeling","synonyms":[{"name":"phosphatidyl-L-serine acyl-chain remodeling","type":"exact"},{"name":"phosphatidylserine acyl-chain remodelling","type":"exact"}],"termid":"GO:0036150"}


id: PBO:0114647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex DNAJ domain subunit Sec63","termid":"PBO:0114647"}


id: MOD:01696
data:
  {"annotated_genes":["SJAG_00733","SJAG_02522"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[79905,79932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"is_obsolete":false,"name":"alpha-amino acylated residue","references_by_uniquename":{"PMID:36408920":null},"termid":"MOD:01696","terms_by_termid":{"MOD:00050":null}}


id: PBO:0072430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 4","termid":"PBO:0072430"}


id: GO:0015367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: oxoglutarate(out) + malate(in) = oxoglutarate(in) + malate(out).","definition_xrefs":["TC:2.A.29.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"malate transmembrane transporter activity","termid":"GO:0015140"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"oxoglutarate:malate antiporter activity","secondary_identifiers":["Reactome:R-HSA-198440","Reactome:R-HSA-376851"],"synonyms":[{"name":"2-oxoglutarate/malate carrier protein","type":"exact"}],"termid":"GO:0015367"}


id: PBO:0043543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 2","termid":"PBO:0043543"}


id: PBO:0013008
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae RAD54","termid":"PBO:0013008"}


id: GO:0009012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = 3''-adenylylstreptomycin + diphosphate + H+.","definition_xrefs":["EC:2.7.7.47","RHEA:20245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside nucleotidyltransferase activity","termid":"GO:0034068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"aminoglycoside 3''-adenylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02226","MetaCyc:STREPTOMYCIN-3-ADENYLYLTRANSFERASE-RXN"],"synonyms":[{"name":"AAD (3'')","type":"related"},{"name":"ATP:streptomycin 3''-adenylyltransferase activity","type":"narrow"},{"name":"streptomycin 3''-adenylyltransferase activity","type":"narrow"}],"termid":"GO:0009012"}


id: MONDO:0014603
data:
  {"annotated_genes":["SJAG_04719"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84506],"is_not":false,"summary":null,"term":"MONDO:0014603"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the CRYM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04719":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 40","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110566","GARD:18142","OMIM:616357","MEDGEN:896665","UMLS:C4084708"],"synonyms":[{"name":"CRYM autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"DFNA40","type":"narrow"},{"name":"autosomal dominant deafness 40","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 40","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in CRYM","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 40","type":"narrow"},{"name":"autosomal dominant nonsyndromic hearing loss 40","type":"exact"},{"name":"deafness, autosomal dominant 40","type":"narrow"},{"name":"deafness, autosomal dominant type 40","type":"narrow"}],"termid":"MONDO:0014603","terms_by_termid":{"MONDO:0014603":null},"xrefs":{"Monarch":{"xref_id":"0014603"}}}


id: GO:0010252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process that maintains an endogenous steady-state concentration of primary auxin, or constant level of auxin in a biological system, by a number of biochemical processes including transport, biosynthesis, catabolism and conjugation.","definition_xrefs":["PMID:22504182"],"gene_count":0,"genotype_count":0,"name":"obsolete auxin homeostasis (obsolete GO:0010252)","termid":"GO:0010252"}


id: GO:0043934
data:
  {"annotated_genes":["SJAG_00486","SJAG_02712","SJAG_00663","SJAG_03688","SJAG_01769","SJAG_00821","SJAG_02169","SJAG_04901","SJAG_02529","SJAG_04470","SJAG_03250","SJAG_03746","SJAG_02248","SJAG_03536","SJAG_03090","SJAG_04615","SJAG_03057","SJAG_03587","SJAG_05309","SJAG_04271","SJAG_04275","SJAG_00974","SJAG_00826","SJAG_00971","SJAG_04781","SJAG_01017","SJAG_04922","SJAG_00993","SJAG_03013","SJAG_03557","SJAG_04483","SJAG_01321","SJAG_04184","SJAG_04080","SJAG_02320","SJAG_01531","SJAG_04853","SJAG_04010","SJAG_01662","SJAG_02736","SJAG_01483","SJAG_03915","SJAG_02241","SJAG_00405","SJAG_03483","SJAG_04238","SJAG_04859","SJAG_02718","SJAG_00114","SJAG_04868","SJAG_04236","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106875,111841,96064,96132,94565,95716,109262,117657,99912,104284,113060,103303,110653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[93216,110458],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[93662],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[90969,89455,87914,87423],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[108451],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[116909,116917,103346,113215,108224],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[96781,90705,104135,109263,108452],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[116060,113061,104450,118138,90495,96782,99093,98024,99024,117957,109264,99023,96743,106543,117658,100894,94566],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[99025,113062,96744,99026,102098,106876,91495,103304,96065,105990],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[110342],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[101473],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[89937],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[89938],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0043938"},{"annotations":[91389],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[99304,99027,105171,99028,115105,93703],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure. A spore is a structure that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporulation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Spore"],"termid":"GO:0043934","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0043938":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0044515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CZIB divergent transcript","termid":"PBO:0044515"}


id: GO:0098591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The leaflet the apical region of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external side of plasma membrane","termid":"GO:0009897"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0009986"],"is_obsolete":false,"name":"external side of apical plasma membrane","termid":"GO:0098591"}


id: MOD:01062
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because duplicate and redundant with MOD:01061. Remap to MOD:01061","definition_xrefs":["DeltaMass:197"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01062 carboxymethyl cysteinyl (obsolete MOD:01062)","synonyms":[{"name":"Carboxymethyl Cystenyl","type":"exact"}],"termid":"MOD:01062"}


id: MONDO:0008305
data:
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id: PBO:0076504
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id: PBO:0079066
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id: GO:0042017
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id: PBO:0062569
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id: PBO:0076515
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id: GO:0098813
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id: MONDO:0006978
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id: FYPO:0005628
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of cell separation after cytokinesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of cell separation after cytokinesis","synonyms":[{"name":"decreased rate of cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"decreased rate of cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic cytokinetic cell separation","type":"exact"},{"name":"decreased rate of septum digestion after cytokinesis","type":"exact"},{"name":"reduced rate of cell separation after cytokinesis","type":"exact"}],"termid":"FYPO:0005628"}


id: GO:2000895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a hemicellulose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemicellulose metabolic process","termid":"GO:0010410"},{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"hemicellulose catabolic process","synonyms":[{"name":"hemicellulose catabolism","type":"exact"}],"termid":"GO:2000895"}


id: GO:0030775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + glucuronoxylan D-glucuronate = S-adenosyl-L-homocysteine + glucuronoxylan 4-O-methyl-D-glucuronate.","definition_xrefs":["EC:2.1.1.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronoxylan 4-O-methyltransferase activity","secondary_identifiers":["MetaCyc:GLUCURONOXYLAN-4-O-METHYLTRANSFERASE-RXN","RHEA:20413"],"synonyms":[{"name":"S-adenosyl-L-methionine:glucuronoxylan-D-glucuronate 4-O-methyltransferase activity","type":"related"}],"termid":"GO:0030775"}


id: GO:0120023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to somatostatin, a polypeptide hormone involved in regulating pancreatic alpha and pancreatic beta cells and controlling growth hormone secretion as well as many other functions. Somatostatin is produced by several cell types including pancreatic delta cells. There are several different mature forms of somatostatin.","definition_xrefs":["GOC:cvs","PMID:20472043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"somatostatin binding","termid":"GO:0120023"}


id: PBO:0003832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein (predicted)","termid":"PBO:0003832"}


id: MONDO:1012054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniomandibular osteopathy, non-human animal","termid":"MONDO:1011653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniomandibular osteopathy, dog","secondary_identifiers":["OMIA:000236-9615"],"termid":"MONDO:1012054","xrefs":{"Monarch":{"xref_id":"1012054"}}}


id: GO:0098666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of G protein-coupled serotonin receptor activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G protein-coupled serotonin receptor complex","synonyms":[{"name":"G-protein coupled serotonin receptor complex","type":"exact"}],"termid":"GO:0098666"}


id: GO:0033513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate 5-aminopentanamide.","definition_xrefs":["MetaCyc:PWY-5280","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0044248","GO:0006520","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA via 5-aminopentanamide","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA via 5-aminopentanamide","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA via 5-aminopentanamide","type":"exact"}],"termid":"GO:0033513"}


id: PBO:0111830
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PQQ repeat","termid":"PBO:0111830"}


id: GO:0072386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an organelle towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"plus-end-directed organelle transport along microtubule","synonyms":[{"name":"microtubule plus-end-directed organelle distribution","type":"narrow"},{"name":"microtubule plus-end-directed organelle localization","type":"exact"}],"termid":"GO:0072386"}


id: PBO:0055465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2898","termid":"PBO:0055465"}


id: MONDO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the hindlimb long bone.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer affecting bone of limb skeleton","termid":"MONDO:0024311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cancer of long bone of lower limb","secondary_identifiers":["ICD9:170.7","MEDGEN:757711","ICD10CM:C40.2","SCTID:449627008","UMLS:C3265932","DOID:10149"],"synonyms":[{"name":"cancer of hindlimb long bone","type":"exact"},{"name":"hindlimb long bone cancer","type":"exact"},{"name":"long bones of lower limb cancer","type":"related"},{"name":"malignant hindlimb long bone neoplasm","type":"exact"},{"name":"malignant neoplasm of hindlimb long bone","type":"exact"},{"name":"malignant neoplasm of long bones of leg","type":"exact"}],"termid":"MONDO:0000952","xrefs":{"Monarch":{"xref_id":"0000952"}}}


id: GO:2000073
data:
  {"annotated_genes":["SJAG_03309","SJAG_00845","SJAG_02380","SJAG_00256","SJAG_02838","SJAG_01787","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102881,89977,95052,109908,118456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[87063,110518,100571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of site selection that occurs as part of cytokinesis.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinetic process","termid":"GO:0032954"},{"relation_name":"regulates","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00845":null,"SJAG_01787":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of cytokinesis, site selection","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"regulation of site selection involved in cell cycle cytokinesis","type":"exact"}],"termid":"GO:2000073","terms_by_termid":{"GO:1902472":null,"GO:1903617":null}}


id: MONDO:0100380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(4;11)(q21;q23). (A chromosomal abnormality consisting of the translocation of 4q21 with 11q23.)","definition_xrefs":["NCIT:C36365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(4;11)(q21;q23)","synonyms":[{"name":"AML, t(4;11)(q21;q23)","type":"exact"},{"name":"AML, t(4;11)(q21;q23.3)","type":"exact"}],"termid":"MONDO:0100380","xrefs":{"Monarch":{"xref_id":"0100380"}}}


id: PBO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"external_link","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT overexpression expression profiling","termid":"PBO:0018154"}


id: PBO:0070429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 1 homolog","termid":"PBO:0070429"}


id: GO:0044449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a contractile fiber, a fiber composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile fiber part (obsolete GO:0044449)","synonyms":[{"name":"contractile fibre component","type":"exact"},{"name":"muscle fiber component","type":"broad"},{"name":"muscle fibre component","type":"broad"}],"termid":"GO:0044449"}


id: PBO:0027243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polyadenylated_5S_rRNA_level","termid":"PBO:0027243"}


id: MONDO:0007321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of chondrodysplasia punctata.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"non-rhizomelic chondrodysplasia punctata","termid":"MONDO:0015775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant chondrodysplasia punctata","secondary_identifiers":["UMLS:C1442935","OMIM:118650","Orphanet:79344","DOID:0060293","GARD:1298","MEDGEN:303176","MONDO:0022728","MESH:C563248"],"synonyms":[{"name":"chondrodysplasia punctata Sheffield type","type":"exact"},{"name":"chondrodysplasia punctata due to vitamin K deficiency","type":"related"},{"name":"chondrodysplasia punctata due to warfarin teratogenicity","type":"related"},{"name":"chondrodysplasia punctata, Sheffield type","type":"exact"},{"name":"chondrodysplasia punctata, autosomal dominant","type":"exact"}],"termid":"MONDO:0007321","xrefs":{"Monarch":{"xref_id":"0007321"}}}


id: MONDO:0017337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inherited isolated adrenal insufficiency due to partial CYP11A1 deficiency is a rare, genetic, chronic, primary adrenal insufficiency disorder, due to partial loss-of-function CYP11A1 mutations, characterized by early-onset adrenal insufficiency without associated abnormal external male genitalia. Patients present with signs of adrenal crisis, including electrolite abnormalities, severe weakness, recurrent vomiting and seizures. Ultrasound reveals absent (or very small) adrenal glands.","definition_xrefs":["Orphanet:289548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited isolated adrenal insufficiency due to partial CYP11A1 deficiency","secondary_identifiers":["GARD:21143","UMLS:C4707238","MEDGEN:1643960","SCTID:764960005"],"termid":"MONDO:0017337","xrefs":{"Monarch":{"xref_id":"0017337"}}}


id: PBO:0063010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 2","termid":"PBO:0063010"}


id: MONDO:0013913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the TACR3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 11 with or without anosmia","secondary_identifiers":["ICD10CM:E23.0","GARD:15851","MEDGEN:766758","UMLS:C3553844","OMIM:614840","DOID:0090071"],"synonyms":[{"name":"HH11","type":"related"},{"name":"TACR3 hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 11 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in TACR3","type":"exact"}],"termid":"MONDO:0013913","xrefs":{"Monarch":{"xref_id":"0013913"}}}


id: PBO:0068619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 71, pseudogene","termid":"PBO:0068619"}


id: MOD:01172
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-alanyl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["RESID:AA0424","PubMed:12626404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:00764","MOD:01155"],"is_obsolete":false,"name":"N-alanyl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSIAla","type":"exact"},{"name":"LIPID GPI-like-anchor amidated alanine","type":"exact"},{"name":"N-alanyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:01172"}


id: PBO:0057459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 578","termid":"PBO:0057459"}


id: PBO:0058945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 4","termid":"PBO:0058945"}


