# terms

id: MONDO:0016448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoxanthoma elasticum-like papillary dermal elastolysis (PXE-PDE) is a rare, acquired, idiopathic dermal tissue disorder characterized by numerous, asymptomatic, 2-3 mm, yellowish, non-follicular papules that tend to converge into cobblestone-like plaques which are distributed symmetrically over the posterior neck, supraclavicular region, axillae, and sometimes abdomen. Unlike PXE, these skin lesions show select elimination (absence or marked loss) of elastic fibers in the papillary dermis and there is no systemic involvement.","definition_xrefs":["Orphanet:228293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pseudoxanthoma elasticum-like papillary dermal elastolysis","secondary_identifiers":["MEDGEN:1638395","UMLS:C4049455","icd11.foundation:704601885","GARD:20588","SCTID:764105002"],"synonyms":[{"name":"PXE-PDE","type":"exact"},{"name":"PXE-like papillary dermal elastolysis","type":"exact"}],"termid":"MONDO:0016448","xrefs":{"Monarch":{"xref_id":"0016448"}}}


id: PBO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0000728"}


id: PBO:0038502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 11","termid":"PBO:0038502"}


id: GO:0007340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The discharge, by sperm, of a single, anterior secretory granule following the sperm's attachment to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents into the zona pellucida.","definition_xrefs":["PMID:11175768","PMID:21042299","PMID:3886029","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acrosome reaction","secondary_identifiers":["Wikipedia:Acrosome_reaction"],"termid":"GO:0007340"}


id: PBO:0068809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 46, pseudogene","termid":"PBO:0068809"}


id: PBO:0075370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 8","termid":"PBO:0075370"}


id: GO:0035394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-X-C motif) ligand 9.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"regulation of CXCL9 production","type":"exact"},{"name":"regulation of MIG production","type":"exact"}],"termid":"GO:0035394"}


id: PBO:0027739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip_during_cellular_response_to_salt_stress","termid":"PBO:0027739"}


id: GO:0160150
data:
  {"annotated_genes":["SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105394],"is_not":false,"summary":null,"term":"GO:0160150"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(13) in tRNA = pseudouridine(13) in tRNA.","definition_xrefs":["EC:5.4.99.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0016853","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"tRNA pseudouridine(13) synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:42540"],"termid":"GO:0160150","terms_by_termid":{"GO:0160150":null}}


id: PBO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps53 (predicted)","termid":"PBO:0000980"}


id: GO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-cis-sabinol + NAD+ = (1S,5S)-sabinone + H+ + NADH.","definition_xrefs":["EC:1.1.1.228","RHEA:18329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(+)-sabinol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03745","MetaCyc:+-SABINOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(+)-cis-sabinol dehydrogenase activity","type":"related"},{"name":"(+)-cis-sabinol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047502"}


id: PBO:0068493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 77, pseudogene","termid":"PBO:0068493"}


id: GO:0071913
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90981],"is_not":false,"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of citrate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylate secondary active transmembrane transporter activity","termid":"GO:0005371"},{"relation_name":"is_a","term_name":"citrate transmembrane transporter activity","termid":"GO:0015137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"citrate secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"citrate carrier activity","type":"exact"}],"termid":"GO:0071913","terms_by_termid":{"GO:0071913":null}}


id: RO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"RO:0002335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","termid":"RO:0002014"}


id: PBO:0038361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasitoid_of","termid":"PBO:0038361"}


id: GO:0071732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitric oxide","termid":"GO:0071731"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to reactive nitrogen species","termid":"GO:1902170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitric oxide","termid":"GO:0071732"}


id: MONDO:0015666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic dilatation of the right atrium (IDRA) is a rare congenital heart malformation of unknown etiology that is characterized by an extremely dilated right atrium, and that is usually asymptomatic and fortuitously discovered by echocardiography or chest radiography, and can be sometimes associated with other anomalies such as atrial arrhythmias (e.g. atrial flutter, atrial fibrillation, supraventricular tachycardia), severe tricuspid regurgitation, or atrial thrombus that could lead to potentially life-threatening thromboembolic complications.","definition_xrefs":["Orphanet:1677"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","termid":"MONDO:0018797"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial idiopathic dilatation of the right atrium","secondary_identifiers":["UMLS:C4274283","MEDGEN:901482","GARD:18735","SCTID:716773002"],"synonyms":[{"name":"familial idiopathic dilatation of the right atrium (disease)","type":"exact"}],"termid":"MONDO:0015666","xrefs":{"Monarch":{"xref_id":"0015666"}}}


id: GO:1900805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brevianamide F. Brevianamide F is the biosynthetic precursor of a large family of biologically active prenylated tryptophan-proline 2,5-diketopiperazines that are produced by some fungi.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:16755625","PMID:17464044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"brevianamide F biosynthetic process","secondary_identifiers":["GO:1900803"],"synonyms":[{"name":"C16H17N3O2 anabolism","type":"related"},{"name":"C16H17N3O2 biosynthesis","type":"related"},{"name":"C16H17N3O2 biosynthetic process","type":"related"},{"name":"C16H17N3O2 formation","type":"related"},{"name":"C16H17N3O2 synthesis","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride anabolism","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride biosynthesis","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride biosynthetic process","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride formation","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride synthesis","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride anabolism","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride biosynthesis","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride biosynthetic process","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride formation","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride synthesis","type":"related"},{"name":"brevianamide F anabolism","type":"exact"},{"name":"brevianamide F biosynthesis","type":"exact"},{"name":"brevianamide F formation","type":"exact"},{"name":"brevianamide F metabolic process","type":"narrow"},{"name":"brevianamide F synthesis","type":"exact"},{"name":"cyclo-(Trp-Pro) anabolism","type":"related"},{"name":"cyclo-(Trp-Pro) biosynthesis","type":"related"},{"name":"cyclo-(Trp-Pro) biosynthetic process","type":"related"},{"name":"cyclo-(Trp-Pro) formation","type":"related"},{"name":"cyclo-(Trp-Pro) synthesis","type":"related"},{"name":"cyclo-L-Trp-L-Pro anabolism","type":"related"},{"name":"cyclo-L-Trp-L-Pro biosynthesis","type":"related"},{"name":"cyclo-L-Trp-L-Pro biosynthetic process","type":"related"},{"name":"cyclo-L-Trp-L-Pro formation","type":"related"},{"name":"cyclo-L-Trp-L-Pro synthesis","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline anabolism","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline biosynthesis","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline biosynthetic process","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline formation","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline synthesis","type":"related"},{"name":"tryptophan-proline diketopiperazine anabolism","type":"related"},{"name":"tryptophan-proline diketopiperazine biosynthesis","type":"related"},{"name":"tryptophan-proline diketopiperazine biosynthetic process","type":"related"},{"name":"tryptophan-proline diketopiperazine formation","type":"related"},{"name":"tryptophan-proline diketopiperazine synthesis","type":"related"}],"termid":"GO:1900805"}


id: GO:0160129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cross-link between a protein and a DNA abasic site, forming a thiazolidine linkage between a DNA ring-opened abasic site and the alpha-amino and sulfhydryl substituents of cysteine residue of the protein.","definition_xrefs":["PMID:31235913","PMID:30554877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"protein-DNA covalent cross-linking activity","secondary_identifiers":["MetaCyc:RXN-21016"],"termid":"GO:0160129"}


id: PBO:0061595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotensin receptor 1","termid":"PBO:0061595"}


id: PR:Q7LL22
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nsk1 gene.","definition_xrefs":["UniProtKB:Q7LL22","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein nsk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.01","synonyms":[{"name":"Spom972h-nsk1","type":"exact"},{"name":"nucleolus spindle kinetochore protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q7LL22"}


id: MONDO:0018076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use.","definition_xrefs":["NCIT:C3423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculosis","secondary_identifiers":["SCTID:56717001","ICD9:017.92","MEDGEN:22513","UMLS:C0041296","ICD9:017.94","MESH:D014376","GARD:7827","icd11.foundation:2072728114","ICD9:017.96","ICD9:017.90","DOID:399","Orphanet:3389","MedDRA:10044755","ICD10CM:A15-A19","NORD:1801"],"synonyms":[{"name":"Kochs disease","type":"related"},{"name":"TB","type":"related"},{"name":"active tuberculosis","type":"narrow"},{"name":"tuberculosis disease","type":"exact"}],"termid":"MONDO:0018076","xrefs":{"Monarch":{"xref_id":"0018076"}}}


id: GO:1900845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monodictyphenone biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of monodictyphenone biosynthetic process","termid":"GO:1900843"},{"relation_name":"positively_regulates","term_name":"monodictyphenone biosynthetic process","termid":"GO:1900815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of monodictyphenone biosynthetic process","synonyms":[{"name":"upregulation of monodictyphenone biosynthetic process","type":"exact"}],"termid":"GO:1900845"}


id: GO:0102761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-eriodictyol + S-adenosyl-L-methionine = (S)-homoeriodictyol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:60948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"eriodictyol 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7753"],"termid":"GO:0102761"}


id: PBO:0034324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_developmental_potential_involving","termid":"PBO:0034324"}


id: MONDO:0001243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathological process where the blood starts to coagulate throughout the whole body. This depletes the body of its platelets and coagulation factors, and there is an increased risk of hemorrhage.","definition_xrefs":["NCIT:C2992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombophilia","termid":"MONDO:0002305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"disseminated intravascular coagulation","secondary_identifiers":["DOID:11247","ICD9:286.6","MEDGEN:41620","UMLS:C0012739","MESH:D004211","icd11.foundation:1622289887","NANDO:2200639","SCTID:67406007"],"synonyms":[{"name":"DIC","type":"exact"},{"name":"DIC, disseminated intravascular coagulation","type":"exact"},{"name":"coagulation (DIC), disseminated intravascular","type":"exact"},{"name":"consumptive coagulopathy","type":"exact"},{"name":"defibrination syndrome","type":"exact"},{"name":"diffuse or disseminated intravascular coagulation","type":"exact"},{"name":"disseminated intravascular coagulation","type":"exact"},{"name":"disseminated intravascular coagulation (DIC)","type":"exact"},{"name":"intravascular coagulation (DIC), disseminated","type":"exact"}],"termid":"MONDO:0001243","xrefs":{"Monarch":{"xref_id":"0001243"}}}


id: MOD:00329
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a glutamic acid residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["Unimod:436#E","PubMed:11139583","PubMed:11980497","RESID:AA0324","PubMed:11821421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyheme-L-glutamate ester","synonyms":[{"name":"5-hydroxymethyl protoporphyrin IX 5-glutamate ester","type":"exact"},{"name":"BINDING Heme (covalent; via 1 link)","type":"exact"},{"name":"Hydroxyheme","type":"related"},{"name":"[3-[(S)-(4-amino-4-carboxy)butanoyloxymethyl]-7,12-diethenyl-8,13,17-trimethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"cytochrome P450 CYP4A family heme cofactor","type":"exact"},{"name":"hydroxyheme","type":"related"},{"name":"hydroxyheme-L-glutamate ester","type":"exact"}],"termid":"MOD:00329"}


id: MONDO:0006068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma of the pituitary gland that produces corticotropin. The vast majority of cases are associated with Cushing disease. Clinical manifestations include truncal obesity with thin extremities, thinning of the skin, osteoporosis, and a tendency to bruise easily. Silent or hormonally non-functioning ACTH producing adenomas have also been described. They produce symptoms of a mass-related lesion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gland adenoma","termid":"MONDO:0006373"},{"relation_name":"is_a","term_name":"ACTH-producing pituitary gland neoplasm","termid":"MONDO:0045058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-producing pituitary gland adenoma","secondary_identifiers":["MEDGEN:266291","NCIT:C7462","UMLS:C1306214","EFO:1000066"],"synonyms":[{"name":"ACTH producing pituitary gland adenoma","type":"exact"},{"name":"ACTH secreting adenoma of pituitary","type":"exact"},{"name":"ACTH secreting adenoma of the pituitary","type":"exact"},{"name":"ACTH-producing pituitary adenoma","type":"exact"},{"name":"ACTH-producing pituitary gland adenoma","type":"exact"},{"name":"ACTH-secreting adenoma of pituitary","type":"exact"},{"name":"ACTH-secreting adenoma of pituitary gland","type":"exact"},{"name":"ACTH-secreting adenoma of the pituitary","type":"exact"},{"name":"ACTH-secreting adenoma of the pituitary gland","type":"exact"},{"name":"ACTHoma","type":"exact"},{"name":"Corticotropinoma","type":"exact"},{"name":"adrenocorticotropin producing adenoma of pituitary","type":"exact"},{"name":"adrenocorticotropin producing adenoma of pituitary gland","type":"exact"},{"name":"adrenocorticotropin producing adenoma of the pituitary","type":"exact"},{"name":"adrenocorticotropin producing adenoma of the pituitary gland","type":"exact"},{"name":"adrenocorticotropin producing pituitary adenoma","type":"exact"},{"name":"adrenocorticotropin producing pituitary gland adenoma","type":"exact"},{"name":"adrenocorticotropin secreting adenoma of pituitary","type":"exact"},{"name":"adrenocorticotropin secreting adenoma of pituitary gland","type":"exact"},{"name":"adrenocorticotropin secreting adenoma of the pituitary","type":"exact"},{"name":"adrenocorticotropin secreting adenoma of the pituitary gland","type":"exact"},{"name":"adrenocorticotropin secreting pituitary adenoma","type":"exact"},{"name":"adrenocorticotropin secreting pituitary gland adenoma","type":"exact"},{"name":"corticotroph adenoma","type":"exact"},{"name":"corticotropic adenoma","type":"exact"},{"name":"corticotropin secreting adenoma of the pituitary","type":"exact"},{"name":"corticotropin secreting pituitary gland adenoma","type":"exact"},{"name":"pituitary ACTH secreting adenoma","type":"exact"},{"name":"pituitary ACTH-secreting adenoma","type":"exact"},{"name":"pituitary corticotropin secreting adenoma","type":"exact"},{"name":"pituitary gland ACTH-secreting adenoma","type":"exact"}],"termid":"MONDO:0006068","xrefs":{"Monarch":{"xref_id":"0006068"}}}


id: PBO:0028601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_nitrosative_stress","termid":"PBO:0028601"}


id: GO:0039534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the series of the MDA-5 signaling pathway.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of MDA-5 signaling pathway","termid":"GO:0039533"},{"relation_name":"negatively_regulates","term_name":"MDA-5 signaling pathway","termid":"GO:0039530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of MDA-5 signaling pathway","synonyms":[{"name":"negative regulation of IFIH1 signaling pathway","type":"exact"},{"name":"negative regulation of MDA-5 signalling pathway","type":"exact"},{"name":"negative regulation of MDA5 signaling pathway","type":"exact"},{"name":"negative regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:0039534"}


id: GO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the LSU-rRNA and the 4.5S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002105"}


id: GO:0061159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of bipolar intracellular organization or cell growth patterns that contribute to cell morphogenesis. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"},{"relation_name":"part_of","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of bipolar cell polarity involved in cell morphogenesis","termid":"GO:0061159"}


id: PBO:0029515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_normal_cell_morphology","termid":"PBO:0029515"}


id: PBO:0030887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_recombination_during_vegetative_growth","termid":"PBO:0030887"}


id: GO:0015912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of short-chain fatty acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"short-chain fatty acid transport","termid":"GO:0015912"}


id: PBO:0089466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane sensing transcription coactivator, ankyrin repeat containing Mga2","termid":"PBO:0089466"}


id: MONDO:0008257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet responsiveness to adrenaline, depressed","secondary_identifiers":["MEDGEN:358151","UMLS:C1868200","OMIM:173580"],"synonyms":[{"name":"platelet responsiveness to adrenaline, depressed","type":"exact"}],"termid":"MONDO:0008257","xrefs":{"Monarch":{"xref_id":"0008257"}}}


id: PBO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine accumulation causes a defect in purine biosynthesis","termid":"PBO:0001000"}


id: PBO:0045653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 11","termid":"PBO:0045653"}


id: GO:0007345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of an embryo and its organized structures.","definition_xrefs":["ISBN:0070524300","GOC:ems","ISBN:0140512888"],"gene_count":0,"genotype_count":0,"name":"obsolete embryogenesis and morphogenesis (obsolete GO:0007345)","synonyms":[{"name":"embryogenesis and morphogenesis","type":"exact"}],"termid":"GO:0007345"}


id: GO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal.","definition_xrefs":["EC:1.2.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"retinal dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-5696101","RHEA:16177","Reactome:R-HSA-5362522","MetaCyc:RETINAL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"cytosolic retinal dehydrogenase activity","type":"related"},{"name":"retinal:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0001758"}


id: PBO:0111774
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXS family protein","termid":"PBO:0111774"}


id: GO:0072243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric nephron epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The metanephric nephron epithelium is a tissue that covers the surface of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"is_a","term_name":"metanephric epithelium development","termid":"GO:0072207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron epithelium development","termid":"GO:0072243"}


id: SO:1001279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding stimulatory region, the stem-loop secondary structural element is downstream of the redefined region.","definition_xrefs":["SO:ke","PMID:12519954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_stem_loop_structure","synonyms":[{"name":"three prime stem loop structure","type":"exact"}],"termid":"SO:1001279"}


