# terms

id: MONDO:1010820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, goat","secondary_identifiers":["OMIA:000810-9925"],"termid":"MONDO:1010820","xrefs":{"Monarch":{"xref_id":"1010820"}}}


id: FYPO:0007901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal.","definition_xrefs":["PMID:29622660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of R-loops","synonyms":[{"name":"increased level of R-loops","type":"exact"},{"name":"increased level of RNA-DNA hybrids","type":"exact"}],"termid":"FYPO:0007901"}


id: PBO:0086377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATPase of the AAA family; interacts with the Sin1p transcriptional repressor in the two-hybrid system","termid":"PBO:0086377"}


id: PBO:0011488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing protein, predicted ubiquitin ligase (predicted)","termid":"PBO:0011488"}


id: FYPO:0003545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of mitotic cell cycle arrest or delay due to regulation by the DNA replication checkpoint is greater than normal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle DNA replication checkpoint","synonyms":[{"name":"increased duration of DNA replication checkpoint","type":"broad"},{"name":"increased duration of mitotic cell cycle DNA replication checkpoint activation","type":"exact"},{"name":"mitotic cell cycle DNA replication checkpoint activated","type":"related"},{"name":"prolonged mitotic cell cycle DNA replication checkpoint","type":"exact"}],"termid":"FYPO:0003545"}


id: PBO:0069855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1141, pseudogene","termid":"PBO:0069855"}


id: PBO:0041671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase","termid":"PBO:0041671"}


id: GO:1903647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chlorophyll catabolic process.","definition_xrefs":["GO_REF:0000058","PMID:24719469","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll catabolic process","termid":"GO:0010271"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole catabolic process","termid":"GO:1901405"},{"relation_name":"negatively_regulates","term_name":"chlorophyll catabolic process","termid":"GO:0015996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chlorophyll catabolic process","synonyms":[{"name":"down regulation of chlorophyll breakdown","type":"exact"},{"name":"down regulation of chlorophyll catabolic process","type":"exact"},{"name":"down regulation of chlorophyll catabolism","type":"exact"},{"name":"down regulation of chlorophyll degradation","type":"exact"},{"name":"down-regulation of chlorophyll breakdown","type":"exact"},{"name":"down-regulation of chlorophyll catabolic process","type":"exact"},{"name":"down-regulation of chlorophyll catabolism","type":"exact"},{"name":"down-regulation of chlorophyll degradation","type":"exact"},{"name":"downregulation of chlorophyll breakdown","type":"exact"},{"name":"downregulation of chlorophyll catabolic process","type":"exact"},{"name":"downregulation of chlorophyll catabolism","type":"exact"},{"name":"downregulation of chlorophyll degradation","type":"exact"},{"name":"inhibition of chlorophyll breakdown","type":"narrow"},{"name":"inhibition of chlorophyll catabolic process","type":"narrow"},{"name":"inhibition of chlorophyll catabolism","type":"narrow"},{"name":"inhibition of chlorophyll degradation","type":"narrow"},{"name":"negative regulation of chlorophyll breakdown","type":"exact"},{"name":"negative regulation of chlorophyll catabolism","type":"exact"},{"name":"negative regulation of chlorophyll degradation","type":"exact"}],"termid":"GO:1903647"}


id: PBO:0017993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor transmembrane transporter Mam1","termid":"PBO:0017993"}


id: MONDO:0016972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 22","secondary_identifiers":["GARD:20891","MEDGEN:1826033","Orphanet:263004","UMLS:C5679699"],"synonyms":[{"name":"partial duplication of chromosome 22q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 22","type":"exact"},{"name":"partial trisomy of chromosome 22q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 22","type":"exact"}],"termid":"MONDO:0016972","xrefs":{"Monarch":{"xref_id":"0016972"}}}


id: PR:Q10329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pre6 gene.","definition_xrefs":["UniProtKB:Q10329","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.16","synonyms":[{"name":"Spom972h-pre6","type":"exact"}],"termid":"PR:Q10329"}


id: MONDO:0958335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 1","termid":"MONDO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 1d","secondary_identifiers":["OMIM:620780"],"termid":"MONDO:0958335","xrefs":{"Monarch":{"xref_id":"0958335"}}}


id: PBO:0081954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein 1","termid":"PBO:0081954"}


id: MONDO:0017402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial isolated arrhythmogenic ventricular dysplasia, biventricular form","secondary_identifiers":["MEDGEN:1843254","Orphanet:293899","GARD:17346","UMLS:C5679932","DOID:0070535"],"synonyms":[{"name":"familial isolated arrhythmogenic ventricular cardiomyopathy, biventricular form","type":"exact"}],"termid":"MONDO:0017402","xrefs":{"Monarch":{"xref_id":"0017402"}}}


id: PBO:0062211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AK member 2","termid":"PBO:0062211"}


id: GO:0008412
data:
  {"annotated_genes":["SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97588],"is_not":false,"summary":null,"term":"GO:0008412"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + an all-trans-polyprenyl diphosphate = a 4-hydroxy-3-all-trans-polyprenylbenzoate + diphosphate.","definition_xrefs":["RHEA:44504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyltransferase activity","termid":"GO:0002094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate polyprenyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000043","GO:0048044","EC:2.5.1.39","GO:0048043","MetaCyc:RXN-11368"],"synonyms":[{"name":"4-HB polyprenyltransferase activity","type":"exact"},{"name":"4-hydroxybenzoate nonaprenyltransferase activity","type":"narrow"},{"name":"PHB polyprenyl diphosphate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate-polyprenyl diphosphate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate:polyprenyltransferase activity","type":"exact"}],"termid":"GO:0008412","terms_by_termid":{"GO:0008412":null}}


id: MOD:00259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and the 5'-end of DNA through a phosphodiester bond to form O4'-(phospho-5'-DNA)-L-tyrosine.","definition_xrefs":["PubMed:1861973","PubMed:3684578","RESID:AA0254","PubMed:2940511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-DNA)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-deoxyribonucleic acid phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"ACT_SITE O-(5'-phospho-DNA)-tyrosine intermediate","type":"exact"},{"name":"MOD_RES O-(5'-phospho-DNA)-tyrosine","type":"exact"},{"name":"O4'-(phospho-5'-DNA)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00259"}


id: PBO:0068058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 363","termid":"PBO:0068058"}


id: PBO:0018196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-activated protein serine/threonine kinase alpha subunit Ssp2","termid":"PBO:0018196"}


id: GO:0002785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial humoral response","termid":"GO:0008348"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide production","synonyms":[{"name":"down regulation of antimicrobial peptide production","type":"exact"},{"name":"down-regulation of antimicrobial peptide production","type":"exact"},{"name":"downregulation of antimicrobial peptide production","type":"exact"},{"name":"inhibition of antimicrobial peptide production","type":"narrow"}],"termid":"GO:0002785"}


id: GO:0046252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products.","definition_xrefs":["PMID:6508079","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene biosynthetic process","synonyms":[{"name":"toluene anabolism","type":"exact"},{"name":"toluene biosynthesis","type":"exact"},{"name":"toluene formation","type":"exact"},{"name":"toluene synthesis","type":"exact"}],"termid":"GO:0046252"}


id: GO:0033117
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle filled with crystalline protein that shows sequence similarities with various esterases.","definition_xrefs":["GOC:ecd","PMID:2307702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"esterosome","termid":"GO:0033117"}


id: GO:2000721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation (obsolete GO:2000721)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"activation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of smooth muscle cell differentiation","type":"related"},{"name":"positive regulation of transcription from Pol II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global of nonstriated muscle cell differentiation","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global of smooth muscle cell differentiation","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000721"}


id: MONDO:0011203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"campomelic dysplasia","termid":"MONDO:0007251"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pierre Robin sequence with pectus excavatum and rib and scapular anomalies","secondary_identifiers":["UMLS:C1865783","MESH:C535775","OMIM:602196","MEDGEN:355549","GARD:10090"],"synonyms":[{"name":"Pierre Robin sequence with pectus excavatum and rib and scapular anomalies","type":"exact"},{"name":"campomelic dysplasia, mild","type":"related"},{"name":"skeletal dysplasia related to campomelic dysplasia","type":"related"}],"termid":"MONDO:0011203","xrefs":{"Monarch":{"xref_id":"0011203"}}}


id: PBO:0066167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal biogenesis factor","termid":"PBO:0066167"}


id: GO:0015018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-(beta-D-galactosyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-xylosyl)-L-seryl-[protein] + UDP-alpha-D-glucuronate = 3-O-(beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl)-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["EC:2.4.1.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.135-RXN","Reactome:R-HSA-1889955","RHEA:24168","Reactome:R-HSA-3560802","Reactome:R-HSA-9638064"],"synonyms":[{"name":"UDP-glucuronate:3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosyl-protein D-glucuronosyltransferase activity","type":"related"},{"name":"UDPglucuronate:3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosyl-protein D-glucuronosyltransferase activity","type":"related"},{"name":"glucuronosyltransferase I activity","type":"narrow"},{"name":"uridine diphosphate glucuronic acid:acceptor glucuronosyltransferase activity","type":"related"}],"termid":"GO:0015018"}


id: GO:0046612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The V1 domain of a proton-transporting V-type ATPase found in the lysosomal membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar proton-transporting V-type ATPase, V1 domain","termid":"GO:0000221"},{"relation_name":"part_of","term_name":"lysosomal proton-transporting V-type ATPase complex","termid":"GO:0046611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"lysosomal proton-transporting V-type ATPase, V1 domain","synonyms":[{"name":"lysosomal hydrogen ion-transporting ATPase V1 domain","type":"exact"}],"termid":"GO:0046612"}


id: MONDO:0020550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gestational choriocarcinoma is a gestational trophoblastic tumor (GTT) occurring secondary to pregnancy (ectopic or normal), miscarriage, voluntary termination of pregnancy (VTP) or a hydatidiform mole.","definition_xrefs":["Orphanet:99926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"},{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gestational choriocarcinoma","secondary_identifiers":["NCIT:C4646","MEDGEN:138102","ICD9:181","DOID:2025","icd11.foundation:2136066651","SCTID:417570003","GARD:19712","UMLS:C0349557"],"synonyms":[{"name":"gestational choriocarcinoma","type":"exact"},{"name":"gestational choriocarcinoma (morphologic abnormality)","type":"exact"},{"name":"gestational chorionepithelioma","type":"exact"},{"name":"molar pregnancy with choriocarcinoma","type":"exact"}],"termid":"MONDO:0020550","xrefs":{"Monarch":{"xref_id":"0020550"}}}


id: GO:0110147
data:
  {"annotated_genes":["SJAG_05338","SJAG_04896","SJAG_04679"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94616,96016,118116],"is_not":false,"summary":null,"term":"GO:0110147"}]},"cv_name":"biological_process","definition":"A process that contributes to the delivery of nickel ions to a target protein to facilitate its maturation.","definition_xrefs":["PMID:24115911","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"protein maturation by nickel ion transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110147","terms_by_termid":{"GO:0110147":null}}


id: PBO:0073200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3A","termid":"PBO:0073200"}


id: MONDO:0033948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired angioedema","termid":"MONDO:0019624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired angioedema with C1Inh deficiency","secondary_identifiers":["GARD:22196","Orphanet:528663"],"termid":"MONDO:0033948","xrefs":{"Monarch":{"xref_id":"0033948"}}}


id: PBO:0044528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled binding antagonist of beta catenin 2","termid":"PBO:0044528"}


id: PBO:0065962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD50 double strand break repair protein","termid":"PBO:0065962"}


id: GO:0098653
data:
  {"annotated_genes":["SJAG_04076","SJAG_02624","SJAG_00727","SJAG_05196","SJAG_01805","SJAG_01613","SJAG_00794","SJAG_02737","SJAG_01745","SJAG_02814","SJAG_03126","SJAG_03683","SJAG_03540","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111099],"is_not":false,"summary":null,"term":"GO:0098653"},{"annotations":[90546,116075,88800,101998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[115058,108293,98416,117787,117271,94506,99568,101620,92992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The process by which centromeres/kinetochores become localized to clusters.","definition_xrefs":["GOC:di","PMID:10761928","GOC:dos","PMID:23283988","PMID:8486732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"is_a","term_name":"centromere localization","termid":"GO:0072765"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_00794":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03126":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"centromere clustering","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098587"],"synonyms":[{"name":"kinetochore clustering","type":"exact"}],"termid":"GO:0098653","terms_by_termid":{"GO:0072766":null,"GO:0098653":null,"GO:1990571":null}}


id: GO:0018390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methyl esterification of peptidyl-glutamic acid or peptidyl-glutamine to form the derivative glutamic acid 5-methyl ester.","definition_xrefs":["RESID:AA0072"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamic acid 5-methyl ester biosynthetic process from peptidyl-glutamic acid or peptidyl-glutamine (obsolete GO:0018390)","synonyms":[{"name":"peptidyl-L-glutamic acid 5-methyl ester anabolism from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester formation from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester synthesis from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"}],"termid":"GO:0018390"}


id: PBO:0062345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 4 pseudogene","termid":"PBO:0062345"}


id: GO:0030118
data:
  {"annotated_genes":["SJAG_00104","SJAG_02177","SJAG_01167","SJAG_02282","SJAG_04644","SJAG_04609","SJAG_01809","SJAG_04517","SJAG_04565","SJAG_00379","SJAG_04931","SJAG_02805","SJAG_00800"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118004,111914,100310,112129],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[110792,110733,95460,107482],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[110637],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030131"},{"annotations":[94087,112038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030130"},{"annotations":[94088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071439"},{"annotations":[114011,117615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030125"}]},"cv_name":"cellular_component","definition":"A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes.","definition_xrefs":["GOC:mah","PMID:9531549","PMID:11252894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane coat","termid":"GO:0030117"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"clathrin coat","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao879919129","GO:0016190","Wikipedia:Clathrin"],"synonyms":[{"name":"clathrin cage","type":"exact"}],"termid":"GO:0030118","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null,"GO:0030131":null,"GO:0071439":null}}


id: MONDO:1011659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric dilatation volvulus syndrome, non-human animal","secondary_identifiers":["OMIA:000404"],"termid":"MONDO:1011659","xrefs":{"Monarch":{"xref_id":"1011659"}}}


id: PBO:0061791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 2 pseudogene 1","termid":"PBO:0061791"}


id: PBO:0057775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2278","termid":"PBO:0057775"}


id: GO:0031903
data:
  {"annotated_genes":["SJAG_02997","SJAG_03324","SJAG_04763","SJAG_02619","SJAG_03715","SJAG_03440","SJAG_00891","SJAG_02693","SJAG_00702","SJAG_05950","SJAG_00947","SJAG_04428","SJAG_04315","SJAG_03781","SJAG_04146","SJAG_03493","SJAG_01165","SJAG_01685"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89431,114894,97771,110991,96151,114434,94621,116386,105847,102267,116436,110381,110533,117297,114033,100491,89634,104402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a microbody.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody","termid":"GO:0042579"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03493":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04763":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"microbody membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031903","terms_by_termid":{"GO:0005778":null}}


id: PBO:0079035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 4-1","termid":"PBO:0079035"}


id: MONDO:1011675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoadrenocorticism, non-human animal","secondary_identifiers":["OMIA:000519"],"termid":"MONDO:1011675","xrefs":{"Monarch":{"xref_id":"1011675"}}}


id: PBO:0042878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 161","termid":"PBO:0042878"}


id: GO:0098732
data:
  {"annotated_genes":["SJAG_02056","SJAG_03377","SJAG_02268","SJAG_00774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100123,61173,61174,68984,57222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098734"}]},"cv_name":"biological_process","definition":"The removal of an acyl group, any group or radical of the form RCO- where R is an organic group, from a macromolecule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null,"SJAG_03377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule deacylation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098732","terms_by_termid":{"GO:0098734":null}}


id: GO:0048337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell differentiation","termid":"GO:1905772"},{"relation_name":"positively_regulates","term_name":"mesodermal cell fate specification","termid":"GO:0007501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesodermal cell fate specification","synonyms":[{"name":"activation of mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of mesodermal cell fate specification","type":"exact"},{"name":"upregulation of mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048337"}


id: PBO:0047464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCRL4 pseudogene 1","termid":"PBO:0047464"}


id: PBO:0061996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily F member 1","termid":"PBO:0061996"}


id: PBO:0063710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5","termid":"PBO:0063710"}


id: PBO:0029185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_6-phosphate_level","termid":"PBO:0029185"}


id: PBO:0080383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 13 homolog B","termid":"PBO:0080383"}


id: PBO:0072173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16","termid":"PBO:0072173"}


id: FYPO:0005997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any small nuclear RNA (snRNA) primary transcript, snRNA precursor or processing intermediate, or mature snRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"altered snRNA or precursor level","synonyms":[{"name":"abnormal snRNA or precursor level","type":"exact"},{"name":"altered snRNA or precursor accumulation","type":"related"},{"name":"altered snRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered snRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered snRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005997"}


id: PBO:0052944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated like protein 29-1","termid":"PBO:0052944"}


id: MONDO:0017081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated encephalocele","termid":"MONDO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"parietal encephalocele","secondary_identifiers":["GARD:20970","UMLS:C0431294","icd11.foundation:1122294944","SCTID:253109005","MEDGEN:488903","Orphanet:268826"],"termid":"MONDO:0017081","xrefs":{"Monarch":{"xref_id":"0017081"}}}


id: PBO:0080157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valosin containing protein interacting protein 1","termid":"PBO:0080157"}


id: PBO:0067607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 775, pseudogene","termid":"PBO:0067607"}


id: MONDO:0003423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well-circumscribed glandular neoplasm that arises from the middle ear and may exhibit neuroendocrine differentiation. It usually presents with conductive hearing loss.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign neoplasm of middle ear","termid":"MONDO:0021482"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle ear adenoma","secondary_identifiers":["DOID:5387","UMLS:C1334759","SCTID:734078009","MEDGEN:277370","NCIT:C6834"],"synonyms":[{"name":"adenoma of middle ear","type":"related"},{"name":"adenoma of the middle ear","type":"exact"},{"name":"middle ear adenoma","type":"exact"}],"termid":"MONDO:0003423","xrefs":{"Monarch":{"xref_id":"0003423"}}}


id: PBO:0052129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 1","termid":"PBO:0052129"}


id: MONDO:0010004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"EEC syndrome is a genetic developmental disorder characterized by ectrodactyly, ectodermal dysplasia, and orofacial clefts (cleft lip/palate).","definition_xrefs":["Orphanet:1896"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"EEC syndrome","secondary_identifiers":["MESH:C536189","OMIM:268650","SCTID:39788007","GARD:2076","NORD:1079","DOID:0060782","NCIT:C148261","UMLS:C0406704","MEDGEN:98357"],"synonyms":[{"name":"Ectrodactyly Ectodermal Dysplasia Cleft Lip/Palate","type":"exact"},{"name":"RUDIGER syndrome","type":"related"},{"name":"Rudiger syndrome 1","type":"exact"},{"name":"Walker-Clodius syndrome","type":"exact"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft lip-palate syndrome","type":"exact"},{"name":"ectrodactyly-cleft lip/palate syndrome","type":"related"},{"name":"ectrodactyly-ectodermal dysplasia-cleft lip/cleft palate","type":"related"},{"name":"ectrodactyly-ectodermal dysplasia-cleft lip/palate syndrome","type":"exact"},{"name":"ectrodactyly-ectodermal dysplasia-cleft syndrome","type":"exact"},{"name":"ectrodactyly-ectodermal dysplasia-clefting (EEC) syndrome","type":"related"},{"name":"ectrodactyly-ectodermal dysplasia-clefting syndrome","type":"exact"}],"termid":"MONDO:0010004","xrefs":{"Monarch":{"xref_id":"0010004"}}}


id: PBO:0114385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulphite transmembrane transporter Ssu2","termid":"PBO:0114385"}


id: MOD:01304
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an N4-hexosaminyl-L-lysine, as a synthetic peptide protectting group.","definition_xrefs":["Unimod:454#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminylated residue","termid":"MOD:00876"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N6-hexosaminylated lysine","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"}],"termid":"MOD:01304"}


id: GO:0102346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxycerotoyl-CoA(4-) = trans-2-hexacosenoyl-CoA(4-) + H2O.","definition_xrefs":["EC:4.2.1.134","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-cerotoyl-CoA dehydratase activity (obsolete GO:0102346)","termid":"GO:0102346"}


id: GO:0007551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of dosage compensation (obsolete GO:0007551)","synonyms":[{"name":"maintenance of dosage compensation","type":"exact"}],"termid":"GO:0007551"}


id: GO:0030741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + myo-inositol = 1D-1-O-methyl-myo-inositol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:17565","EC:2.1.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol 1-methyltransferase activity","secondary_identifiers":["MetaCyc:MYO-INOSITOL-3-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01188"],"synonyms":[{"name":"S-adenosyl-L-methionine:1D-myo-inositol 1-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:myo-inositol 3-O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:myo-inositol 3-methyltransferase activity","type":"related"},{"name":"inositol 3-O-methyltransferase (name based on 1L-numbering system and not 1D-numbering)","type":"related"},{"name":"inositol 3-O-methyltransferase activity","type":"related"},{"name":"inositol D-1-methyltransferase activity","type":"related"},{"name":"myo-inositol 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0030741"}


id: PBO:0075435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member D","termid":"PBO:0075435"}


id: FYPO:0000970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mitomycin C. Cells stop growing (and may die) at a concentration of mitomycin C that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to mitomycin C","synonyms":[{"name":"hypersensitive to mitomycin C","type":"exact"},{"name":"sensitive to mitomycin C during mitotic cell cycle","type":"related"},{"name":"sensitive to mitomycin C during vegetative growth","type":"exact"}],"termid":"FYPO:0000970"}


id: GO:2001270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis (obsolete GO:2001270)","synonyms":[{"name":"regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001270"}


id: MOD:01599
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-118 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01599"}