id: MOD:00447
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a glucuronic acid either through a carboxyl group amide or ester bond, or through C1-glycosylation.","definition_xrefs":["DeltaMass:0","PubMed:7398618","Unimod:54#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-glucuronylated residue","synonyms":[{"name":"Glucuronyl","type":"related"},{"name":"N-Glucuronyl (N terminus)","type":"exact"},{"name":"N-glucuronylation","type":"related"}],"termid":"MOD:00447"}


id: PBO:0028831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Mei2_nuclear_dot_absent_from_cell","termid":"PBO:0028831"}


id: GO:0015055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with secretin to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"secretin receptor activity","termid":"GO:0015055"}


id: MONDO:0005881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lower than normal quantity of amniotic fluid in the amniotic sac as compared to normal values. Typically associated with an amniotic fluid index (AFI) of less than 5 cm or a single maximum vertical pocket (MVP) of less than 2 cm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligohydramnios","secondary_identifiers":["UMLS:C0079924","EFO:0007401","MESH:D016104","ICD9:658.00","ICD9:658.0","SCTID:59566000","DOID:12215","HP:0001562","icd11.foundation:262953341","MEDGEN:86974"],"synonyms":[{"name":"antepartum oligohydramnios","type":"exact"},{"name":"delivered oligohydramnios","type":"exact"},{"name":"oligohydramnios","type":"exact"},{"name":"oligohydramnios (disease)","type":"exact"},{"name":"oligohydramnios - delivered","type":"exact"}],"termid":"MONDO:0005881","xrefs":{"Monarch":{"xref_id":"0005881"}}}


id: GO:0021652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 1. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","GOC:curators","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 1 morphogenesis","termid":"GO:0021651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 formation","termid":"GO:0021652"}


id: PBO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z8","termid":"PBO:0000424"}


id: PBO:0067246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 319, pseudogene","termid":"PBO:0067246"}


id: MONDO:0002503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytic tumor occurring during adulthood. Representative examples include diffuse astrocytoma, anaplastic astrocytoma, and glioblastoma.","definition_xrefs":["NCIT:C7049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult astrocytic tumor","secondary_identifiers":["MEDGEN:272290","DOID:3076","UMLS:C1332183"],"synonyms":[{"name":"adult astrocytic neoplasm","type":"exact"},{"name":"adult astrocytic tumor","type":"exact"},{"name":"adult astrocytoma","type":"exact"},{"name":"astrocytic tumor","type":"broad"},{"name":"astrocytic tumour","type":"broad"}],"termid":"MONDO:0002503","xrefs":{"Monarch":{"xref_id":"0002503"}}}


id: MONDO:1010635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor X deficiency that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor X deficiency, non-human animal","termid":"MONDO:1010072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor X deficiency, domestic cat","secondary_identifiers":["OMIA:000362-9685"],"termid":"MONDO:1010635","xrefs":{"Monarch":{"xref_id":"1010635"}}}


id: GO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated via heterotrimeric G-proteins.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IB (obsolete GO:0004433)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IB","type":"exact"}],"termid":"GO:0004433"}


id: PBO:0087485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); a complex required for loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during DSB repair via histone H2AX; promotes gene expression program that supports translational fidelity; evolutionarily-conserved adherin; relocalizes to cytosol in response to hypoxia; human disorder Cornelia de Lange syndrome is caused by mutations in NIPBL, the human ortholog of SCC2; conserved role in NHEJ","termid":"PBO:0087485"}


id: GO:0015821
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92529],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of methionine, 2-amino-4-(methylthio)butanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transport","termid":"GO:0000101"},{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"methionine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-methionine transport","type":"narrow"}],"termid":"GO:0015821","terms_by_termid":{"GO:1905626":null}}


id: PBO:0056850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 2","termid":"PBO:0056850"}


id: PBO:0077864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 5","termid":"PBO:0077864"}


id: MONDO:0008909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorder of glycosylation, type i/IIx","secondary_identifiers":["UMLS:C0349655","MEDGEN:91162","MESH:C562844","OMIM:212067"],"synonyms":[{"name":"CDG X","type":"related"},{"name":"CDG-X","type":"related"},{"name":"congenital disorder of glycosylation type I/IIX","type":"related"},{"name":"congenital disorder of glycosylation, type i/IIx","type":"exact"}],"termid":"MONDO:0008909","xrefs":{"Monarch":{"xref_id":"0008909"}}}


id: PBO:0042812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 2","termid":"PBO:0042812"}


id: MONDO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Baraitser Rodeck garner syndrome (obsolete MONDO:0021971)","termid":"MONDO:0021971","xrefs":{"Monarch":{"xref_id":"0021971"}}}


id: GO:0048563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Morphogenesis, during the post-embryonic phase, of an animal tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete post-embryonic animal organ morphogenesis (obsolete GO:0048563)","termid":"GO:0048563"}


id: PBO:0043454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 3 pseudogene 1","termid":"PBO:0043454"}


id: PBO:0054136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1502","termid":"PBO:0054136"}


id: MONDO:0006496
data:
  {"annotated_genes":["SJAG_02658","SJAG_00885","SJAG_01159","SJAG_03866","SJAG_04292","SJAG_02615","SJAG_04816","SJAG_00564","SJAG_04628","SJAG_04913","SJAG_03320","SJAG_05289","SJAG_04110","SJAG_00308","SJAG_02322","SJAG_03457","SJAG_04506","SJAG_00199","SJAG_00660","SJAG_02306","SJAG_03895","SJAG_01537","SJAG_00773","SJAG_04183","SJAG_04537","SJAG_01854","SJAG_01857","SJAG_04566","SJAG_04757","SJAG_04123","SJAG_02050","SJAG_04665","SJAG_04145","SJAG_04325","SJAG_06022","SJAG_01848","SJAG_01530"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84244,84245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[86216,86215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014975"},{"annotations":[86482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030669"},{"annotations":[84663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014567"},{"annotations":[84878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009748"},{"annotations":[84931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011489"},{"annotations":[86284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011532"},{"annotations":[84403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[84408,84406,84407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012256"},{"annotations":[84294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012476"},{"annotations":[84413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012453"},{"annotations":[86267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012866"},{"annotations":[85537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012787"},{"annotations":[85726,85725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008438"},{"annotations":[85985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012928"},{"annotations":[84510,84509,84511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014018"},{"annotations":[84508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014020"},{"annotations":[84870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014305"},{"annotations":[84854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014282"},{"annotations":[84341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014644"},{"annotations":[85345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014882"},{"annotations":[85716,85717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[84357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[84325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014679"},{"annotations":[85758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[84389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[84760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[85573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[84352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[85644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[85286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"},{"annotations":[85970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012651"},{"annotations":[85756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957221"},{"annotations":[85266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957958"},{"annotations":[85924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032906"},{"annotations":[85268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030482"},{"annotations":[85312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030512"},{"annotations":[86064,86063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031019"},{"annotations":[85561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957308"},{"annotations":[85562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957309"}]},"cv_name":"mondo","definition":"A general term most often used to describe severe or complete loss of muscle strength due to motor system disease from the level of the cerebral cortex to the muscle fiber. This term may also occasionally refer to a loss of sensory function. (From Adams et al., Principles of Neurology, 6th ed, p45)","definition_xrefs":["MESH:D010243"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00308":null,"SJAG_00564":null,"SJAG_00660":null,"SJAG_00773":null,"SJAG_00885":null,"SJAG_01159":null,"SJAG_01530":null,"SJAG_01537":null,"SJAG_01848":null,"SJAG_01854":null,"SJAG_01857":null,"SJAG_02050":null,"SJAG_02306":null,"SJAG_02322":null,"SJAG_02615":null,"SJAG_02658":null,"SJAG_03320":null,"SJAG_03457":null,"SJAG_03866":null,"SJAG_03895":null,"SJAG_04110":null,"SJAG_04123":null,"SJAG_04145":null,"SJAG_04183":null,"SJAG_04292":null,"SJAG_04325":null,"SJAG_04506":null,"SJAG_04537":null,"SJAG_04566":null,"SJAG_04628":null,"SJAG_04665":null,"SJAG_04757":null,"SJAG_04816":null,"SJAG_04913":null,"SJAG_05289":null,"SJAG_06022":null},"genotype_count":0,"is_obsolete":false,"name":"palsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000631","ICD10CM:G80-G83","UMLS:C3887651","MEDGEN:854494","Wikipedia:Palsy"],"synonyms":[{"name":"Plegia","type":"exact"},{"name":"Plegias","type":"exact"}],"termid":"MONDO:0006496","terms_by_termid":{"MONDO:0008438":null,"MONDO:0009748":null,"MONDO:0009783":null,"MONDO:0010043":null,"MONDO:0011006":null,"MONDO:0011489":null,"MONDO:0011532":null,"MONDO:0012238":null,"MONDO:0012256":null,"MONDO:0012453":null,"MONDO:0012476":null,"MONDO:0012651":null,"MONDO:0012787":null,"MONDO:0012866":null,"MONDO:0012928":null,"MONDO:0013117":null,"MONDO:0014018":null,"MONDO:0014020":null,"MONDO:0014062":null,"MONDO:0014282":null,"MONDO:0014305":null,"MONDO:0014567":null,"MONDO:0014644":null,"MONDO:0014656":null,"MONDO:0014679":null,"MONDO:0014702":null,"MONDO:0014882":null,"MONDO:0014975":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0030482":null,"MONDO:0030512":null,"MONDO:0030669":null,"MONDO:0031019":null,"MONDO:0032906":null,"MONDO:0957221":null,"MONDO:0957308":null,"MONDO:0957309":null,"MONDO:0957958":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0006496"}}}


id: FYPO:0001578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing a dipeptide such as Leu-Ala as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on dipeptide nitrogen source","synonyms":[{"name":"normal cell population growth on dipeptide nitrogen source","type":"exact"},{"name":"normal dipeptide utilization","type":"related"},{"name":"normal vegetative cell population growth on dipeptide nitrogen source","type":"exact"}],"termid":"FYPO:0001578"}


id: PBO:0026835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_polymerase_activity","termid":"PBO:0026835"}


id: PBO:0027581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_DNA","termid":"PBO:0027581"}


id: GO:0036207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of expression of a histone-encoding gene. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein.","definition_xrefs":["GOC:bf","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone gene expression (obsolete GO:0036207)","synonyms":[{"name":"activation of histone gene expression","type":"narrow"},{"name":"positive regulation of expression of histone-encoding gene","type":"exact"},{"name":"up-regulation of histone gene expression","type":"exact"},{"name":"upregulation of histone gene expression","type":"exact"}],"termid":"GO:0036207"}


id: PBO:0087047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L22A; required for translation of long 5' UTR of IME1 mRNA and meiotic entry; autoregulates splicing of its pre-m-RNA; homologous to mammalian ribosomal protein L22, no bacterial homolog; RPL22B has a paralog, RPL22A, that arose from the whole genome duplication","termid":"PBO:0087047"}


id: FYECO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nitrogen was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited nitrogen","synonyms":[{"name":"nitrogen starvation","type":"related"}],"termid":"FYECO:0000090"}


id: MONDO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of breast fibroadenoma without clinical significance. It is characterized by distortion and compression of the ducts by proliferating stromal cells.","definition_xrefs":["NCIT:C4271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibroadenoma","termid":"MONDO:0002056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast intracanalicular fibroadenoma","secondary_identifiers":["MEDGEN:137772","DOID:2656","ICDO:9011/0","UMLS:C0334496"],"synonyms":[{"name":"breast intracanalicular fibroadenoma","type":"exact"},{"name":"intracanalicular breast fibroadenoma","type":"exact"},{"name":"intracanalicular fibroadenoma","type":"exact"},{"name":"intracanalicular fibroadenoma of breast","type":"exact"},{"name":"intracanalicular fibroadenoma of the breast","type":"exact"}],"termid":"MONDO:0002377","xrefs":{"Monarch":{"xref_id":"0002377"}}}


id: PBO:0051684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS3 and NABP interacting protein","termid":"PBO:0051684"}


id: PBO:0027655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation_during_mitotic_G2_phase","termid":"PBO:0027655"}


id: MONDO:1010864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidosis, non-human animal","termid":"MONDO:1010172"},{"relation_name":"is_a","term_name":"lysosomal storage disease, domestic cat","termid":"MONDO:1010861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidosis, domestic cat","secondary_identifiers":["OMIA:000625-9685"],"termid":"MONDO:1010864","xrefs":{"Monarch":{"xref_id":"1010864"}}}


id: PBO:0089456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein Ent3","termid":"PBO:0089456"}


id: GO:0106193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic cations and their chelates linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic cations and their chelates linked to the hydrolysis of a diphosphate (obsolete GO:0106193)","termid":"GO:0106193"}


id: GO:0051257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the spindle midzone, the area in the center of the spindle where the spindle microtubules from opposite poles overlap, as a part of the process of meiosis.","definition_xrefs":["GOC:ai","GOC:tb","GOC:expert_rg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone assembly","termid":"GO:0051255"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0000226","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"meiotic spindle midzone assembly","synonyms":[{"name":"meiotic spindle midzone biogenesis","type":"exact"},{"name":"meiotic spindle midzone biosynthesis","type":"exact"},{"name":"meiotic spindle midzone formation","type":"exact"},{"name":"spindle midzone assembly involved in meiosis","type":"exact"},{"name":"spindle midzone biogenesis involved in meiosis","type":"exact"},{"name":"spindle midzone biosynthesis involved in meiosis","type":"exact"},{"name":"spindle midzone formation involved in meiosis","type":"exact"}],"termid":"GO:0051257"}