id: PBO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein","termid":"PBO:0061000"}


id: GO:1904106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a microvillus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","GOC:kmv","PMID:25335890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microvillus","synonyms":[{"name":"protein localisation in microvillus","type":"exact"},{"name":"protein localisation to microvillus","type":"exact"},{"name":"protein localization in microvillus","type":"exact"}],"termid":"GO:1904106"}


id: PBO:0089223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh2","termid":"PBO:0089223"}


id: GO:0002272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature plasmacytoid dendritic cell acquires the specialized features of a mature plasmacytoid dendritic cell contributing to an immune response.","definition_xrefs":["GOC:add","PMID:15990333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmacytoid dendritic cell activation involved in immune response","termid":"GO:0002271"},{"relation_name":"is_a","term_name":"plasmacytoid dendritic cell differentiation","termid":"GO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell differentiation involved in immune response","synonyms":[{"name":"plasmacytoid dendritic cell differentiation during immune response","type":"related"}],"termid":"GO:0002272"}


id: GO:0043196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Non-terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"varicosity","termid":"GO:0043196"}


id: MONDO:0008599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trigeminal neuralgia is a nerve disorder that causes a stabbing or electric-shock-like pain in parts of the face. The pain lasts a few seconds to a few minutes, and usually on only one side of the face. It can also cause muscle spasms in the face the same time as the pain. The pain may result from a blood vessel pressing against the trigeminal nerve (the nerve that carries pain, feeling, and other sensations from the brain to the skin of theface), as a complication of multiple sclerosis, or due to compression of the nerve by a tumor or cyst. In some cases, the cause is unknown. Treatment options include medicines, surgery, and complementary approaches.","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"trigeminal nerve disorder","termid":"MONDO:0003543"},{"relation_name":"is_a","term_name":"cranial neuralgia","termid":"MONDO:0016374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"trigeminal neuralgia","secondary_identifiers":["DOID:12098","EFO:1001219","GARD:7805","MedDRA:10044652","ICD10CM:G50.0","NORD:1791","Orphanet:221091","ICD9:350.1","SCTID:31681005","MESH:D014277","MEDGEN:21683","icd11.foundation:1803581281","OMIM:190400","UMLS:C0040997"],"synonyms":[{"name":"Tic douloureux","type":"related"},{"name":"neuralgia of trigeminal nerve","type":"exact"},{"name":"trifacial neuralgia","type":"exact"},{"name":"trifocal neuralgia","type":"exact"},{"name":"trigeminal nerve neuralgia","type":"exact"},{"name":"trigeminal neuralgia","type":"exact"}],"termid":"MONDO:0008599","xrefs":{"Monarch":{"xref_id":"0008599"}}}


id: FYECO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which MMS (methyl methanesulfonate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MMS","synonyms":[{"name":"methyl methanesulfonate added","type":"exact"}],"termid":"FYECO:0000211"}


id: PBO:0003664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc15","termid":"PBO:0003664"}


id: FYPO:0006261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 36 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K36 methylation during vegetative growth","termid":"FYPO:0002919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K36 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K36 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K36me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K36 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K36 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0006261"}


id: PBO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substrate_is","termid":"PBO:0000015"}


id: GO:0003359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation","termid":"GO:0003357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment","synonyms":[{"name":"norepinephrine secreting neuron fate commitment","type":"exact"}],"termid":"GO:0003359"}


id: PBO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad16 homolog ATP-dependent DNA helicase/ ubiquitin protein ligase E3 Rhp16","termid":"PBO:0018105"}


id: MONDO:0015149
data:
  {"annotated_genes":["SJAG_01848","SJAG_04325","SJAG_04292","SJAG_04506","SJAG_05289","SJAG_00199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011489"},{"annotations":[84406,84407,84408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012256"},{"annotations":[85985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012928"},{"annotations":[84854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014282"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_01848":null,"SJAG_04292":null,"SJAG_04325":null,"SJAG_04506":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"pure hereditary spastic paraplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:102012","MEDGEN:581445","GARD:19822","NANDO:1200053","UMLS:C0393555","SCTID:230260007"],"synonyms":[{"name":"Pure HSP","type":"exact"},{"name":"Pure SPG","type":"exact"},{"name":"Pure familial spastic paraplegia","type":"exact"},{"name":"uncomplicated HSP","type":"exact"},{"name":"uncomplicated SPG","type":"exact"},{"name":"uncomplicated familial spastic paraplegia","type":"exact"},{"name":"uncomplicated hereditary spastic paraplegia","type":"exact"}],"termid":"MONDO:0015149","terms_by_termid":{"MONDO:0011489":null,"MONDO:0012256":null,"MONDO:0012928":null,"MONDO:0014282":null},"xrefs":{"Monarch":{"xref_id":"0015149"}}}


id: PBO:0061756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"out at first homolog","termid":"PBO:0061756"}


id: GO:0048732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gland development","termid":"GO:0048732"}


id: GO:0140311
data:
  {"annotated_genes":["SJAG_01993","SJAG_02266","SJAG_02576","SJAG_02857","SJAG_02474","SJAG_00436","SJAG_00145","SJAG_04873","SJAG_00822","SJAG_00642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86847,89422,94356,94419,99673,99725,104160,106576,110862,113454],"is_not":false,"summary":null,"term":"GO:0140311"}]},"cv_name":"molecular_function","definition":"Binding to a protein to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:1493333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00436":null,"SJAG_00642":null,"SJAG_00822":null,"SJAG_01993":null,"SJAG_02266":null,"SJAG_02474":null,"SJAG_02576":null,"SJAG_02857":null,"SJAG_04873":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"protein sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140311","terms_by_termid":{"GO:0140311":null}}


id: PBO:0041565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 85","termid":"PBO:0041565"}


id: GO:0033629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"negatively_regulates","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell adhesion mediated by integrin","synonyms":[{"name":"negative regulation of cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033629"}


id: MONDO:0011368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary carcinoma of the thyroid gland measuring 10mm or less in diameter. The survival rates of patients with this type of carcinoma are the same with those of the normal population.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial papillary or follicular thyroid carcinoma","termid":"MONDO:0017895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary thyroid Microcarcinoma","secondary_identifiers":["NCIT:C46004","OMIM:603744","UMLS:C1709457","MEDGEN:313563","ICDO:8341/3","MESH:C563277","GARD:15358"],"synonyms":[{"name":"papillary Microcarcinoma of the thyroid","type":"exact"},{"name":"papillary Microcarcinoma of the thyroid gland","type":"exact"},{"name":"papillary thyroid Microcarcinoma","type":"exact"},{"name":"papillary thyroid gland Microcarcinoma","type":"exact"},{"name":"thyroid gland papillary Microcarcinoma","type":"exact"}],"termid":"MONDO:0011368","xrefs":{"Monarch":{"xref_id":"0011368"}}}


id: GO:0046729
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable empty viral capsid produced during the assembly of viruses.","definition_xrefs":["ISBN:1555811272","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral procapsid","termid":"GO:0046729"}


id: PBO:0070956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 11","termid":"PBO:0070956"}


id: PBO:0007850
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of nuclear proteasome","termid":"PBO:0007850"}


id: PBO:0087626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo; capable of binding Q/N rich proteins and mediating their folding","termid":"PBO:0087626"}


id: PBO:0036213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ubiquitinated_protein_absent_from_cell_during_vegetative_growth","termid":"PBO:0036213"}


id: PBO:0079276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription termination factor 2","termid":"PBO:0079276"}


id: PBO:0057686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1275","termid":"PBO:0057686"}


id: FYPO:0001792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body duplication does not occur, leaving the cell with a single spindle pole body later in the cell cycle than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body duplication","termid":"FYPO:0001791"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abolished mitotic spindle pole body duplication","synonyms":[{"name":"abolished mitotic SPB duplication","type":"exact"},{"name":"abolished mitotic spindle pole body duplication during vegetative growth","type":"exact"},{"name":"abolished spindle pole body duplication during mitotic cell cycle","type":"related"},{"name":"mitotic spindle pole body duplication abolished","type":"exact"},{"name":"single mitotic spindle pole body","type":"related"}],"termid":"FYPO:0001792"}


id: PBO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 (predicted)","termid":"PBO:0001157"}


id: FYPO:0007943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal during the meiotic cell cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromatin organization during meiotic cell cycle","termid":"FYPO:0007943"}


id: PBO:0004819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit l44 (predicted)","termid":"PBO:0004819"}


id: GO:1901968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polynucleotide 3'-phosphatase activity.","definition_xrefs":["PMID:23316050","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polynucleotide 3'-phosphatase activity","synonyms":[{"name":"regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"}],"termid":"GO:1901968"}


id: PBO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit p30 (predicted)","termid":"PBO:0000967"}


id: FYPO:0007656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at transcription start sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:33511417","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nucleosome occupancy","termid":"FYPO:0007655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased nucleosome occupancy at transcription start site","synonyms":[{"name":"increased nucleosome occupancy at TSS","type":"exact"},{"name":"increased nucleosome occupancy at transcription start site during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at transcription start site during vegetative growth","type":"exact"}],"termid":"FYPO:0007656"}


id: GO:0019650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose into butanediol; effected by some members of the Enterobacteriaceae, e.g. Enterobacter, Erwinia, Klebsiella, and Serratia.","definition_xrefs":["GOC:nr","ISBN:0198506732","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"},{"relation_name":"is_a","term_name":"butanediol metabolic process","termid":"GO:0034077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"glycolytic fermentation to butanediol","secondary_identifiers":["Wikipedia:Butanediol_fermentation","GO:0030646"],"synonyms":[{"name":"butanediol fermentation","type":"exact"},{"name":"glucose catabolic process to butanediol","type":"exact"},{"name":"glucose fermentation to butanediol","type":"exact"}],"termid":"GO:0019650"}


id: PBO:0039975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4C","termid":"PBO:0039975"}


id: PBO:0082657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; involved intranscription initiation and elongation and in mRNA degradation; conserved lysine in human homolog of Not5p and Not3p is mutated in cancers","termid":"PBO:0082657"}


id: GO:0031522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex involved in the translocation of proteins across the cytoplasmic membrane. In Gram-negative bacteria, Sec-translocated proteins are subsequently secreted via the type II, IV, or V secretion systems. Sec complex components include SecA, D, E, F, G, Y and YajC.","definition_xrefs":["GOC:mtg_sensu","PMID:15223057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cell envelope Sec protein transport complex","synonyms":[{"name":"Sec complex","type":"broad"},{"name":"Sec secretion complex","type":"narrow"},{"name":"Sec translocation complex","type":"narrow"},{"name":"plasma membrane Sec complex","type":"related"}],"termid":"GO:0031522"}


id: GO:0045805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eclosion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eclosion","termid":"GO:0007563"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eclosion","synonyms":[{"name":"activation of eclosion","type":"narrow"},{"name":"stimulation of eclosion","type":"narrow"},{"name":"up regulation of eclosion","type":"exact"},{"name":"up-regulation of eclosion","type":"exact"},{"name":"upregulation of eclosion","type":"exact"}],"termid":"GO:0045805"}


id: GO:0050571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-D-glucitol + NADP+ = 1,5-anhydro-D-fructose + H+ + NADPH.","definition_xrefs":["RHEA:20665","EC:1.1.1.263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose reductase activity","secondary_identifiers":["KEGG_REACTION:R05682","MetaCyc:1.1.1.263-RXN"],"synonyms":[{"name":"1,5-anhydro-D-glucitol:NADP+ oxidoreductase activity","type":"related"},{"name":"AF reductase activity","type":"related"}],"termid":"GO:0050571"}


id: GO:0018172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of protein tyrosine to peptidyl-L-3',4',5'-dihydroxyphenylalanine.","definition_xrefs":["RESID:AA0263"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-3',4',5'-trihydroxyphenylalanine biosynthetic process from peptidyl-tyrosine (obsolete GO:0018172)","synonyms":[{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018172"}


id: SO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence used experimentally to detect the presence or absence of a complementary nucleic acid.","direct_ancestors":[{"relation_name":"is_a","term_name":"probe","termid":"SO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microarray_oligo","synonyms":[{"name":"microarray oligo","type":"exact"},{"name":"microarray oligonucleotide","type":"exact"}],"termid":"SO:0000328"}


id: PBO:0003356
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human SRPK1","termid":"PBO:0003356"}


id: MONDO:0003401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:C6209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"childhood endodermal sinus tumor","termid":"MONDO:0003400"},{"relation_name":"is_a","term_name":"childhood central nervous system germ cell tumor","termid":"MONDO:0003750"},{"relation_name":"is_a","term_name":"yolk sac tumor of central nervous system","termid":"MONDO:0016739"},{"relation_name":"is_a","term_name":"central nervous system nongerminomatous germ cell tumor","termid":"MONDO:0020574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system endodermal sinus tumor","secondary_identifiers":["MEDGEN:234604","UMLS:C1377613","DOID:5343"],"synonyms":[{"name":"central nervous system endodermal sinus tumor","type":"exact"},{"name":"central nervous system yolk Sac tumor","type":"broad"},{"name":"central nervous system yolk Sac tumour","type":"broad"},{"name":"central nervous system yolk sac tumor","type":"broad"},{"name":"central nervous system yolk sac tumour","type":"broad"},{"name":"childhood central nervous system endodermal sinus neoplasm","type":"exact"},{"name":"childhood central nervous system endodermal sinus tumor","type":"exact"},{"name":"childhood central nervous system endodermal sinus tumour","type":"exact"},{"name":"childhood central nervous system yolk Sac neoplasm","type":"broad"},{"name":"childhood central nervous system yolk Sac tumor","type":"broad"},{"name":"childhood central nervous system yolk Sac tumour","type":"broad"},{"name":"paediatric central nervous system endodermal sinus neoplasm","type":"exact"},{"name":"paediatric central nervous system yolk Sac neoplasm","type":"broad"},{"name":"paediatric central nervous system yolk Sac tumour","type":"broad"},{"name":"pediatric central nervous system endodermal sinus neoplasm","type":"exact"},{"name":"pediatric central nervous system yolk Sac neoplasm","type":"broad"},{"name":"pediatric central nervous system yolk Sac tumor","type":"broad"},{"name":"yolk Sac tumor of the CNS","type":"broad"},{"name":"yolk Sac tumour of the CNS","type":"broad"}],"termid":"MONDO:0003401","xrefs":{"Monarch":{"xref_id":"0003401"}}}


id: GO:0071849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:0071849)","termid":"GO:0071849"}


id: GO:0102348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: behenoyl-CoA + NADP = trans-2-docosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-docosan-2-enoyl-CoA reductase activity (obsolete GO:0102348)","termid":"GO:0102348"}


id: GO:0006518
data:
  {"annotated_genes":["SJAG_04032","SJAG_01430","SJAG_00988","SJAG_00792","SJAG_01351","SJAG_02599","SJAG_01088","SJAG_01004","SJAG_04031","SJAG_03494","SJAG_00181","SJAG_00469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91509],"is_not":false,"summary":null,"term":"GO:0006518"},{"annotations":[93301],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043041"},{"annotations":[93311,93303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[92506,96210,117303,107586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[93257],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[100230,113584,104916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043171"},{"annotations":[104557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01351":null,"SJAG_01430":null,"SJAG_02599":null,"SJAG_03494":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide metabolism","type":"exact"}],"termid":"GO:0006518","terms_by_termid":{"GO:0006518":null,"GO:0006750":null,"GO:0019290":null,"GO:0031169":null,"GO:0043041":null,"GO:0043171":null,"GO:1905569":null}}


id: GO:0060646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell of the mammary placode becomes an internal epithelial cell of the mammary gland bud. Internal cells are small and of irregular shape.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in mammary gland bud morphogenesis","termid":"GO:0060643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal mammary gland bud epithelial cell differentiation","termid":"GO:0060646"}


id: GO:2000862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrogen secretion","termid":"GO:2000861"},{"relation_name":"negatively_regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrogen secretion","synonyms":[{"name":"negative regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000862"}


id: MONDO:0002999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor arising from the central nervous system. It is composed of uniform cells resembling primitive germ cells. These cells have large, vesicular nuclei, prominent nucleoli and a clear, glycogen-rich cytoplasm. Additional features are lymphoid or lymphoplasmacytic infiltrates and, less frequently, scattered syncytiotrophoblastic giant cells. (Adapted from WHO)","definition_xrefs":["NCIT:C7009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"extragonadal germinoma","termid":"MONDO:0015935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system germinoma","secondary_identifiers":["MEDGEN:232242","UMLS:C1333813","DOID:4438"],"synonyms":[{"name":"central nervous system germinoma","type":"exact"},{"name":"central nervous system germinoma (disease)","type":"exact"},{"name":"germinoma of CNS","type":"exact"},{"name":"germinoma of central nervous system","type":"exact"},{"name":"germinoma of the CNS","type":"exact"},{"name":"germinoma of the central nervous system","type":"exact"},{"name":"intracranial germinoma","type":"related"}],"termid":"MONDO:0002999","xrefs":{"Monarch":{"xref_id":"0002999"}}}


id: PBO:0068494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 78, pseudogene","termid":"PBO:0068494"}