id: GO:1903896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the IRE1-mediated unfolded protein response.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of IRE1-mediated unfolded protein response","termid":"GO:1903894"},{"relation_name":"positively_regulates","term_name":"IRE1-mediated unfolded protein response","termid":"GO:0036498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of IRE1-mediated unfolded protein response","synonyms":[{"name":"activation of IRE1 branch of UPR","type":"narrow"},{"name":"activation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of IRE1-mediated unfolded protein response","type":"narrow"},{"name":"activation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"activation of IRE1p unfolded protein response","type":"narrow"},{"name":"activation of UPR signaling by IRE1 stress sensor","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"narrow"},{"name":"activation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"positive regulation of ERN1-mediated unfolded protein response","type":"related"},{"name":"positive regulation of IRE1 branch of UPR","type":"exact"},{"name":"positive regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"positive regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"positive regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"positive regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"up regulation of IRE1 branch of UPR","type":"exact"},{"name":"up regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"up regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"up regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"up regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"up regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"up-regulation of IRE1 branch of UPR","type":"exact"},{"name":"up-regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"up-regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"up-regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"up-regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"upregulation of IRE1 branch of UPR","type":"exact"},{"name":"upregulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"upregulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"upregulation of IRE1p unfolded protein response","type":"narrow"},{"name":"upregulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"upregulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:1903896"}


id: MONDO:0044254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dermatoglyphics--hypothenar radial arch (obsolete MONDO:0044254)","secondary_identifiers":["OMIM:221780"],"synonyms":[{"name":"dermatoglyphics--hypothenar radial arch","type":"related"}],"termid":"MONDO:0044254","xrefs":{"Monarch":{"xref_id":"0044254"}}}


id: GO:0035224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the genital disc. An anterior and posterior compartment form in each of the three genital disc primoridia (the female genital disc primordium, the male genital disc primordium and the anal primordium).","definition_xrefs":["PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"genital disc pattern formation","termid":"GO:0035221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc anterior/posterior pattern formation","termid":"GO:0035224"}


id: GO:0090159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids that contributes to endoplasmic reticulum membrane organization.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006629"],"is_obsolete":false,"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organization","synonyms":[{"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organisation","type":"exact"}],"termid":"GO:0090159"}


id: PBO:0071881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 19","termid":"PBO:0071881"}


id: PBO:0038867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase tRNA specific 1","termid":"PBO:0038867"}


id: GO:0019815
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin complex that is present in the plasma membrane of B cells and that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"B cell receptor complex","secondary_identifiers":["GO:0042570"],"synonyms":[{"name":"B cell receptor accessory molecule complex","type":"related"},{"name":"B lymphocyte receptor complex","type":"exact"},{"name":"B-cell receptor complex","type":"exact"},{"name":"B-lymphocyte receptor complex","type":"exact"},{"name":"BCR complex","type":"exact"},{"name":"antibody","type":"related"},{"name":"immunoglobulin complex, membrane bound","type":"exact"}],"termid":"GO:0019815"}


id: MONDO:0006037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrolethalus (HLS) is a severe fetal malformation syndrome characterized by craniofacial dysmorphic features, central nervous system, cardiac, respiratory tract and limb abnormalities.","definition_xrefs":["Orphanet:2189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hydrolethalus syndrome","secondary_identifiers":["UMLS:C2931104","GARD:6683","MESH:C536079","DOID:0050779","OMIMPS:236680","MEDGEN:419335","SCTID:721232000"],"synonyms":[{"name":"HLS","type":"related"},{"name":"Salonen-Herva-Norio syndrome","type":"exact"},{"name":"hydrolethalus","type":"related"}],"termid":"MONDO:0006037","xrefs":{"Monarch":{"xref_id":"0006037"}}}


id: PBO:0086001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Pbi2p; double null mutant lacking Pbi2p and Yhr138cp exhibits highly fragmented vacuoles; protein abundance increases in response to DNA replication stress","termid":"PBO:0086001"}


id: PBO:0090782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 family RNA-binding protein Pof8/Lar7","termid":"PBO:0090782"}


id: GO:0022026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a epidermal growth factor receptor binding to one of its physiological ligands that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epidermal growth factor signaling pathway involved in forebrain neuron fate commitment","synonyms":[{"name":"epidermal growth factor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0022026"}


id: MONDO:0010109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraamelia with ectodermal dysplasia and lacrimal duct abnormalities","secondary_identifiers":["OMIM:273390","MEDGEN:444003","UMLS:C2931214","MESH:C536496"],"synonyms":[{"name":"Madokoro Ohdo Sonoda syndrome","type":"related"},{"name":"tetra-amelia, ectodermal dysplasia, and lacrimal duct abnormality","type":"related"},{"name":"tetraamelia with ectodermal dysplasia and lacrimal duct abnormalities","type":"exact"}],"termid":"MONDO:0010109","xrefs":{"Monarch":{"xref_id":"0010109"}}}


id: PBO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 1","termid":"PBO:0043889"}


id: PBO:0074730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 88","termid":"PBO:0074730"}


id: GO:0061123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis","termid":"GO:0050928"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"},{"relation_name":"negatively_regulates","term_name":"chemotaxis to cAMP","termid":"GO:0043327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP","termid":"GO:0061123"}


id: PBO:0042501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 20","termid":"PBO:0042501"}


id: GO:0033909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,2-alpha-L-fucoside linkages in fucoidan without release of sulfate.","definition_xrefs":["PMID:6417453","PMID:11910806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"fucoidanase activity","secondary_identifiers":["MetaCyc:RXN-20949","EC:3.2.1.211"],"synonyms":[{"name":"poly(1,2-alpha-L-fucoside-4-sulfate) glycanohydrolase activity","type":"related"}],"termid":"GO:0033909"}


id: PBO:0064930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 regulatory subunit 3","termid":"PBO:0064930"}


id: PATO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process inhering in a biological process by virtue of the process unfolding in a location without oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity of a process to oxygen","termid":"PATO:0001458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic (for occurrence)","termid":"PATO:0001460"}


id: PBO:0043437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNKSR family member 3","termid":"PBO:0043437"}


id: GO:0008909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = isochorismate.","definition_xrefs":["EC:5.4.4.2","RHEA:18985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isochorismate synthase activity","secondary_identifiers":["MetaCyc:ISOCHORSYN-RXN","KEGG_REACTION:R01717"],"synonyms":[{"name":"isochorismate hydroxymutase activity","type":"related"},{"name":"isochorismate mutase activity","type":"exact"},{"name":"isochorismate synthetase activity","type":"related"}],"termid":"GO:0008909"}


id: GO:2000288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"positively_regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myoblast proliferation","termid":"GO:2000288"}


id: GO:0045276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A part of the respiratory chain located in the plasma membrane, containing about 10 polypeptide subunits including four redox centers: cytochrome b/b6, cytochrome c1 and an 2Fe-2S cluster. Catalyzes the oxidation of ubiquinol by oxidized cytochrome c1. Examples of this component are found in bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex III (obsolete GO:0045276)","synonyms":[{"name":"plasma membrane coenzyme Q-cytochrome c oxidoreductase complex","type":"exact"},{"name":"plasma membrane coenzyme Q-cytochrome c reductase complex","type":"exact"},{"name":"plasma membrane cytochrome bc1 complex","type":"exact"},{"name":"plasma membrane ubiquinol-cytochrome-c reductase complex","type":"exact"},{"name":"respiratory chain complex III","type":"broad"},{"name":"ubiquinol-cytochrome c oxidoreductase complex","type":"broad"},{"name":"ubiquinol-cytochrome-c reductase complex","type":"broad"}],"termid":"GO:0045276"}


id: PBO:0086006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SPS22 has a paralog, SPS2, that arose from the whole genome duplication; redundant with Sps2p for the organization of the beta-glucan layer of the spore wall","termid":"PBO:0086006"}


id: PBO:0056390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKAPK5 antisense RNA 1","termid":"PBO:0056390"}


id: MONDO:0019870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 1p36 is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 1, characterized by borderline to mild intellectual disability, mild developmental delay, metopic craniosynostosis and mild craniofacial dysmorphism (incl. slopping forehead, bitemporal narrowing, blepharophimosis). Other associated abnormalities may include growth retardation, microcephaly, large hands, syndactyly, supernumerary ribs, rectal stenosis and/or anterior displacement of anus. Congenital heart malformations (e.g. atrial septal defect, patent ductus arteriosus) have also been reported.","definition_xrefs":["Orphanet:96069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 1","termid":"MONDO:0017012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 1p36","secondary_identifiers":["GARD:19303","MEDGEN:1646544","UMLS:C4707665","SCTID:766053003"],"synonyms":[{"name":"distal duplication 1p36","type":"exact"},{"name":"distal trisomy type 1p36","type":"exact"},{"name":"telomeric duplication 1p36","type":"exact"},{"name":"trisomy 1pter","type":"exact"}],"termid":"MONDO:0019870","xrefs":{"Monarch":{"xref_id":"0019870"}}}


id: GO:0052027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host signal transduction pathway","secondary_identifiers":["GO:0052250"],"synonyms":[{"name":"modulation by symbiont of host signal transduction","type":"related"},{"name":"modulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"modulation of host signal transduction by symbiont","type":"exact"},{"name":"modulation of signal transduction in other organism involved in symbiotic interaction","type":"broad"},{"name":"perturbation of host signal transduction pathway","type":"exact"},{"name":"regulation by symbiont of host signal transduction pathway","type":"exact"}],"termid":"GO:0052027"}


id: GO:0034802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: branched-chain dodecylbenzene sulfonate + 1/2 O2 + H+ = sulfurous acid + branched-chain dodecyl-4-hydroxy-benzene + sulfite.","definition_xrefs":["UM-BBD_reactionID:r1079"],"gene_count":0,"genotype_count":0,"name":"obsolete branched-chain dodecylbenzene sulfonate monooxygenase activity (obsolete GO:0034802)","termid":"GO:0034802"}


id: PATO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's having 3 or more hues or degrees of saturations.","definition_xrefs":["merriam-webster.:merriam-webster."],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motley","termid":"PATO:0001534"}


id: FYPO:0000423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of endocytosis is decreased. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of endocytosis during vegetative growth","synonyms":[{"name":"decreased rate of actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"decreased rate of endocytosis during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis: decreased rate during vegetative growth","type":"related"},{"name":"reduced rate of endocytosis during vegetative growth","type":"exact"}],"termid":"FYPO:0000423"}


id: PBO:0028424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actomyosin_contractile_ring,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028424"}


id: GO:2000875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glyoxylate cycle.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of glyoxylate cycle","termid":"GO:2000874"},{"relation_name":"negatively_regulates","term_name":"glyoxylate cycle","termid":"GO:0006097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glyoxylate cycle","synonyms":[{"name":"negative regulation of glyoxylate bypass","type":"exact"}],"termid":"GO:2000875"}


id: SO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic rRNA is an RNA component of the small or large subunits of cytosolic ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA","synonyms":[{"name":"cytosolic rRNA","type":"exact"},{"name":"cytosolic ribosomal RNA","type":"exact"}],"termid":"SO:0002343"}


id: FYPO:0006513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal telomere morphology","termid":"FYPO:0006512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal telomere morphology during vegetative growth","synonyms":[{"name":"normal telomere morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006513"}


id: PBO:0042317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD36 molecule","termid":"PBO:0042317"}


id: GO:0004858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of dUTP pyrophosphatase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0004857","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"dUTP pyrophosphatase inhibitor activity","termid":"GO:0004858"}


id: PBO:0063488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDK4 antisense RNA 1","termid":"PBO:0063488"}


id: GO:0004644
data:
  {"annotated_genes":["SJAG_01814"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116486],"is_not":false,"summary":null,"term":"GO:0004644"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + N1-(5-phospho-D-ribosyl)glycinamide = tetrahydrofolate + N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide.","definition_xrefs":["EC:2.1.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01814":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73813","RHEA:15053","MetaCyc:GART-RXN"],"synonyms":[{"name":"10-formyltetrahydrofolate:5'-phosphoribosylglycinamide N-formyltransferase activity","type":"related"},{"name":"2-amino-N-ribosylacetamide 5'-phosphate transformylase activity","type":"related"},{"name":"5'-phosphoribosylglycinamide transformylase activity","type":"related"},{"name":"5,10-methenyltetrahydrofolate:2-amino-N-ribosylacetamide ribonucleotide transformylase activity","type":"related"},{"name":"GAR TFase activity","type":"related"},{"name":"GAR formyltransferase activity","type":"related"},{"name":"GAR transformylase activity","type":"related"},{"name":"GART activity","type":"related"},{"name":"glycinamide ribonucleotide transformylase activity","type":"related"}],"termid":"GO:0004644","terms_by_termid":{"GO:0004644":null}}


id: GO:0030395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lactose, a disaccharide of glucose and galactose, the carbohydrate of milk.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lactose binding","termid":"GO:0030395"}


id: FYPO:0002823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body does not occur during interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle pole body","termid":"FYPO:0000941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle pole body during interphase","synonyms":[{"name":"abolished protein localization to spindle pole body during interphase during mitotic cell cycle","type":"related"},{"name":"protein absent from mitotic spindle pole body during interphase","type":"related"},{"name":"protein localisation to mitotic spindle pole body abolished during interphase","type":"exact"},{"name":"protein localization to mitotic SPB abolished during interphase","type":"exact"},{"name":"protein localization to mitotic spindle pole body abolished during interphase","type":"exact"},{"name":"protein localization to spindle pole body abolished during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0002823"}


id: PBO:0068420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNPC3 divergent transcript","termid":"PBO:0068420"}


id: PBO:0077500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 218","termid":"PBO:0077500"}


id: PBO:0081533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 443","termid":"PBO:0081533"}


id: MONDO:0007951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"masticatory muscles, hypertrophy of","secondary_identifiers":["MEDGEN:322570","SCTID:699649006","OMIM:154850","MESH:C563600","UMLS:C1835093"],"synonyms":[{"name":"masseter muscle Hypertrophy","type":"related"},{"name":"masticatory muscles, hypertrophy of","type":"exact"}],"termid":"MONDO:0007951","xrefs":{"Monarch":{"xref_id":"0007951"}}}


id: MONDO:0002658
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the iris.","direct_ancestors":[{"relation_name":"is_a","term_name":"uveal cancer","termid":"MONDO:0002659"},{"relation_name":"is_a","term_name":"iris neoplasm","termid":"MONDO:0021224"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"iris cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3478","SCTID:188264002","UMLS:C0346372","MEDGEN:91103","NCIT:C4554"],"synonyms":[{"name":"cancer of iris","type":"exact"},{"name":"iris cancer","type":"exact"},{"name":"malignant iris neoplasm","type":"exact"},{"name":"malignant iris tumor","type":"exact"},{"name":"malignant iris tumour","type":"exact"},{"name":"malignant neoplasm of iris","type":"exact"},{"name":"malignant neoplasm of the iris","type":"exact"},{"name":"malignant tumor of iris","type":"exact"},{"name":"malignant tumor of the iris","type":"exact"},{"name":"malignant tumour of iris","type":"exact"},{"name":"malignant tumour of the iris","type":"exact"},{"name":"tumor of the iris","type":"broad"},{"name":"tumour of the iris","type":"broad"}],"termid":"MONDO:0002658","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002658"}}}


id: PBO:0087013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease MRP complex subunit; ribonuclease (RNase) MRP cleaves pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; binds to the NME1 RNA subunit of RNase MRP","termid":"PBO:0087013"}


id: MONDO:0009874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rabson-Mendenhall syndrome belongs to the group of extreme insulin-resistance syndromes (which also includes leprechaunism, the lipodystrophies, and the type A and B insulin resistance syndromes).","definition_xrefs":["Orphanet:769"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rabson-Mendenhall syndrome","secondary_identifiers":["MESH:D056731","icd11.foundation:1018973126","GARD:226","UMLS:C0271695","ICD9:259.8","MEDGEN:78783","NCIT:C131000","NORD:1645","OMIM:262190","SCTID:33559001"],"synonyms":[{"name":"Mendenhall syndrome","type":"related"},{"name":"Rabson-Mendenhall syndrome","type":"exact"},{"name":"pineal hyperplasia, insulin-resistant diabetes mellitus, and somatic abnormalities","type":"related"}],"termid":"MONDO:0009874","xrefs":{"Monarch":{"xref_id":"0009874"}}}


id: PBO:0083921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formylglycinamidine-ribonucleotide (FGAM)-synthetase; catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway","termid":"PBO:0083921"}


id: PR:O13650
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc9 gene.","definition_xrefs":["UniProtKB:O13650","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.07c","synonyms":[{"name":"Spom972h-sfc9","type":"exact"},{"name":"TFIIIC subunit sfc9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13650"}


id: GO:1901053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sarcosine.","definition_xrefs":["GOC:TermGenie","PMID:17951379","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"sarcosine metabolic process","termid":"GO:1901052"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"sarcosine catabolic process","synonyms":[{"name":"sarcosine breakdown","type":"exact"},{"name":"sarcosine catabolism","type":"exact"},{"name":"sarcosine degradation","type":"exact"}],"termid":"GO:1901053"}


id: MOD:00044
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to tele-phospho-L-histidine (N-tau-phospho-L-histidine, 1'-phospho-L-histidine).","definition_xrefs":["PubMed:11038361","PubMed:5642389","PubMed:6692818","RESID:AA0035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated L-histidine","termid":"MOD:00890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"1'-phospho-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(1-phosphono-1H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-phospho-L-histidine","type":"exact"},{"name":"2-azanyl-3-(1-phosphono-1H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"ACT_SITE Tele-phosphohistidine intermediate","type":"exact"},{"name":"MOD_RES Tele-phosphohistidine","type":"exact"},{"name":"N(tau)-phosphohistidine","type":"exact"},{"name":"N1-phosphonohistidine","type":"exact"},{"name":"NE2-phosphonohistidine","type":"exact"},{"name":"NtPHis","type":"exact"},{"name":"Ntau-phosphorylated L-histidine","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"histidine-3-phosphate","type":"related"},{"name":"histidine-N(epsilon)-phosphate","type":"exact"},{"name":"histidine-N1'-phosphate","type":"exact"},{"name":"tele-phosphohistidine","type":"exact"}],"termid":"MOD:00044"}


id: PATO:0002632
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality in which the effect or outcome is not primary or the focus of the observation.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary","termid":"PATO:0002632"}


id: PBO:0070040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1337, pseudogene","termid":"PBO:0070040"}


id: MONDO:0006368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare, benign or malignant mesenchymal tumor arising from the soft tissues or bones. It is a distinctive tumor, which usually displays the following morphologic characteristics: low cellularity, myxoid changes, presence of spindled cells and osteoclasts, hemangiopericytoma-like vessels, hemorrhage, and osteoid-like matrix. It is associated with the presence of a paraneoplastic syndrome called osteogenic osteomalacia. This syndrome usually precedes the appearance of the tumor, and it is characterized by phosphaturia, hypophosphatemia, normal serum calcium levels, and decreased levels of 1,25-dihydroxyvitamin D3. Patients present with bone and muscle pain, severe muscle weakness, fractures, gait disturbances, skeletal deformity, height loss, and slow growth. The metabolic disturbances improve or completely disappear after the complete resection of the tumor.","definition_xrefs":["NCIT:C67237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphaturic mesenchymal tumor","secondary_identifiers":["MEDGEN:371179","UMLS:C1831619","EFO:1000473"],"synonyms":[{"name":"phosphaturic mesenchymal tumor","type":"exact"},{"name":"phosphaturic mesenchymal tumor, mixed connective tissue type","type":"exact"},{"name":"phosphaturic mesenchymal tumor, mixed connective tissue variant","type":"related"}],"termid":"MONDO:0006368","xrefs":{"Monarch":{"xref_id":"0006368"}}}


id: PBO:0002422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside reductase large subunit Cdc22","termid":"PBO:0002422"}


id: PBO:0069562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 834, pseudogene","termid":"PBO:0069562"}


id: MONDO:0023153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of abdominal tuberculosis that is characterized by accumulation of fluid in the abdomen, a swollen abdomen, and slightly raised tubercles of 1–2 mm all over the peritoneum.","definition_xrefs":["doi:10.5772/intechopen.70417"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tuberculosis","termid":"MONDO:0018076"},{"relation_name":"is_a","term_name":"abdominal tuberculosis","termid":"MONDO:0000369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous ascites","secondary_identifiers":["NCIT:C27076","MEDGEN:78815","SCTID:4501007","icd11.foundation:1747509566","UMLS:C0275919"],"synonyms":[{"name":"tuberculous ascites","type":"exact"}],"termid":"MONDO:0023153","xrefs":{"Monarch":{"xref_id":"0023153"}}}


id: PBO:0068027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 332","termid":"PBO:0068027"}


id: PBO:0075740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP54 antisense RNA 1","termid":"PBO:0075740"}


id: FYPO:0008282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate (5-IP7) is lower than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular myo-inositol level","termid":"FYPO:0008280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular 5-IP7 level","termid":"FYPO:0008282"}


id: PBO:0066980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 283","termid":"PBO:0066980"}


id: PBO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucosidase I Gls1 (predicted)","termid":"PBO:0001947"}


id: PBO:0029208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_ubiquitination","termid":"PBO:0029208"}


id: PBO:0031506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_leptomycin_B","termid":"PBO:0031506"}


id: PBO:0055534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2970","termid":"PBO:0055534"}


id: GO:0005053
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89645],"is_not":false,"summary":null,"term":"GO:0005053"}]},"cv_name":"molecular_function","definition":"Binding to a type 2 peroxisome targeting signal, a nonapeptide with a broad consensus sequence of (R/K)-(L/V/I)-(XXXXX)-(H/Q)-(L/A/F).","definition_xrefs":["GOC:mah","PMID:11687502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"peroxisome matrix targeting signal-2 binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PEX7","type":"narrow"},{"name":"PTS2 binding","type":"exact"},{"name":"PTS2 receptor","type":"exact"},{"name":"peroxisomal targeting signal 2 (PTS2) binding","type":"exact"},{"name":"peroxisome targeting signal-2 binding","type":"exact"},{"name":"peroxisome targeting signal-2 receptor","type":"narrow"}],"termid":"GO:0005053","terms_by_termid":{"GO:0005053":null}}


id: GO:0072096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the frequency, rate or extent of branch elongation involved in ureteric bud branching, the growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072095"},{"relation_name":"negatively_regulates","term_name":"branch elongation involved in ureteric bud branching","termid":"GO:0060681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072096"}


id: PBO:0069531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 800, pseudogene","termid":"PBO:0069531"}


id: GO:0033867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein.","definition_xrefs":["EC:2.7.11.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016740","GO:0004672","GO:0016301"],"is_obsolete":false,"name":"Fas-activated serine/threonine kinase activity","secondary_identifiers":["MetaCyc:2.7.11.8-RXN"],"synonyms":[{"name":"ATP:Fas-activated serine/threonine protein phosphotransferase activity","type":"related"},{"name":"FAST","type":"related"},{"name":"FASTK","type":"related"},{"name":"STK10","type":"related"}],"termid":"GO:0033867"}