id: MONDO:0020799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic proliferation of basal cells in the epidermis (part of the skin) or other anatomic sites (most frequently the salivary glands). The basal cell neoplastic proliferation in the epidermis results in basal cell carcinomas. The basal cell neoplastic proliferation in the salivary glands can be benign, resulting in basal cell adenomas or malignant, resulting in basal cell adenocarcinomas.","definition_xrefs":["NCIT:C3784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell neoplasm","secondary_identifiers":["SCTID:127570002","EFO:1001763","UMLS:C0206710","ICDO:8090/1","MEDGEN:104921","MESH:D018295"],"synonyms":[{"name":"basal cell tumor","type":"exact"},{"name":"basal cell tumour","type":"exact"},{"name":"neoplasm, basal cell","type":"related"}],"termid":"MONDO:0020799","xrefs":{"Monarch":{"xref_id":"0020799"}}}


id: MONDO:0018374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"avascular necrosis","termid":"MONDO:0018373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary avascular necrosis","secondary_identifiers":["GARD:21659","UMLS:C5680036","Orphanet:399169","MEDGEN:1842971"],"synonyms":[{"name":"secondary AVN","type":"exact"}],"termid":"MONDO:0018374","xrefs":{"Monarch":{"xref_id":"0018374"}}}


id: PATO:0001851
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's exhibiting transient abnormal enlargement, not due to cell proliferation.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"has_part","term_name":"protruding","termid":"PATO:0001598"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swollen","synonyms":[{"name":"swelling","type":"narrow"}],"termid":"PATO:0001851"}


id: MOD:01268
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15549660","Unimod:271#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site T","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01268"}


id: GO:0002433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response-regulating cell surface receptor signaling pathway that contributes to the endocytic engulfment of external particulate material by phagocytes.","definition_xrefs":["ISBN:0781735149","GOC:add","GO_REF:0000022","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway","termid":"GO:0002768"},{"relation_name":"part_of","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"immune response-regulating cell surface receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"immune response-regulating cell surface receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"phagocytosis triggered by activation of immune response cell surface activating receptor","type":"exact"}],"termid":"GO:0002433"}


id: GO:0098996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell capsule to allow entry into the host cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell envelope","termid":"GO:0098933"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell glycocalyx","secondary_identifiers":["VZ:3938"],"synonyms":[{"name":"catabolism of host glycocalyx during viral entry","type":"exact"},{"name":"degradation of host capsule during virus entry","type":"exact"},{"name":"degradation of host glycocalyx during viral entry","type":"exact"},{"name":"disassembly of glycocalyx during viral entry","type":"exact"},{"name":"disruption of host cell glycocalyx during viral entry","type":"exact"},{"name":"symbiont entry into host cell by disruption of host cell capsule","type":"exact"}],"termid":"GO:0098996"}


id: MONDO:1011213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"coloboma, non-human animal","termid":"MONDO:1010319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, chicken","secondary_identifiers":["OMIA:000219-9031"],"termid":"MONDO:1011213","xrefs":{"Monarch":{"xref_id":"1011213"}}}


id: PBO:0011418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_penetrance","termid":"PBO:0011418"}


id: MONDO:0024711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mixed epithelial stromal tumor of the kidney with malignant stromal features.","definition_xrefs":["NCIT:C37265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"mixed epithelial stromal tumor of the kidney","termid":"MONDO:0002386"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"malignant mixed epithelial stromal tumor of the kidney","secondary_identifiers":["UMLS:C1334602","MEDGEN:233156"],"synonyms":[{"name":"malignant MEST","type":"exact"},{"name":"malignant mixed epithelial stromal tumor of the kidney","type":"exact"},{"name":"mixed epithelial stromal tumor of the kidney, malignant","type":"exact"},{"name":"mixed epithelial stromal tumour of the kidney, malignant","type":"exact"}],"termid":"MONDO:0024711","xrefs":{"Monarch":{"xref_id":"0024711"}}}


id: PBO:0089610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, 5' UTR  of Atp19","termid":"PBO:0089610"}


id: GO:0101020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estrogen + reduced [NADPH--hemoprotein reductase] + O2 = 16-alpha-hydroxyestrogen + oxidized [NADPH--hemoprotein reductase] + H2O.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"estrogen 16-alpha-hydroxylase activity","synonyms":[{"name":"oestrogen 16-alpha-hydroxylase activity","type":"exact"}],"termid":"GO:0101020"}


id: RO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some causal role for the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causes_condition","termid":"RO:0003303"}


id: GO:0043117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular permeability","synonyms":[{"name":"activation of vascular permeability","type":"narrow"},{"name":"stimulation of vascular permeability","type":"narrow"},{"name":"up regulation of vascular permeability","type":"exact"},{"name":"up-regulation of vascular permeability","type":"exact"},{"name":"upregulation of vascular permeability","type":"exact"}],"termid":"GO:0043117"}


id: GO:0023004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the dopamine receptor protein signaling pathway through stimulation of the dopamine receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of dopamine receptor signaling pathway (obsolete GO:0023004)","synonyms":[{"name":"activation of dopamine receptor signaling pathway","type":"exact"},{"name":"activation of dopamine receptor signalling pathway","type":"exact"},{"name":"initiation of dopamine receptor signaling pathway","type":"related"},{"name":"stimulation of dopamine receptor signaling pathway","type":"exact"}],"termid":"GO:0023004"}


id: PBO:0040476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 1","termid":"PBO:0040476"}


id: GO:0006313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of transposition in which a transposable element (transposon) is moved to another part of a genome, either by a cut-and-paste mechanism or a replicative mechanism.","definition_xrefs":["PMID:30416149","PMID:32588192","ISBN:1555812090","PMID:26846462","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"},{"relation_name":"is_a","term_name":"transposition","termid":"GO:0032196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"DNA transposition","secondary_identifiers":["Wikipedia:Transposable_element","Wikipedia:Transposase","GO:0006317","GO:0006318"],"synonyms":[{"name":"Class II transposition","type":"exact"},{"name":"transposition, DNA-mediated","type":"exact"}],"termid":"GO:0006313"}


id: GO:0003910
data:
  {"annotated_genes":["SJAG_02527","SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91764,113027],"is_not":false,"summary":null,"term":"GO:0003910"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m).","definition_xrefs":["EC:6.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA ligase activity","termid":"GO:0003909"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA ligase (ATP) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DNA-LIGASE-ATP-RXN"],"synonyms":[{"name":"DNA joinase activity","type":"broad"},{"name":"DNA repair enzyme activity","type":"related"},{"name":"DNA-joining enzyme","type":"related"},{"name":"deoxyribonucleate ligase","type":"broad"},{"name":"deoxyribonucleic acid joinase","type":"broad"},{"name":"deoxyribonucleic acid ligase","type":"broad"},{"name":"deoxyribonucleic acid repair enzyme","type":"related"},{"name":"deoxyribonucleic acid-joining enzyme","type":"related"},{"name":"deoxyribonucleic joinase","type":"broad"},{"name":"deoxyribonucleic ligase","type":"broad"},{"name":"deoxyribonucleic repair enzyme","type":"related"},{"name":"deoxyribonucleic-joining enzyme","type":"related"},{"name":"poly(deoxyribonucleotide):poly(deoxyribonucleotide) ligase (AMP-forming)","type":"related"},{"name":"polydeoxyribonucleotide synthase (ATP) activity","type":"related"},{"name":"polynucleotide ligase","type":"broad"},{"name":"polynucleotide ligase (ATP) activity","type":"related"},{"name":"sealase activity","type":"related"}],"termid":"GO:0003910","terms_by_termid":{"GO:0003910":null}}


id: GO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to self antigen","synonyms":[{"name":"down regulation of tolerance induction to self antigen","type":"exact"},{"name":"down-regulation of tolerance induction to self antigen","type":"exact"},{"name":"downregulation of tolerance induction to self antigen","type":"exact"},{"name":"inhibition of tolerance induction to self antigen","type":"narrow"}],"termid":"GO:0002650"}


id: PBO:0031573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_vegetative_cell","termid":"PBO:0031573"}


id: MOD:01658
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, dabsyl chloride, to form an alpha-amino-Dabsyl-derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dabsyl chloride derivatized residue","termid":"MOD:01656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dabsyl derivatized residue","synonyms":[{"name":"N2DabsylRes","type":"exact"}],"termid":"MOD:01658"}


id: PBO:0076457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 3","termid":"PBO:0076457"}


id: PBO:0067428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 547, pseudogene","termid":"PBO:0067428"}


id: GO:1904764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a chaperone-mediated autophagy translocation complex into its constituent components.","definition_xrefs":["PMID:18644871","GOC:PARL","GO_REF:0000079","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex disassembly","synonyms":[{"name":"CMA receptor complex disassembly","type":"related"},{"name":"CMA translocation complex disassembly","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex disassembly","type":"related"}],"termid":"GO:1904764"}


id: MONDO:0006586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which patients produce skin lesions through repetitive, compulsive excoriation of their skin.","definition_xrefs":["EFO:1000741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"neurotic excoriation","secondary_identifiers":["DOID:9165","SCTID:402736003","UMLS:C1274184","ICD9:698.4","Wikipedia:Neurotic_excoriations","ICD9:300.19","MEDGEN:697535"],"synonyms":[{"name":"dermatitis artefacta","type":"exact"},{"name":"dermatitis factitia","type":"exact"},{"name":"dermatitis factitia [artefacta]","type":"exact"},{"name":"dermatitis ficta","type":"exact"},{"name":"factitious skin disease","type":"exact"}],"termid":"MONDO:0006586","xrefs":{"Monarch":{"xref_id":"0006586"}}}


id: PBO:0084466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase-responsive inhibitor of the Ste12p transcription factor; involved in the regulation of mating-specific genes and the invasive growth pathway; related regulators Dig1p and Dig2p bind to Ste12p; DIG2 has a paralog, DIG1, that arose from the whole genome duplication","termid":"PBO:0084466"}


id: GO:0032678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-9 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-9 production","termid":"GO:0032638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-9 production","secondary_identifiers":["GO:0045417"],"synonyms":[{"name":"regulation of IL-9 production","type":"exact"},{"name":"regulation of interleukin-9 biosynthetic process","type":"narrow"}],"termid":"GO:0032678"}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: PBO:0049808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 2","termid":"PBO:0049808"}


id: FYECO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that specifies one or more chemical(s) that are added to, or excluded from, growth medium, assay buffer, etc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemical added or excluded","secondary_identifiers":["FYECO:0000019","FYECO:0000017","FYECO:0000020"],"synonyms":[{"name":"chemical added","type":"related"},{"name":"chemicals","type":"related"}],"termid":"FYECO:0000059"}


id: MONDO:0024237
data:
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id: SO:0002022
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small RNA molecule, 22-23 nt in size, that is the product of a longer RNA. The production of priRNAs is independent of dicer and involves binding of RNA by argonaute and trimming by triman. In fission yeast, priRNAs trigger the establishment of heterochromatin. PriRNAs are primarily generated from centromeric transcripts (dg and dh repeats), but may also be produced from degradation products of primary transcripts.","definition_xrefs":["PMID:24095277","PMID:20178743","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priRNA","synonyms":[{"name":"primal small RNA","type":"exact"}],"termid":"SO:0002022"}


id: MONDO:0007602
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete favism, susceptibility to (obsolete MONDO:0007602)","secondary_identifiers":["OMIM:134700"],"synonyms":[{"name":"favism, susceptibility to","type":"exact"},{"name":"moved to {300908}","type":"related"}],"termid":"MONDO:0007602","xrefs":{"Monarch":{"xref_id":"0007602"}}}


id: PBO:0027702
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolar_chromatin_organization","termid":"PBO:0027702"}


id: PBO:0081353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 175","termid":"PBO:0081353"}


id: PR:Q9P7R8
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gea1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7R8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C211.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.03c","synonyms":[{"name":"Spom972h-gea1","type":"exact"}],"termid":"PR:Q9P7R8"}


id: MONDO:0800319
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration","termid":"MONDO:0004580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone dystrophy 5, X-linked","secondary_identifiers":["UMLS:C3887937","MEDGEN:854645"],"synonyms":[{"name":"COD5","type":"exact"}],"termid":"MONDO:0800319","xrefs":{"Monarch":{"xref_id":"0800319"}}}


id: PBO:0060091
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 38","termid":"PBO:0060091"}


id: MONDO:0011559
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  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86014],"is_not":false,"summary":null,"term":"MONDO:0011559"},{"annotations":[86137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign recurrent intrahepatic cholestasis","termid":"MONDO:0019008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"benign recurrent intrahepatic cholestasis type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:99961","DOID:0070232","UMLS:C2608083","GARD:10029","MEDGEN:435857","MESH:C535934","OMIM:605479"],"synonyms":[{"name":"BRIC2","type":"exact"},{"name":"Bric type 2","type":"exact"},{"name":"benign recurrent intrahepatic cholestasis 2","type":"related"},{"name":"cholestasis, benign recurrent intrahepatic 2","type":"related"},{"name":"cholestasis, benign recurrent intrahepatic, 2","type":"related"},{"name":"cholestasis, benign recurrent intrahepatic, type 2","type":"exact"},{"name":"mild ABCB11 deficiency","type":"related"},{"name":"recurrent familial intrahepatic cholestasis 2","type":"related"}],"termid":"MONDO:0011559","terms_by_termid":{"MONDO:0011156":null,"MONDO:0011559":null},"xrefs":{"Monarch":{"xref_id":"0011559"}}}


id: PBO:0048233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2D","termid":"PBO:0048233"}


id: GO:0018620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + phthalate = cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylate + NAD+.","definition_xrefs":["EC:1.14.12.7","RHEA:17489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phthalate 4,5-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03630","UM-BBD_reactionID:r0102","MetaCyc:PHTHALATE-45-DIOXYGENASE-RXN"],"synonyms":[{"name":"PDO activity","type":"related"},{"name":"phthalate dioxygenase activity","type":"broad"},{"name":"phthalate,NADH:oxygen oxidoreductase (4,5-hydroxylating)","type":"related"}],"termid":"GO:0018620"}


id: PBO:0038351
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_positive_regulatory_component_activity","termid":"PBO:0038351"}