id: GO:0050152
data:
  {"annotated_genes":["SJAG_02276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94150],"is_not":false,"summary":null,"term":"GO:0050152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a monoamide of a dicarboxylic acid + H2O = a dicarboxylate + NH3.","definition_xrefs":["MetaCyc:OMEGA-AMIDASE-RXN","EC:3.5.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"omega-amidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:11716"],"synonyms":[{"name":"alpha-keto acid-omega-amidase activity","type":"related"},{"name":"omega-amidodicarboxylate amidohydrolase activity","type":"related"},{"name":"w-amidase activity","type":"exact"}],"termid":"GO:0050152","terms_by_termid":{"GO:0050152":null}}


id: PBO:0044788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 1 and alpha 3, variable copy number locus","termid":"PBO:0044788"}


id: PBO:0069530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 799, pseudogene","termid":"PBO:0069530"}


id: MONDO:0004186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare self-limiting, rapidly growing, non-encapsulated benign neoplasm that arises from the cranium. This is an osteolytic lesion. It is characterized by the presence of plump spindle-shaped fibroblasts, multinucleated osteoclast-like giant cells, chronic inflammatory infiltrate, red blood cell extravasation, and high mitotic activity.","definition_xrefs":["NCIT:C27248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nodular fasciitis","termid":"MONDO:0004187"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranial nodular fasciitis","secondary_identifiers":["DOID:7326","MEDGEN:272511","UMLS:C1333162"],"synonyms":[{"name":"cranial nodular fasciitis","type":"exact"},{"name":"cranial pseudosarcomatous fasciitis","type":"exact"}],"termid":"MONDO:0004186","xrefs":{"Monarch":{"xref_id":"0004186"}}}


id: MONDO:0014026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital stationary night blindness in which the cause of the disease is a mutation in the LRIT3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"},{"relation_name":"is_a","term_name":"LRIT3-related retinopathy","termid":"MONDO:1040035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital stationary night blindness 1F","secondary_identifiers":["GARD:15899","DOID:0110864","OMIM:615058","UMLS:C3554399","MEDGEN:767313"],"synonyms":[{"name":"CSNB1F","type":"exact"},{"name":"LRIT3 congenital stationary night blindness","type":"exact"},{"name":"congenital stationary night blindness 1F autosomal recessive","type":"exact"},{"name":"congenital stationary night blindness caused by mutation in LRIT3","type":"exact"},{"name":"congenital stationary night blindness type 1F","type":"exact"},{"name":"night blindness, congenital stationary (complete), 1F, autosomal recessive","type":"exact"},{"name":"night blindness, congenital stationary, type 1F","type":"related"}],"termid":"MONDO:0014026","xrefs":{"Monarch":{"xref_id":"0014026"}}}


id: MONDO:0010232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intestinal pseudo-obstruction is a condition characterized by impairment of the muscle contractions that move food through the digestive tract. The condition may arise from abnormalities of the gastrointestinal muscles themselves (myogenic) or from problems with the nerves that control the muscle contractions (neurogenic). When intestinal pseudo-obstruction occurs by itself, it is called primary or idiopathic (unknown cause) intestinal pseudo-obstruction. The disorder can also develop as a complication of another medical condition; in these cases, it is called secondary intestinal pseudo-obstruction. Individuals with this condition have symptoms that resemble those of an intestinal blockage (obstruction) but without any obstruction. It may be acute or chronic and is characterized by the presence of dilation of the bowel on imaging. The causes may be unknown or due to alterations (mutations) in the FLNA gene, other genes or are secondary to other conditions. It may be inherited in some cases. Intestinal pseudoobstruction neuronal chronic idiopathic X-linked is caused by alterations (mutations) in the FLNA gene which is located in the X chromosome. There is no specific treatment but several medications and procedures may be used to treat the symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital short bowel syndrome","termid":"MONDO:0014097"},{"relation_name":"is_a","term_name":"chronic intestinal pseudoobstruction","termid":"MONDO:0017574"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal pseudoobstruction, neuronal, chronic idiopathic, X-linked","secondary_identifiers":["UMLS:C2746068","GARD:3017","MEDGEN:412536","OMIM:300048","MESH:C535532","DOID:0080681"],"synonyms":[{"name":"CIIP","type":"related"},{"name":"CIIP X-linked","type":"related"},{"name":"CIIPX","type":"related"},{"name":"Ciip, X-linked","type":"related"},{"name":"Ipox","type":"related"},{"name":"congenital idiopathic intestinal pseudoobstruction","type":"related"},{"name":"congenital short bowel syndrome, X-linked","type":"related"},{"name":"congenital short bowel syndrome, X-linked recessive","type":"exact"},{"name":"intestinal pseudoobstruction neuronal chronic idiopathic X-linked","type":"related"},{"name":"intestinal pseudoobstruction, neuronal, X-linked recessive","type":"exact"},{"name":"intestinal pseudoobstruction, neuronal, chronic idiopathic, X-linked","type":"exact"},{"name":"intestinal pseudoobstruction, neuronal, chronic idiopathic, with central nervous system involvement","type":"related"}],"termid":"MONDO:0010232","xrefs":{"Monarch":{"xref_id":"0010232"}}}


id: FYPO:0003233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin islands is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin island during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0003233"}


id: MONDO:0700279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of spastic cerebral palsy affecting three limbs; this could be both arms and a leg, or both legs and an arm. In some instances, it has referred to one upper and one lower extremity and the face.","definition_xrefs":["SCTID:702320006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spastic cerebral palsy","termid":"MONDO:0000396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic triplegia","synonyms":[{"name":"spastic triplegic","type":"exact"},{"name":"triplegia spastic","type":"exact"},{"name":"triplegic CP","type":"exact"},{"name":"triplegic cerebral palsy","type":"exact"},{"name":"triplegic spastic","type":"exact"},{"name":"triplegic spasticity","type":"exact"}],"termid":"MONDO:0700279","xrefs":{"Monarch":{"xref_id":"0700279"}}}


id: PBO:0070662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 33","termid":"PBO:0070662"}


id: PBO:0035885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-asymmetric_mitochondrial_aggregation","termid":"PBO:0035885"}


id: GO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for carbon-nitrogen ligases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-nitrogen ligase activity (obsolete GO:0016883)","synonyms":[{"name":"other carbon-nitrogen ligase activity","type":"exact"}],"termid":"GO:0016883"}


id: PBO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Mra1","termid":"PBO:0001426"}


id: FYPO:0000536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein secretion during vegetative growth","synonyms":[{"name":"abnormal protein secretion during mitotic cell cycle","type":"related"},{"name":"protein secretion: abnormal","type":"related"}],"termid":"FYPO:0000536"}


id: PBO:0049459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2","termid":"PBO:0049459"}


id: FYPO:0002043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA replication","termid":"FYPO:0001133"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal premeiotic DNA replication","synonyms":[{"name":"abnormal premeiotic DNA synthesis","type":"related"},{"name":"normal meiotic DNA replication","type":"related"},{"name":"normal meiotic DNA synthesis","type":"related"}],"termid":"FYPO:0002043"}


id: MONDO:1012922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any centronuclear myopathy that occurs in dogs due to a mutation in the DNM2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, dog","termid":"MONDO:1010918"},{"relation_name":"is_a","term_name":"centronuclear myopathy, non-human animal","termid":"MONDO:1012963"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centronuclear myopathy, DNM2-related, dog","secondary_identifiers":["OMIA:002534-9615"],"synonyms":[{"name":"ADCNM","type":"exact"},{"name":"autosomal dominant centronuclear myopathy","type":"related"},{"name":"centronuclear myopathy 1, DNM2-related, dog","type":"exact"}],"termid":"MONDO:1012922","xrefs":{"Monarch":{"xref_id":"1012922"}}}


id: PBO:0083507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CCC2/YDR270W","termid":"PBO:0083507"}


id: PBO:0091222
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoLipase B homolog","termid":"PBO:0091222"}


id: PBO:0048045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 3","termid":"PBO:0048045"}


id: PBO:0082639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug3p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082639"}


id: PBO:0012610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase Nmt1","termid":"PBO:0012610"}


id: GO:0030704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the vitelline membrane portion of the egg shell, a rigid structure required to maintain the shape of the egg.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"egg coat formation","termid":"GO:0035803"},{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"vitelline membrane formation","termid":"GO:0030704"}


id: PBO:0056474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine adenosyltransferase 2 non-catalytic beta subunit","termid":"PBO:0056474"}


id: PR:O94659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nog1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.01c","synonyms":[{"name":"Spom972h-nog1","type":"exact"}],"termid":"PR:O94659"}


id: MONDO:0014729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the MAG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 75","secondary_identifiers":["GARD:17813","DOID:0110820","MEDGEN:896387","OMIM:616680","Orphanet:459056","UMLS:C4225250"],"synonyms":[{"name":"MAG hereditary spastic paraplegia","type":"exact"},{"name":"SPG75","type":"exact"},{"name":"autosomal recessive spastic paraplegia 75","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 75","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in MAG","type":"exact"},{"name":"hereditary spastic paraplegia type 75","type":"exact"},{"name":"spastic paraplegia 75, autosomal recessive","type":"exact"}],"termid":"MONDO:0014729","xrefs":{"Monarch":{"xref_id":"0014729"}}}


id: GO:0120057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of small intestinal transit","synonyms":[{"name":"regulation of small bowel transit","type":"exact"},{"name":"regulation of small intestine transit","type":"exact"}],"termid":"GO:0120057"}


id: PBO:0028259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3K9me_binding","termid":"PBO:0028259"}


id: PBO:0086990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of translation initiation; binds eIF4G through its RGG domain and inhibits recruitment of the preinitiation complex; also contains an Lsm domain; may have a role in RNA processing; overproduction suppresses null mutation in clathrin heavy chain gene CHC1; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0086990"}


id: PBO:0034766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1p ubiquitin ligase complex Npl4 (predicted)","termid":"PBO:0034766"}


id: MONDO:0030732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 69","secondary_identifiers":["MEDGEN:1811285","OMIM:619826","DOID:0070568","UMLS:C5676960"],"synonyms":[{"name":"SPGF69","type":"exact"},{"name":"spermatogenic failure 69","type":"exact"}],"termid":"MONDO:0030732","xrefs":{"Monarch":{"xref_id":"0030732"}}}


id: PBO:0069520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 789, pseudogene","termid":"PBO:0069520"}


id: FYPO:0004332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation begins later than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein degradation during mitosis","synonyms":[{"name":"delayed onset of protein breakdown during mitosis","type":"exact"},{"name":"delayed onset of protein catabolic process during mitosis","type":"exact"},{"name":"delayed onset of protein catabolism during mitosis","type":"exact"},{"name":"delayed onset of protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"delayed onset of protein degradation during mitotic M phase","type":"related"},{"name":"delayed onset of protein degradation during mitotic nuclear division","type":"exact"},{"name":"delayed protein degradation during mitosis","type":"exact"}],"termid":"FYPO:0004332"}


id: FYPO:0006799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nuclear MIS12/MIND complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:29180432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear MIS12/MIND complex binding","synonyms":[{"name":"abolished nuclear MIS12/MIND complex binding during mitotic cell cycle","type":"related"},{"name":"abolished nuclear MIS12/MIND complex binding during vegetative growth","type":"exact"},{"name":"nuclear MIS12/MIND complex binding abolished","type":"exact"}],"termid":"FYPO:0006799"}


id: FYPO:0004325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 5-fluorouracil. Cells stop growing (and may die) at a concentration of 5-fluorouracil that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to 5-fluorouracil","synonyms":[{"name":"hypersensitive to 5-fluorouracil","type":"exact"},{"name":"sensitive to 5-FU","type":"exact"},{"name":"sensitive to 5-fluorouracil during mitotic cell cycle","type":"related"},{"name":"sensitive to 5-fluorouracil during vegetative growth","type":"exact"}],"termid":"FYPO:0004325"}


id: MONDO:0006415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete small intestinal adenocarcinoma (obsolete MONDO:0006415)","termid":"MONDO:0006415","xrefs":{"Monarch":{"xref_id":"0006415"}}}


id: MONDO:0016328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fatty acid oxidation and ketogenesis disorder with hypertrophic cardiomyopathy (obsolete MONDO:0016328)","secondary_identifiers":["Orphanet:217591"],"termid":"MONDO:0016328","xrefs":{"Monarch":{"xref_id":"0016328"}}}


id: PR:O42888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aldo-keto reductase family 1 member E1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C8E4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.04","secondary_identifiers":["UniProtKB:O42888"],"synonyms":[{"name":"Spom972h-Akr1e1","type":"exact"}],"termid":"PR:O42888"}


id: GO:0048664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"neuron fate commitment","termid":"GO:0048663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate determination","termid":"GO:0048664"}


id: GO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a neuron cell soma closest to the point where the basilar dendrite emerges.","definition_xrefs":["NIF_Subcellular:sao1186862860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal pole of neuron","termid":"GO:0044226"}


id: PBO:0004214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase (predicted)","termid":"PBO:0004214"}


id: PBO:0051482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (VI)-25-1 (pseudogene)","termid":"PBO:0051482"}


id: PBO:0002544
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.30.-","termid":"PBO:0002544"}


id: PBO:0072213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 12","termid":"PBO:0072213"}


id: GO:0061532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a primary amine by a cell, in which the primary amine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"primary amine secretion","termid":"GO:0061531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"primary amine secretion, neurotransmission","termid":"GO:0061532"}


id: PBO:0032709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_error-free_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032709"}


id: MONDO:0002756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary plasmacytoma that arises from the chest wall.","definition_xrefs":["NCIT:C6711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"chest wall lymphoma","termid":"MONDO:0003985"},{"relation_name":"is_a","term_name":"plasmacytoma","termid":"MONDO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"solitary plasmacytoma of chest wall","secondary_identifiers":["DOID:3723","MEDGEN:232340","UMLS:C1332936"],"synonyms":[{"name":"chest wall plasmacytoma","type":"exact"},{"name":"chest wall solitary plasmacytoma","type":"exact"},{"name":"plasmacytoma of chest wall","type":"exact"},{"name":"solitary plasmacytoma of chest wall","type":"exact"},{"name":"solitary plasmacytoma of the chest wall","type":"exact"}],"termid":"MONDO:0002756","xrefs":{"Monarch":{"xref_id":"0002756"}}}


id: GO:0006285
data:
  {"annotated_genes":["SJAG_02528","SJAG_03724","SJAG_02261","SJAG_05257","SJAG_01119","SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73470,94060,95337,100760,106226],"is_not":false,"summary":null,"term":"GO:0006285"},{"annotations":[113032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097510"},{"annotations":[94061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The formation of an AP site, a deoxyribose sugar with a missing base, by DNA glycosylase which recognizes an altered base in DNA and catalyzes its hydrolytic removal. This sugar phosphate is the substrate recognized by the AP endonuclease, which cuts the DNA phosphodiester backbone at the 5' side of the altered site to leave a gap which is subsequently repaired.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_01971":null,"SJAG_02261":null,"SJAG_02528":null,"SJAG_03724":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"base-excision repair, AP site formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006285","terms_by_termid":{"GO:0006285":null,"GO:0045007":null,"GO:0097510":null}}


id: PBO:0059643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 9","termid":"PBO:0059643"}


id: MONDO:1010462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"cardiomyopathy, cattle","termid":"MONDO:1010443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, cattle","secondary_identifiers":["OMIA:000515-9913"],"termid":"MONDO:1010462","xrefs":{"Monarch":{"xref_id":"1010462"}}}


id: PBO:0063735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin 1","termid":"PBO:0063735"}


id: MONDO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually benign neoplasm that arises from the kidney. It usually affects females. It is characterized by the presence of a biphasic pattern with tubular and cystic structures in a spindle cell stroma. Patients usually present with flank pain and hematuria.","definition_xrefs":["NCIT:C37263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed epithelial stromal tumor","termid":"MONDO:0003272"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"mixed epithelial stromal tumor of the kidney","secondary_identifiers":["UMLS:C1272677","DOID:2678","MEDGEN:220870"],"synonyms":[{"name":"MEST","type":"exact"},{"name":"adult mesoblastic nephroma","type":"related"},{"name":"benign MEST","type":"exact"},{"name":"mixed epithelial and stromal tumor of kidney","type":"exact"},{"name":"mixed epithelial and stromal tumour of kidney","type":"exact"},{"name":"mixed epithelial stromal tumor of the kidney","type":"exact"}],"termid":"MONDO:0002386","xrefs":{"Monarch":{"xref_id":"0002386"}}}


id: MONDO:0017859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A potentially life-threatening poisoning, due to ingestion of the drug or consumption of the plant Colchicum autumnale, that usually begins with gastrointestinal symptoms (e.g. abdominal pain, nausea, vomiting, and diarrhea, that cause severe dehydration) and an initial leukocytosis leading to marrow failure (24 hours after ingestion), followed by potentially fatal multi-organ failure with mental status change, oliguric renal failure, disseminated intravascular coagulation, electrolyte imbalance, acid-base disturbance, cardiac failure/arrest and shock within 1-3 days.","definition_xrefs":["Orphanet:31824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colchicine poisoning","secondary_identifiers":["ICD9:974.7","icd11.foundation:1617857912","SCTID:24354007"],"termid":"MONDO:0017859","xrefs":{"Monarch":{"xref_id":"0017859"}}}