id: GO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing a cleistothecium, a closed sexual fruiting body that contains ascospores in linear asci. Cleistothecia are present in some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["PMID:30410052","PMID:20348388","PMID:28889020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium formation","termid":"GO:0062248"}


id: GO:0044836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic enzymatic conversion of D-xylose to ethanol, yielding energy in the form of ATP.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete D-xylose fermentation (obsolete GO:0044836)","termid":"GO:0044836"}


id: PR:Q9Y7P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1450.15 gene.","definition_xrefs":["UniProtKB:Q9Y7P2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1450.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.15","synonyms":[{"name":"Spom972h-SPCC1450.15","type":"exact"}],"termid":"PR:Q9Y7P2"}


id: MONDO:0007513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia with adrenal cyst","secondary_identifiers":["OMIM:129550","MEDGEN:342106","Orphanet:3391","MESH:C538015","UMLS:C1851850"],"synonyms":[{"name":"Odonto-onycho-hypohidrotic dysplasia-midline scalp defects syndrome","type":"exact"},{"name":"ectodermal dysplasia with adrenal cyst","type":"exact"}],"termid":"MONDO:0007513","xrefs":{"Monarch":{"xref_id":"0007513"}}}


id: MONDO:0020564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete well-differentiated liposarcoma (obsolete MONDO:0020564)","termid":"MONDO:0020564","xrefs":{"Monarch":{"xref_id":"0020564"}}}


id: GO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the microneme membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme lumen","termid":"GO:0034494"}


id: GO:1905765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protection from non-homologous end joining at telomere.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:14690602","GOC:BHF_telomere","GO_REF:0000058","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere capping","termid":"GO:1904354"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance in response to DNA damage","termid":"GO:1904506"},{"relation_name":"is_a","term_name":"regulation of protection from non-homologous end joining at telomere","termid":"GO:1905764"},{"relation_name":"negatively_regulates","term_name":"protection from non-homologous end joining at telomere","termid":"GO:0031848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protection from non-homologous end joining at telomere","synonyms":[{"name":"down regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"down-regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down-regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"downregulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"downregulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"inhibition of protection from NHEJ-mediated telomere fusion","type":"narrow"},{"name":"inhibition of protection from non-homologous end joining at telomere","type":"narrow"},{"name":"negative regulation of protection from NHEJ-mediated telomere fusion","type":"exact"}],"termid":"GO:1905765"}


id: PR:O13711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.04","synonyms":[{"name":"Spom972h-SPAC14C4.04","type":"exact"}],"termid":"PR:O13711"}


id: PBO:0091117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein of the mitochondrial intermembrane space Cmc1","termid":"PBO:0091117"}


id: GO:0051980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of the iron chelate iron-nicotianamine (Fe-NA) from one side of a membrane to the other.","definition_xrefs":["GOC:ai","PMID:20625001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"iron-nicotianamine transmembrane transporter activity","synonyms":[{"name":"Fe-NA chelate transporter activity","type":"exact"}],"termid":"GO:0051980"}


id: PR:P27584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpa1 gene.","definition_xrefs":["UniProtKB:P27584","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein alpha-1 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.06","synonyms":[{"name":"GP1-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpa1","type":"exact"}],"termid":"PR:P27584"}


id: PBO:0055553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2989","termid":"PBO:0055553"}


id: PBO:0004853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic glutaminyl-tRNA ligase Qrs1 (predicted)","termid":"PBO:0004853"}


id: PBO:0041490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 40","termid":"PBO:0041490"}


id: GO:0043219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Non-compact myelin located adjacent to the nodes of Ranvier in a myelin segment. These non-compact regions include cytoplasm from the cell responsible for synthesizing the myelin. Lateral loops are found in the paranodal region adjacent to the nodes of Ranvier, while Schmidt-Lantermann clefts are analogous structures found within the compact myelin internode.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral loop","secondary_identifiers":["NIF_Subcellular:sao1067215520","NIF_Subcellular:sao1354781919"],"synonyms":[{"name":"Schwann cell paranodal termination","type":"related"},{"name":"oligodendrocyte paranodal termination","type":"related"},{"name":"paranodal loop","type":"related"}],"termid":"GO:0043219"}


id: PBO:0079677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Z","termid":"PBO:0079677"}


id: PBO:0034223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-participates_in_a_abiotic-biotic_interaction_with","termid":"PBO:0034223"}


id: PBO:0051736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS6 antisense RNA 1","termid":"PBO:0051736"}


id: FYPO:0004869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Crb2 accumulates is lower than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:15226425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Crb2 foci during cellular response to ionizing radiation","synonyms":[{"name":"decreased number of Crb2 foci during cellular response to IR","type":"exact"},{"name":"decreased number of Crb2 foci during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased number of Crb2 foci during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced number of Crb2 foci during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004869"}


id: MONDO:0010166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulnar agenesis and endocardial fibroelastosis","secondary_identifiers":["MEDGEN:336387","MESH:C564756","OMIM:276822","UMLS:C1848649"],"synonyms":[{"name":"ulnar agenesis and endocardial fibroelastosis","type":"exact"}],"termid":"MONDO:0010166","xrefs":{"Monarch":{"xref_id":"0010166"}}}


id: FYPO:0005030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the leading strand during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:25664722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on leading strand","synonyms":[{"name":"increased rNMP incorporation on leading strand","type":"related"},{"name":"increased rNTP incorporation on leading strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on leading strand","type":"exact"}],"termid":"FYPO:0005030"}


id: MONDO:0009438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal hypouricemia","termid":"MONDO:0009071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypouricemia, hypercalcinuria, and decreased bone density","secondary_identifiers":["MESH:C565475","OMIM:242050","GARD:15186","UMLS:C1855793","MEDGEN:343419"],"synonyms":[{"name":"hypouricemia, hypercalcinuria, and decreased bone density","type":"exact"}],"termid":"MONDO:0009438","xrefs":{"Monarch":{"xref_id":"0009438"}}}


id: PBO:0048682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 1","termid":"PBO:0048682"}


id: internal:cv_version
data:
  {"annotation_feature_type":"gene","cv_name":"cv_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cv_version","termid":"internal:cv_version"}


id: PBO:0052351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 4A","termid":"PBO:0052351"}


id: FYPO:0003925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is decreased in regions where RNA polymerase II actively transcribes genes.","definition_xrefs":["PomBase:mah","PMID:22426534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic DNA replication elongation","termid":"FYPO:0003923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"decreased rate of mitotic DNA replication elongation at highly transcribed RNA polymerase II genes","synonyms":[{"name":"decreased rate of DNA replication elongation at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"decreased rate of DNA strand elongation at highly transcribed RNA polymerase II genes involved in mitotic DNA replication","type":"exact"},{"name":"decreased rate of DNA strand elongation at highly transcribed RNA polymerase II genes involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"decreased rate of mitotic DNA replication elongation at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"},{"name":"reduced rate of mitotic DNA replication elongation at highly transcribed RNA polymerase II genes","type":"exact"}],"termid":"FYPO:0003925"}


id: PR:P87053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof1 gene.","definition_xrefs":["UniProtKB:P87053","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat-containing protein pof1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.05c","synonyms":[{"name":"Spom972h-pof1","type":"exact"},{"name":"skp1-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87053"}


id: GO:1901149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to salicylic acid.","definition_xrefs":["PMID:22699612","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"salicylic acid binding","synonyms":[{"name":"salicylic acid receptor","type":"narrow"}],"termid":"GO:1901149"}


id: PR:O94336
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.03c gene.","definition_xrefs":["UniProtKB:O94336","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FCP1 homology domain-containing protein C1271.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.03c","synonyms":[{"name":"Spom972h-SPBC1271.03c","type":"exact"}],"termid":"PR:O94336"}


id: PBO:0017973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein involved in microtubule-based process Ber1 (predicted)","termid":"PBO:0017973"}


id: GO:0004845
data:
  {"annotated_genes":["SJAG_04354","SJAG_03708","SJAG_04709","SJAG_04713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86681,87663,91171,114052],"is_not":false,"summary":null,"term":"GO:0004845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil.","definition_xrefs":["RHEA:13017","EC:2.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"uracil phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00966","MetaCyc:URACIL-PRIBOSYLTRANS-RXN"],"synonyms":[{"name":"UMP diphosphorylase activity","type":"related"},{"name":"UMP pyrophosphorylase activity","type":"related"},{"name":"UMP:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"UMP:pyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"UPRTase activity","type":"related"},{"name":"uridine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"uridine monophosphate pyrophosphorylase activity","type":"related"},{"name":"uridylate pyrophosphorylase activity","type":"related"},{"name":"uridylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004845","terms_by_termid":{"GO:0004845":null}}


id: PBO:0048960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein V platelet","termid":"PBO:0048960"}


id: GO:0034929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxypyrene + O2 + 2 H+ + 2 e- = 1-hydroxypyrene-7,8-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxypyrene 7,8-monooxygenase activity (obsolete GO:0034929)","termid":"GO:0034929"}


id: PBO:0058330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4704","termid":"PBO:0058330"}


id: PBO:0042698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3B","termid":"PBO:0042698"}


id: PBO:0051970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"influenza virus NS1A binding protein","termid":"PBO:0051970"}


id: MONDO:0023540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kashani-Strom-Utley syndrome","secondary_identifiers":["MESH:C537010","UMLS:C2931392","MEDGEN:419069","Orphanet:1137"],"synonyms":[{"name":"Kashani Strom Utley syndrome","type":"related"},{"name":"hypoplastic pulmonary arteries and aorta with obstructive uropathy","type":"related"},{"name":"pulmonary aortic stenosis obstructive uropathy","type":"related"}],"termid":"MONDO:0023540","xrefs":{"Monarch":{"xref_id":"0023540"}}}


id: GO:0071603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an endothelial cell to another endothelial cell via adhesion molecules.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"endothelial cell-cell adhesion","termid":"GO:0071603"}


id: PBO:0005307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp13 (predicted)","termid":"PBO:0005307"}


id: MONDO:0011782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Small breaks in the elastin-filled tissue of the retina.","definition_xrefs":["MESH:D000793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"angioid streaks","secondary_identifiers":["MedDRA:10066191","DOID:13401","MEDGEN:1541","UMLS:C0002982","OMIM:607140","EFO:1000805"],"synonyms":[{"name":"angioid streaks","type":"exact"}],"termid":"MONDO:0011782","xrefs":{"Monarch":{"xref_id":"0011782"}}}


id: PBO:0036048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_mitotic_spindle_during_anaphase_B","termid":"PBO:0036048"}


id: MONDO:0023226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gershinibaruch Leibo syndrome","termid":"MONDO:0023226","xrefs":{"Monarch":{"xref_id":"0023226"}}}


id: MONDO:0019781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, and subependymal giant cell astrocytoma.","definition_xrefs":["NCIT:C60781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrocytoma (excluding glioblastoma)","secondary_identifiers":["UMLS:C0004114","MEDGEN:438","ICDO:9400/3","EFO:0000272","MESH:D001254","SCTID:147101000119108","ONCOTREE:ASTR"],"synonyms":[{"name":"astrocytoma","type":"exact"}],"termid":"MONDO:0019781","xrefs":{"Monarch":{"xref_id":"0019781"}}}


id: PBO:0059748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 22","termid":"PBO:0059748"}


id: GO:0052580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (-)-menthone + NADP+ = (+)-pulegone + NADPH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (+)-pulegone reductase, (-)-menthone as substrate, activity (obsolete GO:0052580)","termid":"GO:0052580"}


id: PBO:0111804
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP domain","termid":"PBO:0111804"}


id: PBO:0074847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 37","termid":"PBO:0074847"}


id: GO:0008530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an extracellular peptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete exogenous peptide receptor activity (obsolete GO:0008530)","synonyms":[{"name":"exogenous peptide receptor activity","type":"exact"}],"termid":"GO:0008530"}


id: SO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that changes the translational product with respect to the reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_change_of_translational_product_variant","synonyms":[{"name":"complex change of translational product variant","type":"exact"}],"termid":"SO:0001602"}


id: SO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant where the mutated gene product adversely affects the other (wild type) gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dominant_negative_variant","synonyms":[{"name":"dominant negative","type":"exact"},{"name":"dominant negative variant","type":"exact"}],"termid":"SO:0002052"}


id: PBO:0065399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMA3 antisense RNA 1","termid":"PBO:0065399"}


id: MONDO:0016159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic cerebellar ataxia","termid":"MONDO:0020047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Gemignani syndrome","secondary_identifiers":["GARD:2451","MEDGEN:444093","MESH:C537678","UMLS:C2931587","Orphanet:2074"],"synonyms":[{"name":"spinocerebellar ataxia associated amyotrophy of the hands and sensorineural deafness","type":"related"},{"name":"spinocerebellar ataxia-amyotrophy-deafness syndrome","type":"exact"}],"termid":"MONDO:0016159","xrefs":{"Monarch":{"xref_id":"0016159"}}}


id: MONDO:0007318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alagille (AGS) syndrome is variably characterized by chronic cholestasis due to paucity of intrahepatic bile ducts, peripheral pulmonary artery stenosis, vertebrae segmentation anomalies, characteristic facies, posterior embryotoxon/anterior segment abnormalities, pigmentary retinopathy, and dysplastic kidneys.","definition_xrefs":["Orphanet:52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005328","MONDO:0005267"],"is_obsolete":false,"name":"Alagille syndrome","secondary_identifiers":["NANDO:1200918","MESH:D016738","DOID:9245","icd11.foundation:1249656206","MedDRA:10053870","NANDO:2200931","NCIT:C35139","OMIMPS:118450","GARD:804","ICD9:759.89","NANDO:1200919","UMLS:C0085280","NORD:748","MEDGEN:39014","SCTID:31742004"],"synonyms":[{"name":"Alagille syndrome","type":"exact"},{"name":"Alagille-Watson syndrome","type":"exact"},{"name":"Arteriohepatic dysplasia","type":"exact"},{"name":"Cardiovertebral syndrome","type":"related"},{"name":"Hepatofacioneurocardiovertebral syndrome","type":"related"},{"name":"Watson Alagille syndrome","type":"related"},{"name":"Watson-Miller syndrome","type":"related"},{"name":"hepatic ductular hypoplasia","type":"related"},{"name":"paucity of interlobular bile ducts","type":"related"},{"name":"syndromic bile duct paucity","type":"exact"}],"termid":"MONDO:0007318","xrefs":{"Monarch":{"xref_id":"0007318"}}}


id: PBO:0085259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral peroxisomal membrane peroxin; required for the regulation of peroxisome size and maintenance, recruits GTPase Rho1p to peroxisomes, induced by oleate, interacts with Pex27p; PEX25 has a paralog, PEX27, that arose from the whole genome duplication","termid":"PBO:0085259"}


id: PBO:0054442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1839","termid":"PBO:0054442"}


id: GO:0052797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [X]-4-O-methyl-D-glucuronic acid + H2O = [X]-OH + methyl-D-glucuronic acid. This reaction is the hydrolysis of the ester linkage between 4-O-methyl-D-glucuronic acid (MeGlcA) and an alcohol (-OH) group attached to a molecule, denoted here as [X].","definition_xrefs":["PMID:16876163","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"4-O-methyl-glucuronoyl methylesterase activity","synonyms":[{"name":"glucuronoyl esterase activity","type":"broad"}],"termid":"GO:0052797"}


id: PBO:0087541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RAVE complex (Rav1p, Rav2p, Skp1p); the RAVE complex promotes assembly of the V-ATPase holoenzyme; required for transport between the early and late endosome/PVC and for localization of TGN membrane proteins; potential Cdc28p substrate","termid":"PBO:0087541"}


id: GO:0070596
data:
  {"annotated_genes":["SJAG_01028","SJAG_02278","SJAG_04236","SJAG_00424","SJAG_03057","SJAG_04666","SJAG_02916","SJAG_00610","SJAG_04184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88353,113512,116918,103347,108225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[94134,102028,91628,88647],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,3-alpha-glucan anabolism","type":"exact"},{"name":"1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"1,3-alpha-glucan formation","type":"exact"},{"name":"1,3-alpha-glucan synthesis","type":"exact"},{"name":"alpha-1,3 glucan anabolism","type":"exact"},{"name":"alpha-1,3 glucan biosynthesis","type":"exact"},{"name":"alpha-1,3 glucan biosynthetic process","type":"exact"},{"name":"alpha-1,3 glucan formation","type":"exact"},{"name":"alpha-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0070596","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: MONDO:0017265
data:
  {"annotated_genes":["SJAG_02085","SJAG_02842"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84502,84503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014010"}]},"cv_name":"mondo","definition":"Autosomal recessive form of inherited ichthyosis.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited non-syndromic ichthyosis (obsolete MONDO:0017262)","termid":"MONDO:0017262"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02085":null,"SJAG_02842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21106","NANDO:1200615","NANDO:2200991","DOID:0060655","OMIMPS:242300","MEDGEN:697564","UMLS:C1274215","icd11.foundation:430849255","Orphanet:281097"],"synonyms":[{"name":"ARCI","type":"exact"},{"name":"autosomal recessive inherited ichthyosis","type":"exact"},{"name":"ichthyosis, congenital, autosomal recessive","type":"exact"},{"name":"inherited ichthyosis, autosomal recessive","type":"exact"}],"termid":"MONDO:0017265","terms_by_termid":{"MONDO:0014010":null},"xrefs":{"Monarch":{"xref_id":"0017265"}}}


id: MONDO:0030914
data:
  {"annotated_genes":["SJAG_01900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84462],"is_not":false,"summary":null,"term":"MONDO:0030914"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Clark-Baraitser syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617752","Orphanet:600731","UMLS:C2931130","DOID:0080234","GARD:9994","MESH:C536208","OMIM:300602","MEDGEN:443983"],"synonyms":[{"name":"Baraitser syndrome","type":"related"},{"name":"Clark-Baraitser syndrome","type":"exact"},{"name":"MRD49","type":"exact"},{"name":"autosomal dominant intellectual disability 49","type":"related"},{"name":"autosomal dominant mental retardation 49","type":"related"},{"name":"intellectual disability, autosomal dominant 49","type":"exact"},{"name":"intellectual disability, tall stature, obesity, macrocephaly and typical facial features","type":"related"},{"name":"mental retardation, autosomal dominant 49","type":"related"},{"name":"mental retardation, tall stature, obesity, macrocephaly and typical facial features","type":"related"}],"termid":"MONDO:0030914","terms_by_termid":{"MONDO:0030914":null},"xrefs":{"Monarch":{"xref_id":"0030914"}}}


id: PBO:0072124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 1","termid":"PBO:0072124"}


id: MONDO:0850451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute biphenotypic leukemia that is characterized by blasts which express B-lymphoid and myeloid lineage markers but are negative for MLL translocation and t(9;22)(q34;q11.2) translocation.","definition_xrefs":["DOID:0081038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute biphenotypic leukemia","termid":"MONDO:0020322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"mixed phenotype acute leukemia, B/myeloid","secondary_identifiers":["MEDGEN:501146","UMLS:C3472616"],"termid":"MONDO:0850451","xrefs":{"Monarch":{"xref_id":"0850451"}}}


id: MONDO:0020244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified primitive or secondary maculopathy (obsolete MONDO:0020244)","secondary_identifiers":["Orphanet:98666"],"termid":"MONDO:0020244","xrefs":{"Monarch":{"xref_id":"0020244"}}}


id: PBO:0035977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_acetylation_during_vegetative_growth","termid":"PBO:0035977"}


id: MONDO:0004019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary endometrioid adenocarcinoma of the endometrium characterized by the presence of eosinophilic malignant glandular epithelial cells.","definition_xrefs":["NCIT:C27849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrium adenocarcinoma","termid":"MONDO:0005461"},{"relation_name":"is_a","term_name":"endometrial endometrioid adenocarcinoma","termid":"MONDO:0006192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oxyphilic endometrial endometrioid adenocarcinoma","secondary_identifiers":["MEDGEN:309527","UMLS:C1518768","DOID:6865"],"synonyms":[{"name":"oxyphilic endometrial endometrioid adenocarcinoma","type":"exact"}],"termid":"MONDO:0004019","xrefs":{"Monarch":{"xref_id":"0004019"}}}


id: PBO:0042741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein P","termid":"PBO:0042741"}


id: GO:0020005
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a symbiont-containing vacuole, derived from both the host and symbiont.","definition_xrefs":["GOC:jl","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"symbiont-containing vacuole","termid":"GO:0020003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"symbiont-containing vacuole membrane","synonyms":[{"name":"parasitophorous vacuolar membrane","type":"exact"}],"termid":"GO:0020005"}


id: GO:1990950
data:
  {"annotated_genes":["SJAG_00666","SJAG_04853","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99324,101472],"is_not":false,"summary":null,"term":"GO:1990950"},{"annotations":[94353],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis II.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiosis II metaphase/anaphase transition","type":"exact"},{"name":"second meiotic metaphase/anaphase transition","type":"related"}],"termid":"GO:1990950","terms_by_termid":{"GO:1905191":null,"GO:1990950":null}}


id: FYPO:0002423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that forms a septum but does not divide, and that has an abnormal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, septated cells with abnormal cell shape","synonyms":[{"name":"inviable after spore germination, septated undivided abnormally shaped cell","type":"exact"},{"name":"inviable after spore germination, undivided septated cells with abnormal cell shape","type":"exact"},{"name":"inviable following spore germination, without cell division, septated cells with abnormal cell shape","type":"exact"},{"name":"inviable germinated spore, without cell division, septated cells with abnormal cell shape","type":"exact"},{"name":"lethal after spore germination, without cell division, septated cells with abnormal cell shape","type":"exact"}],"termid":"FYPO:0002423"}


id: PR:Q10275
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mba1 gene.","definition_xrefs":["UniProtKB:Q10275","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.11","synonyms":[{"name":"Spom972h-mba1","type":"exact"}],"termid":"PR:Q10275"}


id: PBO:0060038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 26","termid":"PBO:0060038"}


id: PBO:0057271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 495","termid":"PBO:0057271"}


id: GO:0090048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription regulator activity (obsolete GO:0090048)","synonyms":[{"name":"negative regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090048"}