id: GO:1901923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sclerotium development.","definition_xrefs":["PMID:21148914","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of sclerotium development","termid":"GO:1901922"},{"relation_name":"negatively_regulates","term_name":"sclerotium development","termid":"GO:1990045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sclerotium development","synonyms":[{"name":"down regulation of sclerotium development","type":"exact"},{"name":"down-regulation of sclerotium development","type":"exact"},{"name":"downregulation of sclerotium development","type":"exact"},{"name":"inhibition of sclerotium development","type":"narrow"}],"termid":"GO:1901923"}


id: MONDO:0000756
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal rhabdomyosarcoma located in the parameningeal region.","definition_xrefs":["PMID:23021437","PMID:10717216","DOID:0060338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"parameningeal embryonal rhabdomyosarcoma","termid":"MONDO:0000756","xrefs":{"Monarch":{"xref_id":"0000756"}}}


id: MONDO:0005322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fractures of the larger bone of the forearm.","definition_xrefs":["MESH:D014458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulna fracture","secondary_identifiers":["SCTID:54556006","EFO:0003950"],"synonyms":[{"name":"bone fracture of ulna","type":"exact"},{"name":"ulna bone fracture","type":"exact"}],"termid":"MONDO:0005322","xrefs":{"Monarch":{"xref_id":"0005322"}}}


id: FYPO:0007854
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during anaphase of meiosis I.","definition_xrefs":["PomBase:mah","PMID:11331883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during meiosis I","termid":"FYPO:0004214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to kinetochore during meiotic anaphase I","synonyms":[{"name":"normal protein localisation to kinetochore during meiotic anaphase I","type":"exact"},{"name":"normal protein localization to kinetochore during meiosis I anaphase","type":"exact"}],"termid":"FYPO:0007854"}


id: PBO:0031185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_thiamine_level","termid":"PBO:0031185"}


id: GO:1901922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sclerotium development.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:21148914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sclerotium development","termid":"GO:1990045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sclerotium development","termid":"GO:1901922"}


id: MONDO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic nodular lesion that arises from the gingiva. It is composed of epithelial cells lining connective tissue stroma.","definition_xrefs":["NCIT:C4693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epulis","termid":"MONDO:0003396"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival fibroepithelial polyp","secondary_identifiers":["UMLS:C0399441","MEDGEN:98314","icd11.foundation:1520492305","SCTID:235001002"],"synonyms":[{"name":"fibroepithelial polyp of gingiva","type":"exact"},{"name":"fibroepithelial polyp of gum","type":"exact"},{"name":"fibroepithelial polyp of the gingiva","type":"exact"},{"name":"fibroepithelial polyp of the gum","type":"exact"},{"name":"gingival fibroepithelial polyp","type":"exact"},{"name":"gum fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0060768","xrefs":{"Monarch":{"xref_id":"0060768"}}}


id: MONDO:0013124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pelvic organ prolapse","termid":"MONDO:0000082"},{"relation_name":"excluded_subClassOf","term_name":"peeling skin syndrome","termid":"MONDO:0019347"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic organ prolapse, susceptibility to, 2","secondary_identifiers":["OMIM:613088","UMLS:C2751314","MEDGEN:416523"],"synonyms":[{"name":"Pvop2","type":"related"},{"name":"pelvic organ prolapse, susceptibility to, 2","type":"exact"},{"name":"pelvic organ prolapse, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013124","xrefs":{"Monarch":{"xref_id":"0013124"}}}


id: GO:1901192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of formation of translation initiation ternary complex","termid":"GO:1901190"},{"relation_name":"positively_regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of translation initiation ternary complex","synonyms":[{"name":"activation of formation of translation initiation ternary complex","type":"narrow"},{"name":"activation of translation initiation ternary complex assembly","type":"exact"},{"name":"positive regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"up regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"up regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"up-regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"up-regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"upregulation of formation of translation initiation ternary complex","type":"exact"},{"name":"upregulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901192"}


id: GO:0031250
data:
  {"annotated_genes":["SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71217],"is_not":false,"summary":null,"term":"GO:0031250"}]},"cv_name":"cellular_component","definition":"An enzyme complex composed of 4 subunits, 2 copies of the large protein (nrdD in E. coli) and 2 copies of the small protein (nrdG in E. coli). It catalyzes the generation of 2'deoxyribonucleotides under anaerobic growth conditions. The larger subunit is the catalytic unit that is activated by the smaller iron-binding subunit.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"anaerobic ribonucleoside-triphosphate reductase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031250","terms_by_termid":{"GO:0031250":null}}


id: PBO:0073741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 1","termid":"PBO:0073741"}


id: RO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some causal or contributing role that influences the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causes_or_contributes_to_condition","termid":"RO:0003302"}


id: GO:0035227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of glutamate-cysteine ligase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glutamate-cysteine ligase activity","termid":"GO:0035227"}


id: GO:0075523
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65136],"is_not":false,"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A process which occurs during viral translation, which involves a translational recoding mechanism called programmed ribosomal frameshifting. This causes the ribosome to alter its reading of the mRNA to an a different open reading frame to produce alternate viral proteins.","definition_xrefs":["GOC:bf","PMID:24825891","VZ:860","GOC:ch","PMID:8852897","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral translational frameshifting","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"ribosomal frameshifting involved in viral translation","type":"exact"}],"termid":"GO:0075523","terms_by_termid":{"GO:0075523":null}}


id: GO:1901889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell junction assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"negatively_regulates","term_name":"cell junction assembly","termid":"GO:0034329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of cell junction assembly","synonyms":[{"name":"down regulation of cell junction assembly","type":"exact"},{"name":"down-regulation of cell junction assembly","type":"exact"},{"name":"downregulation of cell junction assembly","type":"exact"},{"name":"inhibition of cell junction assembly","type":"narrow"}],"termid":"GO:1901889"}


id: GO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin genes are formed through recombination of the germline genetic elements, also known as immunoglobulin gene segments, within a single locus following the induction of and contributing to an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"},{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"somatic recombination of immunoglobulin genes involved in immune response","synonyms":[{"name":"somatic recombination of antibody genes during immune response","type":"related"},{"name":"somatic recombination of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002204"}


id: FYPO:0007809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, and morphology of cytoplasmic microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cytoplasmic microtubules","synonyms":[{"name":"normal cytoplasmic microtubule morphology","type":"exact"},{"name":"normal cytoplasmic microtubule structure","type":"narrow"}],"termid":"FYPO:0007809"}


id: MONDO:0021116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of genes characteristic of luminal epithelial cells, including estrogen receptor (ER), estrogen regulated protein LIV-1, and the transcription factors hepatocyte nuclear factor 3, HNF3A, XBP1, and GATA 3. This subtype of breast cancer is associated with a good prognosis.","definition_xrefs":["NCIT:C53554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast tumor luminal A or B","termid":"MONDO:0004990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"luminal A breast carcinoma","secondary_identifiers":["UMLS:C3642345","MEDGEN:770985"],"synonyms":[{"name":"Luminal A","type":"exact"},{"name":"Luminal A breast cancer","type":"exact"},{"name":"Luminal A breast carcinoma","type":"exact"},{"name":"Luminal A estrogen receptor positive subtype of breast carcinoma","type":"exact"},{"name":"Luminal A oestrogen receptor positive subtype of breast carcinoma","type":"exact"},{"name":"Luminal A subtype of breast carcinoma","type":"exact"}],"termid":"MONDO:0021116","xrefs":{"Monarch":{"xref_id":"0021116"}}}


id: PR:000050546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr2 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PMID:27227887","PPRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe)","termid":"PR:000050544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr2/GTP+","pombase_gene_id":"SPCC777.05","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr2, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr2/GTP+","type":"exact"},{"name":"gtr2/GTP+","type":"exact"},{"name":"Gtr2/GTP+","type":"exact"}],"termid":"PR:000050546"}


id: MONDO:0006534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of physical urticarias (or hives) that appears when a person is sweating.","definition_xrefs":["EFO:1000679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical urticaria","termid":"MONDO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholinergic urticaria","secondary_identifiers":["MEDGEN:508939","ICD10CM:L50.5","ICD9:708.5","DOID:14443","UMLS:C0152230","icd11.foundation:855107748","Wikipedia:Cholinergic_urticaria","SCTID:73098005"],"termid":"MONDO:0006534","xrefs":{"Monarch":{"xref_id":"0006534"}}}


id: MONDO:0016406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other metabolic disease with epilepsy (obsolete MONDO:0016406)","secondary_identifiers":["Orphanet:225713"],"termid":"MONDO:0016406","xrefs":{"Monarch":{"xref_id":"0016406"}}}


id: PBO:0064221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 3","termid":"PBO:0064221"}


id: MONDO:0004129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anal carcinoma arising from the transitional zone of the anal canal.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"anal squamous cell carcinoma","termid":"MONDO:0006082"},{"relation_name":"is_a","term_name":"anal canal carcinoma","termid":"MONDO:0007108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"cloacogenic carcinoma","secondary_identifiers":["NCIT:C8255","UMLS:C0334273","ICDO:8124/3","DOID:7173","icd11.foundation:1771267581","MEDGEN:90755","MESH:C563020"],"synonyms":[{"name":"anal canal cloacogenic cancer","type":"exact"},{"name":"anal canal cloacogenic carcinoma","type":"exact"},{"name":"anal cloacogenic carcinoma","type":"exact"},{"name":"cloacogenic anal carcinoma","type":"exact"},{"name":"cloacogenic carcinoma","type":"exact"},{"name":"cloacogenic carcinoma (morphologic abnormality)","type":"exact"},{"name":"cloacogenic carcinoma of anus","type":"exact"},{"name":"cloacogenic carcinoma of the anus","type":"exact"}],"termid":"MONDO:0004129","xrefs":{"Monarch":{"xref_id":"0004129"}}}


id: PBO:0059162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin phosphatase Rho interacting protein pseudogene 1","termid":"PBO:0059162"}


id: PBO:0004622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp4 (predicted)","termid":"PBO:0004622"}


id: PBO:0034094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_levels_of","termid":"PBO:0034094"}


id: PR:O42900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk19 gene.","definition_xrefs":["UniProtKB:O42900","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.07","synonyms":[{"name":"Spom972h-ppk19","type":"exact"}],"termid":"PR:O42900"}


id: PBO:0079978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 16","termid":"PBO:0079978"}


id: GO:0035461
data:
  {"annotated_genes":["SJAG_04673","SJAG_03503","SJAG_02779","SJAG_02780","SJAG_02962","SJAG_03652","SJAG_00835","SJAG_05175","SJAG_03808","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91260,71171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[73190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904947"},{"annotations":[102815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[107440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[116599,89345,117873,89346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[89348,116600,117874,89347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[117875,89349,89350,116601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[99863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[89351,89352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The process in which a vitamin is transported across a membrane. A vitamin is one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02152":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_03808":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vitamin transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vitamin membrane transport","type":"exact"}],"termid":"GO:0035461","terms_by_termid":{"GO:0071934":null,"GO:0098717":null,"GO:0140125":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1904947":null,"GO:1905135":null,"GO:1990545":null}}


id: PR:Q09845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpd2 gene.","definition_xrefs":["UniProtKB:Q09845","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase [NAD(+)] 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.04c","synonyms":[{"name":"Spom972h-gpd2","type":"exact"}],"termid":"PR:Q09845"}


id: GO:2000051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of non-canonical Wnt signaling pathway.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway","termid":"GO:0030178"},{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"negatively_regulates","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of non-canonical Wnt signaling pathway","synonyms":[{"name":"negative regulation of beta-catenin-independent Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of non-canonical Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of non-canonical Wnt receptor signalling pathway","type":"exact"},{"name":"negative regulation of non-canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:2000051"}


id: MONDO:0009739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infantile neuroaxonal dystrophy (obsolete MONDO:0009739)","secondary_identifiers":["NANDO:2200887"],"termid":"MONDO:0009739","xrefs":{"Monarch":{"xref_id":"0009739"}}}


id: PBO:0005832
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.13","termid":"PBO:0005832"}


id: PBO:0076074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20-related kinase adaptor beta pseudogene 1","termid":"PBO:0076074"}


id: MONDO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anencephaly","termid":"MONDO:0000819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"anencephaly 2","secondary_identifiers":["UMLS:C5561945","MEDGEN:1794155","OMIM:619452"],"synonyms":[{"name":"ANPH2","type":"exact"},{"name":"anencephaly 2","type":"exact"}],"termid":"MONDO:0030338","xrefs":{"Monarch":{"xref_id":"0030338"}}}


id: MONDO:0006231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic, hamartomatous polyp that arises from the stomach, small intestine, and large intestine. This group includes the juvenile polyps and Peutz-Jeghers polyps.","definition_xrefs":["NCIT:C96475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"},{"relation_name":"is_a","term_name":"gastrointestinal polyp","termid":"MONDO:0024292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastrointestinal hamartoma","secondary_identifiers":["UMLS:C3272802","EFO:1000280","MEDGEN:474435"],"synonyms":[{"name":"gastrointestinal hamartoma","type":"exact"}],"termid":"MONDO:0006231","xrefs":{"Monarch":{"xref_id":"0006231"}}}


id: PBO:0059545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Leu (CUN) 2","termid":"PBO:0059545"}


id: GO:0090599
data:
  {"annotated_genes":["SJAG_04363","SJAG_02131","SJAG_02076","SJAG_03444","SJAG_03824","SJAG_02718","SJAG_04301","SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86839,86840,95306,95307],"is_not":false,"summary":null,"term":"GO:0090599"},{"annotations":[100784,100785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004558"},{"annotations":[86595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106407"},{"annotations":[98980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004573"},{"annotations":[102480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004339"},{"annotations":[110460,88303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051118"},{"annotations":[115259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004575"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-linked alpha-D-glucose residue with release of alpha-D-glucose.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":8,"genes_by_uniquename":{"SJAG_02076":null,"SJAG_02131":null,"SJAG_02718":null,"SJAG_03280":null,"SJAG_03444":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"alpha-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9036729","Reactome:R-HSA-9036727"],"termid":"GO:0090599","terms_by_termid":{"GO:0004339":null,"GO:0004558":null,"GO:0004573":null,"GO:0004575":null,"GO:0051118":null,"GO:0090599":null,"GO:0106407":null}}