id: GO:1990331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetrameric protein complex capable of acetyltransferase activity. It can catalyze the transfer of an acetyl group from acetyl-CoA to an acceptor residue on histone H-3, histone H-4, or on polyamines. The complex is also capable of acetylating certain small basic proteins. The two Hpa2 dimers that make up the tetramer are held together by interactions between the bound acetyl-CoA molecules.","definition_xrefs":["GOC:bhm","PMID:10600387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"},{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"Hpa2 acetyltransferase complex","termid":"GO:1990331"}


id: MONDO:0014825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 11","termid":"MONDO:0016893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11p13 deletion syndrome, distal","secondary_identifiers":["MEDGEN:935014","UMLS:C4311047","OMIM:616902"],"termid":"MONDO:0014825","xrefs":{"Monarch":{"xref_id":"0014825"}}}


id: PBO:0080562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP11 pseudogene 2","termid":"PBO:0080562"}


id: MONDO:1012741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Chiari malformation that occurs in dogs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chiari-like malformation, dog","secondary_identifiers":["OMIA:001861-9615"],"synonyms":[{"name":"Arnold Chiari malformation, dog","type":"related"},{"name":"Chiari malformation Type I with syringomyelia, dog","type":"related"},{"name":"caudal occipital malformation syndrome, dog","type":"related"},{"name":"hindbrain herniation, dog","type":"related"},{"name":"occipital hypoplasia, dog","type":"related"}],"termid":"MONDO:1012741","xrefs":{"Monarch":{"xref_id":"1012741"}}}


id: PATO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distributed","secondary_identifiers":["PATO:0001513"],"synonyms":[{"name":"diffuse","type":"exact"},{"name":"scattered","type":"exact"}],"termid":"PATO:0001566"}


id: MONDO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign form of insulitis which is an inflammation of the islets of Langerhans of the pancreas. The pancreas and in some cases the Pancreatic β-cells become infiltrated by polymorphonuclear leukocytes and infiltrated by mononuclear cells, leading to inflammation.","definition_xrefs":["EFO:0002502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"benign insulitis","secondary_identifiers":["Wikipedia:Insulitis","PMID:20545565"],"termid":"MONDO:0005176","xrefs":{"Monarch":{"xref_id":"0005176"}}}


id: PBO:0055330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2758","termid":"PBO:0055330"}


id: PBO:0052692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16","termid":"PBO:0052692"}


id: GO:0098635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is capable of carrying out some part of the process of cell-cell adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell adhesion","termid":"GO:0098636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein complex involved in cell-cell adhesion","termid":"GO:0098635"}


id: PBO:0038558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abl interactor 1","termid":"PBO:0038558"}


id: GO:0170003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of heme B from one side of a membrane to the other.","definition_xrefs":["PMID:32121449","PMID:15369674","PMID:9657107","PMID:20610401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transmembrane transporter activity","termid":"GO:0015232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"heme B transmembrane transporter activity","termid":"GO:0170003"}


id: PBO:0063037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 4","termid":"PBO:0063037"}


id: MOD:01450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an N-formyl-L-methionine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N-formyl-L-methionine residue","termid":"MOD:00030"},{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified N-formyl-L-methionine residue","termid":"MOD:01450"}


id: MOD:01835
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfone","termid":"MOD:00256"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfone","termid":"MOD:01835"}


id: FYPO:0000998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"abnormal cell morphology during nitrogen starvation","termid":"FYPO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"elongated cell during nitrogen starvation","synonyms":[{"name":"cell morphology, elongated cell during nitrogen starvation","type":"exact"},{"name":"elongated cell during nitrogen depletion","type":"exact"},{"name":"elongated cell during nitrogen deprivation","type":"exact"},{"name":"gain of polarization during quiescence","type":"related"},{"name":"long cell during nitrogen starvation","type":"exact"}],"termid":"FYPO:0000998"}


id: FYPO:0007635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 16 of histone H4 in regions containing protein coding genes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased histone H4K16 acetylation at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone H4K16 acetylation at protein-coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007635"}


id: GO:0042972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in beta-D-glucans containing (1->3) and (1->4) bonds.","definition_xrefs":["EC:3.2.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"licheninase activity","secondary_identifiers":["MetaCyc:3.2.1.73-RXN"],"synonyms":[{"name":"1,3-1,4-beta-D-glucan 4-glucanohydrolase activity","type":"exact"},{"name":"1,3-1,4-beta-glucan 4-glucanohydrolase activity","type":"exact"},{"name":"1,3;1,4-beta-glucan 4-glucanohydrolase activity","type":"related"},{"name":"1,3;1,4-beta-glucan endohydrolase activity","type":"related"},{"name":"beta-(1->3), (1->4)-D-glucan 4-glucanohydrolase activity","type":"related"},{"name":"beta-glucanase activity","type":"broad"},{"name":"endo-beta-1,3-1,4 glucanase activity","type":"related"},{"name":"lichenase activity","type":"exact"},{"name":"mixed linkage beta-glucanase activity","type":"related"}],"termid":"GO:0042972"}


id: PBO:0044707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 6 pseudogene 1","termid":"PBO:0044707"}


id: PBO:0027856
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_morphology_during_vegetative_growth","termid":"PBO:0027856"}


id: GO:0021577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the hindbrain. This process pertains to the physical shaping of a rudimentary structure. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain structural organization","synonyms":[{"name":"hindbrain structural organisation","type":"exact"}],"termid":"GO:0021577"}


id: MONDO:0024379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A circadian sleep disorder characterized by at least three sleep episodes per 24-hour period, irregularly from day to day.","direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm sleep disorder","termid":"MONDO:0024361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circadian rhythm sleep disorder, irregular sleep wake type","secondary_identifiers":["UMLS:C0393771","MEDGEN:581571","ICD10CM:G47.23","SCTID:271793004","ICD9:327.33"],"synonyms":[{"name":"ISWD","type":"exact"},{"name":"irregular sleep-wake disorder","type":"exact"},{"name":"irregular sleep-wake pattern","type":"exact"}],"termid":"MONDO:0024379","xrefs":{"Monarch":{"xref_id":"0024379"}}}


id: PBO:0108968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 1","termid":"PBO:0108968"}


id: MONDO:1012253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic paresis, non-human animal","termid":"MONDO:1011859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paresis, cattle","secondary_identifiers":["OMIA:000928-9913"],"termid":"MONDO:1012253","xrefs":{"Monarch":{"xref_id":"1012253"}}}


id: GO:0120157
data:
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id: FYPO:0001358
data:
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id: PBO:0016076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Hal4","termid":"PBO:0016076"}


id: GO:0016787
data:
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id: MONDO:0014804
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  {"annotated_genes":["SJAG_01417"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85028],"is_not":false,"summary":null,"term":"MONDO:0014804"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial substrate carrier disorder","termid":"MONDO:0016801"},{"relation_name":"is_a","term_name":"autosomal recessive sideroblastic anemia","termid":"MONDO:0016828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002280","MONDO:0005066","MONDO:0004069","MONDO:0005570"],"is_obsolete":false,"name":"sideroblastic anemia 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:720465002","DOID:0080343","OMIM:616860","UMLS:C4225155","Orphanet:255132","GARD:17235","MEDGEN:895975"],"synonyms":[{"name":"GLRX5-related sideroblastic anaemia","type":"exact"},{"name":"GLRX5-related sideroblastic anemia","type":"exact"},{"name":"SIDBA3","type":"exact"},{"name":"adult-onset autosomal recessive sideroblastic anaemia","type":"exact"},{"name":"adult-onset autosomal recessive sideroblastic anemia","type":"exact"},{"name":"anemia, sideroblastic, 3, pyridoxine-refractory","type":"exact"}],"termid":"MONDO:0014804","terms_by_termid":{"MONDO:0014804":null},"xrefs":{"Monarch":{"xref_id":"0014804"}}}


id: PBO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase interacting protein","termid":"PBO:0061254"}


id: PBO:0048261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose mutarotase","termid":"PBO:0048261"}


id: GO:0075294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent to which it enters into the host organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"positively_regulates","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by symbiont of entry into host","secondary_identifiers":["GO:0075295"],"synonyms":[{"name":"activation by organism of entry into other organism during symbiotic interaction","type":"narrow"},{"name":"activation by symbiont of entry into host","type":"narrow"},{"name":"positive regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"positive regulation by organism of entry into other organism involved in symbiotic interaction","type":"related"},{"name":"up regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"up regulation by symbiont of entry into host","type":"exact"},{"name":"up-regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"up-regulation by symbiont of entry into host","type":"exact"},{"name":"upregulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"upregulation by symbiont of entry into host","type":"exact"}],"termid":"GO:0075294"}


id: PBO:0074832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 28","termid":"PBO:0074832"}


id: GO:0005616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit protein complex which, in Drosophila, is a heterohexamer of three subunits, alpha, beta and gamma. The complex is thought to store amino acids for synthesis of adult proteins.","definition_xrefs":["PMID:6781759","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"larval serum protein complex","termid":"GO:0005616"}


id: PBO:0002942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidophosphoribosyltransferase Ade4","termid":"PBO:0002942"}


id: GO:0061536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glycine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine transport","termid":"GO:0015816"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glycine secretion","termid":"GO:0061536"}


id: GO:1902002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation that is involved in cellular protein catabolic process.","definition_xrefs":["PMID:21098119","PMID:21993622","PMID:23264631","GOC:TermGenie","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in cellular protein catabolic process (obsolete GO:1902002)","synonyms":[{"name":"protein amino acid phosphorylation involved in cellular protein breakdown","type":"exact"},{"name":"protein amino acid phosphorylation involved in cellular protein catabolic process","type":"exact"},{"name":"protein amino acid phosphorylation involved in cellular protein catabolism","type":"exact"},{"name":"protein amino acid phosphorylation involved in cellular protein degradation","type":"exact"},{"name":"protein phosphorylation involved in cellular protein breakdown","type":"exact"},{"name":"protein phosphorylation involved in cellular protein catabolism","type":"exact"},{"name":"protein phosphorylation involved in cellular protein degradation","type":"exact"}],"termid":"GO:1902002"}


id: PBO:0084984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-cytochrome P450 reductase; involved in ergosterol biosynthesis; associated and coordinately regulated with Erg11p","termid":"PBO:0084984"}


id: PBO:0046581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 23","termid":"PBO:0046581"}


id: PBO:0068803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 40, pseudogene","termid":"PBO:0068803"}


id: MONDO:0100342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A grade III or grade IV glioma arising from the central nervous system. This category includes glioblastoma, anaplastic astrocytoma, anaplastic ependymoma, anaplastic oligodendroglioma, and anaplastic oligoastrocytoma.","definition_xrefs":["NCIT:C4822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"high grade malignant neoplasm","termid":"MONDO:0020665"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant glioma","secondary_identifiers":["DOID:3070","MEDGEN:107826","ICDO:9380/3","MedDRA:10018338","UMLS:C0555198"],"synonyms":[{"name":"glial cell tumor","type":"exact"},{"name":"glial cell tumour","type":"exact"},{"name":"glioma","type":"broad"},{"name":"glioma, malignant","type":"exact"},{"name":"high grade glioma","type":"exact"},{"name":"high-grade glioma","type":"exact"},{"name":"malignant glial neoplasm","type":"exact"},{"name":"malignant glial tumor","type":"exact"},{"name":"malignant glial tumour","type":"exact"},{"name":"malignant glioma","type":"exact"},{"name":"malignant neuroglial neoplasm","type":"exact"},{"name":"malignant neuroglial tumor","type":"exact"},{"name":"malignant neuroglial tumour","type":"exact"},{"name":"neuroglial tumor","type":"broad"},{"name":"neuroglial tumour","type":"broad"}],"termid":"MONDO:0100342","xrefs":{"Monarch":{"xref_id":"0100342"}}}


id: FYPO:0003330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the new mitotic spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body","termid":"FYPO:0002967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to new mitotic spindle pole body","synonyms":[{"name":"normal asymmetric protein localization to new mitotic spindle pole body","type":"exact"},{"name":"normal protein localisation to new mitotic spindle pole body","type":"exact"},{"name":"normal protein localization to new mitotic SPB","type":"exact"},{"name":"normal protein localization to new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"normal protein localization to new spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0003330"}


id: PBO:0085885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in invasive and pseudohyphal growth","termid":"PBO:0085885"}


id: PBO:0074140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A5","termid":"PBO:0074140"}


id: MONDO:0014532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"metabolic myopathy","termid":"MONDO:0020123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"autosomal dominant mitochondrial myopathy with exercise intolerance","secondary_identifiers":["OMIM:616209","DOID:0081357","Orphanet:457050","UMLS:C4015513","GARD:17794","MEDGEN:863950"],"synonyms":[{"name":"IMMD","type":"related"},{"name":"myopathy, isolated mitochondrial, autosomal dominant","type":"related"}],"termid":"MONDO:0014532","xrefs":{"Monarch":{"xref_id":"0014532"}}}


id: PR:O94474
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tetratricopeptide repeat protein 37 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04988","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superkiller protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.05","secondary_identifiers":["UniProtKB:O94474"],"synonyms":[{"name":"Spom972h-TTC37","type":"exact"}],"termid":"PR:O94474"}


id: GO:1904857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis to vascular endothelial growth factor.","definition_xrefs":["PMID:21885851","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of cellular response to vascular endothelial growth factor stimulus","termid":"GO:1902547"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:1904857"}


id: GO:0035124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the caudal fin are generated and organized. The caudal fin is an unpaired medial fin mounted at the caudal end of the fish and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic medial fin morphogenesis","termid":"GO:0035122"},{"relation_name":"is_a","term_name":"caudal fin morphogenesis","termid":"GO:0035143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic caudal fin morphogenesis","termid":"GO:0035124"}


id: PBO:0051620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2 pseudogene 2","termid":"PBO:0051620"}


id: PBO:0017023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR33","termid":"PBO:0017023"}


id: SO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recombination product between the 2 LTR of the same element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solo_LTR","synonyms":[{"name":"solo LTR","type":"exact"}],"termid":"SO:0001003"}


id: PBO:0079538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAP1 divergent transcript","termid":"PBO:0079538"}


id: GO:0046992
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors","type":"narrow"}],"termid":"GO:0046992","terms_by_termid":{"GO:0061686":null}}


id: GO:0060627
data:
  {"annotated_genes":["SJAG_03763","SJAG_04052","SJAG_00845","SJAG_02419","SJAG_02684","SJAG_03970","SJAG_03581","SJAG_04465","SJAG_00661","SJAG_00402","SJAG_04343","SJAG_00649","SJAG_04666","SJAG_01166","SJAG_03268","SJAG_01373","SJAG_00514","SJAG_04509","SJAG_03987","SJAG_02366","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87115,91218],"is_not":false,"summary":null,"term":"GO:0060627"},{"annotations":[93778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[87301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[102877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045807"},{"annotations":[99362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[110162,110811,117980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"},{"annotations":[87110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[76635,91907,112495,77665,102111,89078,90170,112368,91626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030100"},{"annotations":[110790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[93042,97598,87113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"},{"annotations":[112754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000156"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of vesicle-mediated transport, the directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00402":null,"SJAG_00514":null,"SJAG_00649":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01166":null,"SJAG_01373":null,"SJAG_02366":null,"SJAG_02419":null,"SJAG_02684":null,"SJAG_03268":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03763":null,"SJAG_03970":null,"SJAG_03987":null,"SJAG_04052":null,"SJAG_04343":null,"SJAG_04465":null,"SJAG_04509":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0060627","terms_by_termid":{"GO:0017157":null,"GO:0030100":null,"GO:0042997":null,"GO:0045806":null,"GO:0045807":null,"GO:0045921":null,"GO:0060627":null,"GO:0060628":null,"GO:2000156":null,"GO:2000369":null,"GO:2001135":null}}


id: FYPO:0004442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to prospore membrane","termid":"FYPO:0000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane","synonyms":[{"name":"decreased protein localisation to prospore membrane","type":"exact"},{"name":"decreased protein localization to forespore membrane","type":"exact"},{"name":"reduced protein localization to prospore membrane","type":"exact"}],"termid":"FYPO:0004442"}


id: _global:has_component
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"_global:has_part"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component","secondary_identifiers":["RO:0002180"],"termid":"_global:has_component"}


id: GO:1900905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hexadecanal metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hexadecanal metabolic process","synonyms":[{"name":"regulation of hexadecanal metabolism","type":"exact"}],"termid":"GO:1900905"}


id: PBO:0052049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 1","termid":"PBO:0052049"}


id: PBO:0052655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 23","termid":"PBO:0052655"}


id: PBO:0040678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR3 adaptor protein, NSP family member","termid":"PBO:0040678"}


id: GO:0033104
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that permits the transfer of proteins into the extracellular milieu or directly into host cells via the type VI secretion system. Proteins secreted by this complex do not require an N-terminal signal sequence.","definition_xrefs":["GOC:mlg","PMID:16432199","PMID:16763151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"type VI protein secretion system complex","synonyms":[{"name":"T6SS complex","type":"exact"}],"termid":"GO:0033104"}