id: PBO:0001158
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zellweger syndrome","termid":"PBO:0001158"}


id: PBO:0050276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box containing 3","termid":"PBO:0050276"}


id: PBO:0063229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 12","termid":"PBO:0063229"}


id: PBO:0086760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; regulated by the metal-responsive Aft1p transcription factor; highly inducible in zinc-depleted conditions; localizes to the soluble fraction; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; YOR387C has a paralog, VEL1, that arose from a single-locus duplication","termid":"PBO:0086760"}


id: PBO:0074794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 12C","termid":"PBO:0074794"}


id: PBO:0063914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta","termid":"PBO:0063914"}


id: PBO:0062836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 2","termid":"PBO:0062836"}


id: PBO:0085793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; completely overlaps the verified gene SLM1; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; mRNA identified as translated by ribosome profiling data","termid":"PBO:0085793"}


id: MONDO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cranial nerve palsy that involves the trochlear nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"paralytic strabismus","termid":"MONDO:0001143"},{"relation_name":"is_a","term_name":"cranial nerve palsy","termid":"MONDO:0002782"},{"relation_name":"is_a","term_name":"trochlear nerve disorder","termid":"MONDO:0007002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fourth cranial nerve palsy","secondary_identifiers":["SCTID:20610004","DOID:10869","ICD9:378.53","UMLS:C0271375","MEDGEN:75746"],"synonyms":[{"name":"cranial nerve palsy of trochlear nerve","type":"exact"},{"name":"fourth nerve palsy","type":"exact"},{"name":"fourth or trochlear nerve palsy","type":"exact"},{"name":"trochlear nerve cranial nerve palsy","type":"exact"}],"termid":"MONDO:0001146","xrefs":{"Monarch":{"xref_id":"0001146"}}}


id: GO:0044720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the size of an imaginal disc-derived wing.","definition_xrefs":["PMID:21393605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived wing size","termid":"GO:0044719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of imaginal disc-derived wing size","termid":"GO:0044720"}


id: PBO:0081294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75C, pseudogene","termid":"PBO:0081294"}


id: PBO:0082643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of nuclear aminoacylation-dependent tRNA export pathway; cytoplasmic; interacts with nuclear pore component Nup116p; copurifies with tRNA export receptors Los1p and Msn5p, as well as eIF-1a; required for activation of RAN GTPase Gsp1p and dissociation of receptor-tRNA-Gsp1p export complex; recruits Rna1p from cytoplasm to NPC, facilitates Rna1p activation of Gsp1p GTPase activity by enabling Rna1p to gain access to Gsp1p-GTP bound to export receptor tRNA complex","termid":"PBO:0082643"}


id: PR:Q09712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi18 gene.","definition_xrefs":["UniProtKB:Q09712","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.05","synonyms":[{"name":"GPI mannosyltransferase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpi18","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09712"}


id: MOD:00079
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-methyl-L-asparagine.","definition_xrefs":["Unimod:34#N","PubMed:11875433","RESID:AA0070","OMSSA:75","PubMed:2356973","PubMed:3782095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated asparagine","termid":"MOD:00673"},{"relation_name":"is_a","term_name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N4-methyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-N4-methylbutanediamic acid","type":"exact"},{"name":"MOD_RES N4-methylasparagine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(gamma)-methylasparagine","type":"exact"},{"name":"N-methylasparagine","type":"exact"},{"name":"N4-methyl-L-asparagine","type":"exact"},{"name":"N4-methylated L-asparagine","type":"exact"},{"name":"N4Me1Asn","type":"exact"},{"name":"beta-aspartyl methylamide","type":"exact"},{"name":"beta-methylasparagine","type":"related"},{"name":"methyln","type":"exact"}],"termid":"MOD:00079"}


id: GO:0072068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the late distal convoluted tubule over time, from its formation to the mature structure. The late distal convoluted tubule contains DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"part_of","term_name":"distal convoluted tubule development","termid":"GO:0072025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"late distal convoluted tubule development","termid":"GO:0072068"}


id: MOD:00179
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamyl 5-glycerylphosphorylethanolamine.","definition_xrefs":["Unimod:396#E","PubMed:9662537","PubMed:2511205","PubMed:2569467","RESID:AA0170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamyl 5-glycerylphosphorylethanolamine","synonyms":[{"name":"(S)-2-amino-5-[2-([([2,3-dihydroxypropyl]oxy)(hydroxy)phosphoryl]oxy)ethyl]amino-5-oxopentanoic acid","type":"exact"},{"name":"5-L-glutamyl glycerylphosphorylethanolamine","type":"exact"},{"name":"5GlyceroPEtAGlu","type":"exact"},{"name":"GlycerylPE","type":"related"},{"name":"L-glutamyl 5-glycerophosphoethanolamine","type":"exact"},{"name":"L-glutamyl 5-glycerophosphorylethanolamine","type":"exact"},{"name":"L-glutamyl 5-glycerylphosphorylethanolamine","type":"exact"},{"name":"MOD_RES 5-glutamyl glycerylphosphorylethanolamine","type":"exact"},{"name":"glycerylphosphorylethanolamine","type":"related"}],"termid":"MOD:00179"}


id: MONDO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired or inherited coagulation disorder due to reduced levels and activity of factor XIII.","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor XIII deficiency","secondary_identifiers":["UMLS:C4316906","NANDO:2200681","MESH:D005177","MEDGEN:1385982"],"synonyms":[{"name":"FXIIID","type":"exact"}],"termid":"MONDO:0002241","xrefs":{"Monarch":{"xref_id":"0002241"}}}


id: GO:0052586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on other nitrogenous compounds as donors, with a quinone or similar compound as acceptor (obsolete GO:0052586)","termid":"GO:0052586"}


id: PBO:0071381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 4","termid":"PBO:0071381"}


id: MONDO:0006584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Jaundice that appears during the neonatal period. In the majority of cases, it appears in the first week of life and is classified as physiologic due to accelerated destruction of erythrocytes and liver immaturity. In a minority of cases it is classified as non-physiologic, appearing in the first twenty four hours after birth, and is associated with underlying diseases including hemolytic disorders, polycythemia, and cephalohematoma.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete neonatal jaundice (obsolete MONDO:0006584)","secondary_identifiers":["MESH:D007567","DOID:2383","ICD9:774.6","SCTID:387712008","ICD9:774.5"],"synonyms":[{"name":"neonatal hyperbilirubinemia","type":"exact"},{"name":"neonatal icterus","type":"exact"}],"termid":"MONDO:0006584","xrefs":{"Monarch":{"xref_id":"0006584"}}}


id: PBO:0084920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular tether on nuclear membrane; mediates contact by interacting with Tom70p on mitochondria; protein abundance is regulated by phosphatidylcholine, enabling coupling of phospholipid homeostasis with contact extent","termid":"PBO:0084920"}


id: FYPO:0001943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of microtubule binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"abnormal microtubule binding","termid":"FYPO:0001943"}


id: MONDO:0011814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Smith-McCort dysplasia in which the cause of the disease is a mutation in the DYM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Smith-McCort dysplasia","termid":"MONDO:0015799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Smith-McCort dysplasia 1","secondary_identifiers":["MEDGEN:854757","OMIM:607326","GARD:15411","UMLS:C3888088","DOID:0081270"],"synonyms":[{"name":"DYM Smith-McCort dysplasia","type":"exact"},{"name":"SMC","type":"related"},{"name":"SMITH-McCort dysplasia 1","type":"related"},{"name":"Smc1","type":"related"},{"name":"Smith-McCort dysplasia","type":"broad"},{"name":"Smith-McCort dysplasia 1","type":"exact"},{"name":"Smith-McCort dysplasia caused by mutation in DYM","type":"exact"},{"name":"Smith-McCort dysplasia type 1","type":"exact"}],"termid":"MONDO:0011814","xrefs":{"Monarch":{"xref_id":"0011814"}}}


id: PBO:0080399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS29 retromer complex component","termid":"PBO:0080399"}


id: PR:O59666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A copper-exporting P-type ATPase A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-transporting ATPase ccc2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.01","secondary_identifiers":["UniProtKB:O59666"],"synonyms":[{"name":"Cu(2+)-ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-copA","type":"exact"}],"termid":"PR:O59666"}


id: GO:0046533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of photoreceptor cell differentiation","secondary_identifiers":["GO:0045674"],"synonyms":[{"name":"down regulation of photoreceptor cell differentiation","type":"exact"},{"name":"down regulation of photoreceptor differentiation","type":"exact"},{"name":"down-regulation of photoreceptor cell differentiation","type":"exact"},{"name":"down-regulation of photoreceptor differentiation","type":"exact"},{"name":"downregulation of photoreceptor cell differentiation","type":"exact"},{"name":"downregulation of photoreceptor differentiation","type":"exact"},{"name":"inhibition of photoreceptor cell differentiation","type":"narrow"},{"name":"inhibition of photoreceptor differentiation","type":"narrow"},{"name":"negative regulation of photoreceptor differentiation","type":"exact"}],"termid":"GO:0046533"}


id: PBO:0034632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_arsenite_ion","termid":"PBO:0034632"}


id: GO:0106231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:H2O + N(6)-propanoyl-L-lysyl-[protein] + NAD+ = 3''-O-propanoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["PMID:30026585","GOC:sp","RHEA:23500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacylase activity","termid":"GO:0141218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0019213","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NAD-dependent protein-lysine depropionylase activity","termid":"GO:0106231"}


id: GO:1901793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(3-hydroxyphenyl)propanoate.","definition_xrefs":["GOC:TermGenie","PMID:10537203","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propanoate metabolic process","synonyms":[{"name":"3-(3-hydroxyphenyl)propanoate metabolism","type":"exact"}],"termid":"GO:1901793"}


id: PBO:0068051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 356","termid":"PBO:0068051"}


id: GO:0075039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hydrostatic pressure is increased within the symbiont appressorium to breach the cuticle of the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"appressorium maturation","termid":"GO:0075035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of turgor in appressorium","synonyms":[{"name":"establishment of turgor in symbiont appressorium on or near host","type":"exact"},{"name":"formation of turgor in appressorium","type":"exact"},{"name":"generation of turgor in appressorium","type":"exact"}],"termid":"GO:0075039"}


id: PBO:0088119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar cation channel; mediates release of Ca(2+) from the vacuole in response to hyperosmotic shock","termid":"PBO:0088119"}


id: PBO:0065927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 1","termid":"PBO:0065927"}


id: GO:0051761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sesquiterpenes, any of a class of terpenes of the formula C15H24 or a derivative of such a terpene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sesquiterpene metabolic process","synonyms":[{"name":"sesquiterpene metabolism","type":"exact"}],"termid":"GO:0051761"}


id: GO:1901051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of atropine. Atropine is the racemic mixture of hyoscyamine.","definition_xrefs":["GOC:TermGenie","PMID:33572199","GOC:yaf","PMID:2879005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"atropine biosynthetic process","secondary_identifiers":["GO:1901049"],"synonyms":[{"name":"atropine anabolism","type":"exact"},{"name":"atropine biosynthesis","type":"exact"},{"name":"atropine formation","type":"exact"},{"name":"atropine metabolic process","type":"broad"},{"name":"atropine metabolism","type":"broad"},{"name":"atropine synthesis","type":"exact"},{"name":"hyoscyamine biosynthetic process","type":"exact"}],"termid":"GO:1901051"}


id: SO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the H4 histone whereby multiple lysines are acylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acylation_region","termid":"SO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K_acylation_region","synonyms":[{"name":"H4K acylation region","type":"exact"},{"name":"H4KAc","type":"related"}],"termid":"SO:0001738"}


id: MONDO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal obstruction","termid":"MONDO:0002688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic duodenal ileus","secondary_identifiers":["UMLS:C0156087","icd11.foundation:379824638","ICD9:537.2","SCTID:52232007","DOID:13687","MEDGEN:510177"],"termid":"MONDO:0001775","xrefs":{"Monarch":{"xref_id":"0001775"}}}


id: GO:0033401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"UUU codon-amino acid adaptor activity","synonyms":[{"name":"TTT codon-amino acid adaptor activity","type":"exact"},{"name":"phenylalanine tRNA","type":"related"}],"termid":"GO:0033401"}


id: PBO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminase 2","termid":"PBO:0048722"}


id: PBO:0091149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase non-catalytic Sm-like domain subunit Naa38","termid":"PBO:0091149"}


id: PBO:0068913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 156, pseudogene","termid":"PBO:0068913"}


id: PBO:0079041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-3","termid":"PBO:0079041"}


id: GO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a sodium ion through a transmembrane aqueous pore or channel.","definition_xrefs":["ISBN:0815340729","GOC:BHF","GOC:pr","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium channel activity","secondary_identifiers":["Reactome:R-HSA-9717374","Reactome:R-HSA-9717382","Reactome:R-HSA-9717395","Reactome:R-HSA-2730664","Reactome:R-HSA-9717396","Reactome:R-HSA-3295580"],"termid":"GO:0005272"}


id: GO:0015957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.","definition_xrefs":["GOC:mah","PMID:10970777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"bis(5'-nucleosidyl) oligophosphate metabolic process","termid":"GO:0015956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"bis(5'-nucleosidyl) oligophosphate biosynthetic process","synonyms":[{"name":"bis(5'-nucleosidyl) oligophosphate anabolism","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate biosynthesis","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate formation","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate synthesis","type":"exact"}],"termid":"GO:0015957"}


id: PBO:0069615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 892, pseudogene","termid":"PBO:0069615"}


id: GO:0021991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of apical-basal elongation of individual ectodermal cells during the formation of the neural placode.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","PMID:15806586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"neural plate morphogenesis","termid":"GO:0001839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate thickening","termid":"GO:0021991"}


id: PBO:0070994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 18","termid":"PBO:0070994"}


id: MONDO:0005783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An accumulation of blood within the pericardial sac.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardial effusion","termid":"MONDO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hemopericardium","secondary_identifiers":["UMLS:C0019064","MEDGEN:6795","DOID:11482","EFO:0007298","ICD9:423.0","SCTID:23412002","HP:0011851"],"synonyms":[{"name":"haemopericardium","type":"exact"},{"name":"hemopericardium","type":"exact"},{"name":"hemopericardium (disease)","type":"exact"}],"termid":"MONDO:0005783","xrefs":{"Monarch":{"xref_id":"0005783"}}}


id: GO:0001228
data:
  {"annotated_genes":["SJAG_04249","SJAG_02218","SJAG_03241","SJAG_04036","SJAG_03346","SJAG_01916","SJAG_02406","SJAG_03538","SJAG_04749","SJAG_01694","SJAG_03484","SJAG_02311","SJAG_04388","SJAG_00210","SJAG_00802","SJAG_03519","SJAG_05288","SJAG_01243","SJAG_01583","SJAG_04712","SJAG_03735","SJAG_04009","SJAG_00266","SJAG_05153","SJAG_00698","SJAG_05247","SJAG_01062","SJAG_02252","SJAG_03143","SJAG_03183","SJAG_00693","SJAG_04092","SJAG_04855","SJAG_00987","SJAG_03879","SJAG_01307","SJAG_00163","SJAG_02730","SJAG_02810","SJAG_02472","SJAG_04813","SJAG_04839"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86810,87173,87244,87668,88003,88249,88673,89304,91115,91952,92496,92911,93940,94889,95482,96495,97307,97620,98697,99000,99684,101464,103622,103949,105004,105271,106214,106737,107134,107958,108200,108339,108340,108845,109868,111024,111063,111064,112815,113220,113716,115209,115607,116617,117191],"is_not":false,"summary":null,"term":"GO:0001228"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["PMID:27145859","GOC:txnOH-2018","GOC:aruk","PMID:20737563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity, RNA polymerase II-specific","termid":"GO:0000981"},{"relation_name":"is_a","term_name":"DNA-binding transcription activator activity","termid":"GO:0001216"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00802":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01916":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0001216"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0140110","GO:0003674","GO:0003700","GO:0001216"],"is_obsolete":false,"name":"DNA-binding transcription activator activity, RNA polymerase II-specific","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001211","Reactome:R-HSA-9856546","GO:0001212","GO:0001077","GO:0001205","GO:0001213","Reactome:R-HSA-9856548","Reactome:R-HSA-9856549","Reactome:R-HSA-9856604","GO:0001209","Reactome:R-HSA-9856539","Reactome:R-HSA-9856550"],"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"RNA polymerase II distal enhancer sequence-specific DNA-binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"exact"},{"name":"RNA polymerase II transcriptional activator activity, copper ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, metal ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, metal ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, zinc ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, zinc ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"distal enhancer DNA-binding transcription activator activity, RNA polymerase II-specific","type":"narrow"},{"name":"metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"proximal promoter DNA-binding transcription activator activity, RNA polymerase II-specific","type":"narrow"},{"name":"sequence-specific distal enhancer binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific DNA binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding","type":"exact"},{"name":"transcriptional activator activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"}],"termid":"GO:0001228","terms_by_termid":{"GO:0001228":null}}


id: MONDO:0024404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete meningitis caused by anaerobic bacteria (obsolete MONDO:0024404)","termid":"MONDO:0024404","xrefs":{"Monarch":{"xref_id":"0024404"}}}


id: GO:0102463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-3-gentiobioside + UDP-L-rhamnose = quercetin 3-O-gentiobioside-7-O-rhamnoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-gentiobioside 7-O-rhamnosyltransferase activity (obsolete GO:0102463)","termid":"GO:0102463"}


id: PBO:0070783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 13","termid":"PBO:0070783"}


id: MONDO:0007271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial cutaneous collagenoma is a connective tissue nevus characterized by multiple, flesh-colored asymptomatic nodules distributed symmetrically on the trunk and upper arms (mainly on the upper two-thirds of the back), manifesting around adolescence. The skin biopsy reveals an accumulation of collagen fibers with reduction in the number of elastic fibers. Cardiac anomalies may be observed. Familial cutaneous collagenoma follows an autosomal dominant mode of transmission.","definition_xrefs":["Orphanet:53296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial cutaneous collagenoma","secondary_identifiers":["icd11.foundation:982220551","MESH:C562925","MEDGEN:96073","OMIM:115250","UMLS:C0406817","SCTID:239139000","GARD:9799"],"synonyms":[{"name":"collagenoma, familial cutaneous","type":"related"}],"termid":"MONDO:0007271","xrefs":{"Monarch":{"xref_id":"0007271"}}}


id: PBO:0041365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 33","termid":"PBO:0041365"}


id: GO:0120271
data:
  {"annotated_genes":["SJAG_03883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88993],"is_not":false,"summary":null,"term":"GO:0120271"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selective degradation of meiosis-specific nuclear transcribed transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.","definition_xrefs":["GOC:krc","PMID:24920274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","termid":"GO:0120270"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"negatively_regulates","term_name":"nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","termid":"GO:0033621"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120271","terms_by_termid":{"GO:0120271":null}}


id: PBO:0016542
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human U2AF1","termid":"PBO:0016542"}


id: GO:1904404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formaldehyde stimulus.","definition_xrefs":["GOC:TermGenie","PMID:9149109","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to formaldehyde","termid":"GO:1904404"}


id: PR:O60146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- can1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C18H10.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.16","synonyms":[{"name":"Spom972h-can1","type":"exact"}],"termid":"PR:O60146"}


id: PBO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementation functionally complements E. coli PyrB","termid":"PBO:0034706"}


id: MOD:00468
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag light d0","synonyms":[{"name":"ESP","type":"related"},{"name":"ESP-Tag light d0","type":"related"}],"termid":"MOD:00468"}


id: PBO:0003194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase (predicted)","termid":"PBO:0003194"}


id: MONDO:0006070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute leukemia (obsolete MONDO:0006070)","termid":"MONDO:0006070","xrefs":{"Monarch":{"xref_id":"0006070"}}}


id: GO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the swim bladder over time, from its formation to the mature structure. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder development","synonyms":[{"name":"gas bladder development","type":"exact"}],"termid":"GO:0048794"}


id: PBO:0082783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; involved in the recognition and initial import steps for all mitochondrially directed proteins; acts as a receptor for incoming precursor proteins; TOM70 has a paralog, TOM71, that arose from the whole genome duplication","termid":"PBO:0082783"}


id: PBO:0082640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glycosylphosphatidylinositol-mannosyltransferase I; essential component; required for the autocatalytic post-translational processing of the protease B precursor Prb1p; localizes to ER in lumenal orientation; homolog of mammalian PIG-X","termid":"PBO:0082640"}


id: PBO:0079126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teashirt zinc finger homeobox 2","termid":"PBO:0079126"}


id: PBO:0073735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 3","termid":"PBO:0073735"}


id: SO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary between an intron and an exon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_junction","synonyms":[{"name":"splice boundary","type":"exact"},{"name":"splice junction","type":"exact"}],"termid":"SO:0001421"}


id: MONDO:0015777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hypothyroidism that occurs in an adult.","definition_xrefs":["MONDO:patterns/adult"],"gene_count":0,"genotype_count":0,"name":"obsolete adult hypothyroidism (obsolete MONDO:0015777)","secondary_identifiers":["Orphanet:177101"],"synonyms":[{"name":"rare adult hypothyroidism","type":"exact"}],"termid":"MONDO:0015777","xrefs":{"Monarch":{"xref_id":"0015777"}}}


id: PBO:0112562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-demethoxyubiquinol 3-hydroxylase Coq7","termid":"PBO:0112562"}


id: MONDO:0005945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granulomatous disease caused by klebsiella rhinoscleromatis infection. Despite its name, this disease is not limited to the nose and nasopharynx but may affect any part of the respiratory tract, sometimes with extension to the lip and the skin.","definition_xrefs":["MESH:D012226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Klebsiella infectious disease","termid":"MONDO:0030603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhinoscleroma","secondary_identifiers":["DOID:11336","UMLS:C0035468","EFO:0007470","ICD9:040.1","MEDGEN:20569","SCTID:72409005","icd11.foundation:1053615368"],"termid":"MONDO:0005945","xrefs":{"Monarch":{"xref_id":"0005945"}}}