id: PBO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prevacuole/endosomal FYVE tethering component Pep7 (predicted)","termid":"PBO:0002134"}


id: PBO:0065663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type M","termid":"PBO:0065663"}


id: MONDO:1011334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mouth mucosa disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouth mucosa disorder, non-human animal","termid":"MONDO:1011334","xrefs":{"Monarch":{"xref_id":"1011334"}}}


id: PBO:0040182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly factor for spindle microtubules","termid":"PBO:0040182"}


id: GO:0003783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete barbed-end actin capping activity (obsolete GO:0003783)","synonyms":[{"name":"barbed-end actin capping activity","type":"exact"}],"termid":"GO:0003783"}


id: FYPO:0005625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to ultraviolet light during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:26652183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability following cellular response to UV","termid":"FYPO:0004662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal viability following cellular response to UV during mitotic S phase","synonyms":[{"name":"normal cell population viability following cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal viability following UV exposure during mitotic S phase","type":"exact"},{"name":"normal viability following cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal viability following cellular response to ultraviolet light during mitotic S phase","type":"exact"}],"termid":"FYPO:0005625"}


id: GO:0023011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of the initiation of T cell receptor signaling.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of initiation of T cell receptor signaling (obsolete GO:0023011)","synonyms":[{"name":"positive regulation of initiation of T cell receptor signaling","type":"exact"},{"name":"positive regulation of initiation of T cell receptor signalling","type":"exact"}],"termid":"GO:0023011"}


id: PBO:0056012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056012"}


id: GO:1905467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G-quadruplex DNA unwinding.","definition_xrefs":["PMID:26503245","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G-quadruplex DNA unwinding","termid":"GO:1905465"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"G-quadruplex DNA unwinding","termid":"GO:0044806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of G-quadruplex DNA unwinding","synonyms":[{"name":"activation of G-quadruplex DNA unwinding","type":"narrow"},{"name":"up regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"up-regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"upregulation of G-quadruplex DNA unwinding","type":"exact"}],"termid":"GO:1905467"}


id: PBO:0031618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transposition","termid":"PBO:0031618"}


id: PBO:0084016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoprotein involved in cell wall beta-glucan assembly; null mutation leads to severe growth defects, aberrant multibudded morphology, and mating defects","termid":"PBO:0084016"}


id: PBO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 34","termid":"PBO:0071896"}


id: PBO:0071310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 33","termid":"PBO:0071310"}


id: PBO:0064927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 regulatory subunit 1","termid":"PBO:0064927"}


id: PBO:0061055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipsnap homolog 3A","termid":"PBO:0061055"}


id: FYPO:0002259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-leucine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal leucine import","synonyms":[{"name":"normal L-leucine import","type":"narrow"},{"name":"normal L-leucine import across plasma membrane","type":"exact"},{"name":"normal leucine import during mitotic cell cycle","type":"related"},{"name":"normal leucine import during vegetative growth","type":"exact"},{"name":"normal leucine import into cell","type":"exact"},{"name":"normal leucine uptake","type":"exact"}],"termid":"FYPO:0002259"}


id: PBO:0041198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD13 homolog pseudogene 1","termid":"PBO:0041198"}


id: GO:0045205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAP kinase into, out of or within a cell, or between cells.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK transporter activity (obsolete GO:0045205)","synonyms":[{"name":"MAPK transporter activity","type":"exact"}],"termid":"GO:0045205"}


id: GO:1904096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of protein tyrosine phosphatase activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:22389722","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein tyrosine phosphatase complex","termid":"GO:1904096"}


id: GO:0021785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone is directed to a specific target site. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls","GOC:dph","PMID:14699587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron axon guidance","termid":"GO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomotor neuron axon guidance","synonyms":[{"name":"BMN axon guidance","type":"exact"},{"name":"branchial motor axon guidance","type":"exact"},{"name":"special visceral motor neuron axon guidance","type":"exact"}],"termid":"GO:0021785"}


id: GO:0060644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"mammary gland epithelium development","termid":"GO:0061180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"}


id: MONDO:0026727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shukla-Vernon syndrome","secondary_identifiers":["UMLS:C5193146","GARD:18511","OMIM:301029","DOID:0111841","MEDGEN:1674076"],"synonyms":[{"name":"SHUKLA-VERNON SYNDROME","type":"related"},{"name":"SHUVER","type":"related"},{"name":"Shukla-Vernon syndrome, X-linked recessive","type":"exact"}],"termid":"MONDO:0026727","xrefs":{"Monarch":{"xref_id":"0026727"}}}


id: PBO:0041418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C8 beta chain","termid":"PBO:0041418"}


id: SO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding valyl tRNA (SO:000273).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valine_tRNA_primary_transcript","synonyms":[{"name":"valine tRNA primary transcript","type":"exact"}],"termid":"SO:0000230"}


id: PBO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA(Gln) amidotransferase complex subunit Gtf1 (predicted)","termid":"PBO:0017087"}


id: MONDO:0006456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from the epithelial cells of the thymus. Although thymomas are usually encapsulated tumors, they may invade the capsule and infiltrate the surrounding tissues or even metastasize to distant anatomic sites. The following morphologic subtypes are currently recognized: type A, type B, type AB, metaplastic, micronodular, microscopic, and sclerosing thymoma. Thymomas type B are further subdivided into types B1, B2, and B3. Thymoma type B3 usually has the most aggressive clinical course.","definition_xrefs":["NCIT:C3411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymic epithelial neoplasm","termid":"MONDO:0018079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymoma","secondary_identifiers":["ICDO:8580/1","SCTID:444231005","UMLS:C0040100","ICD9:239.89","MEDGEN:52743","Orphanet:99867","DOID:3275","ICD10CM:D15.0","ONCOTREE:THYM","MedDRA:10043670","EFO:1000581","HP:0100522","GARD:16922","icd11.foundation:33869057","MESH:D013945"],"synonyms":[{"name":"THYM","type":"related"},{"name":"primary thymic epithelial neoplasm","type":"exact"},{"name":"primary thymic epithelial tumor","type":"exact"},{"name":"primary thymic epithelial tumour","type":"exact"},{"name":"thymoma","type":"exact"},{"name":"thymoma (disease)","type":"exact"}],"termid":"MONDO:0006456","xrefs":{"Monarch":{"xref_id":"0006456"}}}


id: GO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoethanolamine = acetaldehyde + NH4 + phosphate.","definition_xrefs":["EC:4.2.3.2","RHEA:17889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ethanolamine-phosphate phospho-lyase activity","secondary_identifiers":["KEGG_REACTION:R00748","Reactome:R-HSA-5696415","MetaCyc:ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN"],"synonyms":[{"name":"O-phosphoethanolamine-phospholyase activity","type":"related"},{"name":"O-phosphorylethanol-amine phospho-lyase activity","type":"related"},{"name":"amino alcohol O-phosphate phospholyase activity","type":"broad"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating)","type":"related"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating; acetaldehyde-forming)","type":"related"}],"termid":"GO:0050459"}


id: PBO:0062725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily A member 4 pseudogene","termid":"PBO:0062725"}


id: PBO:0029401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_protein_localization_to_cell_division_site","termid":"PBO:0029401"}


id: GO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the tricuspid valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve development","termid":"GO:0003171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve development","termid":"GO:0003175"}


id: GO:0002909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"negative regulation of B cell deletion","termid":"GO:0002868"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell deletion","termid":"GO:0002908"},{"relation_name":"negatively_regulates","term_name":"peripheral B cell deletion","termid":"GO:0002454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral B cell deletion","synonyms":[{"name":"down regulation of peripheral B cell deletion","type":"exact"},{"name":"down-regulation of peripheral B cell deletion","type":"exact"},{"name":"downregulation of peripheral B cell deletion","type":"exact"},{"name":"inhibition of peripheral B cell deletion","type":"narrow"}],"termid":"GO:0002909"}


id: PBO:0084207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeobox transcription factor; regulatory targets include genes involved in phosphate metabolism; binds cooperatively with Pho4p to the PHO5 promoter; phosphorylation of Pho2p facilitates interaction with Pho4p; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084207"}


id: PBO:0086296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in regulating Swe1p-dependent polarized growth; involved in maintenance of Cdc55p in the cytoplasm where it promotes mitotic entry; interacts with silencing proteins at the telomere; implicated in the mitotic exit network through regulation of Cdc14p localization; ZDS2 has a paralog, ZDS1, that arose from the whole genome duplication","termid":"PBO:0086296"}


id: FYPO:0002197
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118517,118512,118523,118549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[118489,118483,118482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is viable, and cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"has_part","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":7,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"viable vegetative cell with abnormal cell shape","references_by_uniquename":{"PMID:29566183":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_04280","SJAG_03581","SJAG_02819","SJAG_01794","SJAG_03453","SJAG_00514"],"single_locus_genotype_uniquenames":["gef1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","scd1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","ras1delta","efc25delta"],"synonyms":[{"name":"viable lumpy cell","type":"related"},{"name":"viable vegetative cell with abnormal cell shape during mitotic cell cycle","type":"related"},{"name":"viable, abnormal cell shape during vegetative growth","type":"exact"}],"termid":"FYPO:0002197","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0062376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 19 pseudogene","termid":"PBO:0062376"}


id: GO:0046555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the deacetylation of xylans and xylo-oligosaccharides.","definition_xrefs":["EC:3.1.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"acetylxylan esterase activity","secondary_identifiers":["MetaCyc:3.1.1.72-RXN"],"termid":"GO:0046555"}


id: PR:O74517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf1 gene.","definition_xrefs":["UniProtKB:O74517","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein saf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.11","synonyms":[{"name":"Spom972h-saf1","type":"exact"}],"termid":"PR:O74517"}


id: PATO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's amount of osmoles of solute per kilogram of solvent.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Osmolarity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osmolality","termid":"PATO:0002027"}


id: PBO:0111057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase superfamily, implicated in transcription , RNA processing, or RNA export","termid":"PBO:0111057"}


id: PBO:0059902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 25","termid":"PBO:0059902"}


id: PBO:0071668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 9","termid":"PBO:0071668"}


id: PBO:0089828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC1 DNA repair endonuclease non-catalytic subunit Swi10","termid":"PBO:0089828"}


id: PBO:0065614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A2","termid":"PBO:0065614"}


id: PBO:0065007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 11","termid":"PBO:0065007"}


id: MONDO:0043892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection related to a device used to replace a missing body part. The infection may occur during the operation from direct contamination or post-operatively through hematogenous spread.","definition_xrefs":["NCIT:C79705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prosthesis-related infectious disease","secondary_identifiers":["MESH:D016459"],"synonyms":[{"name":"device related infection","type":"exact"},{"name":"infections, prosthesis-related","type":"related"},{"name":"prosthesis related infections","type":"related"},{"name":"prosthesis-related infection","type":"exact"}],"termid":"MONDO:0043892","xrefs":{"Monarch":{"xref_id":"0043892"}}}


id: PBO:0077074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIA1 cytotoxic granule associated RNA binding protein like 1","termid":"PBO:0077074"}


id: PBO:0017833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C Pgc1 (predicted)","termid":"PBO:0017833"}


id: GO:0061446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in endocardial cushion cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate determination","termid":"GO:0060913"},{"relation_name":"part_of","term_name":"endocardial cushion cell fate commitment","termid":"GO:0061445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion cell fate determination","termid":"GO:0061446"}


id: PBO:0078596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 9, Y-linked","termid":"PBO:0078596"}


id: PBO:0062575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 4 pseudogene","termid":"PBO:0062575"}


id: PBO:0049362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 21","termid":"PBO:0049362"}


id: MONDO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to recognize musical notes, rhythms, and intervals.","definition_xrefs":["DOID:0060132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amusia","secondary_identifiers":["UMLS:C0234497","MEDGEN:536039","icd11.foundation:777548616"],"synonyms":[{"name":"receptive amusia","type":"exact"}],"termid":"MONDO:0000662","xrefs":{"Monarch":{"xref_id":"0000662"}}}


id: PBO:0028643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028643"}


id: MONDO:0021340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial dermatitis occurring on skin surfaces in contact with each other, such as the axillae, neck creases, intergluteal fold, between the toes, etc. Obesity is a predisposing factor. The condition is caused by moisture and friction and is characterized by erythema, maceration, burning, and exudation.","definition_xrefs":["MESH:D007402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"intertrigo","secondary_identifiers":["MEDGEN:43928","SCTID:58759008","UMLS:C0021807","ICD9:695.89"],"synonyms":[{"name":"Eczema intertrigo","type":"related"},{"name":"Erythema intertrigo","type":"related"},{"name":"Intertrigo","type":"related"}],"termid":"MONDO:0021340","xrefs":{"Monarch":{"xref_id":"0021340"}}}


id: GO:0030158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate.","definition_xrefs":["EC:2.4.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016757","GO:0140096","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein xylosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.2.26-RXN","RHEA:50192","Reactome:R-HSA-1878002"],"synonyms":[{"name":"UDP-D-xylose:core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:core protein xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-xylose-core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"peptide O-xylosyltransferase activity","type":"exact"},{"name":"uridine diphosphoxylose-core protein beta-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-protein xylosyltransferase activity","type":"related"}],"termid":"GO:0030158"}


id: PBO:0079846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-45 myosin chaperone A","termid":"PBO:0079846"}


id: PBO:0049827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDGF like 2","termid":"PBO:0049827"}


id: PATO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"position","secondary_identifiers":["PATO:0001032","PATO:0001631"],"synonyms":[{"name":"location","type":"exact"},{"name":"placement","type":"exact"},{"name":"relational spatial quality","type":"exact"}],"termid":"PATO:0000140"}