id: PBO:0080243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 6, pseudogene","termid":"PBO:0080243"}


id: PBO:0081114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND3 divergent transcript","termid":"PBO:0081114"}


id: GO:0061518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a microglial cell population by cell division.","definition_xrefs":["GOC:dph","PMID:17344397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"},{"relation_name":"is_a","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell proliferation","termid":"GO:0061518"}


id: PATO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001105 absolute strain value (obsolete PATO:0001105)","termid":"PATO:0001105"}


id: MONDO:0007186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disorder characterized by reflux of the gastric and/or duodenal contents into the distal esophagus. It is usually caused by incompetence of the lower esophageal sphincter. Symptoms include heartburn and acid indigestion. It may cause injury to the esophageal mucosa.","definition_xrefs":["NCIT:C26781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastroesophageal reflux disease","secondary_identifiers":["MESH:D005764","DOID:8534","MEDGEN:6553","ICD9:530.81","EFO:0003948","OMIM:109350","SCTID:235595009","UMLS:C0017168"],"synonyms":[{"name":"GERD","type":"exact"},{"name":"GERD - gastro-esophageal reflux disease","type":"exact"},{"name":"Gastresophageal reflux","type":"exact"},{"name":"acid reflux","type":"exact"},{"name":"gastro-esophageal reflux","type":"exact"},{"name":"gastroesophageal reflux","type":"exact"},{"name":"gastroesophageal reflux disease","type":"exact"},{"name":"gastroesophageal reflux, paediatric","type":"related"},{"name":"gastroesophageal reflux, pediatric","type":"related"},{"name":"ger","type":"related"}],"termid":"MONDO:0007186","xrefs":{"Monarch":{"xref_id":"0007186"}}}


id: PBO:0015652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occupancy","termid":"PBO:0015652"}


id: PBO:0070273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 8","termid":"PBO:0070273"}


id: MOD:00242
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(ADP-ribosyl)-L-serine.","definition_xrefs":["PubMed:3141412","Unimod:213#S","PubMed:15842200","RESID:AA0237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(ADP-ribosyl)-L-serine","synonyms":[{"name":"(S)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]oxy)-propanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"MOD_RES ADP-ribosylserine","type":"exact"},{"name":"O-(ADP-ribosyl)-L-serine","type":"exact"},{"name":"O3-(ADP-ribosyl)-L-serine","type":"exact"},{"name":"O3-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-serine","type":"exact"},{"name":"O3-alpha-D-ribofuranosyl-L-serine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"OADPRibSer","type":"exact"}],"termid":"MOD:00242"}


id: PBO:0013048
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Break Localizing","termid":"PBO:0013048"}


id: PBO:0076891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 45","termid":"PBO:0076891"}


id: PBO:0036348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs1","termid":"PBO:0036348"}


id: PBO:0040872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone marrow associated non-coding RNA","termid":"PBO:0040872"}


id: GO:0072488
data:
  {"annotated_genes":["SJAG_04731","SJAG_04136"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98446,118125],"is_not":false,"summary":null,"term":"GO:0072488"}]},"cv_name":"biological_process","definition":"The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04136":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"ammonium transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015696"],"synonyms":[{"name":"ammonia transport","type":"broad"},{"name":"ammonium membrane transport","type":"exact"},{"name":"ammonium transport","type":"broad"}],"termid":"GO:0072488","terms_by_termid":{"GO:0072488":null}}


id: GO:0019820
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P2 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content; they are the least dense of the subforms observed.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005777"],"is_obsolete":false,"name":"P2 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019820"}


id: SO:0000193
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA fragment used as a reagent to detect the polymorphic genomic loci by hybridizing against the genomic DNA digested with a given restriction enzyme.","definition_xrefs":["GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_fragment","termid":"SO:0000412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFLP_fragment","secondary_identifiers":["http://en.wikipedia.org/wiki/Restriction_fragment_length_polymorphism"],"synonyms":[{"name":"RFLP","type":"exact"},{"name":"RFLP fragment","type":"exact"},{"name":"restriction fragment length polymorphism","type":"exact"}],"termid":"SO:0000193"}


id: PBO:0070246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 187 pseudogene","termid":"PBO:0070246"}


id: MOD:00498
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen of a residue with a fluorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorinated residue","synonyms":[{"name":"FRes","type":"exact"},{"name":"Fluoro","type":"related"},{"name":"Fluorophenylalanyl","type":"exact"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"}],"termid":"MOD:00498"}


id: PBO:0054071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1419","termid":"PBO:0054071"}


id: GO:0031035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"myosin filament disassembly","synonyms":[{"name":"myosin depolymerization","type":"related"}],"termid":"GO:0031035"}


id: GO:0047840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dCTP + H2O = dCMP + H+ + diphosphate.","definition_xrefs":["RHEA:22636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0047429","GO:0016787"],"is_obsolete":false,"name":"dCTP diphosphatase activity","secondary_identifiers":["EC:3.6.1.12","Reactome:R-HSA-6786257","MetaCyc:DCTP-PYROPHOSPHATASE-RXN"],"synonyms":[{"name":"dCTP nucleotidohydrolase activity","type":"related"},{"name":"dCTP pyrophosphatase activity","type":"exact"},{"name":"dCTPase activity","type":"related"},{"name":"deoxy-CTPase activity","type":"related"},{"name":"deoxycytidine triphosphatase activity","type":"related"},{"name":"deoxycytidine-triphosphatase activity","type":"related"}],"termid":"GO:0047840"}


id: PBO:0088737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex WD repeat subunit, hira family Hip1","termid":"PBO:0088737"}


id: GO:0045202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.","definition_xrefs":["PMID:31998110","GOC:aruk","ISBN:0198506732","PMID:24619342","PMID:29383328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction","termid":"GO:0030054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"synapse","secondary_identifiers":["Wikipedia:Chemical_synapse","NIF_Subcellular:sao914572699"],"synonyms":[{"name":"electrotonic synapse","type":"related"},{"name":"mixed synapse","type":"narrow"},{"name":"synaptic junction","type":"exact"}],"termid":"GO:0045202"}


id: FYPO:0002824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abnormal protein localization to spindle","termid":"FYPO:0007863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle","synonyms":[{"name":"abnormal protein localisation to mitotic spindle","type":"exact"},{"name":"abnormal protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to spindle during mitosis","type":"exact"},{"name":"abnormal protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0002824"}


id: GO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of neutrophil degranulation","termid":"GO:0043313"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of neutrophil degranulation","synonyms":[{"name":"down regulation of neutrophil degranulation","type":"exact"},{"name":"down-regulation of neutrophil degranulation","type":"exact"},{"name":"downregulation of neutrophil degranulation","type":"exact"},{"name":"inhibition of neutrophil degranulation","type":"narrow"},{"name":"negative regulation of neutrophil granule exocytosis","type":"exact"}],"termid":"GO:0043314"}


id: GO:0047242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroxyanthraquinone + UDP-D-glucose = a glucosyloxyanthraquinone + UDP.","definition_xrefs":["EC:2.4.1.181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"hydroxyanthraquinone glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.181-RXN"],"synonyms":[{"name":"UDP-glucose:hydroxyanthraquinone O-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:hydroxyanthraquinone O-glucosyltransferase activity","type":"related"},{"name":"anthraquinone-specific glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-anthraquinone glucosyltransferase activity","type":"related"}],"termid":"GO:0047242"}


id: GO:0016590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals, Isw2 in S. cerevisiae), an ACF1 homolog, and generally no other subunits, though Xenopus is an exception with a third non-conserved subunit. ACF plays roles in regulation of RNA polymerase II transcription and in DNA replication and repair.","definition_xrefs":["PMID:12192034","PMID:15284901","PMID:16568949","PMID:21810179","GOC:krc","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"ACF complex","synonyms":[{"name":"ATP-utilizing chromatin assembly and remodeling factor complex","type":"exact"}],"termid":"GO:0016590"}


id: GO:1990609
data:
  {"annotated_genes":["SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117304],"is_not":false,"summary":null,"term":"GO:1990609"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of glutamate-cysteine ligase.","definition_xrefs":["PMID:8103521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"glutamate-cysteine ligase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990609","terms_by_termid":{"GO:1990609":null}}


id: PBO:0051862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 2 pseudogene 1","termid":"PBO:0051862"}


id: PBO:0051993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAKMIP3 antisense RNA 1","termid":"PBO:0051993"}


id: MONDO:0005756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the ethmoid sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethmoid sinusitis","secondary_identifiers":["MEDGEN:5046","NCIT:C34597","SCTID:18643000","DOID:9507","UMLS:C0015029","MESH:D015521","EFO:0007264"],"synonyms":[{"name":"ethmoid bone sinusitis","type":"exact"},{"name":"ethmoidal sinusitis","type":"exact"},{"name":"ethmoiditis","type":"exact"},{"name":"sinusitis of ethmoid bone","type":"exact"}],"termid":"MONDO:0005756","xrefs":{"Monarch":{"xref_id":"0005756"}}}


id: MONDO:0013047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that affects how the body breaks down sugar to use as energy in muscle cells. People withthis conditionexperience fatigue, muscle pain, and cramps during exercise (exercise intolerance). In some people,high-intensity exercise or other strenuous activity leads to the breakdown of muscle tissue (rhabdomyolysis), which can lead to myoglobinuria (rust-colored urine indicating breakdown of muscle tissue) and kidney damage. A skin rash may also develop. The severity of the signs and symptoms varies greatly among affected individuals. Lactate dehydrogenase A deficiency is caused by mutations in the LDHA gene. This condition is inherited in an autosomal recessive pattern.","definition_xrefs":["GARD:0003160"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","termid":"MONDO:0016118"},{"relation_name":"excluded_subClassOf","term_name":"glycogen storage disease due to lactate dehydrogenase deficiency","termid":"MONDO:0016527"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"glycogen storage disease due to lactate dehydrogenase M-subunit deficiency","secondary_identifiers":["SCTID:237982007","NANDO:1200833","GARD:3160","HGNC:6535","Orphanet:284426","MEDGEN:419152","MESH:C538133","ICD9:271.8","OMIM:612933","UMLS:C2931743"],"synonyms":[{"name":"GSD 11","type":"related"},{"name":"GSD XI","type":"related"},{"name":"GSD due to lactate dehydrogenase M-subunit deficiency","type":"exact"},{"name":"GSD type 11","type":"related"},{"name":"GSD11","type":"related"},{"name":"LDH-M subunit deficiency","type":"exact"},{"name":"LDHA glycogen storage disease","type":"exact"},{"name":"glycogen storage disease XI","type":"related"},{"name":"glycogen storage disease caused by mutation in LDHA","type":"exact"},{"name":"glycogen storage disease type 11","type":"related"},{"name":"glycogenosis due to lactate dehydrogenase M-subunit deficiency","type":"exact"},{"name":"glycogenosis type 11","type":"related"},{"name":"lactate dehydrogenase A deficiency","type":"exact"},{"name":"lactate dehydrogenase deficiency type A","type":"related"}],"termid":"MONDO:0013047","xrefs":{"Monarch":{"xref_id":"0013047"}}}


id: MONDO:0009784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegic neuromuscular disorder with abnormal mitochondria","secondary_identifiers":["OMIM:258470","MEDGEN:340508","MESH:C564925","UMLS:C1850302"],"synonyms":[{"name":"ophthalmoplegic neuromuscular disorder with abnormal mitochondria","type":"exact"}],"termid":"MONDO:0009784","xrefs":{"Monarch":{"xref_id":"0009784"}}}


id: MONDO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prolapse of female genital organ","termid":"MONDO:0001592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral cystocele","secondary_identifiers":["SCTID:441891001","ICD9:618.02","DOID:14130","MEDGEN:751516","UMLS:C2711750","ICD10CM:N81.12"],"termid":"MONDO:0001885","xrefs":{"Monarch":{"xref_id":"0001885"}}}


id: PBO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Arrest Deficient","termid":"PBO:0003555"}


id: MONDO:0008737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial afibrinogenemia is a coagulation disorder characterized by bleeding symptoms due to a complete absence of circulating fibrinogen.","definition_xrefs":["Orphanet:98880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dysfibrinogenemia","termid":"MONDO:0014452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital afibrinogenemia","secondary_identifiers":["MESH:D000347","SCTID:154818001","NCIT:C98130","UMLS:C2584774","MEDGEN:749036","GARD:5761","NORD:739","NANDO:2200672","OMIM:202400","DOID:2236"],"synonyms":[{"name":"afibrinogenemia","type":"related"},{"name":"afibrinogenemia congenital","type":"related"},{"name":"afibrinogenemia, congenital","type":"related"},{"name":"factor I deficiency","type":"narrow"},{"name":"familial afibrinogenemia","type":"related"},{"name":"fibrinogen deficiency","type":"exact"},{"name":"hypofibrinogenemia, congenital","type":"related"}],"termid":"MONDO:0008737","xrefs":{"Monarch":{"xref_id":"0008737"}}}


id: MONDO:0017259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic diseases with anterior uveitis (obsolete MONDO:0017259)","secondary_identifiers":["Orphanet:280926"],"termid":"MONDO:0017259","xrefs":{"Monarch":{"xref_id":"0017259"}}}


id: MONDO:0004730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term referring to disorders characterized by the disruption of normal speech. It includes stuttering, lisps, dysarthria and voice disorders.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"communication disorder","termid":"MONDO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speech disorder","secondary_identifiers":["UMLS:C0037822","ICD9:784.40","DOID:92","MEDGEN:11531","NCIT:C5041","ICD9:784.49","MESH:D013064","SCTID:47004009"],"synonyms":[{"name":"speech impediment or impairment","type":"exact"}],"termid":"MONDO:0004730","xrefs":{"Monarch":{"xref_id":"0004730"}}}


id: GO:2000078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic B cell development.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell development","termid":"GO:2000074"},{"relation_name":"positively_regulates","term_name":"type B pancreatic cell development","termid":"GO:0003323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type B pancreatic cell development","synonyms":[{"name":"positive regulation of pancreatic B cell development","type":"exact"},{"name":"positive regulation of pancreatic beta cell development","type":"exact"}],"termid":"GO:2000078"}


id: GO:0035169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized larval lymph gland-derived hemocyte precursor cell acquires the specialized features of the phagocytic blood-cell type, the plasmatocyte.","definition_xrefs":["GOC:bf","PMID:11921077","PMID:8174791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval lymph gland hemocyte differentiation","termid":"GO:0035168"},{"relation_name":"is_a","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph gland plasmatocyte differentiation","synonyms":[{"name":"lymph gland plasmatocyte cell differentiation","type":"exact"}],"termid":"GO:0035169"}


id: PBO:0073747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3 pseudogene 4","termid":"PBO:0073747"}


id: PBO:0071028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 30","termid":"PBO:0071028"}


id: PBO:0052223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 1","termid":"PBO:0052223"}


id: PBO:0076533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 50","termid":"PBO:0076533"}


id: MONDO:0021104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lipid infiltration of the hepatic parenchymal cells that is due to alcohol abuse. The fatty changes in the alcoholic fatty liver may be reversible, depending on the amounts of triglycerides accumulated.","definition_xrefs":["MESH:D005235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty liver disease","termid":"MONDO:0004790"},{"relation_name":"is_a","term_name":"alcoholic liver diseases","termid":"MONDO:0043693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"alcoholic fatty liver disease","secondary_identifiers":["UMLS:C0015696","SCTID:50325005","ICD9:571.0","MEDGEN:4666"],"synonyms":[{"name":"alcoholic Steatohepatitis","type":"exact"},{"name":"alcoholic fatty liver","type":"exact"}],"termid":"MONDO:0021104","xrefs":{"Monarch":{"xref_id":"0021104"}}}


id: PBO:0063813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 2","termid":"PBO:0063813"}


id: PBO:0068624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 4, pseudogene","termid":"PBO:0068624"}


id: PBO:0044107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 55","termid":"PBO:0044107"}


id: FYPO:0004679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyadenylated 25S rRNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"polyadenylated 25S rRNA absent from cell","synonyms":[{"name":"polyadenylated 25S rRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"polyadenylated 25S rRNA absent from cell during vegetative growth","type":"exact"},{"name":"polyadenylated 25S rRNA transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable polyadenylated 25S rRNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004679"}


id: PBO:0050421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H1","termid":"PBO:0050421"}


id: PBO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc4","termid":"PBO:0002330"}


id: GO:0047948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + glutarate = ADP + glutaryl-CoA + H+ + phosphate.","definition_xrefs":["RHEA:14169","EC:6.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"glutarate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R02402","MetaCyc:GLUTARATE--COA-LIGASE-RXN"],"synonyms":[{"name":"glutarate:CoA ligase (ADP-forming)","type":"related"},{"name":"glutaryl coenzyme A synthetase activity","type":"related"},{"name":"glutaryl-CoA synthetase activity","type":"related"}],"termid":"GO:0047948"}


id: MONDO:0005319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A traumatic or pathologic injury to the humerus in which the continuity of the humerus is broken.","definition_xrefs":["EFO:0003943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"humerus fracture","secondary_identifiers":["MESH:D006810","SCTID:66308002"],"synonyms":[{"name":"fracture, humeral","type":"exact"},{"name":"fractures, humeral","type":"exact"},{"name":"humeral fracture","type":"exact"}],"termid":"MONDO:0005319","xrefs":{"Monarch":{"xref_id":"0005319"}}}