id: GO:1904775
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88398],"is_not":false,"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquinone biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:8125303","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of ubiquinone biosynthetic process","termid":"GO:0010795"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006744"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006744"}],"interesting_parent_ids":["GO:0008150","GO:0006744","GO:0044281"],"is_obsolete":false,"name":"positive regulation of ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of coenzyme Q biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"activation of ubiquinone anabolism","type":"narrow"},{"name":"activation of ubiquinone biosynthesis","type":"narrow"},{"name":"activation of ubiquinone biosynthetic process","type":"narrow"},{"name":"activation of ubiquinone formation","type":"narrow"},{"name":"activation of ubiquinone synthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"positive regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"positive regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"positive regulation of ubiquinone anabolism","type":"exact"},{"name":"positive regulation of ubiquinone biosynthesis","type":"exact"},{"name":"positive regulation of ubiquinone formation","type":"exact"},{"name":"positive regulation of ubiquinone synthesis","type":"exact"},{"name":"up regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"up regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"up regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"up regulation of ubiquinone anabolism","type":"exact"},{"name":"up regulation of ubiquinone biosynthesis","type":"exact"},{"name":"up regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"up regulation of ubiquinone formation","type":"exact"},{"name":"up regulation of ubiquinone synthesis","type":"exact"},{"name":"up-regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"up-regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"up-regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"up-regulation of ubiquinone anabolism","type":"exact"},{"name":"up-regulation of ubiquinone biosynthesis","type":"exact"},{"name":"up-regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"up-regulation of ubiquinone formation","type":"exact"},{"name":"up-regulation of ubiquinone synthesis","type":"exact"},{"name":"upregulation of coenzyme Q biosynthesis","type":"exact"},{"name":"upregulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"upregulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"upregulation of ubiquinone anabolism","type":"exact"},{"name":"upregulation of ubiquinone biosynthesis","type":"exact"},{"name":"upregulation of ubiquinone biosynthetic process","type":"exact"},{"name":"upregulation of ubiquinone formation","type":"exact"},{"name":"upregulation of ubiquinone synthesis","type":"exact"}],"termid":"GO:1904775","terms_by_termid":{"GO:1904775":null}}


id: FYPO:0001370
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04349:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04349","name":"vps28delta","uniquename":"SJAG_04349:allele-1"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_04912:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04912","name":"vps25delta","uniquename":"SJAG_04912:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[118450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[118387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"},{"annotations":[118452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[118448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[118383,118384],"is_not":false,"summary":null,"term":"FYPO:0001370"},{"annotations":[118372,118374,118373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001440"},{"annotations":[118386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004718"},{"annotations":[118470,118471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[118352,118378,118375,118351,118381,118382,118379,118358,118362,118361,118359,118377,118380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[118444,118498,118497,118500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[118637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001375"},{"annotations":[118442,118453,118441,118449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[118355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"},{"annotations":[118499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"},{"annotations":[118354],"is_not":false,"rel_names":["is_a","output_of"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is abnormal. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"protein localization phenotype","termid":"FYPO:0002333"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01050":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03250":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04280":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04912":null,"SJAG_05207":null},"genotype_count":18,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]},"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps25delta":{"display_name":"vps25delta","display_uniquename":"vps25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04912:allele-1","expression":"Null"}]}]},"vps28delta":{"display_name":"vps28delta","display_uniquename":"vps28delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04349:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_05207","SJAG_01143","SJAG_01050","SJAG_02392","SJAG_03892","SJAG_03596"],"name":"abnormal protein localization","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_05207","SJAG_01745","SJAG_03250","SJAG_03783","SJAG_04912","SJAG_01143","SJAG_01050","SJAG_03892","SJAG_04280","SJAG_04349","SJAG_02392","SJAG_04489"],"single_locus_genotype_uniquenames":["lem2delta","did4delta","vps24delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","nur1delta","cmp7delta","vps25delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta","pom1delta","vps28delta","vps4delta"],"synonyms":[{"name":"abnormal cellular protein localisation","type":"exact"},{"name":"abnormal cellular protein localization","type":"exact"},{"name":"abnormal protein localisation","type":"exact"},{"name":"protein/peptide distribution: abnormal","type":"related"}],"termid":"FYPO:0001370","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000731":null,"FYPO:0001132":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001440":null,"FYPO:0002870":null,"FYPO:0003657":null,"FYPO:0003946":null,"FYPO:0004718":null,"FYPO:0005503":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"GO:0000815":null}}


id: MONDO:0003393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the thymus. Representative examples include thymic hyperplasia, thymoma, and thymic carcinoma.","definition_xrefs":["NCIT:C26962"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lymphatic system disorder","termid":"MONDO:0005833"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymus gland disorder","secondary_identifiers":["ICD9:254","ICD9:254.9","MEDGEN:57585","SCTID:20673009","UMLS:C0154199","DOID:533"],"synonyms":[{"name":"Thymus disorder","type":"exact"},{"name":"disease of thymus","type":"exact"},{"name":"disease of thymus gland","type":"exact"},{"name":"disease or disorder of thymus","type":"exact"},{"name":"disorder of thymus","type":"exact"},{"name":"disorder of thymus gland","type":"exact"},{"name":"thymus disease","type":"exact"},{"name":"thymus disease or disorder","type":"exact"},{"name":"thymus disorder","type":"related"}],"termid":"MONDO:0003393","xrefs":{"Monarch":{"xref_id":"0003393"}}}


id: GO:0075068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring in its host's vascular tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host vascular tissue (obsolete GO:0075068)","synonyms":[{"name":"growth or development of symbiont in host vascular tissue","type":"exact"}],"termid":"GO:0075068"}


id: MONDO:0001349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dental caries","termid":"MONDO:0005276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontoclasia","secondary_identifiers":["ICD9:521.05","UMLS:C0341004","DOID:11736","icd11.foundation:43527109","SCTID:196305005","MEDGEN:574111"],"termid":"MONDO:0001349","xrefs":{"Monarch":{"xref_id":"0001349"}}}


id: PBO:0057581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 885","termid":"PBO:0057581"}


id: PBO:0013747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor Sif3 (predicted)","termid":"PBO:0013747"}


id: PBO:0040717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF chromatin remodeling complex subunit BCL7C","termid":"PBO:0040717"}


id: GO:0030537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior in a larval form of an organism, an immature organism that must undergo metamorphosis to assume adult characteristics.","definition_xrefs":["ISBN:0877797099","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval behavior","secondary_identifiers":["GO:0017037"],"synonyms":[{"name":"larval behaviour","type":"exact"}],"termid":"GO:0030537"}


id: GO:0033344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cholesterol efflux","synonyms":[{"name":"cholesterol export","type":"exact"}],"termid":"GO:0033344"}


id: PBO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 2","termid":"PBO:0070408"}


id: SO:0001244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin structure.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre_miRNA","synonyms":[{"name":"pre-miRNA","type":"exact"}],"termid":"SO:0001244"}


id: MONDO:0037398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pulmonary disease characterized by primary or nonbacteremic pneumonia most frequently arising in an intensive care setting, or bacteremic pneumonia, which is typically associated with neutropenia. Chronic lower respiratory tract infection with development of episodes of pneumonia is common in patients with cystic fibrosis. Acute infections are potentially life-threatening. Patients present with fever, chills, dyspnea, cyanosis, productive cough, as well as signs of severe systemic toxicity. Alveolar hemorrhage, necrosis, and, eventually, cavity formation, are commonly seen.","definition_xrefs":["Orphanet:90066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"Pseudomonas aeruginosa infectious disease","termid":"MONDO:0040732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia caused by pseudomonas aeruginosa infection","secondary_identifiers":["icd11.foundation:801706385","MEDGEN:852026","UMLS:C0920182","GARD:13613"],"termid":"MONDO:0037398","xrefs":{"Monarch":{"xref_id":"0037398"}}}


id: GO:2001260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of semaphorin-plexin signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of semaphorin-plexin signaling pathway","synonyms":[{"name":"regulation of semaphorin-plexin signalling pathway","type":"exact"}],"termid":"GO:2001260"}


id: MONDO:0043458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Harmful effects of non-experimental exposure to ionizing or non-ionizing radiation in VERTEBRATES.","definition_xrefs":["MESH:D011832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation injury","synonyms":[{"name":"Injuries, radiation","type":"related"},{"name":"Sicknesses, radiation","type":"related"},{"name":"injury, radiation","type":"related"},{"name":"radiation Sicknesses","type":"related"},{"name":"radiation injury","type":"exact"},{"name":"radiation sickness","type":"related"},{"name":"radiation syndrome","type":"related"},{"name":"radiation syndromes","type":"related"},{"name":"sickness, radiation","type":"related"},{"name":"syndrome, radiation","type":"related"},{"name":"syndromes, radiation","type":"related"}],"termid":"MONDO:0043458","xrefs":{"Monarch":{"xref_id":"0043458"}}}


id: PBO:0042675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 9","termid":"PBO:0042675"}


id: MONDO:0006044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hardening of the kidney due to infiltration by fibrous connective tissue (fibrosis), usually caused by renovascular diseases or chronic hypertension. Nephrosclerosis leads to renal ischemia.","definition_xrefs":["MESH:D009400"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"renal hypertension","termid":"MONDO:0001105"},{"relation_name":"is_a","term_name":"renal artery disease","termid":"MONDO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrosclerosis","secondary_identifiers":["MEDGEN:14330","icd11.foundation:1878591797","ICD9:587","UMLS:C0027719","DOID:11664","EFO:1000041","SCTID:32916005"],"synonyms":[{"name":"renal sclerosis","type":"exact"}],"termid":"MONDO:0006044","xrefs":{"Monarch":{"xref_id":"0006044"}}}


id: GO:1900413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of phospholipid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mah","PMID:16537923"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900413)","synonyms":[{"name":"positive regulation of phospholipid biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phospholipid synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900413"}


id: GO:0050323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + taurine = AH(2) + NH4 + sulfoacetaldehyde.","definition_xrefs":["RHEA:18709","PMID:15073291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"taurine dehydrogenase activity","secondary_identifiers":["EC:1.4.99.2","KEGG_REACTION:R07167","MetaCyc:TAURINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"taurine:(acceptor) oxidoreductase (deaminating)","type":"related"},{"name":"taurine:acceptor oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0050323"}


id: MONDO:0013896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the TCTN3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 18","secondary_identifiers":["OMIM:614815","GARD:15843","UMLS:C3553758","DOID:0110987","MEDGEN:766672"],"synonyms":[{"name":"JBTS18","type":"exact"},{"name":"Joubert syndrome 18","type":"exact"},{"name":"Joubert syndrome caused by mutation in TCTN3","type":"exact"},{"name":"Joubert syndrome type 18","type":"exact"},{"name":"TCTN3 Joubert syndrome","type":"exact"}],"termid":"MONDO:0013896","xrefs":{"Monarch":{"xref_id":"0013896"}}}


id: PBO:0017549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FaScilin domain Containing","termid":"PBO:0017549"}


id: MONDO:1011720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subclinical hypocalcemia, non-human animal","secondary_identifiers":["OMIA:002048"],"termid":"MONDO:1011720","xrefs":{"Monarch":{"xref_id":"1011720"}}}


id: MONDO:0005107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatocellular adenoma (obsolete MONDO:0005107)","termid":"MONDO:0005107","xrefs":{"Monarch":{"xref_id":"0005107"}}}


id: PBO:0059279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37 pseudogene 1","termid":"PBO:0059279"}


id: PBO:0029548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_meiosis_gene_mRNA_during_vegetative_growth","termid":"PBO:0029548"}


id: MONDO:1011357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Serositis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serositis, non-human animal","termid":"MONDO:1011357","xrefs":{"Monarch":{"xref_id":"1011357"}}}


id: MONDO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, 5","secondary_identifiers":["UMLS:C5394542","DOID:0070368","GARD:16395","MEDGEN:1710326","OMIM:618935"],"synonyms":[{"name":"CGD5","type":"exact"},{"name":"GRANULOMATOUS DISEASE, CHRONIC, AUTOSOMAL RECESSIVE, 5","type":"exact"},{"name":"Granulomatous Disease, Chronic, Due to Cybc1 Deficiency","type":"exact"},{"name":"chronic granulomatous disease 5, autosomal recessive","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, 5","type":"exact"}],"termid":"MONDO:0030066","xrefs":{"Monarch":{"xref_id":"0030066"}}}


id: GO:1905794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a puromycin stimulus.","definition_xrefs":["PMID:25736288","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to puromycin","synonyms":[{"name":"response to 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine","type":"exact"}],"termid":"GO:1905794"}


id: GO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A projection from a cell or tissue that penetrates the host's cell wall and invaginates the host cell membrane.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"haustorium","termid":"GO:0085035"}


id: MONDO:0012307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial scaphocephaly syndrome, McGillivray type is a rare newly described craniosynostosis syndrome characterized by scaphocephaly, macrocephaly, severe maxillary retrusion, and mild intellectual disability.","definition_xrefs":["Orphanet:168624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial scaphocephaly syndrome","termid":"MONDO:0015704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"familial scaphocephaly syndrome, McGillivray type","secondary_identifiers":["icd11.foundation:512057922","GARD:3426","OMIM:609579","MEDGEN:355365","MESH:C566511","UMLS:C1865070"],"synonyms":[{"name":"scaphocephaly, maxillary retrusion, and intellectual disability","type":"related"},{"name":"scaphocephaly, maxillary retrusion, and mental retardation","type":"related"},{"name":"scaphocephaly-macrocephaly-maxillary retrusion-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0012307","xrefs":{"Monarch":{"xref_id":"0012307"}}}


id: PBO:0061877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1 pseudogene 1","termid":"PBO:0061877"}


id: MONDO:0017199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoporosis-macrocephaly-blindness-joint hyperlaxity syndrome is characterized by osteoporosis, macrocephalus, brachytelephalangy, and hyperextensibility of the joints. Congenital amaurosis and intellectual deficit have also been reported. This syndrome has been described in three members of one family.","definition_xrefs":["Orphanet:2787"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoporosis-macrocephaly-blindness-joint hyperlaxity syndrome","secondary_identifiers":["SCTID:716189005","GARD:18778","MEDGEN:899606","UMLS:C4274786"],"synonyms":[{"name":"Heide syndrome","type":"exact"}],"termid":"MONDO:0017199","xrefs":{"Monarch":{"xref_id":"0017199"}}}


id: PR:O94587
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protein COX18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12428:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein cox18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.15c","secondary_identifiers":["UniProtKB:O94587"],"synonyms":[{"name":"SPCC1442.15c","type":"related"},{"name":"Sp3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COX18","type":"exact"},{"name":"cox18sp+ (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oxa1-3","type":"related"},{"name":"oxa103","type":"related"}],"termid":"PR:O94587"}


id: PBO:0109620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 14 pseudogene","termid":"PBO:0109620"}


id: PBO:0030380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cadmium","termid":"PBO:0030380"}


id: PBO:0088785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA biosynthesis protein","termid":"PBO:0088785"}


id: PBO:0061834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 2","termid":"PBO:0061834"}


id: PBO:0079451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUSC2 pseudogene 1","termid":"PBO:0079451"}


id: GO:0051199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a prosthetic group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of prosthetic group metabolic process (obsolete GO:0051199)","synonyms":[{"name":"regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"regulation of prosthetic group metabolism","type":"exact"}],"termid":"GO:0051199"}


id: PBO:0061355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 13","termid":"PBO:0061355"}


id: GO:0019380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-phenylpropionate, the anion of phenylpropanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-phenylpropionate metabolic process","termid":"GO:0018962"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-phenylpropionate catabolic process","secondary_identifiers":["MetaCyc:P281-PWY"],"synonyms":[{"name":"3-phenylpropionate breakdown","type":"exact"},{"name":"3-phenylpropionate catabolism","type":"exact"},{"name":"3-phenylpropionate degradation","type":"exact"}],"termid":"GO:0019380"}


id: MONDO:0012279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital muscular dystrophy merosin-positive (obsolete MONDO:0012279)","termid":"MONDO:0012279","xrefs":{"Monarch":{"xref_id":"0012279"}}}


id: GO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the blood vessels of the heart over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vasculature development","synonyms":[{"name":"cardiac blood vessel development","type":"exact"},{"name":"cardiac vasculature development","type":"exact"},{"name":"coronary blood vessel development","type":"exact"},{"name":"heart blood vessel development","type":"exact"},{"name":"heart vasculature development","type":"exact"}],"termid":"GO:0060976"}


id: PATO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a process by virtue of that process having two or more organisms as participants.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-organismal process quality","termid":"PATO:0002486"}


id: GO:0072683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a T cell from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000084","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell extravasation","synonyms":[{"name":"T lymphocyte extravasation","type":"exact"},{"name":"T-cell extravasation","type":"exact"},{"name":"T-lymphocyte extravasation","type":"exact"}],"termid":"GO:0072683"}


id: MONDO:0041448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant colon neoplasm","termid":"MONDO:0021063"},{"relation_name":"is_a","term_name":"metastatic malignant neoplasm","termid":"MONDO:0024880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"metastasis from malignant tumor of colon","secondary_identifiers":["MEDGEN:705366","SCTID:314998002","UMLS:C1282500"],"synonyms":[{"name":"metastasis from malignant tumor of colon","type":"exact"}],"termid":"MONDO:0041448","xrefs":{"Monarch":{"xref_id":"0041448"}}}


id: PBO:0072959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec1 family domain containing 1","termid":"PBO:0072959"}


id: PR:O13737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16E8.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized endoplasmic reticulum membrane protein C16E8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.02","synonyms":[{"name":"Spom972h-SPAC16E8.02","type":"exact"}],"termid":"PR:O13737"}


id: PBO:0046628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 9","termid":"PBO:0046628"}


id: GO:0010650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:tb","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"positively_regulates","term_name":"cell communication by electrical coupling","termid":"GO:0010644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication by electrical coupling","termid":"GO:0010650"}


id: MONDO:0012625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the NR2E3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 37","secondary_identifiers":["MESH:C567005","DOID:0110399","GARD:15508","OMIM:611131","UMLS:C1970163","ICD10CM:H35.5","MEDGEN:410004"],"synonyms":[{"name":"NR2E3 retinitis pigmentosa","type":"exact"},{"name":"RP37","type":"exact"},{"name":"retinitis pigmentosa 37","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in NR2E3","type":"exact"},{"name":"retinitis pigmentosa type 37","type":"exact"}],"termid":"MONDO:0012625","xrefs":{"Monarch":{"xref_id":"0012625"}}}


id: PBO:0015272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shuttle craft like transcriptional regulator/ ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0015272"}


id: GO:0018890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanamide, NCNH2, a cyanide compound which has been used as a fertilizer, defoliant and in many manufacturing processes. It often occurs as the calcium salt, sometimes also referred to as cyanamide. The citrated calcium salt is used in the treatment of alcoholism.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanamide metabolic process","secondary_identifiers":["UM-BBD_pathwayID:cnm"],"synonyms":[{"name":"cyanamide metabolism","type":"exact"}],"termid":"GO:0018890"}


id: GO:2001114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to hepatocyte growth factor stimulus","termid":"GO:2001112"},{"relation_name":"positively_regulates","term_name":"cellular response to hepatocyte growth factor stimulus","termid":"GO:0035729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"positive regulation of cellular response to HGF stimulus","type":"exact"}],"termid":"GO:2001114"}


id: GO:0045221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of FasL.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of FasL production","termid":"GO:0045219"},{"relation_name":"negatively_regulates","term_name":"FasL biosynthetic process","termid":"GO:0045210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of FasL production","synonyms":[{"name":"down regulation of FasL biosynthetic process","type":"exact"},{"name":"down-regulation of FasL biosynthetic process","type":"exact"},{"name":"downregulation of FasL biosynthetic process","type":"exact"},{"name":"inhibition of FasL biosynthetic process","type":"narrow"},{"name":"negative regulation of FasL anabolism","type":"exact"},{"name":"negative regulation of FasL biosynthesis","type":"exact"},{"name":"negative regulation of FasL biosynthetic process","type":"exact"},{"name":"negative regulation of FasL formation","type":"exact"},{"name":"negative regulation of FasL synthesis","type":"exact"}],"termid":"GO:0045221"}


id: PBO:0059316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L55","termid":"PBO:0059316"}


id: PATO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000184 arousal (obsolete PATO:0000184)","termid":"PATO:0000184"}


id: PBO:0108605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_characteristic","termid":"PBO:0108605"}


id: MONDO:0007502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear pits, posterior helical","secondary_identifiers":["OMIM:128710","UMLS:C1851900","MEDGEN:342119"],"synonyms":[{"name":"ear pits, posterior helical","type":"exact"},{"name":"earlobe Indentations, posterior","type":"related"},{"name":"posterior helical Ear pits","type":"related"}],"termid":"MONDO:0007502","xrefs":{"Monarch":{"xref_id":"0007502"}}}


id: PBO:0026904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body","termid":"PBO:0026904"}


id: PBO:0084124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heterotrimeric nascent polypeptide-associated complex beta3 subunit; complex binds ribosomes via its beta-subunits in close proximity to nascent polypeptides; interacts with Caf130p of the CCR4-NOT complex; similar to human BTF3; BTT1 has a paralog, EGD1, that arose from the whole genome duplication","termid":"PBO:0084124"}


id: MOD:02046
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-glutamine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-glutamine residue","synonyms":[{"name":"XlnkGln","type":"exact"}],"termid":"MOD:02046"}


id: PBO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc11","termid":"PBO:0001087"}


id: GO:0004162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a methyl group from N-nitrosodimethylamine.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylnitrosamine demethylase activity (obsolete GO:0004162)","synonyms":[{"name":"N-nitrosodimethylamine demethylase activity","type":"exact"}],"termid":"GO:0004162"}