id: MONDO:0016730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, slow growing neuroepithelial neoplasm composed of neoplastic, mature ganglion cells.","definition_xrefs":["NCIT:C6934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gangliocytoma","secondary_identifiers":["NANDO:2200097","SCTID:116371000119107","ICDO:9492/0","MESH:D005729","Orphanet:251937","GARD:10638","DOID:2426","MEDGEN:1681593","ONCOTREE:GNC","UMLS:C5190517"],"synonyms":[{"name":"GNC","type":"related"}],"termid":"MONDO:0016730","xrefs":{"Monarch":{"xref_id":"0016730"}}}


id: PBO:0049258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-secretase activating protein","termid":"PBO:0049258"}


id: GO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH2 group of donors, with a quinone or similar compound as acceptor (obsolete GO:0052585)","termid":"GO:0052585"}


id: GO:0060358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of L-leucine import. L-leucine import is the directed movement of leucine into a cell or organelle.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of L-leucine import (obsolete GO:0060358)","synonyms":[{"name":"negative regulation of leucine import","type":"broad"}],"termid":"GO:0060358"}


id: GO:0035393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 9 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"CXCL9 production","type":"exact"},{"name":"MIG production","type":"exact"},{"name":"Monokine induced by gamma interferon production","type":"exact"}],"termid":"GO:0035393"}


id: PBO:0091820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YDR293C","termid":"PBO:0091820"}


id: PBO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GAR1","termid":"PBO:0017040"}


id: PBO:0054491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1891","termid":"PBO:0054491"}


id: PBO:0011111
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion library version 2. has incorrect strain","termid":"PBO:0011111"}


id: PBO:0085781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the mitochondrial outer surface; links the Arp2/3 complex with the mitochondria during anterograde mitochondrial movement; also binds to and promotes degradation of mRNAs for select nuclear-encoded mitochondrial proteins; translationally represses oxidative stress-linked genes; regulates CoQ biosynthesis","termid":"PBO:0085781"}


id: MONDO:1011191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial chondromatosis that occurs in great horned owl.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"synovial chondromatosis, non-human animal","termid":"MONDO:1010304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial chondromatosis, great horned owl","secondary_identifiers":["OMIA:001174-56268"],"termid":"MONDO:1011191","xrefs":{"Monarch":{"xref_id":"1011191"}}}


id: MONDO:0009803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital osteogenesis imperfecta-microcephaly-cataracts syndrome is characterized by multiple fractures in the prenatal period, microcephaly and bilateral cataracts. It has been described in three infants all of whom died in utero or a few hours after birth. The mode of inheritance appears to be autosomal recessive.","definition_xrefs":["Orphanet:2772"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital osteogenesis imperfecta-microcephaly-cataracts syndrome","secondary_identifiers":["ICD10CM:Q78.0","GARD:4139","OMIM:259410","MEDGEN:337988","MESH:C537558","UMLS:C1850184"],"synonyms":[{"name":"osteogenesis imperfecta congenita, microcephaly, and cataracts","type":"related"}],"termid":"MONDO:0009803","xrefs":{"Monarch":{"xref_id":"0009803"}}}


id: PBO:0088424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor beta subunit Srp102","termid":"PBO:0088424"}


id: GO:0004652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group.","definition_xrefs":["EC:2.7.7.19"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide adenylyltransferase activity (obsolete GO:0004652)","synonyms":[{"name":"AMP polynucleotidylexotransferase activity","type":"related"},{"name":"ATP-polynucleotide adenylyltransferase activity","type":"related"},{"name":"ATP:polynucleotide adenylyltransferase activity","type":"related"},{"name":"ATP:polynucleotidylexotransferase activity","type":"related"},{"name":"NTP polymerase activity","type":"related"},{"name":"RNA adenylating enzyme activity","type":"related"},{"name":"RNA formation factors, PF1","type":"related"},{"name":"adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"related"},{"name":"poly(A) hydrolase activity","type":"related"},{"name":"poly(A) polymerase activity","type":"related"},{"name":"poly(A) synthetase activity","type":"related"},{"name":"poly-A polymerase activity","type":"related"},{"name":"polyadenylate nucleotidyltransferase activity","type":"related"},{"name":"polyadenylate polymerase activity","type":"related"},{"name":"polyadenylate synthetase activity","type":"related"},{"name":"polyadenylic acid polymerase activity","type":"related"},{"name":"polyadenylic polymerase activity","type":"related"},{"name":"terminal riboadenylate transferase activity","type":"related"}],"termid":"GO:0004652"}


id: GO:0032705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-21 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-21 production","termid":"GO:0032665"},{"relation_name":"negatively_regulates","term_name":"interleukin-21 production","termid":"GO:0032625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-21 production","secondary_identifiers":["GO:0045391"],"synonyms":[{"name":"down regulation of interleukin-21 production","type":"exact"},{"name":"down-regulation of interleukin-21 production","type":"exact"},{"name":"downregulation of interleukin-21 production","type":"exact"},{"name":"negative regulation of interleukin-21 biosynthetic process","type":"narrow"}],"termid":"GO:0032705"}


id: MONDO:0019332
data:
  {"annotated_genes":["SJAG_05011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"}]},"cv_name":"mondo","definition":"Punctate palmoplantar keratoderma type I (PPKP1), also known as Buschke-Fischer-Brauer syndrome, is a very rare hereditary skin disease characterized by irregularly distributed epidermal hyperkeratosis of the palms and soles with wide variation among patients..","definition_xrefs":["Orphanet:79501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma","termid":"MONDO:0017675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3103","SCTID:717184007","MEDGEN:372099","UMLS:C1835662"],"synonyms":[{"name":"Brauer-Buschke-Fischer syndrome","type":"related"},{"name":"Buschke-Fischer-Brauer syndrome","type":"exact"},{"name":"PPKP1","type":"exact"},{"name":"keratoderma, palmoplantar punctate type 1","type":"related"},{"name":"keratodermia palmoplantaris papulosa, Buschke-Fischer-Brauer type","type":"exact"},{"name":"punctate palmoplantar keratoderma type I","type":"related"},{"name":"type I punctate palmoplantar keratoderma","type":"related"}],"termid":"MONDO:0019332","terms_by_termid":{"MONDO:0007858":null},"xrefs":{"Monarch":{"xref_id":"0019332"}}}


id: GO:0052646
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93175,105661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alditol phosphates, any phosphorylated polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.","definition_xrefs":["PMID:30240188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alditol phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alditol phosphate metabolism","type":"exact"}],"termid":"GO:0052646","terms_by_termid":{"GO:0046168":null}}


id: PR:000027522
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase spindle elongation protein 1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q9HDY1-1, Ser-640/Ser-683/Ser-688/Ser-693, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:19686686","PMID:18257517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase spindle elongation protein 1","termid":"PR:000027517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ase1/Phos(S640,S683,S688,S693)","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"PomBase_original_PRO_term_name: anaphase spindle elongation protein 1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ase1/Phos:1","type":"exact"},{"name":"ase1/Phos(S640,S683,S688,S693)","type":"exact"}],"termid":"PR:000027522"}


id: MONDO:0007551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS). The disease is characterized by blisters occurring mainly on the palms and soles, exacerbated by warm weather.","definition_xrefs":["Orphanet:79400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 1C, localized","secondary_identifiers":["MEDGEN:87016","DOID:0080510","OMIM:131800","ICD9:757.39","UMLS:C0080333","SCTID:294705005","GARD:2146"],"synonyms":[{"name":"EBS, acral form","type":"related"},{"name":"EBS-loc","type":"exact"},{"name":"Weber-Cockayne syndrome","type":"related"},{"name":"Weber-Cockayne type epidermolysis bullosa simplex","type":"related"},{"name":"epidermolysis bullosa of hands and feet","type":"related"},{"name":"epidermolysis bullosa simplex 1C, localized","type":"exact"},{"name":"epidermolysis bullosa simplex of palms and soles","type":"exact"},{"name":"epidermolysis bullosa simplex, Weber-Cockayne type","type":"exact"},{"name":"epidermolysis bullosa simplex, localised","type":"related"},{"name":"epidermolysis bullosa simplex, localized","type":"related"},{"name":"localised epidermolysis bullosa simplex","type":"exact"},{"name":"localized epidermolysis bullosa simplex","type":"exact"}],"termid":"MONDO:0007551","xrefs":{"Monarch":{"xref_id":"0007551"}}}


id: MONDO:0009132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia-like disorder","secondary_identifiers":["OMIM:224000","MESH:C535728","MEDGEN:347385","UMLS:C1857153"],"synonyms":[{"name":"dysautonomia like disorder","type":"related"},{"name":"dysautonomia-like disorder","type":"exact"}],"termid":"MONDO:0009132","xrefs":{"Monarch":{"xref_id":"0009132"}}}


id: PBO:0066318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with multiple splicing-like pseudogene","termid":"PBO:0066318"}


id: FYPO:0001547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to zinc ion starvation","synonyms":[{"name":"increased RNA accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"increased RNA level during cellular response to zinc ion depletion","type":"exact"},{"name":"increased RNA level during cellular response to zinc ion deprivation","type":"exact"},{"name":"increased RNA level during cellular response to zinc ion limitation","type":"exact"},{"name":"increased RNA level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to zinc starvation","type":"exact"},{"name":"increased mRNA level during cellular response to zinc ion starvation","type":"narrow"},{"name":"increased transcript level during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0001547"}


id: PBO:0113498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane receptor with a role in nucleophagy; involved in selective autophagy of the endoplasmic reticulum and nucleus in response to nitrogen starvation or rapamycin treatment; role in nuclear envelope deformation to generate nucleus-derived double-membrane vesicles (NDVs), interacting with Atg8p to target these NDVs to forming autophagosomal membranes; anchored in the outer nuclear membrane, associating with the inner nuclear membrane via amphipathic helices","termid":"PBO:0113498"}


id: PATO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A monadic quality of continuant inhering in a bearer by virtue of the bearer's being intricate and compounded.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexity","termid":"PATO:0001502"}


id: PBO:0087103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 51 (rp51) of the small (40s) subunit; homologous to mammalian ribosomal protein S17, no bacterial homolog; RPS17B has a paralog, RPS17A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087103"}


id: SO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A terminator signal for RNA polymerase III transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_terminator","termid":"SO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminator_of_type_2_RNApol_III_promoter","synonyms":[{"name":"terminator of type 2 RNApol III promoter","type":"exact"}],"termid":"SO:0000615"}


id: PBO:0033793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_aseptate_vegetative_cell_with_cell_cycle_arrest_in_mitotic_G2_phase","termid":"PBO:0033793"}


id: FYPO:0002517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle checkpoint signaling is abnormal (does not occur, or occurs abnormally). Abnormal arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"},{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"abnormal response to mitotic cell cycle checkpoint signaling","synonyms":[{"name":"abnormal mitotic cell cycle checkpoint arrest","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from checkpoint activation","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from defective checkpoint activation","type":"related"}],"termid":"FYPO:0002517"}


id: GO:1903138
data:
  {"annotated_genes":["SJAG_03263","SJAG_02392","SJAG_05000","SJAG_04522","SJAG_01114","SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95048,98633,102980,106204,106769,117439],"is_not":false,"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cell integrity MAPK cascade.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of stress-activated MAPK cascade","termid":"GO:0032873"},{"relation_name":"is_a","term_name":"regulation of cell integrity MAPK cascade","termid":"GO:1903137"},{"relation_name":"negatively_regulates","term_name":"cell integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cell integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inhibition of Mpk1 cascade","type":"narrow"},{"name":"inhibition of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"inhibition of cell wall biogenesis, MAPKKK cascade","type":"narrow"},{"name":"negative regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"negative regulation of Mpk1 cascade","type":"narrow"},{"name":"negative regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"negative regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"negative regulation of cell integrity MAPK pathway","type":"exact"},{"name":"negative regulation of cell wall integrity MAPK cascade","type":"narrow"}],"termid":"GO:1903138","terms_by_termid":{"GO:1903138":null}}


id: GO:0007453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the clypeo-labral disc are generated and organized. This includes the transformation of a clypeo-labal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the labrum, anterior and posterior cibarial plates, fish trap bristles, epistomal sclerite and clypeus.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeo-labral disc morphogenesis","synonyms":[{"name":"clypeo-labral disc metamorphosis","type":"exact"},{"name":"morphogenesis of structures derived from the clypeo-labral disc","type":"exact"}],"termid":"GO:0007453"}


id: FYPO:0003094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere outer repeat region are present at lower levels than normal.","definition_xrefs":["PomBase:mah","PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased centromeric outer repeat transcript level","synonyms":[{"name":"decreased accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"decreased accumulation of centromeric outer repeat transcripts during vegetative growth","type":"related"},{"name":"decreased accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"decreased centromere outer repeat transcript level","type":"exact"},{"name":"decreased centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"decreased centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"decreased centromeric outer repeat-derived transcript level","type":"exact"},{"name":"decreased level of centromeric outer repeat transcripts","type":"exact"},{"name":"reduced centromeric outer repeat transcript level","type":"exact"}],"termid":"FYPO:0003094"}


id: GO:0035249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of glutamate from a presynapse, across a chemical synapse, the subsequent activation of glutamate receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synaptic transmission, glutamatergic","synonyms":[{"name":"glutamatergic synaptic transmission","type":"exact"}],"termid":"GO:0035249"}


id: MONDO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma (disease) that involves the mucosa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma of the mucosa","secondary_identifiers":["UMLS:C5191057","GARD:20110","MEDGEN:1676191","Orphanet:168999"],"synonyms":[{"name":"melanoma (disease) of mucosa","type":"exact"},{"name":"mucosa melanoma","type":"exact"},{"name":"mucosa melanoma (disease)","type":"exact"}],"termid":"MONDO:0015694","xrefs":{"Monarch":{"xref_id":"0015694"}}}