id: SO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Elements of the LINE I superfamily are similar to the Jockey and L1 superfamily. They contains two ORFs, the.second of which includes  Apurinic endonuclease (APE) and  reverse transcriptase (RT). The I superfamily encodes an RH (RNase H) domain downstream of the RT domain.","direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I_LINE_retrotransposon","secondary_identifiers":["https://www.sciencedirect.com/topics/biochemistry-genetics-and-molecular-biology/long-interspersed-nuclear-element"],"synonyms":[{"name":"I LINE retrotransposon","type":"exact"},{"name":"LINE I element","type":"exact"},{"name":"RII retrotransposon","type":"exact"}],"termid":"SO:0002273"}


id: PBO:0053487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 462","termid":"PBO:0053487"}


id: MONDO:0019242
data:
  {"annotated_genes":["SJAG_00944","SJAG_04149","SJAG_02433","SJAG_03290","SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[85505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[84747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100058"},{"annotations":[84350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[84438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of branched-chain amino acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00944":null,"SJAG_02433":null,"SJAG_03069":null,"SJAG_03290":null,"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"inborn disorder of branched-chain amino acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79197","icd11.foundation:5456505","UMLS:C0342712","GARD:18971","SCTID:116020001","MEDGEN:87452"],"synonyms":[{"name":"branched chain amino acid metabolism disorder","type":"related"},{"name":"disorder of branched chain amino acid metabolism","type":"related"},{"name":"disorder of branched-chain amino acid metabolism","type":"exact"},{"name":"inborn branched-chain amino acid metabolic process disorder","type":"exact"},{"name":"inborn disorder of branched-chain amino acid metabolism","type":"exact"},{"name":"inborn error of branched-chain amino acid metabolic process","type":"exact"},{"name":"rare inborn error of branched-chain amino acid metabolic process","type":"exact"}],"termid":"MONDO:0019242","terms_by_termid":{"MONDO:0009529":null,"MONDO:0009603":null,"MONDO:0009666":null,"MONDO:0014057":null,"MONDO:0100058":null},"xrefs":{"Monarch":{"xref_id":"0019242"}}}


id: PBO:0064613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 3","termid":"PBO:0064613"}


id: PBO:0075489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily E member 2, pseudogene","termid":"PBO:0075489"}


id: PBO:0041098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and WD repeat domain containing 1 pseudogene 3","termid":"PBO:0041098"}


id: MONDO:1012154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in domestic ferret.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, domestic ferret","secondary_identifiers":["OMIA:000631-9669"],"termid":"MONDO:1012154","xrefs":{"Monarch":{"xref_id":"1012154"}}}


id: MONDO:0000183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertrophic osteoarthropathy, primary (obsolete MONDO:0000183)","termid":"MONDO:0000183","xrefs":{"Monarch":{"xref_id":"0000183"}}}


id: GO:0071354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-6 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-6","termid":"GO:0070741"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-6","synonyms":[{"name":"cellular response to IL-6","type":"exact"}],"termid":"GO:0071354"}


id: GO:1901801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,5-anhydro-D-fructose.","definition_xrefs":["MetaCyc:PWY-6992","PMID:15716041","GOC:TermGenie","UniPathway:UPA00738","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose metabolic process","synonyms":[{"name":"1,5-anhydro-D-fructose metabolism","type":"exact"}],"termid":"GO:1901801"}


id: PBO:0026734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_during_meiotic_cell_cycle","termid":"PBO:0026734"}


id: PBO:0063931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired immunoglobin like type 2 receptor beta","termid":"PBO:0063931"}


id: GO:0070307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a lens fiber cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a lens fiber cell fate. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["PMID:7693735","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell development","synonyms":[{"name":"lens fibre cell development","type":"exact"}],"termid":"GO:0070307"}


id: GO:0044260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular macromolecule metabolic process (obsolete GO:0044260)","synonyms":[{"name":"cellular biopolymer metabolic process","type":"exact"},{"name":"cellular macromolecule metabolism","type":"exact"}],"termid":"GO:0044260"}


id: GO:0097325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of melanocytes, resulting in the expansion of a cell population. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.","definition_xrefs":["GOC:uh","PMID:22637532","CL:0000148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanocyte proliferation","termid":"GO:0097325"}


id: PR:Q9UT40
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC824.03c gene.","definition_xrefs":["UniProtKB:Q9UT40","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C824.03c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.03c","synonyms":[{"name":"Spom972h-SPAC824.03c","type":"exact"}],"termid":"PR:Q9UT40"}


id: PBO:0088795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase Oct1","termid":"PBO:0088795"}


id: GO:0072374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-carotene + O2 + reduced [NADPH--hemoprotein reductase] = alpha-cryptoxanthin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase]. Zeinoxanthin may also be used as the substrate, in which case lutein is produced.","definition_xrefs":["PMID:8837513","EC:1.14.14.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carotene epsilon hydroxylase activity","termid":"GO:0072374"}


id: MONDO:0007737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Humero-radial synostosis is a rare, genetic, congenital joint formation defect disorder characterized by uni- or bilateral fusion of the humerus and radius bones at the elbow level, with or without associated ulnar and carpal/metacarpal deficiency, leading to loss of elbow motion and, in many cases, functional arm incapacity. Bowing of radius may be additionally present.","definition_xrefs":["Orphanet:3265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humeroradial synostosis","secondary_identifiers":["MEDGEN:418931","UMLS:C2930865","ICD9:755.59","OMIM:143050","DOID:0060467","icd11.foundation:518723993","SCTID:205329008","HP:0003041","GARD:2748"],"synonyms":[{"name":"humero-radial fusion","type":"exact"},{"name":"humero-radial synostosis","type":"related"},{"name":"humeroradial synostosis","type":"exact"},{"name":"humeroradial synostosis (disease)","type":"exact"}],"termid":"MONDO:0007737","xrefs":{"Monarch":{"xref_id":"0007737"}}}


id: PBO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 74B pseudogene 1","termid":"PBO:0042019"}


id: MONDO:0012009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary heart disease, susceptibility to, 2","secondary_identifiers":["UMLS:C1842260","OMIM:608316","MEDGEN:330807"],"synonyms":[{"name":"Chds2","type":"related"},{"name":"coronary heart disease, susceptibility to, 2","type":"exact"},{"name":"coronary heart disease, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0012009","xrefs":{"Monarch":{"xref_id":"0012009"}}}


id: PR:Q9UUF3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17A3.03c gene.","definition_xrefs":["UniProtKB:Q9UUF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase C17A3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.03c","synonyms":[{"name":"Spom972h-SPBC17A3.03c","type":"exact"}],"termid":"PR:Q9UUF3"}


id: MONDO:0001889
data:
  {"annotated_genes":["SJAG_00103","SJAG_03051","SJAG_03720","SJAG_02954","SJAG_04148","SJAG_02690","SJAG_00377","SJAG_04703","SJAG_02339","SJAG_03418","SJAG_04114","SJAG_04950","SJAG_02294","SJAG_04738","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[85189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[86178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[84864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[85623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[86424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[85234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[84850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[85640,85641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[84935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[85337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[86232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[85825,85826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"The inability of the ovaries to function.","definition_xrefs":["NCIT:C113351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"ovarian dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:256.39","MEDGEN:509544","UMLS:C0154208","SCTID:37102008","EFO:0009003","ICD9:256.3","DOID:1414","ICD10CM:E28","icd11.foundation:1801368748","ICD9:256.8","ICD9:256.9"],"synonyms":[{"name":"ovarian failure","type":"exact"},{"name":"ovarian hypofunction","type":"exact"},{"name":"ovarian insufficiency","type":"exact"}],"termid":"MONDO:0001889","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0001889"}}}


id: PBO:0061558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5DC1 pseudogene 1","termid":"PBO:0061558"}


id: FYPO:0001767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C48, C49, C60, C61 and C62 residues in a tRNA-Asp molecule, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased tRNA-Asp C48, C49, C60, C61 and C62 methylation","synonyms":[{"name":"decreased tRNA-Asp C48, C49, C60, C61 and C62 methylation during mitotic cell cycle","type":"related"},{"name":"decreased tRNA-Asp C48, C49, C60, C61 and C62 methylation during vegetative growth","type":"exact"},{"name":"decreased tRNA-Asp methylation on C48, C49, C60, C61 and C62","type":"exact"},{"name":"reduced tRNA-Asp C48, C49, C60, C61 and C62 methylation","type":"exact"}],"termid":"FYPO:0001767"}


id: MOD:01801
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an L-serinium (protonated L-serine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-serine (L-serinium) residue","termid":"MOD:01801"}


id: PBO:0066440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RETREG1 antisense RNA 1","termid":"PBO:0066440"}


id: PBO:0078171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-2","termid":"PBO:0078171"}


id: PBO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha 2","termid":"PBO:0060431"}


id: PBO:0017664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug114","termid":"PBO:0017664"}


id: PATO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green and blue hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyan","termid":"PATO:0000319"}


id: MONDO:0002229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant tumor that originates from the surface epithelium of the ovary. It is composed of epithelial cells and stroma. Representative examples of benign tumors include serous cystadenoma, mucinous cystadenoma, and benign Brenner tumor. Representative examples of borderline tumors include serous surface papillary tumor, mucinous adenofibroma, and borderline Brenner tumor. Representative examples of malignant tumors include serous adenocarcinoma, mucinous adenocarcinoma, endometrioid adenocarcinoma, and malignant Brenner tumor.","definition_xrefs":["NCIT:C4381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian epithelial tumor","secondary_identifiers":["UMLS:C0341823","DOID:2152","ONCOTREE:OVT","SCTID:237057005","ICD9:239.5","MEDGEN:90969"],"synonyms":[{"name":"OVT","type":"related"},{"name":"epithelial neoplasm of ovary","type":"exact"},{"name":"epithelial neoplasm of the ovary","type":"exact"},{"name":"epithelial tumor of ovary","type":"exact"},{"name":"epithelial tumor of the ovary","type":"exact"},{"name":"epithelial tumour of ovary","type":"exact"},{"name":"epithelial tumour of the ovary","type":"exact"},{"name":"ovarian epithelial tumor","type":"exact"},{"name":"ovarian surface epithelial-stromal tumor","type":"exact"},{"name":"ovarian surface epithelial-stromal tumour","type":"exact"},{"name":"ovarian surface-epithelial stromal neoplasm","type":"exact"},{"name":"ovary epithelial cancer","type":"related"},{"name":"ovary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0002229","xrefs":{"Monarch":{"xref_id":"0002229"}}}


id: PBO:0028522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_zearalenone","termid":"PBO:0028522"}


id: PBO:0075337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related VPS10 domain containing receptor 2","termid":"PBO:0075337"}


id: GO:0033928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-mannosidic linkages in (1->4)-beta-D-mannans, to remove successive mannobiose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"mannan 1,4-mannobiosidase activity","secondary_identifiers":["MetaCyc:3.2.1.100-RXN"],"synonyms":[{"name":"1,4-beta-D-mannan mannobiohydrolase activity","type":"broad"},{"name":"exo-1,4-beta-mannobiohydrolase activity","type":"related"},{"name":"exo-beta-mannanase activity","type":"related"},{"name":"mannan 1,4-beta-mannobiosidase activity","type":"related"}],"termid":"GO:0033928"}


id: PBO:0053625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 668","termid":"PBO:0053625"}


id: GO:0034195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-galactonate, the anion of L-galactonic acid.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"galactonate catabolic process","termid":"GO:0019584"},{"relation_name":"is_a","term_name":"L-galactonate metabolic process","termid":"GO:0034193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"L-galactonate catabolic process","synonyms":[{"name":"L-galactonate breakdown","type":"exact"},{"name":"L-galactonate catabolism","type":"exact"},{"name":"L-galactonate degradation","type":"exact"}],"termid":"GO:0034195"}


id: PBO:0031605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_S_phase_progression","termid":"PBO:0031605"}


id: PR:O94268
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop2 gene.","definition_xrefs":["UniProtKB:O94268","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA (cytosine-C(5))-methyltransferase nop2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.20c","synonyms":[{"name":"Spom972h-nop2","type":"exact"},{"name":"nucleolar protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94268"}


id: PBO:0046693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETNK1 divergent transcript","termid":"PBO:0046693"}


id: GO:0005072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Activity of any of the molecules that transmit the signal from a TGF-beta receptor through the cytoplasm to the nucleus.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, cytoplasmic mediator activity (obsolete GO:0005072)","synonyms":[{"name":"TGF-beta receptor, cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, cytoplasmic mediator activity","type":"exact"}],"termid":"GO:0005072"}


id: GO:0046129
data:
  {"annotated_genes":["SJAG_06634","SJAG_01859","SJAG_00134","SJAG_03881","SJAG_01070","SJAG_03096","SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[115972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[107654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[88983,92952,92734,114973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any purine ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside biosynthetic process","termid":"GO:0042451"},{"relation_name":"is_a","term_name":"ribonucleoside biosynthetic process","termid":"GO:0042455"},{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside anabolism","type":"exact"},{"name":"purine ribonucleoside biosynthesis","type":"exact"},{"name":"purine ribonucleoside formation","type":"exact"},{"name":"purine ribonucleoside synthesis","type":"exact"}],"termid":"GO:0046129","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046086":null}}


id: MONDO:0014243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi syndrome","termid":"MONDO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"Schaaf-Yang syndrome","secondary_identifiers":["GARD:13316","OMIM:615547","MESH:C535385","OMIM:208080","UMLS:C5575066","MEDGEN:1807366","DOID:0111715","Orphanet:398069"],"synonyms":[{"name":"Chitayat-Hall syndrome","type":"related"},{"name":"MAGEL2-related PWLS","type":"exact"},{"name":"MAGEL2-related Prader-Willi-like syndrome","type":"exact"},{"name":"PWS due to a point mutation","type":"related"},{"name":"Prader-Willi syndrome due to point mutation","type":"related"},{"name":"Prader-Willi-like syndrome","type":"related"},{"name":"SHFYNG","type":"exact"},{"name":"Schaaf-Yang syndrome","type":"exact"},{"name":"arthrogryposis, distal, with hypopituitarism, intellectual disability, and facial anomalies","type":"exact"},{"name":"arthrogryposis, distal, with hypopituitarism, mental retardation, and facial anomalies","type":"exact"},{"name":"distal arthrogryposis with hypopituitarism, intellectual disability and facial anomalies","type":"related"}],"termid":"MONDO:0014243","xrefs":{"Monarch":{"xref_id":"0014243"}}}


id: MONDO:0011712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any van der Woude syndrome in which the cause of the disease is a mutation in the GRHL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"van der Woude syndrome","termid":"MONDO:0019508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van der Woude syndrome 2","secondary_identifiers":["UMLS:C1847604","MESH:C536529","GARD:7846","MEDGEN:338272","OMIM:606713"],"synonyms":[{"name":"GRHL3 van der Woude syndrome","type":"exact"},{"name":"VAN DER Woude syndrome 2","type":"related"},{"name":"VWS2","type":"related"},{"name":"Van Der Woude syndrome type 2","type":"exact"},{"name":"van der Woude syndrome 2","type":"exact"},{"name":"van der Woude syndrome caused by mutation in GRHL3","type":"exact"}],"termid":"MONDO:0011712","xrefs":{"Monarch":{"xref_id":"0011712"}}}


id: MONDO:0957317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematuria, benign familial","secondary_identifiers":["UMLS:C0241908","OMIMPS:141200","DOID:0111365","MEDGEN:66039","MESH:C562476","Orphanet:97562"],"termid":"MONDO:0957317","xrefs":{"Monarch":{"xref_id":"0957317"}}}


id: PBO:0073821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 1","termid":"PBO:0073821"}


id: GO:0051391
data:
  {"annotated_genes":["SJAG_01877","SJAG_01638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91814,106480],"is_not":false,"summary":null,"term":"GO:0051391"}]},"cv_name":"biological_process","definition":"The modification of tRNA structure by addition of an acetyl group to tRNA. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"RNA acetylation","termid":"GO:1990884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01638":null,"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA acetylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051391","terms_by_termid":{"GO:0051391":null}}


id: GO:0032449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising Bcl10, MALT1 and a CARD domain-containing protein (CARD9, CARD10 or CARD11); plays a role in signal transduction during NF-kappaB activation.","definition_xrefs":["PMID:12909454","PMID:30467369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CBM complex","synonyms":[{"name":"CARMA1-BCL10-Malt1 complex","type":"exact"}],"termid":"GO:0032449"}


id: PBO:0028816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028816"}


id: PBO:0028804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028804"}


id: PBO:0059541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-His (CAU/C)","termid":"PBO:0059541"}


id: MONDO:0013658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the EPB41L1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 11","secondary_identifiers":["UMLS:C3280285","MEDGEN:481915","DOID:0070041","GARD:16461","OMIM:614257"],"synonyms":[{"name":"EPB41L1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD11","type":"exact"},{"name":"autosomal dominant intellectual disability 11","type":"exact"},{"name":"autosomal dominant mental retardation 11","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 11","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in EPB41L1","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 11","type":"exact"},{"name":"intellectual disability, autosomal dominant 11","type":"exact"},{"name":"intellectual disability, autosomal dominant type 11","type":"exact"},{"name":"mental retardation, autosomal dominant 11","type":"related"},{"name":"mental retardation, autosomal dominant type 11","type":"exact"}],"termid":"MONDO:0013658","xrefs":{"Monarch":{"xref_id":"0013658"}}}