id: GO:0042626
data:
  {"annotated_genes":["SJAG_00212","SJAG_05294","SJAG_01447","SJAG_01435","SJAG_01817","SJAG_04757","SJAG_01471","SJAG_01879","SJAG_03502","SJAG_02023","SJAG_02399","SJAG_01400","SJAG_02077","SJAG_03850","SJAG_01344","SJAG_01397","SJAG_03406","SJAG_01129","SJAG_01913","SJAG_04277","SJAG_02602","SJAG_00373","SJAG_03358","SJAG_05213","SJAG_03785","SJAG_03415","SJAG_02782","SJAG_02457","SJAG_01597","SJAG_04258","SJAG_03363","SJAG_03866","SJAG_03497","SJAG_01669","SJAG_03515","SJAG_00516","SJAG_04955","SJAG_04015","SJAG_03560","SJAG_00136","SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117333],"is_not":false,"summary":null,"term":"GO:0042626"},{"annotations":[88483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140481"},{"annotations":[107820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[106347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[96249,117330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[111482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[100777,100064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140359"},{"annotations":[95268,117079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"},{"annotations":[100206,94653,114222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[100818,107824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[107014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[100208,114223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015662"},{"annotations":[107015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[111485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008556"},{"annotations":[111486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[112905,86916,86917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[111487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[94654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140358"},{"annotations":[102461,90104,110943,98738,106750,104351,106729,96081,99507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"},{"annotations":[89371,89055,95814,99203,101856,109026,117854,94851,100824,103088,98115,91254,99133,87251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Primary active transporter of a solute across a membrane, via the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of a substance across a membrane. The transport protein may be transiently phosphorylated (P-type transporters), or not (ABC-type transporters and other families of transporters). Primary active transport occurs up the solute's concentration gradient and is driven by a primary energy source.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00373":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01344":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01597":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01879":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02077":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02602":null,"SJAG_02782":null,"SJAG_03358":null,"SJAG_03363":null,"SJAG_03406":null,"SJAG_03415":null,"SJAG_03497":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03785":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04015":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04277":null,"SJAG_04757":null,"SJAG_04955":null,"SJAG_05213":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9753278","Reactome:R-HSA-1467457","Reactome:R-HSA-9750546","Reactome:R-HSA-9794572","Reactome:R-HSA-9033505","EC:7.2.2.-","Reactome:R-HSA-2161506","Reactome:R-HSA-390393","Reactome:R-HSA-9033499","Reactome:R-HSA-2161538","Reactome:R-HSA-9753283","Reactome:R-HSA-9659680","Reactome:R-HSA-9759454","GO:0016820","GO:0043492","Reactome:R-HSA-9794120","GO:0015405","Reactome:R-HSA-9750617","Reactome:R-HSA-9759461","Reactome:R-HSA-9753284"],"synonyms":[{"name":"ATP-coupled transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent transmembrane transporter activity","type":"exact"},{"name":"ATPase activity, coupled to movement of substances","type":"broad"},{"name":"ATPase activity, coupled to transmembrane movement of substances","type":"exact"},{"name":"P-P-bond-hydrolysis-driven transmembrane transporter activity","type":"broad"},{"name":"P-P-bond-hydrolysis-driven transporter","type":"broad"},{"name":"hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances","type":"narrow"}],"termid":"GO:0042626","terms_by_termid":{"GO:0005388":null,"GO:0008553":null,"GO:0008554":null,"GO:0008556":null,"GO:0008559":null,"GO:0008900":null,"GO:0015410":null,"GO:0015421":null,"GO:0015450":null,"GO:0015662":null,"GO:0019829":null,"GO:0042626":null,"GO:0043682":null,"GO:0044604":null,"GO:0046961":null,"GO:0140358":null,"GO:0140359":null,"GO:0140481":null,"GO:0140581":null,"GO:0140679":null}}


id: PBO:0077905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosylprotein sulfotransferase 1","termid":"PBO:0077905"}


id: GO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete barbed-end actin capping/severing activity (obsolete GO:0003784)","synonyms":[{"name":"barbed-end actin capping/severing activity","type":"exact"}],"termid":"GO:0003784"}


id: PBO:0054546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1946","termid":"PBO:0054546"}


id: PBO:0082273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AN1-type zinc finger protein, effector of proteotoxic stress response; stress-inducible transcriptional target of Rpn4p; induced by nitrogen limitation, weak acid, misfolded proteins; short-lived protein, degraded by proteasome; may protect cells from trivalent metalloid induced proteotoxicity; contains PACE promoter element; ortholog of human AIRAP, which stimulates proteasome activity in response to arsenic; protein abundance increases under DNA replication stress","termid":"PBO:0082273"}


id: PBO:0073036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 1","termid":"PBO:0073036"}


id: PBO:0092037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamic acid (uuc), mitochondrial","termid":"PBO:0092037"}


id: PBO:0049802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin receptor 1","termid":"PBO:0049802"}


id: PBO:0116221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolyzing), Oxp1","termid":"PBO:0116221"}


id: PBO:0030130
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_potassium_level","termid":"PBO:0030130"}


id: PBO:0071948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS4Y1 pseudogene 1","termid":"PBO:0071948"}


id: PBO:0088773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk8","termid":"PBO:0088773"}


id: GO:2000634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of miRNA processing","termid":"GO:1903798"},{"relation_name":"regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of primary miRNA processing","synonyms":[{"name":"regulation of pri-miRNA processing","type":"exact"},{"name":"regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000634"}


id: MONDO:0021001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemochromatosis type 1 (classic) is the most common form of hereditary hemochromatosis (HH), a group of diseases characterized by excessive tissue iron deposition. Due to its incidence (1/200-1/1000), it is not considered as a rare disease, unlike the other subforms of the disease","definition_xrefs":["EFO:0006513"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hereditary hemochromatosis (obsolete MONDO:0016363)","termid":"MONDO:0016363"},{"relation_name":"is_a","term_name":"hereditary hemochromatosis","termid":"MONDO:0006507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemochromatosis type 1","secondary_identifiers":["DOID:0111029","Orphanet:139498","MEDGEN:854011","NCIT:C84764","SCTID:35400008","ICD9:275.01","UMLS:C3469186","OMIM:235200"],"synonyms":[{"name":"C282Y/C282Y hemochromatosis","type":"exact"},{"name":"HFE-associated hereditary hemochromatosis","type":"exact"},{"name":"HFE-related hemochromatosis","type":"exact"},{"name":"HFE1","type":"exact"},{"name":"classic hemochromatosis","type":"exact"},{"name":"hemochromatosis","type":"exact"},{"name":"hemochromatosis type 1","type":"exact"},{"name":"hemochromatosis, type 1","type":"exact"},{"name":"hfe hemochromatosis, modifier of","type":"exact"},{"name":"symptomatic form of HFE-related hereditary hemochromatosis","type":"narrow"},{"name":"symptomatic form of classic hemochromatosis","type":"narrow"},{"name":"symptomatic form of hemochromatosis type 1","type":"exact"}],"termid":"MONDO:0021001","xrefs":{"Monarch":{"xref_id":"0021001"}}}


id: PBO:0024472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Crs102 (predicted)","termid":"PBO:0024472"}


id: PBO:0088002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ty1 enhancer activator involved in Ty enhancer-mediated transcription; required for full levels of Ty enhancer-mediated transcription; C6 zinc cluster DNA-binding protein","termid":"PBO:0088002"}


id: PR:Q09834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 44 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00302","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C4G8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.08","secondary_identifiers":["UniProtKB:Q09834"],"synonyms":[{"name":"Spom972h-SLC25A44","type":"exact"}],"termid":"PR:Q09834"}


id: FYECO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with lysine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, lysine nitrogen source","synonyms":[{"name":"glucose minimal medium, lysine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, lysine nitrogen source","type":"related"}],"termid":"FYECO:0000426"}


id: PBO:0075417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 4","termid":"PBO:0075417"}


id: PBO:0086273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a likely role in ribosomal maturation; required for accumulation of wild-type levels of large (60S) ribosomal subunits; binds to the helicase Dbp6p in pre-60S ribosomal particles in the nucleolus","termid":"PBO:0086273"}


id: MONDO:0021159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An salpingitis caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingitis","termid":"MONDO:0003619"},{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal salpingitis","secondary_identifiers":["UMLS:C0341811","SCTID:237038001","MEDGEN:574651"],"synonyms":[{"name":"Neisseria gonorrhoeae caused salpingitis","type":"exact"},{"name":"Neisseria gonorrhoeae salpingitis","type":"exact"}],"termid":"MONDO:0021159","xrefs":{"Monarch":{"xref_id":"0021159"}}}


id: PBO:0012060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-specific flocculin Gsf2","termid":"PBO:0012060"}


id: PBO:0074202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 12","termid":"PBO:0074202"}


id: PBO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kar3 subfamily","termid":"PBO:0001145"}


id: PBO:0082065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-ketosphinganine reductase; catalyzes the second step in phytosphingosine synthesis; essential for growth in the absence of exogenous dihydrosphingosine or phytosphingosine; localized to lipid droplets; member of short chain dehydrogenase/reductase protein family; mutations in human homolog KDSR cause recessive progressive symmetric erythrokeratoderma","termid":"PBO:0082065"}


id: PBO:0004660
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIRA Interacting Protein","termid":"PBO:0004660"}


id: PBO:0077998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 2","termid":"PBO:0077998"}


id: GO:0047230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: flavonol 3-O-D-glucoside + UDP-L-rhamnose = flavonol 3-O-L-rhamnosylglucoside + UDP.","definition_xrefs":["EC:2.4.1.159","MetaCyc:2.4.1.159-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"flavonol-3-O-glucoside L-rhamnosyltransferase activity","secondary_identifiers":["RHEA:22528"],"synonyms":[{"name":"UDP-L-rhamnose:flavonol-3-O-D-glucoside 6''-O-L-rhamnosyltransferase activity","type":"related"},{"name":"UDP-rhamnose:flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"},{"name":"uridine diphosphorhamnose-flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"}],"termid":"GO:0047230"}


id: PBO:0083721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident protein involved in peroxisomal biogenesis; ER-localized protein that associates with peroxisomes; interacts with Pex30p and reticulons Rtn1p and Yop1p to regulate peroxisome biogenesis from the ER; role in peroxisomal-destined vesicular flow from the ER; regulates peroxisomal size, number and distribution; Pex28p and Pex29p may act at steps upstream of those mediated by Pex30p, Pex31p, and Pex32p; forms ER foci upon DNA replication stress","termid":"PBO:0083721"}


id: PBO:0081739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 670","termid":"PBO:0081739"}


id: PBO:0113068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (Translocase of Outer Membrane) complex; responsible for initial import of mitochondrially directed proteins; mediates interaction between TOM and TIM complexes and acts as receptor for precursor proteins; implicated in mitochondrial accumulation of amyloid beta peptides via direct interaction with amyloid beta peptide residues 25-42 followed by transfer to Tom40p and transport through the TOM channel","termid":"PBO:0113068"}


id: PR:O74453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A p21-activated protein kinase-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shk1 kinase-binding protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.08c","secondary_identifiers":["UniProtKB:O74453"],"synonyms":[{"name":"Spom972h-PAK1IP1","type":"exact"}],"termid":"PR:O74453"}


id: PBO:0047017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A20, pseudogene","termid":"PBO:0047017"}


id: PBO:0011144
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondria microtubule binder","termid":"PBO:0011144"}


id: PBO:0083309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps HMLALPHA1","termid":"PBO:0083309"}


id: GO:0002649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"}


id: SO:0005854
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An array of non-functional genes whose members, when captured by recombination form functional genes.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_part","term_name":"gene_cassette","termid":"SO:0005853"},{"relation_name":"is_a","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_cassette_array","synonyms":[{"name":"gene cassette array","type":"exact"}],"termid":"SO:0005854"}


id: PBO:0068153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 460","termid":"PBO:0068153"}


id: MONDO:0032920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile arthritis due to defect in LACC1","secondary_identifiers":["GARD:16382","OMIM:618795"],"synonyms":[{"name":"JUVAR","type":"related"},{"name":"JUVENILE ARTHRITIS","type":"related"}],"termid":"MONDO:0032920","xrefs":{"Monarch":{"xref_id":"0032920"}}}


id: SO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the coding sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_variant","termid":"SO:0001791"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_sequence_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","SO:0001581","http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:coding_sequence_variant","type":"exact"},{"name":"Seattleseq:coding","type":"exact"},{"name":"VAAST:coding_sequence_variant","type":"exact"},{"name":"VEP:coding_sequence_variant","type":"exact"},{"name":"coding sequence variant","type":"exact"},{"name":"coding variant","type":"exact"},{"name":"codon variant","type":"exact"},{"name":"codon_variant","type":"exact"},{"name":"snpEff:CDS","type":"exact"},{"name":"snpEff:CODON_CHANGE","type":"related"}],"termid":"SO:0001580"}


id: GO:0019802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclization of glutamine to yield an L-glutamimide residue at the C-terminus of an excised intein during protein splicing.","definition_xrefs":["GOC:dph","RESID:AA0303","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"part_of","term_name":"intein-mediated protein splicing","termid":"GO:0016539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"cyclization of glutamine involved in intein-mediated protein splicing","synonyms":[{"name":"cyclization of glutamine, during protein splicing","type":"related"}],"termid":"GO:0019802"}


id: MOD:01859
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form 4-amino-3-isothiazolidinone-L-phenylalanine.","definition_xrefs":["RESID:AA0562","PubMed:17502599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4-amino-3-isothiazolidinone-L-phenylalanine","synonyms":[{"name":"(2S)-2-[(4R)-4-amino-3-oxo-1,2-thiazolidin-2-yl]-3-phenylpropanoic acid","type":"exact"},{"name":"2-(4-amino-3-oxo-isothiazolidin-2-yl)-3-phenylpropanoic acid","type":"exact"},{"name":"4-amino-3-isothiazolidinone-L-phenylalanine","type":"exact"},{"name":"CROSSLNK N,N-(cysteine-1,S-diyl)phenylalanine (Cys-Phe)","type":"exact"},{"name":"N,N-(L-cysteine-1,S-diyl)-L-phenylalanine","type":"exact"},{"name":"cysteinyl phenylalanine sulfenamide","type":"exact"},{"name":"phenylalanine-cysteine sulfenyl amide cross-link","type":"exact"},{"name":"phenylalanine-cysteine sulphenyl amide cross-link","type":"exact"}],"termid":"MOD:01859"}


id: GO:0043912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-lysine + H2O + O2 = 6-amino-2-oxohexanoate + H2O2 + NH4+.","definition_xrefs":["PMID:17259313"],"gene_count":0,"genotype_count":0,"name":"obsolete D-lysine oxidase activity (obsolete GO:0043912)","termid":"GO:0043912"}


id: GO:0019445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tyrosine into other compounds, including fumarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fumarate metabolic process","termid":"GO:0006106"},{"relation_name":"is_a","term_name":"tyrosine catabolic process","termid":"GO:0006572"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"tyrosine catabolic process to fumarate","secondary_identifiers":["MetaCyc:TYRFUMCAT-PWY"],"synonyms":[{"name":"tyrosine breakdown to fumarate","type":"exact"},{"name":"tyrosine degradation to fumarate","type":"exact"}],"termid":"GO:0019445"}


id: MONDO:0012105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small-vessel necrotizing vasculitis characterized by the association of inflammation of the vessel wall and peri- and extravascular granulomatosis.","definition_xrefs":["Orphanet:900"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"anti-neutrophil cytoplasmic antibody-associated vasculitis","termid":"MONDO:0015492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005240"],"is_obsolete":false,"name":"granulomatosis with polyangiitis","secondary_identifiers":["NCIT:C3444","ICD9:446.4","NORD:1840","EFO:0005297","UMLS:C3495801","ICD10CM:M31.3","NCIT:C123111","NANDO:1200263","SCTID:195353004","GARD:7880","icd11.foundation:1020056159","NANDO:1201009","MESH:D014890","MEDGEN:811223","DOID:12132","MedDRA:10047888","NANDO:2200424","OMIM:608710"],"synonyms":[{"name":"ANCA-associated vasculitis","type":"broad"},{"name":"GPA","type":"exact"},{"name":"Midline granulomatosis","type":"related"},{"name":"Wegener granulomatosis","type":"exact"},{"name":"Wegener's granulomatosis","type":"exact"},{"name":"Wegener's syndrome","type":"exact"},{"name":"Wg","type":"broad"},{"name":"granulomatosis - Wegener's","type":"exact"},{"name":"granulomatosis with polyangiitis","type":"exact"},{"name":"necrotizing respiratory granulomatosis","type":"exact"},{"name":"pauci-immune glomerulonephritis associated with granulomatosis with polyangiitis","type":"exact"}],"termid":"MONDO:0012105","xrefs":{"Monarch":{"xref_id":"0012105"}}}


id: GO:0072537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a fibroblast resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["CL:0000057","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast activation","termid":"GO:0072537"}


id: PBO:0051848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 3","termid":"PBO:0051848"}


id: PBO:0087159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pol III transcription initiation factor complex (TFIIIC) subunit; part of the TauA globular domain of TFIIIC that binds DNA at the BoxA promoter sites of tRNA and similar genes; TFC7 has a paralog, YNL108C, that arose from the whole genome duplication","termid":"PBO:0087159"}


id: PBO:0056000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056000"}


id: GO:0031527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a filopodium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"filopodium membrane","termid":"GO:0031527"}


id: PATO:0002285
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Branchiness quality inhering in a bearer by virtue of increasing the degree to which there are subdivisions or offshoots in a bearer entity.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased branchiness","termid":"PATO:0002285"}


id: GO:0010331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a gibberellin, a plant hormone that regulates aspects of plant growth.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"gibberellin binding","synonyms":[{"name":"gibberellic acid receptor","type":"related"},{"name":"gibberellin receptor","type":"related"}],"termid":"GO:0010331"}


id: PBO:0087638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis prior to SNARE-mediated fusion; PtdIns[4,5]P2-binding protein that localizes to exocytic sites in an actin-independent manner, targeting and anchoring the exocyst with Sec3p; involved in exocyst assembly; direct downstream effector of Rho3p and Cdc42p; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0087638"}


id: PBO:0077542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 254","termid":"PBO:0077542"}


id: PBO:0042335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD63 antisense RNA 1","termid":"PBO:0042335"}


id: GO:2001033
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101548],"is_not":false,"summary":null,"term":"GO:2001033"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair","termid":"GO:2000780"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair via nonhomologous end joining","termid":"GO:2001032"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of NHEJ","type":"exact"}],"termid":"GO:2001033","terms_by_termid":{"GO:2001033":null}}


id: MONDO:0012325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nguyen syndrome","secondary_identifiers":["MEDGEN:400620","OMIM:609643","MESH:C536115","UMLS:C1864823"],"synonyms":[{"name":"MCA/MR syndrome with hypocholesterolemia due to familial hypobetalipoproteinemia","type":"related"},{"name":"MCA/Mr with hypocholesterolemia due to familial hypobetalipoproteinemia","type":"related"},{"name":"Nguyen syndrome","type":"exact"}],"termid":"MONDO:0012325","xrefs":{"Monarch":{"xref_id":"0012325"}}}


id: GO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a basophil resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the basophil has specifically bound via IgE bound to Fc-epsilonRI receptors, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"},{"relation_name":"is_a","term_name":"basophil activation","termid":"GO:0045575"},{"relation_name":"part_of","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil activation involved in immune response","synonyms":[{"name":"basophil activation during immune response","type":"related"}],"termid":"GO:0002276"}


id: PBO:0029460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enlarged_nucleus","termid":"PBO:0029460"}


id: MONDO:0019138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bleeding diathesis due to a collagen receptor defect (obsolete MONDO:0019138)","secondary_identifiers":["Orphanet:73271"],"termid":"MONDO:0019138","xrefs":{"Monarch":{"xref_id":"0019138"}}}


id: PBO:0029133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_body_absent_from_cell_after_meiosis_II","termid":"PBO:0029133"}


id: PR:O74739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12143:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.14","secondary_identifiers":["UniProtKB:O74739"],"synonyms":[{"name":"PNGase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1709.14","type":"related"},{"name":"Spom972h-NGLY1","type":"exact"},{"name":"peptide:N-glycanase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74739"}


id: GO:0140924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-kynurenine across a membrane.","definition_xrefs":["PMID:35245456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-kynurenine transmembrane transport","termid":"GO:0140924"}


id: MONDO:0005857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with viruses of the genus morbillivirus, family paramyxoviridae. Infections mainly cause acute disease in their hosts, although in some cases infection is persistent and leads to degenerative conditions.","definition_xrefs":["MESH:D018185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Paramyxoviridae infectious disease","termid":"MONDO:0005896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morbillivirus infectious disease","secondary_identifiers":["EFO:0007377","UMLS:C0206614","MEDGEN:61642"],"synonyms":[{"name":"Morbillivirus caused disease or disorder","type":"exact"},{"name":"Morbillivirus disease or disorder","type":"exact"},{"name":"Morbillivirus infectious disease","type":"exact"}],"termid":"MONDO:0005857","xrefs":{"Monarch":{"xref_id":"0005857"}}}


id: MONDO:0006407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse malignant mesothelioma arising from the pleura and less often the peritoneum. It is characterized by the presence of spindle cells. Anaplastic morphologic features and multinucleated malignant cells may also be seen.","definition_xrefs":["NCIT:C45655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcomatoid mesothelioma","secondary_identifiers":["UMLS:C0334513","EFO:1000521","MEDGEN:137774","DOID:4488"],"synonyms":[{"name":"malignant fibrous mesothelioma","type":"exact"},{"name":"malignant fibrous mesothelioma (morphologic abnormality)","type":"exact"},{"name":"sarcomatoid mesothelioma","type":"exact"},{"name":"sarcomatoid mesothelioma (morphologic abnormality)","type":"exact"},{"name":"spindled mesothelioma","type":"exact"}],"termid":"MONDO:0006407","xrefs":{"Monarch":{"xref_id":"0006407"}}}


id: SO:0000972
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000972 RNA_replication_mode (obsolete SO:0000972)","synonyms":[{"name":"RNA replication mode","type":"exact"}],"termid":"SO:0000972"}


id: MONDO:1010834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilson disease that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilson disease, non-human animal","termid":"MONDO:1010164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease, pig","secondary_identifiers":["OMIA:001071-9823"],"termid":"MONDO:1010834","xrefs":{"Monarch":{"xref_id":"1010834"}}}


id: GO:0010081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of an inflorescence meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meristem growth","termid":"GO:0010075"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"inflorescence meristem growth","termid":"GO:0010450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflorescence meristem growth","synonyms":[{"name":"regulation of inflorescence meristem size","type":"exact"}],"termid":"GO:0010081"}


id: FYPO:0007905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which beta-glucan biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucan synthesis","termid":"FYPO:0007904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal beta-glucan synthesis","synonyms":[{"name":"abnormal beta-glucan biosynthetic process","type":"exact"}],"termid":"FYPO:0007905"}


id: GO:0106049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cellular response to osmotic stress.","definition_xrefs":["PMID:10398679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to osmotic stress","termid":"GO:0047484"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to osmotic stress","termid":"GO:0106049"}


id: MONDO:0008859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"berry aneurysm, cirrhosis, pulmonary emphysema, and cerebral calcification","secondary_identifiers":["MESH:C565905","OMIM:210050","UMLS:C1859519","MEDGEN:347170"],"synonyms":[{"name":"berry aneurysm, cirrhosis, pulmonary emphysema, and cerebral calcification","type":"exact"},{"name":"cerebral aneurysm-cirrhosis syndrome","type":"related"}],"termid":"MONDO:0008859","xrefs":{"Monarch":{"xref_id":"0008859"}}}