id: GO:0048472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-threonine + H+ = (R)-1-aminopropan-2-yl phosphate + CO2.","definition_xrefs":["EC:4.1.1.81","RHEA:11492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"threonine-phosphate decarboxylase activity","secondary_identifiers":["MetaCyc:4.1.1.81-RXN","KEGG_REACTION:R06530"],"synonyms":[{"name":"CobD","type":"related"},{"name":"L-threonine O-3-phosphate carboxy-lyase [(R)-1-aminopropan-2-yl-phosphate-forming]","type":"related"},{"name":"L-threonine O-3-phosphate carboxy-lyase activity","type":"related"},{"name":"L-threonine-O-3-phosphate decarboxylase activity","type":"exact"}],"termid":"GO:0048472"}


id: MONDO:0019124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microscopic polyangiitis (MPA) is an inflammatory, necrotizing, systemic vasculitis that affects predominantly small vessels (i.e. small arteries, arterioles, capillaries, venules) in multiple organs.","definition_xrefs":["Orphanet:727"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"anti-neutrophil cytoplasmic antibody-associated vasculitis","termid":"MONDO:0015492"},{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microscopic polyangiitis","secondary_identifiers":["NCIT:C70549","icd11.foundation:999231798","MedDRA:10063344","UMLS:C2347126","GARD:3652","NANDO:2200426","MEDGEN:389393","ICD10CM:M31.7","MESH:D055953","SCTID:239928004","EFO:1000784","NANDO:1200262"],"synonyms":[{"name":"MPA","type":"exact"},{"name":"Micropolyangiitis","type":"exact"},{"name":"microscopic polyarteritis","type":"exact"}],"termid":"MONDO:0019124","xrefs":{"Monarch":{"xref_id":"0019124"}}}


id: GO:0003188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a heart valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"heart valve morphogenesis","termid":"GO:0003179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve formation","termid":"GO:0003188"}


id: MONDO:0016185
data:
  {"annotated_genes":["SJAG_04053","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85892,85891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002320","MONDO:0024322"],"is_obsolete":false,"name":"qualitative or quantitative defects of protein O-mannosyltransferase 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20424","MEDGEN:1842845","Orphanet:209033","UMLS:C5680852"],"synonyms":[{"name":"qualitative or quantitative defects of protein O-mannosyltransferase type 2","type":"exact"}],"termid":"MONDO:0016185","terms_by_termid":{"MONDO:0013162":null},"xrefs":{"Monarch":{"xref_id":"0016185"}}}


id: PBO:0089302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, citrate","termid":"PBO:0089302"}


id: MONDO:0015261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudo-pelade of Brocq is a rare hair abnormality characterized by onset in adulthood of soft, irregular, flesh-toned patches of alopecia primarily in the parietal and vertex portions of the scalp, without follicular hyperkeratosis or perifollicular inflammation.","definition_xrefs":["Orphanet:129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudopelade of Brocq","secondary_identifiers":["SCTID:238731001","ICD9:704.09","UMLS:C0086873","MESH:C531609","GARD:4536","MEDGEN:88640"],"synonyms":[{"name":"Brocq pseudopelade","type":"related"},{"name":"pseudo pelade of Brocq","type":"related"},{"name":"pseudo-pelade of Brocq","type":"related"}],"termid":"MONDO:0015261","xrefs":{"Monarch":{"xref_id":"0015261"}}}


id: GO:0033260
data:
  {"annotated_genes":["SJAG_03525","SJAG_03438","SJAG_02690","SJAG_04879","SJAG_01762","SJAG_02822","SJAG_01374","SJAG_00728","SJAG_01823","SJAG_02992","SJAG_04150","SJAG_02607","SJAG_01210","SJAG_00814","SJAG_02162","SJAG_01884","SJAG_04816","SJAG_00729","SJAG_02439","SJAG_04341","SJAG_00884","SJAG_03048","SJAG_04190","SJAG_01832","SJAG_01076","SJAG_02172","SJAG_04671","SJAG_04272","SJAG_00247","SJAG_00618","SJAG_02294","SJAG_02079","SJAG_00874","SJAG_05197","SJAG_02198","SJAG_02039","SJAG_03780","SJAG_01068","SJAG_00399","SJAG_02074","SJAG_04210","SJAG_03451","SJAG_04877","SJAG_03843","SJAG_00364","SJAG_01354","SJAG_02667","SJAG_00696","SJAG_02348","SJAG_00198","SJAG_05232","SJAG_03160","SJAG_00272","SJAG_05239","SJAG_04995","SJAG_02818","SJAG_03720","SJAG_03855","SJAG_03695","SJAG_02199","SJAG_02182","SJAG_00400","SJAG_02908","SJAG_00863","SJAG_05180","SJAG_00573","SJAG_00857","SJAG_01221","SJAG_04183","SJAG_01010","SJAG_03495","SJAG_00327","SJAG_01410","SJAG_03927","SJAG_01677","SJAG_03898","SJAG_03722","SJAG_06022","SJAG_00536"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88795,94433,96626,97313,98477,103504,103600,106510,106994,110694,111043,111962,114413,115390],"is_not":false,"summary":null,"term":"GO:0033260"},{"annotations":[109095,114539,106505,112696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[108259,103399,109098,112698,111651,112288,106141,114541,104093,88782,93158,94429,94463,111411,106507,102006],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902983"},{"annotations":[102496],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[105586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902969"},{"annotations":[91160,110529,96624,114241,105587,98552,114412,93749,98615,106406,106508,109702,116467,92188,109370,114543,112289],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[102008,104095,94431,103403,117309,108261],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903459"},{"annotations":[93160,106509,94432,94464,103404,104096,88783,106142],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[110901,108276],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990505"},{"annotations":[89653,98616,109703],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[109704,114154,102498],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[90157,94024,95372,98258,111653,88375,95209,97445,115937,106913,94266,106889,108233,98144,108708],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990426"},{"annotations":[115983,108041],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[101552,108042,96965],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[102134,96625],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902315"},{"annotations":[100687,103329,99832,99796,91762,91851,94253],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[102499,116406,111178],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[105779,115369,101558,88269],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[101562],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[106407,109371,114414,91161,105588,114242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006279"},{"annotations":[87515,103330,102126,111654],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"The DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA 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id: PBO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.67","termid":"PBO:0001120"}


id: PR:P17476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp101 gene.","definition_xrefs":["UniProtKB:P17476","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P1-alpha 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.15","synonyms":[{"name":"A1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp101","type":"exact"}],"termid":"PR:P17476"}


id: FYPO:0004128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cysteine-type peptidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal cysteine-type peptidase activity","synonyms":[{"name":"abnormal caspase activity","type":"narrow"},{"name":"abnormal cysteine protease activity","type":"exact"}],"termid":"FYPO:0004128"}


id: PBO:0084357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lectin-like protein with similarity to Flo1p; thought to be expressed and involved in flocculation","termid":"PBO:0084357"}


id: GO:1901779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentalenolactone.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:17178094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"pentalenolactone metabolic process","termid":"GO:1901778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"pentalenolactone catabolic process","synonyms":[{"name":"pentalenolactone breakdown","type":"exact"},{"name":"pentalenolactone catabolism","type":"exact"},{"name":"pentalenolactone degradation","type":"exact"}],"termid":"GO:1901779"}


id: PBO:0049073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 89B","termid":"PBO:0049073"}


id: GO:0045965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid metabolic process","termid":"GO:0007553"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of ecdysteroid metabolic process","synonyms":[{"name":"down regulation of ecdysteroid metabolic process","type":"exact"},{"name":"down-regulation of ecdysteroid metabolic process","type":"exact"},{"name":"downregulation of ecdysteroid metabolic process","type":"exact"},{"name":"inhibition of ecdysteroid metabolic process","type":"narrow"},{"name":"negative regulation of ecdysteroid metabolism","type":"exact"}],"termid":"GO:0045965"}


id: FYPO:0005562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are shorter than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PomBase:mah","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short microtubule bundle","termid":"FYPO:0005797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"short stable microtubule bundle","synonyms":[{"name":"decreased stable microtubule bundle length","type":"exact"},{"name":"short Q-MT bundles","type":"exact"},{"name":"short quiescent cell MT bundle","type":"exact"},{"name":"short quiescent cell microtubule bundle","type":"exact"},{"name":"short stable microtubule array","type":"related"},{"name":"short static microtubule bundle","type":"exact"}],"termid":"FYPO:0005562"}


id: PBO:0090694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase inhibitor Inh1","termid":"PBO:0090694"}


id: GO:1900496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006790","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"activation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"activation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"positive regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"}],"termid":"GO:1900496"}


id: MONDO:0017748
data:
  {"annotated_genes":["SJAG_04881","SJAG_04165","SJAG_03115","SJAG_01416","SJAG_00846","SJAG_03506","SJAG_04975","SJAG_00068","SJAG_06383","SJAG_00295","SJAG_02523"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010221"},{"annotations":[84436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012465"},{"annotations":[85550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009398"},{"annotations":[85389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013882"},{"annotations":[85815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014318"},{"annotations":[86093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014457"},{"annotations":[84996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014780"},{"annotations":[84831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014832"},{"annotations":[85191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013563"},{"annotations":[86120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010466"},{"annotations":[85186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014165"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00846":null,"SJAG_01416":null,"SJAG_02523":null,"SJAG_03115":null,"SJAG_03506":null,"SJAG_04165":null,"SJAG_04881":null,"SJAG_04975":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309515","MEDGEN:1842274","UMLS:C5679954","GARD:21342"],"synonyms":[{"name":"disorder of glycosphingolipid and GPI-anchored proteins glycosylation","type":"exact"},{"name":"disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","type":"related"}],"termid":"MONDO:0017748","terms_by_termid":{"MONDO:0009398":null,"MONDO:0010221":null,"MONDO:0010466":null,"MONDO:0012465":null,"MONDO:0013563":null,"MONDO:0013882":null,"MONDO:0014165":null,"MONDO:0014318":null,"MONDO:0014457":null,"MONDO:0014780":null,"MONDO:0014832":null},"xrefs":{"Monarch":{"xref_id":"0017748"}}}


id: FYPO:0005721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is curved (i.e. follows a smooth bend rather than a straight line) during anaphase B.","definition_xrefs":["PomBase:mah","PMID:15147872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0000120","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"curved mitotic spindle during anaphase B","synonyms":[{"name":"curved bipolar mitotic spindle during anaphase B","type":"exact"},{"name":"curved mitotic spindle during anaphase B during vegetative growth","type":"exact"},{"name":"curved mitotic spindles during anaphase B","type":"exact"},{"name":"curved spindle during anaphase B of mitosis","type":"exact"},{"name":"curved spindle during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0005721"}


id: PR:O74481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi5 gene.","definition_xrefs":["UniProtKB:O74481","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.08c","synonyms":[{"name":"Spom972h-pdi5","type":"exact"}],"termid":"PR:O74481"}


id: PBO:0051839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 1","termid":"PBO:0051839"}


id: PBO:0060009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 29","termid":"PBO:0060009"}


id: PATO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A growth quality of occurrent in which the growth of an organism, structure or group of organisms does not occur.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth quality of occurrent","termid":"PATO:0001433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aplastic growth","synonyms":[{"name":"agenesis","type":"narrow"},{"name":"dysgenesis","type":"narrow"}],"termid":"PATO:0002019"}


id: GO:0061437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of vasculature of the renal system over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10","PMID:11891195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature development","termid":"GO:0061437"}


id: PBO:0046950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A4","termid":"PBO:0046950"}


id: MONDO:0015937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare inflammatory eye disease (obsolete MONDO:0015937)","secondary_identifiers":["Orphanet:182214"],"termid":"MONDO:0015937","xrefs":{"Monarch":{"xref_id":"0015937"}}}


id: PATO:0000992
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of a liquid inhering in a bearer by virtue of the bearer's disposition to internal resistance to flow.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a liquid","termid":"PATO:0001548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viscosity","termid":"PATO:0000992"}


id: PBO:0034301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tributary_of","termid":"PBO:0034301"}


id: MONDO:0019340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleroderma is a rare autoimmune connective tissue disorder characterized by abnormal hardening of the skin and, sometimes, other organs. It is classified into two main forms: localized scleroderma and systemic sclerosis (SSc), the latter comprising three subsets; diffuse cutaneous SSc (dcSSc), limited cutaneous SSc (lcSSc) and limited SSc (lSSc).","definition_xrefs":["Orphanet:801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"scleroderma","secondary_identifiers":["UMLS:C0011644","HP:0100324","EFO:1001993","GARD:18705","MEDGEN:3770","MedDRA:10039710","DOID:419","NCIT:C26746"],"synonyms":[{"name":"dermatosclerosis","type":"exact"},{"name":"scleroderma","type":"exact"},{"name":"scleroderma (disease)","type":"exact"}],"termid":"MONDO:0019340","xrefs":{"Monarch":{"xref_id":"0019340"}}}


id: PBO:0090126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator","termid":"PBO:0090126"}


id: GO:0018610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dibenzofuran + NADH + H+ + O2 = 2,2',3-trihydroxybiphenyl + NAD+.","definition_xrefs":["MetaCyc:R606-RXN","RHEA:42460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dibenzofuran 4,4a-dioxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:r0026"],"termid":"GO:0018610"}


id: PBO:0076952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 2","termid":"PBO:0076952"}


id: MONDO:0851105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrovascular benign neoplasm","secondary_identifiers":["DOID:60007"],"termid":"MONDO:0851105","xrefs":{"Monarch":{"xref_id":"0851105"}}}


id: MONDO:0008393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Rubinstein-Taybi syndrome in which the cause of the disease is a mutation in the CREBBP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rubinstein-Taybi syndrome","termid":"MONDO:0019188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497","MONDO:0002320"],"is_obsolete":false,"name":"Rubinstein-Taybi syndrome due to CREBBP mutations","secondary_identifiers":["Orphanet:353277","UMLS:C4551859","GARD:17534","MEDGEN:1639327","NCIT:C153290","OMIM:180849"],"synonyms":[{"name":"CREBBP Rubinstein-Taybi syndrome","type":"exact"},{"name":"RSTS","type":"related"},{"name":"RSTS1","type":"exact"},{"name":"Rubinstein syndrome","type":"related"},{"name":"Rubinstein-Taybi syndrome 1","type":"exact"},{"name":"Rubinstein-Taybi syndrome caused by mutation in CREBBP","type":"exact"},{"name":"Rubinstein-Taybi syndrome due to CREBBP mutations","type":"exact"},{"name":"Rubinstein-Taybi syndrome type 1","type":"exact"},{"name":"broad thumb-hallux syndrome","type":"related"},{"name":"broad thumbs and great toes, characteristic facies, and intellectual disability","type":"related"},{"name":"broad thumbs and great toes, characteristic facies, and mental retardation","type":"related"}],"termid":"MONDO:0008393","xrefs":{"Monarch":{"xref_id":"0008393"}}}