id: PBO:0076052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short transmembrane mitochondrial protein 1","termid":"PBO:0076052"}


id: GO:0015123
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97898],"is_not":false,"summary":null,"term":"GO:0015123"}]},"cv_name":"molecular_function","definition":"Enables the transfer of acetate from one side of a membrane to the other. Acetate is the 2-carbon carboxylic acid ethanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"acetate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015123","terms_by_termid":{"GO:0015123":null}}


id: PBO:0030767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_during_cellular_response_to_UV","termid":"PBO:0030767"}


id: PBO:0034140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_many_homology_relationship_with","termid":"PBO:0034140"}


id: GO:2000066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid biosynthetic process","termid":"GO:0031948"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"is_a","term_name":"regulation of cortisol biosynthetic process","termid":"GO:2000064"},{"relation_name":"positively_regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of cortisol biosynthetic process","synonyms":[{"name":"positive regulation of cortisol anabolism","type":"related"},{"name":"positive regulation of cortisol biosynthesis","type":"exact"},{"name":"positive regulation of cortisol formation","type":"exact"},{"name":"positive regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000066"}


id: GO:0007158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a neuron to another cell via adhesion molecules.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neuron cell-cell adhesion","synonyms":[{"name":"neuron adhesion","type":"exact"},{"name":"neuronal cell adhesion","type":"exact"}],"termid":"GO:0007158"}


id: GO:0019564
data:
  {"annotated_genes":["SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87817],"is_not":false,"summary":null,"term":"GO:0019564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, in the presence of oxygen.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol catabolic process","termid":"GO:0019563"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"aerobic glycerol catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019565","MetaCyc:PWY0-381"],"synonyms":[{"name":"aerobic glycerol breakdown","type":"exact"},{"name":"aerobic glycerol catabolism","type":"exact"},{"name":"aerobic glycerol degradation","type":"exact"},{"name":"aerobic glycerol fermentation","type":"related"}],"termid":"GO:0019564","terms_by_termid":{"GO:0019564":null}}


id: PBO:0055176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2600","termid":"PBO:0055176"}


id: PBO:0082755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells","termid":"PBO:0082755"}


id: GO:1900730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase-inhibiting opioid receptor signaling pathway.","definition_xrefs":["GOC:sjw","GOC:TermGenie","PMID:17157995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","termid":"GO:1900729"},{"relation_name":"is_a","term_name":"negative regulation of opioid receptor signaling pathway","termid":"GO:2000475"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","termid":"GO:0031635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"down regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"exact"},{"name":"down-regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"exact"},{"name":"downregulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"narrow"},{"name":"inhibition of opioid receptor-mediated adenylate cyclase inhibition","type":"related"},{"name":"negative regulation of inhibition of adenylate cyclase activity by opioid receptor signaling pathway","type":"related"},{"name":"negative regulation of inhibition of adenylate cyclase activity by opioid receptor signalling pathway","type":"related"}],"termid":"GO:1900730"}


id: PBO:0027894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methyltransferase_activity_(H3-K4_specific)","termid":"PBO:0027894"}


id: PBO:0005288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain protein, implicated in translation","termid":"PBO:0005288"}


id: GO:0050767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurogenesis, the generation of cells in the nervous system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neurogenesis","termid":"GO:0050767"}


id: GO:0098889
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic membrane (obsolete GO:0098889)","synonyms":[{"name":"intrinsic to presynaptic membrane","type":"narrow"}],"termid":"GO:0098889"}


id: PBO:0078951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 3-1","termid":"PBO:0078951"}


id: PBO:0045216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene 1","termid":"PBO:0045216"}


id: GO:0097359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a UDP-glucose residue to a substrate molecule.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-alpha-D-glucose metabolic process","termid":"GO:0006011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"UDP-glucosylation","termid":"GO:0097359"}


id: PBO:0031234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_or_maintenance_of_actin_cytoskeleton_polarity","termid":"PBO:0031234"}


id: PBO:0063656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 13","termid":"PBO:0063656"}


id: MONDO:0958256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoderma gangrenosum-acne-hidradenitis suppurativa-ankylosing spondylitis syndrome","secondary_identifiers":["UMLS:C5816788","MEDGEN:1853171","Orphanet:641385"],"synonyms":[{"name":"PASS syndrome","type":"exact"}],"termid":"MONDO:0958256","xrefs":{"Monarch":{"xref_id":"0958256"}}}


id: GO:0061585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of orexin from a cell in which orexin acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion, neurotransmission","termid":"GO:0061544"},{"relation_name":"is_a","term_name":"orexin secretion","termid":"GO:0061584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"orexin secretion, neurotransmission","synonyms":[{"name":"hypocretin secretion, neurotransmission","type":"exact"}],"termid":"GO:0061585"}


id: GO:0102465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: zeaxanthin + 2 NADH + 2 H+ + 2 O2 = nostoxanthin + 2 NAD + 2 H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"zeaxanthin 2,2'-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14018"],"termid":"GO:0102465"}


id: PR:Q9UT03
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sls1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT03"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sls1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.14c","synonyms":[{"name":"Spom972h-sls1","type":"exact"}],"termid":"PR:Q9UT03"}


id: GO:0010855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and decreases the activity of adenylate cyclase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase inhibitor activity","termid":"GO:0010852"},{"relation_name":"is_a","term_name":"adenylate cyclase regulator activity","termid":"GO:0010854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140678","GO:0030234","GO:0098772","GO:0003674","GO:0004857"],"is_obsolete":false,"name":"adenylate cyclase inhibitor activity","secondary_identifiers":["Reactome:R-HSA-400097"],"termid":"GO:0010855"}


id: PBO:0028499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosome_binding","termid":"PBO:0028499"}


id: PBO:0078655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 8-1","termid":"PBO:0078655"}


id: MONDO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A plague in which the bacteria have infected the lymphatic system.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"},{"relation_name":"is_a","term_name":"plague","termid":"MONDO:0019095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"bubonic plague","secondary_identifiers":["UMLS:C0282312","icd11.foundation:1742025109","MEDGEN:76407","SCTID:50797007","GARD:183","ICD10CM:A20.0","DOID:10773","ICD9:020.0"],"synonyms":[{"name":"black death","type":"exact"}],"termid":"MONDO:0001112","xrefs":{"Monarch":{"xref_id":"0001112"}}}


id: SO:0000553
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The site on an RNA transcript to which will be added adenine residues by post-transcriptional polyadenylation. The boundary between the UTR and the polyA sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"},{"relation_name":"part_of","term_name":"mature_transcript","termid":"SO:0000233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_site","secondary_identifiers":["SO:0001430"],"synonyms":[{"name":"INSDC_feature:polyA_site","type":"exact"},{"name":"polyA cleavage site","type":"exact"},{"name":"polyA junction","type":"exact"},{"name":"polyA site","type":"exact"},{"name":"polyA_junction","type":"exact"},{"name":"polyadenylation site","type":"related"}],"termid":"SO:0000553"}


id: MONDO:0019839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypophysitis","termid":"MONDO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"panhypophysitis","secondary_identifiers":["Orphanet:95513","MEDGEN:1674527","UMLS:C5190786","GARD:19285"],"synonyms":[{"name":"Infundibulo-panhypophysitis","type":"exact"}],"termid":"MONDO:0019839","xrefs":{"Monarch":{"xref_id":"0019839"}}}


id: GO:0052191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host phagocytosis (obsolete GO:0052191)","synonyms":[{"name":"activation by symbiont of host phagocytosis","type":"narrow"},{"name":"stimulation by symbiont of host phagocytosis","type":"narrow"},{"name":"up regulation by symbiont of host phagocytosis","type":"exact"},{"name":"up-regulation by symbiont of host phagocytosis","type":"exact"},{"name":"upregulation by symbiont of host phagocytosis","type":"exact"}],"termid":"GO:0052191"}


id: PBO:0046655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"establishment of sister chromatid cohesion N-acetyltransferase 2","termid":"PBO:0046655"}


id: GO:0004856
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118148],"is_not":false,"summary":null,"term":"GO:0004856"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose + ATP = D-xylulose 5-phosphate + ADP + H+.","definition_xrefs":["RHEA:10964","EC:2.7.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"D-xylulokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:XYLULOKIN-RXN","Reactome:R-HSA-5662466","KEGG_REACTION:R01639"],"synonyms":[{"name":"ATP:D-xylulose 5-phosphotransferase activity","type":"related"},{"name":"xylulokinase (phosphorylating)","type":"related"},{"name":"xylulokinase activity","type":"broad"},{"name":"xylulose kinase activity","type":"related"}],"termid":"GO:0004856","terms_by_termid":{"GO:0004856":null}}


id: PBO:0062597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 7 pseudogene","termid":"PBO:0062597"}


id: GO:0015166
data:
  {"annotated_genes":["SJAG_03595","SJAG_04506"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91774,97240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a polyol from one side of a membrane to the other. A polyol is any polyhydric alcohol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"polyol transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429571"],"synonyms":[{"name":"sugar/polyol channel activity","type":"narrow"}],"termid":"GO:0015166","terms_by_termid":{"GO:0005366":null}}


id: PBO:0003561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA decapping complex subunit (predicted)","termid":"PBO:0003561"}


id: GO:0010116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid biosynthetic process","termid":"GO:0010115"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"abscisic acid biosynthetic process","termid":"GO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of abscisic acid biosynthetic process","synonyms":[{"name":"activation of abscisic acid biosynthetic process","type":"narrow"},{"name":"positive regulation of abscisic acid anabolism","type":"exact"},{"name":"positive regulation of abscisic acid biosynthesis","type":"exact"},{"name":"positive regulation of abscisic acid formation","type":"exact"},{"name":"positive regulation of abscisic acid synthesis","type":"exact"},{"name":"stimulation of abscisic acid biosynthetic process","type":"narrow"},{"name":"up regulation of abscisic acid biosynthetic process","type":"exact"},{"name":"up-regulation of abscisic acid biosynthetic process","type":"exact"},{"name":"upregulation of abscisic acid biosynthetic process","type":"exact"}],"termid":"GO:0010116"}


id: PBO:0043846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase X, M14 family member 1","termid":"PBO:0043846"}


id: GO:0042150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of DNA recombination occurring within a plasmid or between plasmids and other plasmids or DNA molecules.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"plasmid recombination","termid":"GO:0042150"}


id: GO:1901441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate).","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) metabolic process","termid":"GO:1901440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) biosynthetic process","synonyms":[{"name":"poly(hydroxyalkanoate) anabolism","type":"exact"},{"name":"poly(hydroxyalkanoate) biosynthesis","type":"exact"},{"name":"poly(hydroxyalkanoate) formation","type":"exact"},{"name":"poly(hydroxyalkanoate) synthesis","type":"exact"}],"termid":"GO:1901441"}


id: PBO:0069033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 278, pseudogene","termid":"PBO:0069033"}


id: PBO:0049860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECW2 antisense RNA 1","termid":"PBO:0049860"}


id: PBO:0004940
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of PIm","termid":"PBO:0004940"}


id: PBO:0044037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 9","termid":"PBO:0044037"}


id: GO:1904821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a chloroplast into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:26494759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast organization","termid":"GO:0009658"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast disassembly","synonyms":[{"name":"chloroplast degradation","type":"related"}],"termid":"GO:1904821"}


id: PBO:0084705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial hsp70-type molecular chaperone; required for assembly of iron/sulfur clusters into proteins at a step after cluster synthesis; involved in maturation of Grx5p and Yfh1p, which is a homolog of human frataxin implicated in Friedreich's ataxia","termid":"PBO:0084705"}


id: PBO:0070082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 39, pseudogene","termid":"PBO:0070082"}


id: PBO:0001811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring cleavage dioxygenase, pseudogene, single frameshift and no methionine","termid":"PBO:0001811"}


id: PBO:0049559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 21","termid":"PBO:0049559"}


id: FYPO:0005952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is normal (i.e. indistinguishable from wild type) in chromatin regions where RNA polymerase II actively transcribes genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning in euchromatin","termid":"FYPO:0000857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes","synonyms":[{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005952"}


id: PBO:0062250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BQ member 1 pseudogene","termid":"PBO:0062250"}


id: GO:0033774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region in the lower half of some cells formed from extensive infoldings of the basal plasma membrane; includes cytoplasm adjacent to the infolded membrane.","definition_xrefs":["PMID:11640882","GOC:mah","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal labyrinth","termid":"GO:0033774"}


id: GO:0022856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sorbitol(out) = protein histidine + sorbitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"sorbitol transmembrane transporter activity","termid":"GO:0015576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003824","GO:0022857","GO:0016740","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sorbitol phosphotransferase system transporter activity","synonyms":[{"name":"sorbitol PTS transporter activity","type":"exact"}],"termid":"GO:0022856"}


id: GO:0008143
data:
  {"annotated_genes":["SJAG_03448","SJAG_03283","SJAG_01910","SJAG_04601","SJAG_04271","SJAG_01650","SJAG_03214","SJAG_03747","SJAG_02808","SJAG_01222","SJAG_00425","SJAG_04427"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72289,73947,88292,88656,88695,91134,96309,96738,97713,103478,106881,108357],"is_not":false,"summary":null,"term":"GO:0008143"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-purine tract binding","termid":"GO:0070717"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_01222":null,"SJAG_01650":null,"SJAG_01910":null,"SJAG_02808":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03747":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"poly(A) binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A) binding, within an RNA molecule","type":"exact"},{"name":"poly(rA) binding","type":"exact"},{"name":"poly-A binding","type":"exact"},{"name":"polyadenylate binding","type":"exact"}],"termid":"GO:0008143","terms_by_termid":{"GO:0008143":null}}


id: MONDO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that involves the lungs, abdominal viscera, bones and or central nervous system.","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic mycosis","secondary_identifiers":["UMLS:C0553576","SCTID:399314004","ICD9:117.9","DOID:0050136","MEDGEN:639956"],"synonyms":[{"name":"systemic fungal infection","type":"related"}],"termid":"MONDO:0000256","xrefs":{"Monarch":{"xref_id":"0000256"}}}


id: GO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001197)","synonyms":[{"name":"activation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"stimulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"up regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"up-regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"upregulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"}],"termid":"GO:0001197"}


id: MONDO:0019578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nodular lichen myxedematosus is a rare form of localized lichen myxedematosus characterized by the development of skin-coloured mucinous nodules on the limbs and trunk, with mild or absent papular eruption.","definition_xrefs":["Orphanet:90393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nodular lichen myxedematosus","secondary_identifiers":["MEDGEN:894327","SCTID:717257000","UMLS:C4273968","GARD:19137"],"synonyms":[{"name":"atypical tuberous myxedema of Jadassohn-Dosseker","type":"exact"}],"termid":"MONDO:0019578","xrefs":{"Monarch":{"xref_id":"0019578"}}}


id: GO:0003251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cell proliferation that contributes to the shaping of a heart valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003250"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000138"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in heart valve morphogenesis","termid":"GO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003251"}


id: SO:1001254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is predicted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"predicted","termid":"SO:0000732"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_predicted","synonyms":[{"name":"CDS predicted","type":"exact"}],"termid":"SO:1001254"}


id: MONDO:0015227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic limb malformation (obsolete MONDO:0015227)","secondary_identifiers":["Orphanet:109011"],"synonyms":[{"name":"isolated limb malformation","type":"related"},{"name":"nonsyndromic limb malformation","type":"exact"}],"termid":"MONDO:0015227","xrefs":{"Monarch":{"xref_id":"0015227"}}}


id: PBO:0087891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor that regulates middle-sporulation genes; required for mitotic repression of middle sporulation-specific genes; also acts as general replication initiation factor; involved in telomere maintenance, chromatin silencing; regulated by pachytene checkpoint","termid":"PBO:0087891"}


id: GO:0010486
data:
  {"annotated_genes":["SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90408],"is_not":false,"summary":null,"term":"GO:0010486"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Mn2+(in) + H+(out) = Mn2+(out) + H+(in).","definition_xrefs":["PMID:17559518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"manganese:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"manganese:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0010486","terms_by_termid":{"GO:0010486":null}}


id: PBO:0065710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase like 1","termid":"PBO:0065710"}


id: PBO:0091925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane brefeldin A efflux transporter Bfr1","termid":"PBO:0091925"}


id: PBO:0071155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 20","termid":"PBO:0071155"}


id: GO:0090362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor production","termid":"GO:0090361"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor production","termid":"GO:0090360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor production","termid":"GO:0090362"}


id: GO:0102784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: lutein + 2 O2 = 3-hydroxy-beta-ionone + 3-hydroxy-alpha-ionone + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lutein oxygenase activity (obsolete GO:0102784)","termid":"GO:0102784"}


id: SO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An assembly region that has been sequenced from both ends resulting in a read_pair (mate_pair).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired_end_fragment","synonyms":[{"name":"paired end fragment","type":"exact"}],"termid":"SO:0001790"}