id: GO:0072033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the renal vesicle from condensed mesenchymal cells. The renal vesicle is the primordial structure of the nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"renal vesicle morphogenesis","termid":"GO:0072077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal vesicle formation","synonyms":[{"name":"nephron epithelium formation","type":"related"}],"termid":"GO:0072033"}


id: PBO:0085545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; overproduction suppresses mutations affecting RNA polymerase III-dependent transcription; homologous to mammalian ribosomal protein S20 and bacterial S10","termid":"PBO:0085545"}


id: MONDO:0006446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell neoplasm arising from the testis. It is composed of primitive epithelial cells arranged in solid, papillary, and glandular configurations. Most patients present with a testicular mass, which may be associated with pain. More than half of the patients have metastatic disease at diagnosis. The form of treatment following radical orchiectomy is stage dependent.","definition_xrefs":["NCIT:C6341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular pure germ cell tumor","termid":"MONDO:0002874"},{"relation_name":"is_a","term_name":"testicular non-seminomatous germ cell cancer","termid":"MONDO:0003403"},{"relation_name":"is_a","term_name":"embryonal carcinoma","termid":"MONDO:0005440"},{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular embryonal carcinoma","secondary_identifiers":["DOID:5680","EFO:1000565","MEDGEN:66771","UMLS:C0238448"],"synonyms":[{"name":"embryonal carcinoma of testis","type":"exact"},{"name":"embryonal carcinoma of the testis","type":"exact"},{"name":"embryonal testis carcinoma","type":"exact"},{"name":"testicular embryonal carcinoma","type":"exact"},{"name":"testis embryonal carcinoma","type":"exact"}],"termid":"MONDO:0006446","xrefs":{"Monarch":{"xref_id":"0006446"}}}


id: GO:0036524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a sugar or dicarbonyl from a glycated L-arginine, L-lysine or L-cysteine residue within proteins that have been attacked and modified by glyoxal or 2-oxopropanal.","definition_xrefs":["PMID:26873906","PMID:25416785","EC:3.5.1.124","GOC:bf","GOC:PARL","PMID:14568004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"protein deglycase activity","synonyms":[{"name":"glyoxylase III","type":"exact"},{"name":"protein deglycating enzyme","type":"related"}],"termid":"GO:0036524"}


id: PBO:0061885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer mitochondrial membrane lipid metabolism regulator OPA3","termid":"PBO:0061885"}


id: PBO:0040380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PO pseudogene 1","termid":"PBO:0040380"}


id: GO:0017118
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104400],"is_not":false,"summary":null,"term":"GO:0017118"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lipoyl-5'-AMP + L-lysyl-[lipoyl-carrier protein] = (R)-N6-lipoyl-L-lysyl-[lipoyl-carrier protein] + AMP + 2 H+.","definition_xrefs":["RHEA:20473","PMID:10103005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"lipoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017118","terms_by_termid":{"GO:0017118":null}}


id: GO:0003133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from endodermal cells to mesodermal cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endodermal-mesodermal cell signaling","synonyms":[{"name":"endodermal-mesodermal cell signalling","type":"exact"}],"termid":"GO:0003133"}


id: FYPO:0003861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the pH of a growth medium in which a cell population grows to stationary phase decreases to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["PMID:23874875","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal acidification of growth medium in stationary phase","termid":"FYPO:0003861"}


id: GO:0047997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypyruvate + H+ = CO2 + glycolaldehyde.","definition_xrefs":["RHEA:20561","EC:4.1.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"hydroxypyruvate decarboxylase activity","secondary_identifiers":["MetaCyc:HYDROXYPYRUVATE-DECARBOXYLASE-RXN","KEGG_REACTION:R01393"],"synonyms":[{"name":"hydroxypyruvate carboxy-lyase (glycolaldehyde-forming)","type":"related"},{"name":"hydroxypyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0047997"}


id: MONDO:0008174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pachyonychia congenita in which the cause of the disease is a mutation in the KRT17 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pachyonychia congenita","termid":"MONDO:0016471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita 2","secondary_identifiers":["GARD:15103","OMIM:167210","UMLS:C1721007","MEDGEN:314107"],"synonyms":[{"name":"KRT17 pachyonychia congenita","type":"exact"},{"name":"PC2","type":"related"},{"name":"pachyonychia congenita 2","type":"exact"},{"name":"pachyonychia congenita caused by mutation in KRT17","type":"exact"},{"name":"pachyonychia congenita type 2","type":"exact"},{"name":"pachyonychia congenita, Jackson-Lawler type","type":"related"},{"name":"pachyonychia congenita, Jackson-Lawler type, formerly","type":"related"}],"termid":"MONDO:0008174","xrefs":{"Monarch":{"xref_id":"0008174"}}}


id: SO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A terminal region of DNA sequence where the end of the region is not blunt ended and the exposed single strand terminates at the 3' end.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_single_strand_overhang","termid":"SO:0001695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_three_prime_single_strand_overhang","synonyms":[{"name":"restriction enzyme three prime single strand overhang","type":"exact"}],"termid":"SO:0001933"}


id: PBO:0052530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 3","termid":"PBO:0052530"}


id: PBO:0113118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsin-like protein involved in endocytosis and actin patch assembly; K63-specific Ub chain binding protein that functions as an endocytic adaptor; binds clathrin via a clathrin-binding domain motif at C-terminus; contains two ubiquitin-interacting motifs (UIMs); functionally redundant with Ent2p; relocalizes from bud neck to cytoplasm upon DNA replication stress; ENT1 has a paralog, ENT2, that arose from the whole genome duplication","termid":"PBO:0113118"}


id: MONDO:0007342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common congenital deformation of the foot, occurring in 1 of 1,000 live births. The most common form is talipes equinovarus, where the deformed foot is turned downward and inward sharply.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial clubfoot with or without associated lower limb anomalies","termid":"MONDO:0016046"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clubfoot","secondary_identifiers":["MEDGEN:3130","MESH:D003025","OMIM:119800","NCIT:C84641","UMLS:C0009081","SCTID:397932003","ICD9:754.51","DOID:11836"],"synonyms":[{"name":"CCF","type":"related"},{"name":"club foot","type":"exact"},{"name":"clubbed foot","type":"exact"},{"name":"clubfoot, congenital, with or without deficiency of long bones and/or mirror-IMAGE polydactyly","type":"related"},{"name":"congenital clubfoot","type":"exact"},{"name":"congenital equinovarus","type":"exact"},{"name":"congenital talipes equinovarus","type":"exact"},{"name":"equinovarus deformity of foot","type":"exact"},{"name":"equinovarus deformity of foot (finding)","type":"exact"},{"name":"talipes","type":"exact"},{"name":"talipes equinovarus","type":"exact"}],"termid":"MONDO:0007342","xrefs":{"Monarch":{"xref_id":"0007342"}}}


id: PBO:0002915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-tyrosine phosphatase Pyp3","termid":"PBO:0002915"}


id: PBO:0076933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 1","termid":"PBO:0076933"}


id: MONDO:0100241
data:
  {"annotated_genes":["SJAG_02509","SJAG_04387","SJAG_04509","SJAG_01732","SJAG_02431","SJAG_03703","SJAG_02951","SJAG_01784","SJAG_02744","SJAG_04003","SJAG_01852","SJAG_04621","SJAG_03818"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85582,85583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[85862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[86180,86181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"},{"annotations":[85130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[84380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014078"},{"annotations":[86414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010743"},{"annotations":[86377,86375,86376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958333"},{"annotations":[85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012775"},{"annotations":[86310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"An instance of thrombocytopenia that is inherited.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia","termid":"MONDO:0002049"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01784":null,"SJAG_01852":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02744":null,"SJAG_02951":null,"SJAG_03703":null,"SJAG_03818":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04509":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"inherited thrombocytopenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:313900"],"synonyms":[{"name":"hereditary thrombocytopenia","type":"exact"}],"termid":"MONDO:0100241","terms_by_termid":{"MONDO:0010121":null,"MONDO:0010743":null,"MONDO:0012775":null,"MONDO:0014078":null,"MONDO:0014757":null,"MONDO:0015912":null,"MONDO:0030827":null,"MONDO:0800047":null,"MONDO:0958333":null},"xrefs":{"Monarch":{"xref_id":"0100241"}}}


id: PBO:0043012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHKA divergent transcript","termid":"PBO:0043012"}


id: PBO:0062489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 5 pseudogene","termid":"PBO:0062489"}


id: PBO:0045104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in malignant brain tumors 1","termid":"PBO:0045104"}


id: PBO:0050512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C12","termid":"PBO:0050512"}


id: MONDO:0019166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete strongyloidiasis (obsolete MONDO:0019166)","termid":"MONDO:0019166","xrefs":{"Monarch":{"xref_id":"0019166"}}}


id: PBO:0003022
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forced sequence to give coding product","termid":"PBO:0003022"}


id: PBO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein (predicted)","termid":"PBO:0000410"}


id: PATO:0001372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in propagating wave (light or sound) virtue of the bearer's change in direction when passing from one medium to another.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refractivity","termid":"PATO:0001372"}


id: PBO:0079424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 7","termid":"PBO:0079424"}


id: PBO:0088837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex kleisin subunit Rad21","termid":"PBO:0088837"}


id: PBO:0059245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L15","termid":"PBO:0059245"}


id: PBO:0080434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 18","termid":"PBO:0080434"}


id: PATO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's amount of osmoles of solute per liter of solution.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Osmolarity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osmolarity","termid":"PATO:0001655"}


id: MONDO:0016692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytic tumor of uncertain relation to pilocytic astrocytoma. It occurs predominantly in infants and young children. It is characterized by a monomorphic architectural pattern, usually associated with the absence of Rosenthal fibers and eosinophilic granular bodies. The clinical course is usually aggressive.","definition_xrefs":["NCIT:C40315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilocytic astrocytoma","termid":"MONDO:0016691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pilomyxoid astrocytoma","secondary_identifiers":["Orphanet:251615","DOID:4845","GARD:20710","MEDGEN:276757","ONCOTREE:PMA","UMLS:C1519086","ICDO:9425/3"],"synonyms":[{"name":"PMA","type":"related"}],"termid":"MONDO:0016692","xrefs":{"Monarch":{"xref_id":"0016692"}}}


id: PBO:0071907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 46","termid":"PBO:0071907"}


id: MONDO:0018488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic odontal or periodontal disorder (obsolete MONDO:0018488)","secondary_identifiers":["Orphanet:420755"],"termid":"MONDO:0018488","xrefs":{"Monarch":{"xref_id":"0018488"}}}


id: PBO:0079388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 3 class III","termid":"PBO:0079388"}


id: PBO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 23","termid":"PBO:0075270"}


id: GO:1901775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mitomycin C.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:10094699","PMID:10099135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitomycin C metabolic process","synonyms":[{"name":"mitomycin C metabolism","type":"exact"}],"termid":"GO:1901775"}


id: PBO:0036298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg101","termid":"PBO:0036298"}


id: PBO:0039351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1 pseudogene 1","termid":"PBO:0039351"}


id: PBO:0046114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 1","termid":"PBO:0046114"}


id: PBO:0049592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 10","termid":"PBO:0049592"}


id: FYPO:0006925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad51 accumulates at or near replication fork barriers is lower than normal.","definition_xrefs":["PMID:31149897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased number of Rad51 foci at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased number of Rad51 foci at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased number of Rad51 foci at mitotic DNA replication fork barriers during vegetative growth","type":"related"},{"name":"reduced number of Rad51 foci at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006925"}


id: MONDO:0007910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein types--Lt system","secondary_identifiers":["OMIM:152300","UMLS:C1835359","MEDGEN:322644"],"synonyms":[{"name":"lipoprotein types--Lt system","type":"exact"}],"termid":"MONDO:0007910","xrefs":{"Monarch":{"xref_id":"0007910"}}}


id: GO:0008189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function held by products which directly block any step in the process of apoptosis.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptosis inhibitor activity (obsolete GO:0008189)","synonyms":[{"name":"apoptosis inhibitor activity","type":"exact"}],"termid":"GO:0008189"}


id: PBO:0082860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of TRAPP complexes I, II and IV; transport protein particle (TRAPP) complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII, and IV); proposed subunit of a novel complex, TRAPPIV, that may function redundantly with TRAPPIII as a GEF that activates Ypt1 during autophagy","termid":"PBO:0082860"}


id: PBO:0083106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase/Ubiquitin ligase; involved in error-free DNA damage tolerance (DDT), replication fork regression during postreplication repair by template switching, and error-prone translesion synthesis; required for UV and MMS-associated unequal sister chromatid exchange (SCE) but not for double-strand break associated unequal SCE; promotes synthesis of free and PCNA-bound polyubiquitin chains by Ubc13p-Mms2p; human homolog HLTF can complement yeast null mutant","termid":"PBO:0083106"}


id: GO:1901176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lycopene.","definition_xrefs":["UniPathway:UPA00803","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"lycopene metabolic process","termid":"GO:1901175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lycopene catabolic process","synonyms":[{"name":"lycopene breakdown","type":"exact"},{"name":"lycopene catabolism","type":"exact"},{"name":"lycopene degradation","type":"exact"}],"termid":"GO:1901176"}


id: GO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex formed by a recombinase, a regulatory protein, and the DNA sequences bound by each protein; catalyzes a reversible site-specific recombination reaction that results in the alternate expression of one or more genes in various contexts.","definition_xrefs":["PMID:9732277","PMID:11114897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"invertasome","termid":"GO:0031421"}


id: GO:0090696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development, taking place during the post-embryonic phase of a plant tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic plant organ development","termid":"GO:0090696"}


id: PR:Q92374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssb3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor A protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.05c","synonyms":[{"name":"Spom972h-ssb3","type":"exact"},{"name":"single-stranded DNA-binding protein P12 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92374"}


id: PBO:0060376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb related transcription factor, partner of profilin","termid":"PBO:0060376"}


id: PBO:0068276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 12 (inactive)","termid":"PBO:0068276"}


id: PATO:0001044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001044 absolute power (obsolete PATO:0001044)","termid":"PATO:0001044"}


id: GO:0001732
data:
  {"annotated_genes":["SJAG_02390","SJAG_04981","SJAG_03472","SJAG_03147","SJAG_02376","SJAG_02995","SJAG_02164","SJAG_04900","SJAG_02628","SJAG_04891","SJAG_04744","SJAG_00662"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89148,93986,95065,96048,96924,96985,98125,99289,104483,104768,109841,110483],"is_not":false,"summary":null,"term":"GO:0001732"}]},"cv_name":"biological_process","definition":"Joining of the large ribosomal subunit with the translation preinitiation complex, with release of IF2/eIF2 and IF3/eIF3 or IF5B/eIF5B. This leaves the functional ribosome at the AUG, with the methionyl/formyl-methionyl-tRNA positioned at the P site.","definition_xrefs":["PMID:29735639","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_02164":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0065003","GO:0008150","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"formation of cytoplasmic translation initiation complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic translation initiation complex assembly","type":"exact"},{"name":"formation of translation initiation complex","type":"broad"},{"name":"translation initiation complex assembly","type":"broad"}],"termid":"GO:0001732","terms_by_termid":{"GO:0001732":null}}


id: MONDO:0000884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloid and lymphoid neoplasms associated with FGFR1 abnormalities (obsolete MONDO:0000884)","termid":"MONDO:0000884","xrefs":{"Monarch":{"xref_id":"0000884"}}}


id: GO:1905006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial to mesenchymal transition involved in endocardial cushion formation.","definition_xrefs":["GOC:TermGenie","PMID:18718461","GOC:rl","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062044"},{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:1905005"},{"relation_name":"negatively_regulates","term_name":"epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","synonyms":[{"name":"down regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"down-regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"downregulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"inhibition of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"narrow"}],"termid":"GO:1905006"}


id: PBO:0029211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dTTP_biosynthetic_process","termid":"PBO:0029211"}


id: PBO:0066784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 82","termid":"PBO:0066784"}


id: SO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA that catalyzes its own cleavage.","direct_ancestors":[{"relation_name":"has_quality","term_name":"ribonuclease_site","termid":"SO:0001977"},{"relation_name":"is_a","term_name":"ribozyme","termid":"SO:0000374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"self_cleaving_ribozyme","synonyms":[{"name":"self cleaving ribozyme","type":"exact"}],"termid":"SO:0002231"}


id: PBO:0079680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A pseudogene 2","termid":"PBO:0079680"}


id: FYPO:0008003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein at a site of mechanical stress on the cell surface is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mlr","PMID:34666001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to site of mechanical stress","termid":"FYPO:0008003"}


id: GO:0015253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sugar/polyol channel activity (obsolete GO:0015253)","synonyms":[{"name":"sugar/polyol channel activity","type":"exact"}],"termid":"GO:0015253"}


id: PBO:0031783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_cytokinesis","termid":"PBO:0031783"}


id: FYPO:0005537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomerase holoenzyme complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal telomerase holoenzyme complex assembly","synonyms":[{"name":"normal telomerase holoenzyme complex assembly during mitotic cell cycle","type":"related"},{"name":"normal telomerase holoenzyme complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005537"}


id: GO:2000114
data:
  {"annotated_genes":["SJAG_00845","SJAG_00317","SJAG_04522","SJAG_02536","SJAG_03581","SJAG_03126","SJAG_01373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93781,111105],"is_not":false,"summary":null,"term":"GO:2000114"},{"annotations":[90168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[102878,106770,111608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"},{"annotations":[106771,115719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of cell polarity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"regulates","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00317":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03581":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of bud site selection/establishment of cell polarity","type":"related"},{"name":"regulation of cell polarization","type":"exact"}],"termid":"GO:2000114","terms_by_termid":{"GO:0061173":null,"GO:1904846":null,"GO:2000114":null,"GO:2000784":null}}


id: GO:0010611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"cardiac muscle hypertrophy","termid":"GO:0003300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle hypertrophy","termid":"GO:0010611"}


id: GO:2000232
data:
  {"annotated_genes":["SJAG_01764","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95415,91246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000234"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01764":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of rRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 35S primary transcript processing","type":"related"}],"termid":"GO:2000232","terms_by_termid":{"GO:2000234":null}}


id: PBO:0113340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; well conserved across Saccharomyces species; added to genome annotation based on proteomic, translation, and evolutionary evidence","termid":"PBO:0113340"}


id: GO:0034361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich plasma lipoprotein particle","termid":"GO:0034385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"very-low-density lipoprotein particle","synonyms":[{"name":"VLDL complex","type":"exact"},{"name":"VLDL particle","type":"exact"},{"name":"very-low-density lipoprotein complex","type":"exact"}],"termid":"GO:0034361"}


id: MONDO:1012415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sebaceous adenitis, non-human animal","termid":"MONDO:1011755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sebaceous adenitis, dog","secondary_identifiers":["OMIA:001563-9615"],"termid":"MONDO:1012415","xrefs":{"Monarch":{"xref_id":"1012415"}}}


id: GO:1905911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dauer entry.","definition_xrefs":["GOC:TermGenie","PMID:21531333","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of dauer entry","termid":"GO:1905909"},{"relation_name":"positively_regulates","term_name":"dauer entry","termid":"GO:0043053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dauer entry","synonyms":[{"name":"activation of dauer entry","type":"narrow"},{"name":"activation of nematode entry into dormancy","type":"narrow"},{"name":"positive regulation of nematode entry into dormancy","type":"exact"},{"name":"up regulation of dauer entry","type":"exact"},{"name":"up regulation of nematode entry into dormancy","type":"exact"},{"name":"up-regulation of dauer entry","type":"exact"},{"name":"up-regulation of nematode entry into dormancy","type":"exact"},{"name":"upregulation of dauer entry","type":"exact"},{"name":"upregulation of nematode entry into dormancy","type":"exact"}],"termid":"GO:1905911"}


id: PBO:0072644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of telomere elongation helicase 1 pseudogene 1","termid":"PBO:0072644"}


id: GO:0045339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of farnesyl diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"},{"relation_name":"is_a","term_name":"farnesyl diphosphate metabolic process","termid":"GO:0045338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"farnesyl diphosphate catabolic process","synonyms":[{"name":"farnesyl diphosphate breakdown","type":"exact"},{"name":"farnesyl diphosphate catabolism","type":"exact"},{"name":"farnesyl diphosphate degradation","type":"exact"}],"termid":"GO:0045339"}


id: FYPO:0000029
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118340,118338,118339],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome segregation is abnormal. Chromosome segregation begins with the alignment of chromosomes at the metaphase plate, includes sister chromatid separation, and ends when chromosomes have completed movement to the spindle poles.","definition_xrefs":["PomBase:mah","GO:0007059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromosome segregation","references_by_uniquename":{"PMID:24184107":null},"secondary_identifiers":["FYPO:0000226"],"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"centromere function defective","type":"related"},{"name":"chromosome missegregation","type":"related"},{"name":"chromosome segregation defects","type":"exact"},{"name":"chromosome segregation: abnormal","type":"related"}],"termid":"FYPO:0000029","terms_by_termid":{"FYPO:0000671":null}}


id: PBO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_actin_filaments","termid":"PBO:0030016"}


id: GO:0140591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which large macromolecular complexes are budded through the inner nuclear membrane, into the perinuclear space, thus acquiring a membrane envelope. The enveloped particle fuses with the outer nuclear membrane and is released into the cytoplasm.","definition_xrefs":["PMID:32503943","PMID:27236823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear export","termid":"GO:0051168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nuclear envelope budding","termid":"GO:0140591"}


id: PBO:0036237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase complex and tRNA (m2G10) methyltransferase complex regulatory subunit Trm112 (predicted)","termid":"PBO:0036237"}


id: GO:0070506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a high-density lipoprotein particle and delivering the high-density lipoprotein into the cell via endocytosis.","definition_xrefs":["PMID:9211901","GOC:BHF","GOC:bf","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor activity","termid":"GO:0030228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"high-density lipoprotein particle receptor activity","synonyms":[{"name":"HDL receptor","type":"exact"},{"name":"high-density lipoprotein receptor activity","type":"exact"}],"termid":"GO:0070506"}