id: SO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the chromosome between the centromere and the telomere. Human chromosomes have two arms, the p arm (short) and the q arm (long) which are separated from each other by the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_arm","synonyms":[{"name":"chromosome arm","type":"exact"}],"termid":"SO:0000105"}


id: GO:0047156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + acetoin = 1-deoxy-D-altro-heptulose 7-phosphate + acetaldehyde.","definition_xrefs":["RHEA:21504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016744"],"is_obsolete":false,"name":"acetoin-ribose-5-phosphate transaldolase activity","secondary_identifiers":["EC:2.2.1.4","KEGG_REACTION:R02345","MetaCyc:2.2.1.4-RXN"],"synonyms":[{"name":"1-deoxy-D-altro-heptulose-7-phosphate synthase activity","type":"related"},{"name":"1-deoxy-D-altro-heptulose-7-phosphate synthetase activity","type":"related"},{"name":"3-hydroxybutan-2-one:D-ribose-5-phosphate aldehydetransferase activity","type":"related"},{"name":"3-hydroxybutan-3-one:D-ribose-5-phosphate aldehydetransferase activity","type":"related"}],"termid":"GO:0047156"}


id: GO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an actin fusion focus are transported to, or maintained in, a specific location. The actin fusion focus is an aster-like, F-actin-containing structure at the mating projection tip where the cell wall is degraded during conjugation with cellular fusion.","definition_xrefs":["PMID:28410370"],"gene_count":0,"genotype_count":0,"name":"obsolete actin fusion focus localization (obsolete GO:0061915)","synonyms":[{"name":"actin fusion focus localisation","type":"exact"}],"termid":"GO:0061915"}


id: MONDO:0007940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, susceptibility to","termid":"MONDO:0800188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, susceptibility to, 3","secondary_identifiers":["OMIM:154276","MEDGEN:418956","MESH:C535696","UMLS:C2930982"],"synonyms":[{"name":"MHS3","type":"related"},{"name":"Mhs3","type":"related"},{"name":"malignant hyperpyrexia susceptibility type 3","type":"related"},{"name":"malignant hyperthermia susceptibility 3","type":"exact"},{"name":"malignant hyperthermia susceptibility type 3","type":"related"},{"name":"malignant hyperthermia, susceptibility to, 3","type":"exact"},{"name":"malignant hyperthermia, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0007940","xrefs":{"Monarch":{"xref_id":"0007940"}}}


id: PBO:0087935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational elongation factor EF-1 alpha; GTP-bound active form, binds to and delivers aminoacylated tRNA to the A-site of ribosomes for elongation of nascent polypeptides; moonlighting function as an actin binding and bundling protein; association with GTPase Rho1p on the vacuolar membrane may facilitate F-actin remodeling; involved in tRNA re-export from the nucleus; Tef2p-RFP levels increase during replicative aging","termid":"PBO:0087935"}


id: PBO:0087510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa1p; required for import of long-chain fatty acids into peroxisomes; similar to human adrenoleukodystrophy transportesr ABCD1 and ABCD2, and ALD-related proteins; mutations in ABCD1 cause X-linked adrenoleukodystrophy (X-ALD), a peroxisomal disorder; human ABCD1 and ABCD2 can each partially complement yeast pxa1 pxa2 double null mutant","termid":"PBO:0087510"}


id: MONDO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alcohol-related neurodevelopmental disorder (obsolete MONDO:0000394)","termid":"MONDO:0000394","xrefs":{"Monarch":{"xref_id":"0000394"}}}


id: PBO:0065457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 4","termid":"PBO:0065457"}


id: PBO:0039414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angelman syndrome chromosome region","termid":"PBO:0039414"}


id: GO:0007305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the vitelline membrane portion of a chorion-containing eggshell. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitelline membrane formation","termid":"GO:0030704"},{"relation_name":"part_of","term_name":"chorion-containing eggshell formation","termid":"GO:0007304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"vitelline membrane formation involved in chorion-containing eggshell formation","synonyms":[{"name":"vitelline membrane formation in chorion-containing eggshell","type":"exact"}],"termid":"GO:0007305"}


id: GO:0050644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-4-coumarate + UDP-D-glucose = 4'-O-beta-D-glucosyl-cis-4-coumarate + H+ + UDP.","definition_xrefs":["EC:2.4.1.209","RHEA:13129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"cis-p-coumarate glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05324","MetaCyc:2.4.1.209-RXN"],"synonyms":[{"name":"UDP-glucose:cis-p-coumarate beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0050644"}


id: GO:0008159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that increases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive transcription elongation factor activity (obsolete GO:0008159)","synonyms":[{"name":"positive transcription elongation factor activity","type":"exact"}],"termid":"GO:0008159"}


id: PBO:0070758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 14","termid":"PBO:0070758"}


id: PBO:0029688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_hydrogen_peroxide-induced_proteins_during_vegetative_growth","termid":"PBO:0029688"}


id: PBO:0047220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 225 member B","termid":"PBO:0047220"}


id: MONDO:0004683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Evans' syndrome (obsolete MONDO:0004683)","termid":"MONDO:0004683","xrefs":{"Monarch":{"xref_id":"0004683"}}}


id: GO:0110027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA strand resection involved in replication fork processing.","definition_xrefs":["PMID:28475874","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA strand resection involved in replication fork processing","termid":"GO:0110026"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"DNA strand resection involved in replication fork processing","termid":"GO:0110025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA strand resection involved in replication fork processing","termid":"GO:0110027"}


id: PBO:0087213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine methyltransferase; functions along with Mht1p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio; SAM4 has a paralog, YMR321C, that arose from a single-locus duplication","termid":"PBO:0087213"}


id: MONDO:0007231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachytelephalangy - dysmorphism - Kallmann syndrome is a developmental anomaly characterized by brachytelephalangy, distinct craniofacial features (prominent square forehead, telecanthus, small nose, malar hypoplasia, smooth philtrum and thin upper lip), and relative to other family members, a short stature. These features may be associated with anosmia and hypogonadotropic hypogonadism (considered as Kallman syndrome). Brachytelephalangy - dysmorphism - Kallmann syndrome has been described in a mother and her son and there have been no further descriptions in the literature since 1986.","definition_xrefs":["Orphanet:1295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachytelephalangy-dysmorphism-Kallmann syndrome","secondary_identifiers":["MEDGEN:444052","GARD:16562","MESH:C537101","UMLS:C2931421","OMIM:113480"],"synonyms":[{"name":"BRACHYTELEPHALANGY with characteristic facies and Kallmann syndrome","type":"related"}],"termid":"MONDO:0007231","xrefs":{"Monarch":{"xref_id":"0007231"}}}


id: GO:0043000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi to plasma membrane CFTR protein transport (obsolete GO:0043000)","synonyms":[{"name":"Golgi to plasma membrane cystic fibrosis transmembrane conductance regulator protein transport","type":"exact"}],"termid":"GO:0043000"}


id: PBO:0061993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily D member 2","termid":"PBO:0061993"}


id: FYPO:0002454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and have abnormal cell morphology (i.e. size, shape, or structure), in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population with abnormal cell morphology (obsolete FYPO:0002454)","termid":"FYPO:0002454"}


id: FYPO:0005360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the RTS1 replication termination site prevents replication fork movement in the opposite of normal direction. Normally, RTS1 acts as a barrier to replication forks moving in the cenII-distal direction.","definition_xrefs":["PomBase:mah","PMID:18723894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"reversed RTS1 barrier polarity","synonyms":[{"name":"reversed RTS1 barrier polarity during mitotic cell cycle","type":"related"},{"name":"reversed RTS1 barrier polarity during vegetative growth","type":"exact"}],"termid":"FYPO:0005360"}


id: PR:O94614
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chr4 gene.","definition_xrefs":["UniProtKB:O94614","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.01c","synonyms":[{"name":"Chs four homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-chr4","type":"exact"}],"termid":"PR:O94614"}


id: GO:0015677
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111926],"is_not":false,"summary":null,"term":"GO:0015677"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"copper ion import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper ion uptake","type":"exact"}],"termid":"GO:0015677","terms_by_termid":{"GO:0015677":null}}


id: PBO:0076712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 15","termid":"PBO:0076712"}


id: MONDO:0005826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumonia due to aspiration or inhalation of various oily or fatty substances.","definition_xrefs":["MESH:D011017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspiration pneumonitis","termid":"MONDO:0002572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid pneumonia","secondary_identifiers":["UMLS:C0032298","DOID:3241","EFO:0007345","MEDGEN:19362","SCTID:707449006"],"synonyms":[{"name":"cholesterol pneumonia","type":"related"},{"name":"exogenous lipoid pneumonia","type":"exact"},{"name":"lipoid pneumonitis","type":"exact"},{"name":"lipoidpneumonitis","type":"exact"},{"name":"pneumonia lipid","type":"related"}],"termid":"MONDO:0005826","xrefs":{"Monarch":{"xref_id":"0005826"}}}


id: GO:0048351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of paraxial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate specification","termid":"GO:0048349"},{"relation_name":"negatively_regulates","term_name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of paraxial mesodermal cell fate specification","synonyms":[{"name":"down regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"downregulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"inhibition of paraxial mesodermal cell fate specification","type":"narrow"}],"termid":"GO:0048351"}


id: MONDO:0022887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofrontonasal syndrome Teebi type","termid":"MONDO:0022887","xrefs":{"Monarch":{"xref_id":"0022887"}}}


id: PBO:0029991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_thiamine","termid":"PBO:0029991"}


id: PR:Q09094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec15 gene.","definition_xrefs":["UniProtKB:Q09094","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.14","synonyms":[{"name":"Spom972h-rec15","type":"exact"}],"termid":"PR:Q09094"}


id: PBO:0043817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 8","termid":"PBO:0043817"}


id: MONDO:0006438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial chondromatosis is a type of non-cancerous tumor that arises in the lining of a joint. The knee is most commonly affected, however it can affect any joint. The tumors begin as small nodules of cartilage. These nodules can separate and become loose within the joint. Some tumors may be no larger than a grain of rice. Synovial chondromatosis most commonly occurs in adults ages 20 to 50. Signs and symptoms may include pain, swelling, a decreased range of motion, and locking of the joint. The exact underlying cause of the condition is unknown. Treatment may involve surgery to remove the tumor. Recurrence of the condition is common.","definition_xrefs":["GARD:0006054"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"connective and soft tissue neoplasm","termid":"MONDO:0044334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial chondromatosis","secondary_identifiers":["MESH:D015838","EFO:1000557","MEDGEN:40275","NCIT:C34467","UMLS:C0008476"],"synonyms":[{"name":"Henderson-Jones syndrome","type":"exact"},{"name":"Reichel's syndrome","type":"exact"},{"name":"synovial osteochondromatosis","type":"related"}],"termid":"MONDO:0006438","xrefs":{"Monarch":{"xref_id":"0006438"}}}


id: GO:0075130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of protein kinase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of host protein kinase-mediated signal transduction (obsolete GO:0075130)","synonyms":[{"name":"modulation by symbiont of host protein kinase-mediated signal transduction","type":"exact"}],"termid":"GO:0075130"}


id: PBO:0017589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated beclin family protein Atg6","termid":"PBO:0017589"}


id: PBO:0074088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC26A4 antisense RNA 1","termid":"PBO:0074088"}


id: PBO:0030143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_L-thialysine","termid":"PBO:0030143"}


id: GO:0060577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the pulmonary venous blood vessels are generated and organized. Pulmonary veins are blood vessels that transport blood from the lungs to the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary vein morphogenesis","synonyms":[{"name":"pulmonary venous blood vessel morphogenesis","type":"related"}],"termid":"GO:0060577"}


id: GO:0045004
data:
  {"annotated_genes":["SJAG_02908","SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106506,108258],"is_not":false,"summary":null,"term":"GO:0045004"}]},"cv_name":"biological_process","definition":"Correction of replication errors by DNA polymerase using a 3'-5' exonuclease activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"},{"relation_name":"is_a","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02818":null,"SJAG_02908":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260","GO:0006281"],"is_obsolete":false,"name":"DNA replication proofreading","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045004","terms_by_termid":{"GO:0045004":null}}


id: GO:0042352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of GDP-L-fucose from L-fucose, without de novo synthesis. L-fucose is phosphorylated by fucokinase and then converted by fucose-1-phosphate guanylyltransferase (EC:2.7.7.30).","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-L-fucose biosynthetic process","termid":"GO:0042350"},{"relation_name":"is_a","term_name":"nucleotide salvage","termid":"GO:0043173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GDP-L-fucose salvage","secondary_identifiers":["MetaCyc:PWY-6"],"synonyms":[{"name":"GDP-L-fucose biosynthesis, salvage pathway","type":"exact"},{"name":"GDP-L-fucose biosynthetic process, salvage pathway","type":"exact"}],"termid":"GO:0042352"}


id: PBO:0088981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L43","termid":"PBO:0088981"}


id: GO:0019226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurological system process in which a signal is transmitted through the nervous system by a combination of action potential propagation and synaptic transmission.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transmission of nerve impulse","synonyms":[{"name":"conduction of nerve impulse","type":"exact"},{"name":"signal transmission along a neuron","type":"exact"}],"termid":"GO:0019226"}


id: PBO:0042514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDAN1 interacting nuclease 1","termid":"PBO:0042514"}


id: GO:1901641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ITP.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate binding","termid":"GO:0035639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ITP binding","termid":"GO:1901641"}