id: PBO:0052732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 24","termid":"PBO:0052732"}


id: MONDO:0013135
data:
  {"annotated_genes":["SJAG_01697"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85849],"is_not":false,"summary":null,"term":"MONDO:0013135"}]},"cv_name":"mondo","definition":"Any genetic hemophagocytic lymphohistiocytosis in which the cause of the disease is a mutation in the STXBP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial hemophagocytic lymphohistiocytosis 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:416514","DOID:0110925","GARD:15614","OMIM:613101","MESH:C567752","NANDO:2200731","UMLS:C2751293"],"synonyms":[{"name":"FHL5","type":"exact"},{"name":"HLH5","type":"exact"},{"name":"HPLH5","type":"exact"},{"name":"STXBP2 genetic hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"familial hemophagocytic lymphohistiocytosis type 5","type":"exact"},{"name":"genetic hemophagocytic lymphohistiocytosis caused by mutation in STXBP2","type":"exact"},{"name":"hemophagocytic lymphohistiocytosis, familial, 5","type":"related"},{"name":"hemophagocytic lymphohistiocytosis, familial, 5, with or without microvillus inclusion disease","type":"exact"},{"name":"hemophagocytic lymphohistiocytosis, familial, type 5","type":"exact"}],"termid":"MONDO:0013135","terms_by_termid":{"MONDO:0013135":null},"xrefs":{"Monarch":{"xref_id":"0013135"}}}


id: MONDO:0015364
data:
  {"annotated_genes":["SJAG_00773","SJAG_02119","SJAG_02016","SJAG_04178","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[86169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008086"},{"annotations":[86262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013337"},{"annotations":[84305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024309"},{"annotations":[85039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013634"},{"annotations":[86401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","definition":"An instance of sensory peripheral neuropathy that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory peripheral neuropathy","termid":"MONDO:0002321"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_02016":null,"SJAG_02119":null,"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C125386","MESH:D009477","Orphanet:140471","SCTID:11442006","UMLS:C0027889","ICD9:356.2","DOID:0050548","icd11.foundation:1091217288","GARD:12688","MEDGEN:14355","OMIMPS:162400"],"synonyms":[{"name":"CIP","type":"exact"},{"name":"HSAN","type":"exact"},{"name":"congenital insensitivity to pain","type":"exact"},{"name":"congenital pain insensitivity","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"hereditary sensory autonomic neuropathy","type":"related"},{"name":"hereditary sensory neuropathy","type":"exact"},{"name":"hereditary sensory peripheral neuropathy","type":"exact"},{"name":"indifference to pain, Congenital, autosomal recessive","type":"exact"}],"termid":"MONDO:0015364","terms_by_termid":{"MONDO:0008086":null,"MONDO:0010378":null,"MONDO:0013337":null,"MONDO:0013584":null,"MONDO:0013634":null,"MONDO:0024309":null},"xrefs":{"Monarch":{"xref_id":"0015364"}}}


id: MONDO:0060510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cohen-Gibson syndrome","secondary_identifiers":["UMLS:C4479654","GARD:16235","OMIM:617561","Orphanet:659396","MEDGEN:1386939"],"synonyms":[{"name":"COGIS","type":"related"},{"name":"Cohen-Gibson syndrome","type":"exact"}],"termid":"MONDO:0060510","xrefs":{"Monarch":{"xref_id":"0060510"}}}


id: MONDO:1010581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in bongo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, bongo","secondary_identifiers":["OMIA:000424-69297"],"termid":"MONDO:1010581","xrefs":{"Monarch":{"xref_id":"1010581"}}}


id: PBO:0043908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine receptor like factor 1","termid":"PBO:0043908"}


id: PBO:0077648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8","termid":"PBO:0077648"}


id: PBO:0080836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1","termid":"PBO:0080836"}


id: PATO:0000904
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000904 wild abortive value (obsolete PATO:0000904)","termid":"PATO:0000904"}


id: PBO:0045179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB1 pseudogene 1","termid":"PBO:0045179"}


id: PBO:0108930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 15, mitochondrial 12S rRNA N4-cytidine","termid":"PBO:0108930"}


id: GO:0060399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the growth hormone receptor signaling pathway. The growth hormone receptor signaling pathway is the series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of growth hormone receptor signaling pathway","termid":"GO:0060398"},{"relation_name":"positively_regulates","term_name":"growth hormone receptor signaling pathway","termid":"GO:0060396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of growth hormone receptor signaling pathway","synonyms":[{"name":"positive regulation of growth hormone receptor signalling pathway","type":"exact"}],"termid":"GO:0060399"}


id: GO:0008701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2-oxopentanoate = acetaldehyde + pyruvate.","definition_xrefs":["EC:4.1.3.39","RHEA:22624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-2-oxovalerate aldolase activity","secondary_identifiers":["KEGG_REACTION:R00750","UM-BBD_enzymeID:r0100","GO:0018804","MetaCyc:MHPELY-RXN"],"synonyms":[{"name":"4-hydroxy-2-ketovalerate aldolase activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate pyruvate-lyase (acetaldehyde-forming) activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate pyruvate-lyase activity","type":"related"},{"name":"4-hydroxy-2-oxovalerate pyruvate-lyase activity","type":"related"},{"name":"DmpG","type":"related"},{"name":"HOA","type":"related"}],"termid":"GO:0008701"}


id: GO:0140550
data:
  {"annotated_genes":["SJAG_02613","SJAG_02657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116663,118101],"is_not":false,"summary":null,"term":"GO:0140550"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of phosphatidylinositol-4,5-bisphosphate.","definition_xrefs":["PMID:33172987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid sensor activity","termid":"GO:0106254"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02613":null,"SJAG_02657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140299","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylinositol-4,5-bisphosphate sensing activity","type":"exact"}],"termid":"GO:0140550","terms_by_termid":{"GO:0140550":null}}


id: MONDO:0958005
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85310],"is_not":false,"summary":null,"term":"MONDO:0958005"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"is_obsolete":false,"name":"Hoxha-Aliu syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882736","OMIM:620662","MEDGEN:1846017"],"termid":"MONDO:0958005","terms_by_termid":{"MONDO:0958005":null},"xrefs":{"Monarch":{"xref_id":"0958005"}}}


id: GO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydropterin + H2O = 7,8-dihydrolumazine + NH3.","definition_xrefs":["GOC:jl","PMID:19567870","PMID:38786926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"dihydropterin deaminase activity","secondary_identifiers":["MetaCyc:RXN-15261"],"termid":"GO:0004153"}


id: CHEBI:171741
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerulenin","termid":"CHEBI:171741"}


id: GO:1904711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Wnt-Frizzled-LRP5/6 complex assembly.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"Wnt-Frizzled-LRP5/6 complex assembly","termid":"GO:1904701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of Wnt-Frizzled-LRP5/6 complex assembly","synonyms":[{"name":"regulation of Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"regulation of Wnt receptor complex assembly","type":"broad"},{"name":"regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"}],"termid":"GO:1904711"}


id: MONDO:1011942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dwarfism, non-human animal","secondary_identifiers":["OMIA:000303"],"termid":"MONDO:1011942","xrefs":{"Monarch":{"xref_id":"1011942"}}}


id: PBO:0044253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWF19 like cell cycle control factor 1","termid":"PBO:0044253"}


id: PBO:0080783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 3","termid":"PBO:0080783"}


id: PATO:0001381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing three homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Triploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triploid","termid":"PATO:0001381"}


id: GO:0019826
data:
  {"annotated_genes":["SJAG_03828","SJAG_02945","SJAG_02135","SJAG_00027","SJAG_00642","SJAG_06621","SJAG_06622","SJAG_03903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108118,108119,108120,108121,108122,108123,108124,110859],"is_not":false,"summary":null,"term":"GO:0019826"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of oxygen (O2).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00642":null,"SJAG_02135":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0140299","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"oxygen sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019826","terms_by_termid":{"GO:0019826":null}}


id: PR:Q9P6L2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set13 gene.","definition_xrefs":["UniProtKB:Q9P6L2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine N-methyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.14","synonyms":[{"name":"SET domain-containing protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set13","type":"exact"}],"termid":"PR:Q9P6L2"}


id: PBO:0003368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial D-lactate dehydrogenase, cytochrome (predicted)","termid":"PBO:0003368"}


id: MONDO:1011887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia and internal hydrocephalus, non-human animal","secondary_identifiers":["OMIA:001663"],"termid":"MONDO:1011887","xrefs":{"Monarch":{"xref_id":"1011887"}}}


id: PBO:0084403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysine permease; one of three amino acid permeases (Alp1p, Can1p, Lyp1p) responsible for uptake of cationic amino acids","termid":"PBO:0084403"}


id: PBO:0039577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 6","termid":"PBO:0039577"}


id: PBO:0073525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing 19","termid":"PBO:0073525"}


id: PR:Q09738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase 27 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00228","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.04c","secondary_identifiers":["UniProtKB:Q09738"],"synonyms":[{"name":"Spom972h-USP27X","type":"exact"},{"name":"deubiquitinating enzyme 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09738"}


id: GO:0046322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fatty acid oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"regulation of fatty acid oxidation","termid":"GO:0046320"},{"relation_name":"negatively_regulates","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of fatty acid oxidation","synonyms":[{"name":"down regulation of fatty acid oxidation","type":"exact"},{"name":"down-regulation of fatty acid oxidation","type":"exact"},{"name":"downregulation of fatty acid oxidation","type":"exact"},{"name":"inhibition of fatty acid oxidation","type":"narrow"}],"termid":"GO:0046322"}


id: PBO:0064530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit G pseudogene 2","termid":"PBO:0064530"}


id: GO:0018700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-chloro-N-isopropylacetanilide + H+ + 2 e- = Cl- + N-isopropylacetanilide.","definition_xrefs":["UM-BBD_reactionID:r0719"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-N-isopropylacetanilide reductive dehalogenase activity (obsolete GO:0018700)","termid":"GO:0018700"}


id: GO:0014006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglia differentiation, the process in which a relatively unspecialized cell acquires specialized features of a microglial cell.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage differentiation","termid":"GO:0045649"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglia differentiation","synonyms":[{"name":"regulation of microglial cell differentiation","type":"exact"}],"termid":"GO:0014006"}


id: GO:1901394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta1 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta1 activation (obsolete GO:1901394)","synonyms":[{"name":"activation of L-TGF-beta 1 activation","type":"exact"},{"name":"activation of TGF-beta 1 activation","type":"exact"},{"name":"activation of TGFB1 activation","type":"exact"},{"name":"activation of TGFbeta 1 activation","type":"exact"},{"name":"activation of latent-TGF-beta1 activation","type":"exact"},{"name":"activation of transforming growth factor beta1 activation","type":"narrow"},{"name":"activation of transforming growth factor-beta1 activation","type":"exact"},{"name":"positive regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"positive regulation of TGF-beta 1 activation","type":"exact"},{"name":"positive regulation of TGFB1 activation","type":"exact"},{"name":"positive regulation of TGFbeta 1 activation","type":"exact"},{"name":"positive regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"positive regulation of transforming growth factor-beta1 activation","type":"exact"},{"name":"up regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"up regulation of TGF-beta 1 activation","type":"exact"},{"name":"up regulation of TGFB1 activation","type":"exact"},{"name":"up regulation of TGFbeta 1 activation","type":"exact"},{"name":"up regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta1 activation","type":"exact"},{"name":"up regulation of transforming growth factor-beta1 activation","type":"exact"},{"name":"up-regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"up-regulation of TGF-beta 1 activation","type":"exact"},{"name":"up-regulation of TGFB1 activation","type":"exact"},{"name":"up-regulation of TGFbeta 1 activation","type":"exact"},{"name":"up-regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta1 activation","type":"exact"},{"name":"up-regulation of transforming growth factor-beta1 activation","type":"exact"},{"name":"upregulation of L-TGF-beta 1 activation","type":"exact"},{"name":"upregulation of TGF-beta 1 activation","type":"exact"},{"name":"upregulation of TGFB1 activation","type":"exact"},{"name":"upregulation of TGFbeta 1 activation","type":"exact"},{"name":"upregulation of latent-TGF-beta1 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta1 activation","type":"exact"},{"name":"upregulation of transforming growth factor-beta1 activation","type":"exact"}],"termid":"GO:1901394"}


id: FYPO:0006197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, has one nucleus, and has normal length but a greater diameter than normal.","definition_xrefs":["PomBase:mah","PMID:20805322"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"normal vegetative cell length","termid":"FYPO:0003503"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable mononucleate vegetative cell, with normal cell length and increased cell diameter","synonyms":[{"name":"inviable mononucleate cell, with normal cell length and increased cell diameter, during vegetative growth","type":"exact"},{"name":"inviable mononucleate vegetative cell, with increased cell diameter and normal cell length","type":"exact"},{"name":"inviable mononucleate vegetative cell, with normal cell length and increased cell diameter during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate vegetative cell, with normal length and increased diameter","type":"exact"},{"name":"inviable swollen mononucleate vegetative cell, with normal cell length","type":"related"},{"name":"lethal; mononucleate vegetative cell, with normal cell length and increased cell diameter","type":"exact"}],"termid":"FYPO:0006197"}


id: PBO:0036324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor Coa2 (predicted)","termid":"PBO:0036324"}


id: PR:Q9P802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis18 gene.","definition_xrefs":["UniProtKB:Q9P802","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein mis18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.12","synonyms":[{"name":"Spom972h-mis18","type":"exact"}],"termid":"PR:Q9P802"}


id: GO:2000385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ectoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of ectoderm development","termid":"GO:2000383"},{"relation_name":"positively_regulates","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ectoderm development","termid":"GO:2000385"}


id: PBO:0058646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6775","termid":"PBO:0058646"}


id: PBO:0036005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_and_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036005"}


id: PBO:0029400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleoplasm","termid":"PBO:0029400"}


id: GO:0030391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine biosynthetic process","synonyms":[{"name":"fructosamine anabolism","type":"exact"},{"name":"fructosamine biosynthesis","type":"exact"},{"name":"fructosamine formation","type":"exact"},{"name":"fructosamine synthesis","type":"exact"}],"termid":"GO:0030391"}


id: PBO:0088208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Novel ORF identified by enrichment-based proteomics","termid":"PBO:0088208"}


id: PBO:0083024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; originally included in genome annotation, but later deleted due to sequence correction","termid":"PBO:0083024"}


id: PBO:0039012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 like ATPase","termid":"PBO:0039012"}


id: GO:0047101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [a branched-chain alpha-keto acid] + CoA + NAD+ = [a branched-chain acyl-CoA] + CO2 + NADH. This enzyme system catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs.","definition_xrefs":["EC:1.2.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"branched-chain alpha-keto acid dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.25-RXN"],"synonyms":[{"name":"2-oxoisovalerate dehydrogenase (acylating) activity","type":"narrow"},{"name":"2-oxoisovalerate dehydrogenase activity","type":"related"},{"name":"3-methyl-2-oxobutanoate:NAD+ 2-oxidoreductase (CoA-methyl-propanoylating)","type":"related"}],"termid":"GO:0047101"}


id: MONDO:0005479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of an organized, regular atrial rhythm with atrial rate between 101 and 240 beats per minute. The P wave morphology must be distinct from the sinus P wave morphology. (CDISC)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial tachycardia","secondary_identifiers":["ICD9:427.89","UMLS:C0546959","EFO:0005308","MEDGEN:107485","NANDO:2200218","SCTID:276796006","NCIT:C35481"],"termid":"MONDO:0005479","xrefs":{"Monarch":{"xref_id":"0005479"}}}


id: GO:0019552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-hydroxyglutarate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P162-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glutamate catabolic process","termid":"GO:0019670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glutamate catabolic process via 2-hydroxyglutarate","synonyms":[{"name":"glutamate fermentation via 2-hydroxyglutarate","type":"exact"}],"termid":"GO:0019552"}


id: GO:0044408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont regulates the increase in its size or mass, or its progression from an initial condition to a later condition, within the cells or tissues of the host organism.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont on or near host (obsolete GO:0044408)","synonyms":[{"name":"growth or development of organism on or near host surface","type":"exact"},{"name":"growth or development of symbiont on or near host","type":"exact"}],"termid":"GO:0044408"}


id: MONDO:0011921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aural atresia, congenital","secondary_identifiers":["GARD:18275","MESH:C564321","OMIM:607842","UMLS:C1842937","MEDGEN:375051"],"synonyms":[{"name":"CAA","type":"related"},{"name":"aural atresia, congenital","type":"exact"},{"name":"aural atresia, congenital, with hyposmia","type":"related"}],"termid":"MONDO:0011921","xrefs":{"Monarch":{"xref_id":"0011921"}}}


id: GO:0090358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of tryptophan metabolic process","termid":"GO:0090357"},{"relation_name":"positively_regulates","term_name":"tryptophan metabolic process","termid":"GO:0006568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"positive regulation of tryptophan metabolic process","synonyms":[{"name":"positive regulation of tryptophan metabolism","type":"exact"}],"termid":"GO:0090358"}


id: PBO:0078373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalase","termid":"PBO:0078373"}


id: GO:0046488
data:
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