id: GO:1903159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any malate transmembrane transporter activity that is involved in malate import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GOC:TermGenie","GOC:dos","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete malate transmembrane transporter activity involved in malate import into cell (obsolete GO:1903159)","synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity involved in malate import into cell","type":"related"},{"name":"malate transmembrane transporter activity involved in malate import into cell","type":"exact"}],"termid":"GO:1903159"}


id: MONDO:0018167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary essential cutis verticis gyrata is a rare, progressive dermis disorder characterized by thickening of the scalp resulting in redundancy of the skin which gives rise to folds and grooves that give the scalp a cerebriform appearance. Folds cannot be corrected by pressure or traction and typically are symmetric and extend anteroposteriorly from vertex to occiput and/or transversely in occipital region. Additional features may include mild subungual hyperkeratosis and distal onycholysis of the nail plates of the great toes. It is not associated with neurological and ophthalmological changes, nor with secondary causes.","definition_xrefs":["Orphanet:357220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutis verticis gyrata","termid":"MONDO:0019033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"primary essential cutis verticis gyrata","secondary_identifiers":["UMLS:C4707327","MEDGEN:1632625","icd11.foundation:895947895","GARD:21537","SCTID:765135003"],"termid":"MONDO:0018167","xrefs":{"Monarch":{"xref_id":"0018167"}}}


id: PR:P40976
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminoadipate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP7G5.04c","synonyms":[{"name":"L-aminoadipate-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys1","type":"exact"},{"name":"alpha-AR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-aminoadipate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40976"}


id: PBO:0090093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase","termid":"PBO:0090093"}


id: PBO:0036262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Rna14","termid":"PBO:0036262"}


id: PBO:0062458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 136 pseudogene","termid":"PBO:0062458"}


id: GO:0018572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,5-dichlorocatechol + O2 = 2 H+ + 2,4-dichloro-cis,cis-muconate.","definition_xrefs":["UM-BBD_reactionID:r0276"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,5-dichlorocatechol 1,2-dioxygenase activity (obsolete GO:0018572)","termid":"GO:0018572"}


id: PBO:0005178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase Tdp1","termid":"PBO:0005178"}


id: PBO:0083514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF IST1/YNL265C","termid":"PBO:0083514"}


id: MONDO:0010157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tryptophanuria with dwarfism","secondary_identifiers":["SCTID:12045002","UMLS:C0268473","MEDGEN:78680","OMIM:276100","MESH:C562658","ICD9:259.4"],"synonyms":[{"name":"Tryptophanuria with dwarfism","type":"exact"}],"termid":"MONDO:0010157","xrefs":{"Monarch":{"xref_id":"0010157"}}}


id: PBO:0080114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV radiation resistance associated","termid":"PBO:0080114"}


id: MONDO:0020442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left superior vena cava persisting to left-sided atrium","secondary_identifiers":["SCTID:445436005","UMLS:C5680292","MEDGEN:1843013","GARD:19654","ICD9:747.49","Orphanet:99111"],"synonyms":[{"name":"left SVC persisting to left-sided atrium","type":"exact"},{"name":"left superior caval vein persisting to left-sided atrium","type":"exact"}],"termid":"MONDO:0020442","xrefs":{"Monarch":{"xref_id":"0020442"}}}


id: GO:0061423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter resulting in the increased frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:11523797","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061423)","termid":"GO:0061423"}


id: PBO:0087127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein; part of U3 snoRNP involved in rRNA processing, part of U4/U6-U5 tri-snRNP involved in mRNA splicing, similar to human 15.5K protein","termid":"PBO:0087127"}


id: MONDO:0006619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A virus-induced exanthem","definition_xrefs":["EFO:1000776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"viral exanthem","secondary_identifiers":["MEDGEN:509133","DOID:8672","ICD9:057.8","ICD9:057.9","SCTID:49882001","UMLS:C0153062"],"termid":"MONDO:0006619","xrefs":{"Monarch":{"xref_id":"0006619"}}}


id: MONDO:0020509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary syringomyelia is a rare medullar disease defined as a development of a fluid-filled cavity or syrinx within the spinal cord due to blockage of CSF circulation (e.g., due to basal archnoiditis, meningeal carcinomatosis, various mass lesions), spinal cord injury (e.g., due to trauma, radiation necrosis, hemorrhage, spinal abscess), spinal dysraphism or intramedullary tumors. It presents with neuropathic pain, numbness, muscular weakness, changes in tone or spasticity or autonomic changes (hyperhidrosis, heart rate or blood pressure instability). Selective loss of pain and temperature with relative preservation of dorsal column function (touch and pressure) are classic findings.","definition_xrefs":["Orphanet:99857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia","termid":"MONDO:0017987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary syringomyelia","secondary_identifiers":["MEDGEN:1649806","GARD:19692","UMLS:C4749399"],"termid":"MONDO:0020509","xrefs":{"Monarch":{"xref_id":"0020509"}}}


id: PBO:0077824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3C","termid":"PBO:0077824"}


id: PBO:0081805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 734, pseudogene","termid":"PBO:0081805"}


id: MONDO:0100067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spindle cell rhabdomyosarcoma occurring in children.","definition_xrefs":["NCIT:C123397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell rhabdomyosarcoma","termid":"MONDO:0002581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood spindle cell rhabdomyosarcoma","secondary_identifiers":["MEDGEN:882003","UMLS:C4055242"],"termid":"MONDO:0100067","xrefs":{"Monarch":{"xref_id":"0100067"}}}


id: PBO:0003382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide (predicted)","termid":"PBO:0003382"}


id: MONDO:1010805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, domestic guinea pig","secondary_identifiers":["OMIA:000810-10141"],"termid":"MONDO:1010805","xrefs":{"Monarch":{"xref_id":"1010805"}}}


id: PBO:0001623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin","termid":"PBO:0001623"}


id: GO:0140629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a small conductance calcium-activated potassium channel.","definition_xrefs":["PMID:20562108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel inhibitor activity","termid":"GO:0140629"}


id: GO:0019229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"},{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction","termid":"GO:0019229"}


id: GO:0034061
data:
  {"annotated_genes":["SJAG_05197","SJAG_03906","SJAG_05979","SJAG_00814","SJAG_02818","SJAG_05239","SJAG_02658","SJAG_04877","SJAG_16460","SJAG_00611","SJAG_04089","SJAG_04791","SJAG_00153","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94435],"is_not":false,"summary":null,"term":"GO:0034061"},{"annotations":[103169,98505,102060,104099,106514,108266,102010,115495,102082,95077,116454,96629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003887"},{"annotations":[107094,107095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["RHEA:22508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_05979":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0140097","GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"DNA polymerase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034061","terms_by_termid":{"GO:0003720":null,"GO:0003887":null,"GO:0034061":null}}


id: PBO:0044767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 50 pseudogene 1","termid":"PBO:0044767"}


id: POMBASE_GENE_EX_REL:in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a substance is present","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_presence_of","termid":"POMBASE_GENE_EX_REL:in_presence_of"}


id: PR:O59826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A voltage-gated potassium channel subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage-gated potassium channel subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.06","secondary_identifiers":["UniProtKB:O59826"],"synonyms":[{"name":"K(+) channel subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KCNAB1","type":"exact"}],"termid":"PR:O59826"}


id: MONDO:0014571
data:
  {"annotated_genes":["SJAG_03588","SJAG_01630"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84665,84666],"is_not":false,"summary":null,"term":"MONDO:0014571"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18199","DOID:0111442","OMIM:616289","UMLS:C4225384","MEDGEN:898858"],"synonyms":[{"name":"ACO2 autosomal recessive isolated optic atrophy","type":"exact"},{"name":"OPA9","type":"related"},{"name":"autosomal recessive isolated optic atrophy caused by mutation in ACO2","type":"exact"},{"name":"optic atrophy 9","type":"exact"}],"termid":"MONDO:0014571","terms_by_termid":{"MONDO:0014571":null},"xrefs":{"Monarch":{"xref_id":"0014571"}}}


id: PR:000037030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rho3 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"Spom-rho3","type":"exact"}],"termid":"PR:000037030"}


id: GO:0061136
data:
  {"annotated_genes":["SJAG_00712","SJAG_00766","SJAG_03699","SJAG_02485","SJAG_00071","SJAG_00642","SJAG_01528","SJAG_00052","SJAG_03048","SJAG_01489","SJAG_02723","SJAG_01210","SJAG_02244","SJAG_01544","SJAG_00475","SJAG_04477","SJAG_01131"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[95735,99059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[89609,106108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[88155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[67960,66422,61113,66711,67660,64989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[101566,105816,108043,116204,110856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[113763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"regulates","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01528":null,"SJAG_01544":null,"SJAG_02244":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of proteasomal protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0061136","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:1901800":null,"GO:1904293":null,"GO:1905785":null,"GO:1905786":null}}


id: PBO:0084926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 3' end processing factor; essential component of cleavage and polyadenylation factor IA (CF IA), involved in pre-mRNA 3' end processing and in transcription termination; binds C-terminal domain of largest subunit of RNA pol II (Rpo21p); required for gene looping; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084926"}


id: PBO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_trichostatin_A","termid":"PBO:0031052"}


id: GO:1903891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the ATF6-mediated unfolded protein response.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000058","PMID:22013210","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"regulates","term_name":"ATF6-mediated unfolded protein response","termid":"GO:0036500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of ATF6-mediated unfolded protein response","synonyms":[{"name":"regulation of ATF6 branch of UPR","type":"exact"},{"name":"regulation of ATF6 signal transduction pathway","type":"broad"},{"name":"regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:1903891"}


id: PBO:0083280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the essential gene UGP1 gene and uncharacterized ORF YKL037W","termid":"PBO:0083280"}


id: GO:0042283
data:
  {"annotated_genes":["SJAG_01950"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89582],"is_not":false,"summary":null,"term":"GO:0042283"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of the second glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation; the transfer of glucose from dolichyl phosphate glucose (Dol-P-Glc) on to the lipid-linked oligosaccharide Glc(1)Man(9)GlcNAc(2)-PP-Dol.","definition_xrefs":["MetaCyc:RXN-5471","PMID:12480927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity","termid":"GO:0004583"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.1.265","RHEA:31307"],"synonyms":[{"name":"dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl glucosyltransferase activity","type":"exact"}],"termid":"GO:0042283","terms_by_termid":{"GO:0042283":null}}


id: PBO:0039117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axin interactor, dorsalization associated","termid":"PBO:0039117"}


id: PBO:0041879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATIP antisense RNA 1","termid":"PBO:0041879"}


id: GO:0002570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of heavy chain immunoglobulin genes. N regions are found at the V-D and D-J recombinational junctions.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"},{"relation_name":"part_of","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"somatic diversification of immunoglobulin genes by N region addition","synonyms":[{"name":"somatic diversification of antibody genes by N region addition","type":"exact"}],"termid":"GO:0002570"}


id: PBO:0041865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 10","termid":"PBO:0041865"}


id: MONDO:0012755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 7 (EA7) is an exceedingly rare form of Hereditary episodic ataxia characterized by ataxia with weakness, vertigo, and dysarthria without interictal findings.","definition_xrefs":["Orphanet:209970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 7","secondary_identifiers":["SCTID:718752007","MEDGEN:383209","DOID:0050995","MESH:C567459","OMIM:611907","UMLS:C2677843","GARD:17108","icd11.foundation:1855038011"],"synonyms":[{"name":"EA7","type":"related"},{"name":"episodic ataxia, type 7","type":"related"}],"termid":"MONDO:0012755","xrefs":{"Monarch":{"xref_id":"0012755"}}}


id: PBO:0039439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and fibronectin type III domain containing 1","termid":"PBO:0039439"}


id: GO:0002193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-1 (MAML1); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:16510869","CORUM:2949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MAML1-RBP-Jkappa- ICN1 complex","synonyms":[{"name":"MAML1-CSL-ICN1","type":"exact"},{"name":"MAML1-CSL-Notch1 complex","type":"exact"},{"name":"MAML1-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0002193"}


id: PR:O94600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TELO2-interacting protein 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04677","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEL2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.13c","secondary_identifiers":["UniProtKB:O94600"],"synonyms":[{"name":"Spom972h-TTI1","type":"exact"}],"termid":"PR:O94600"}


id: PBO:0067065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 91, pseudogene","termid":"PBO:0067065"}


id: PBO:0048467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-cysteine ligase modifier subunit","termid":"PBO:0048467"}


id: PBO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ark1/Prk1 family protein kinase Ppk30","termid":"PBO:0004130"}


id: PBO:0067016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 26, pseudogene","termid":"PBO:0067016"}


id: PATO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001003 relative alternation value (obsolete PATO:0001003)","termid":"PATO:0001003"}


id: PR:P78753
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine synthetase [glutamine-hydrolyzing] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11772:SF0","OMA:SCHPO02567","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase [glutamine-hydrolyzing] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.10","secondary_identifiers":["UniProtKB:P78753"],"synonyms":[{"name":"Spom972h-ASNS","type":"exact"},{"name":"glutamine-dependent asparagine synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78753"}


id: PBO:0083466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NAP1","termid":"PBO:0083466"}


id: MONDO:0800187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing viral infections.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis, acute, infection-induced, susceptibility to","termid":"MONDO:0800174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency 83, susceptibility to viral infections","secondary_identifiers":["OMIM:613002","MEDGEN:416638","UMLS:C2751803"],"synonyms":[{"name":"IMD83","type":"exact"}],"termid":"MONDO:0800187","xrefs":{"Monarch":{"xref_id":"0800187"}}}


id: PBO:0027209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_telomeric_heterochromatin_during_horsetail_movement","termid":"PBO:0027209"}


id: MONDO:0009353
data:
  {"annotated_genes":["SJAG_01466","SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84496,84497],"is_not":false,"summary":null,"term":"MONDO:0009353"}]},"cv_name":"mondo","definition":"Homocystinuria due to methylene tetrahydrofolate reductase (MTHFR) deficiency is a metabolic disorder characterized by neurological manifestations.","definition_xrefs":["Orphanet:395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homocystinuria","termid":"MONDO:0004737"},{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"homocystinuria due to methylene tetrahydrofolate reductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:236250","UMLS:C1856061","SCTID:41797007","NANDO:1201041","GARD:2734","MEDGEN:343470","MESH:C537357"],"synonyms":[{"name":"5,10 alpha methylenetetrahydro-folate reductase deficiency","type":"related"},{"name":"5,10-alpha-methylenetetrahydro-folate reductase deficiency","type":"related"},{"name":"Homocysteinemia due to methylenetetrahydro-folate reductase deficiency","type":"related"},{"name":"Homocysteinuria due to methylenetetrahydro-folate reductase deficiency","type":"related"},{"name":"MTHFR deficiency","type":"exact"},{"name":"MTHFR deficiency, thermolabile type","type":"related"},{"name":"Methylenetetrahydro-folate reductase deficiency","type":"related"},{"name":"homocystinuria due to MTHFR deficiency","type":"related"},{"name":"homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity","type":"related"},{"name":"homocystinuria due to methylene tetrahydrofolate reductase deficiency","type":"exact"},{"name":"methylene tetrahydrofolate reductase deficiency","type":"exact"},{"name":"methylenetetrahydrofolate reductase deficiency","type":"related"}],"termid":"MONDO:0009353","terms_by_termid":{"MONDO:0009353":null},"xrefs":{"Monarch":{"xref_id":"0009353"}}}


id: GO:0042291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Hub1 hydrolase activity (obsolete GO:0042291)","synonyms":[{"name":"Hub1 hydrolase activity","type":"exact"}],"termid":"GO:0042291"}


id: GO:0000183
data:
  {"annotated_genes":["SJAG_02778","SJAG_04039","SJAG_00934","SJAG_02723","SJAG_03844","SJAG_03982","SJAG_01579","SJAG_01075"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89257,91274,103268,107316,111248,112428,113552],"is_not":false,"summary":null,"term":"GO:0000183"},{"annotations":[105811],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"The formation of heterochromatin at ribosomal DNA, characterized by the modified histone H3K9me3.","definition_xrefs":["PMID:10219245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"},{"relation_name":"part_of","term_name":"nucleolar chromatin organization","termid":"GO:1990700"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_01075":null,"SJAG_01579":null,"SJAG_02723":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null,"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromatin silencing at rDNA","type":"related"},{"name":"chromatin silencing at ribosomal DNA","type":"broad"},{"name":"heterochromatic silencing at rDNA","type":"broad"},{"name":"rDNA chromatin silencing","type":"broad"},{"name":"rDNA heterochromatin assembly","type":"exact"}],"termid":"GO:0000183","terms_by_termid":{"GO:0000183":null,"GO:0061188":null}}


id: PBO:0065385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSG11, PSG2 and PSG5 antisense RNA 1","termid":"PBO:0065385"}


id: FYPO:0000441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of antimycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to antimycin A","synonyms":[{"name":"resistance to antimycin A during mitotic cell cycle","type":"related"},{"name":"resistance to antimycin A during vegetative growth","type":"exact"},{"name":"resistant to antimycin A","type":"exact"}],"termid":"FYPO:0000441"}


id: FYPO:0007359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of heavy water (D2O) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to heavy water","synonyms":[{"name":"resistance to D2O","type":"exact"},{"name":"resistance to dideuterium oxide","type":"exact"},{"name":"resistance to heavy water during mitotic cell cycle","type":"related"},{"name":"resistance to heavy water during vegetative growth","type":"exact"},{"name":"resistant to heavy water","type":"exact"}],"termid":"FYPO:0007359"}


id: GO:0102175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxysteroid-4-alpha-carboxylate + NAD+ = a 3-oxosteroid + CO2 + NADH.","definition_xrefs":["RHEA:34775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activity","termid":"GO:0000252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activity","secondary_identifiers":["EC:1.1.1.418","MetaCyc:RXN-11928"],"termid":"GO:0102175"}


id: MONDO:0032665
data:
  {"annotated_genes":["SJAG_00886"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85272],"is_not":false,"summary":null,"term":"MONDO:0032665"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00886":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 68","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081229","MEDGEN:1648490","OMIM:618302","UMLS:C4749033"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL RECESSIVE 68","type":"related"},{"name":"MRT68","type":"related"},{"name":"Mental Retardation, Autosomal Recessive 68","type":"related"}],"termid":"MONDO:0032665","terms_by_termid":{"MONDO:0032665":null},"xrefs":{"Monarch":{"xref_id":"0032665"}}}


id: MONDO:0017675
data:
  {"annotated_genes":["SJAG_05011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"}]},"cv_name":"mondo","definition":"A palmoplantar keratosis characterized by keratoses with a \\\"raindrop\\\" pattern on the palmoplantar surface, skin lesions which may involve the whole of the palmoplantar surface, or may be more restricted in their distribution.","definition_xrefs":["DOID:0060361","Wikipedia:Palmoplantar_keratoderma#Punctate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4024851","Orphanet:307967","MEDGEN:870406","SCTID:402773000","icd11.foundation:1212361548","GARD:21297"],"synonyms":[{"name":"punctate PPK","type":"exact"},{"name":"punctate keratosis palmoplantaris","type":"exact"},{"name":"punctate palmoplantar hyperkeratosis","type":"exact"}],"termid":"MONDO:0017675","terms_by_termid":{"MONDO:0007858":null},"xrefs":{"Monarch":{"xref_id":"0017675"}}}


id: MONDO:0035321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of familial hypoaldosteronism characterized by adult onset of subnormal plasma aldosterone with elevated plasma renin activity, hyperkalemia, metabolic acidosis, and hypotension. Signs and symptoms are typically mild, and affected individuals may be clinically asymptomatic and diagnosed only after biochemical screening.","definition_xrefs":["Orphanet:556037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypoaldosteronism","termid":"MONDO:0018541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late-onset familial hypoaldosteronism","secondary_identifiers":["MEDGEN:1843290","GARD:22244","UMLS:C5680172","ICD10CM:E27.4"],"synonyms":[{"name":"Late-onset familial hyperreninemic hypoaldosteronism","type":"exact"},{"name":"Mild aldosterone synthase deficiency","type":"exact"}],"termid":"MONDO:0035321","xrefs":{"Monarch":{"xref_id":"0035321"}}}


id: GO:1901662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quinone.","definition_xrefs":["GOC:go_curators","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"quinone catabolic process","secondary_identifiers":["GO:0042378"],"synonyms":[{"name":"quinone breakdown","type":"exact"},{"name":"quinone catabolism","type":"exact"},{"name":"quinone cofactor breakdown","type":"related"},{"name":"quinone cofactor catabolic process","type":"related"},{"name":"quinone cofactor catabolism","type":"related"},{"name":"quinone cofactor degradation","type":"related"},{"name":"quinone degradation","type":"exact"}],"termid":"GO:1901662"}


id: PR:Q00619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mam2 gene.","definition_xrefs":["UniProtKB:Q00619","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone P-factor receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.04","synonyms":[{"name":"Spom972h-mam2","type":"exact"}],"termid":"PR:Q00619"}


id: GO:1902588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A plasmodesmata-mediated intercellular transport which involves another organism.","definition_xrefs":["GOC:jl","GOC:TermGenie","GO_REF:0000089"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism plasmodesmata-mediated intercellular transport (obsolete GO:1902588)","synonyms":[{"name":"multi organism plasmodesmata-mediated intercellular transport","type":"exact"}],"termid":"GO:1902588"}


id: PBO:0002080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein binding protein Sla1 family, Shd1 (predicted)","termid":"PBO:0002080"}


id: PBO:0060657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 1","termid":"PBO:0060657"}


id: PBO:0028295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dioxygenase_activity","termid":"PBO:0028295"}


id: PBO:0040913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 17","termid":"PBO:0040913"}


id: GO:0032817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"regulates","term_name":"natural killer cell proliferation","termid":"GO:0001787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell proliferation","synonyms":[{"name":"regulation of NK cell proliferation","type":"exact"}],"termid":"GO:0032817"}


id: GO:1904704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["PMID:26412237","GOC:bc","GOC:kmv","GO_REF:0000058","GOC:aruk","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell-cell junction","termid":"GO:0150107"},{"relation_name":"is_a","term_name":"regulation of protein localization to adherens junction","termid":"GO:1904702"},{"relation_name":"positively_regulates","term_name":"protein localization to adherens junction","termid":"GO:0071896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to adherens junction","synonyms":[{"name":"activation of protein localisation in cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localisation to cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localization in cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localization to cell-cell adherens junction","type":"narrow"},{"name":"positive regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"positive regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"positive regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:1904704"}


