# terms

id: PBO:0079673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 3","termid":"PBO:0079673"}


id: PBO:0080944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger B-box domain containing","termid":"PBO:0080944"}


id: GO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response to an antigenic stimulus, which can be include any number of T cell or B cell epitopes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"},{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}


id: PBO:0083090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding transcriptional activator; mediates serine/threonine activation of the catabolic L-serine (L-threonine) deaminase (CHA1); Zinc-finger protein with Zn[2]-Cys[6] fungal-type binuclear cluster domain","termid":"PBO:0083090"}


id: PBO:0064142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKN2 antisense RNA 1","termid":"PBO:0064142"}


id: GO:1903296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate secretion, where glutamate acts as a neurotransmitter.","definition_xrefs":["PMID:16782817","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of glutamate secretion","termid":"GO:0014049"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, glutamatergic","termid":"GO:0051968"},{"relation_name":"is_a","term_name":"regulation of glutamate secretion, neurotransmission","termid":"GO:1903294"},{"relation_name":"positively_regulates","term_name":"glutamate secretion, neurotransmission","termid":"GO:0061535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glutamate secretion, neurotransmission","synonyms":[{"name":"activation of glutamate secretion, neurotransmission","type":"narrow"},{"name":"up regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"up-regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"upregulation of glutamate secretion, neurotransmission","type":"exact"}],"termid":"GO:1903296"}


id: PBO:0078284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 17-1","termid":"PBO:0078284"}


id: GO:0007150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process whereby cells develop a specific morphology under a specific set of circumstances.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete growth pattern (obsolete GO:0007150)","synonyms":[{"name":"growth pattern","type":"exact"}],"termid":"GO:0007150"}


id: GO:0045738
data:
  {"annotated_genes":["SJAG_03048","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[110902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA repair.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"negatively_regulates","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA repair","type":"exact"},{"name":"down-regulation of DNA repair","type":"exact"},{"name":"downregulation of DNA repair","type":"exact"},{"name":"inhibition of DNA repair","type":"narrow"}],"termid":"GO:0045738","terms_by_termid":{"GO:1904332":null,"GO:2001033":null}}


id: GO:1903547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of growth hormone activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:mr","PMID:3068266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of growth hormone activity","synonyms":[{"name":"regulation of GH activity","type":"exact"},{"name":"regulation of pituitary growth hormone activity","type":"narrow"},{"name":"regulation of placental growth hormone activity","type":"narrow"}],"termid":"GO:1903547"}


id: MONDO:0006517
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant tumor that occurs in children. Representative examples include soft tissue and bone sarcomas (e.g. osteosarcoma) and embryonal neoplasms (e.g. hepatoblastoma and rhabdoid tumor).","definition_xrefs":["NCIT:C4005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood malignant neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000654","UMLS:C0278704","MEDGEN:82962"],"synonyms":[{"name":"childhood cancer","type":"exact"},{"name":"childhood malignant neoplasm","type":"exact"},{"name":"childhood neoplasm, malignant","type":"exact"},{"name":"malignant childhood neoplasm","type":"exact"},{"name":"malignant childhood tumor","type":"exact"},{"name":"malignant childhood tumour","type":"exact"},{"name":"malignant neoplasm","type":"narrow"},{"name":"malignant paediatric neoplasm","type":"exact"},{"name":"malignant paediatric tumour","type":"exact"},{"name":"malignant pediatric neoplasm","type":"exact"},{"name":"malignant pediatric tumor","type":"exact"},{"name":"paediatric cancer","type":"exact"},{"name":"pediatric cancer","type":"exact"}],"termid":"MONDO:0006517","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0006517"}}}


id: PBO:0045631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 43 (pseudogene)","termid":"PBO:0045631"}


id: GO:0003975
data:
  {"annotated_genes":["SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102749],"is_not":false,"summary":null,"term":"GO:0003975"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UMP + N-acetyl-D-glucosaminyl-diphosphodolichol.","definition_xrefs":["EC:2.7.8.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:13289","MetaCyc:2.7.8.15-RXN","Reactome:R-HSA-4549334","Reactome:R-HSA-446191"],"synonyms":[{"name":"GlcNAc-1-P transferase activity","type":"related"},{"name":"N-acetylglucosamine-1-phosphate transferase activity","type":"related"},{"name":"UDP-D-N-acetylglucosamine N-acetylglucosamine 1-phosphate transferase activity","type":"related"},{"name":"UDP-GlcNAc:dolichyl-phosphate GlcNAc-1-phosphate transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:dolichol phosphate N-acetyl-D-glucosamine-1-phosphate transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:dolichyl-phosphate N-acetyl-D-glucosaminephosphotransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosamine-1-phosphate transferase activity","type":"exact"},{"name":"UDP-acetylglucosamine-dolichol phosphate acetylglucosamine phosphotransferase activity","type":"related"},{"name":"UDP-acetylglucosamine-dolichol phosphate acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"chitobiosylpyrophosphoryldolichol synthase activity","type":"related"},{"name":"dolichol phosphate N-acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-dolichyl phosphate acetylglucosamine-1-phosphotransferase activity","type":"related"}],"termid":"GO:0003975","terms_by_termid":{"GO:0003975":null}}


id: GO:0046295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycolate, the anion of hydroxyethanoic acid (glycolic acid).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolate metabolic process","termid":"GO:0009441"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycolate biosynthetic process","synonyms":[{"name":"glycolate anabolism","type":"exact"},{"name":"glycolate biosynthesis","type":"exact"},{"name":"glycolate formation","type":"exact"},{"name":"glycolate synthesis","type":"exact"}],"termid":"GO:0046295"}


id: FYPO:0006924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates at or near replication fork barriers is lower than normal.","definition_xrefs":["PomBase:mah","PMID:31149897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased number of Rad52 foci during vegetative growth","termid":"FYPO:0004516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased number of Rad52 foci at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased number of Rad22 foci at mitotic DNA replication fork barriers","type":"exact"},{"name":"decreased number of Rad52 foci at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased number of Rad52 foci at mitotic DNA replication fork barriers during vegetative growth","type":"related"},{"name":"reduced number of Rad52 foci at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006924"}


id: MONDO:0015241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis-like syndrome, also known as Kuskokwim disease, is a very rare congenital contracture disorder, reported exclusively in Yup'ik Eskimos of the Kuskokwim River delta region of Alaska, characterized by multiple contractures of large joints (predominantly the knees and ankles) that present at birth or during childhood but are lifelong; deformities of the spine, pelvis and feet; and sometimes proximally or distally displaced patellae and muscle atrophy in the limbs with contractures. Additional radiological features include mild vertebral wedging, elongation of the vertebral pedicle, and clubbing of the distal clavicle. An autosomal recessive pattern of inheritance has been suggested.","definition_xrefs":["Orphanet:1149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-like syndrome","secondary_identifiers":["GARD:3150","ICD9:719.89","OMIM:208200","SCTID:702447002","MEDGEN:349229","UMLS:C1859709"],"synonyms":[{"name":"Kuskokwim disease","type":"exact"},{"name":"Kuskokwim syndrome","type":"related"},{"name":"arthrogryposis like disorder","type":"related"}],"termid":"MONDO:0015241","xrefs":{"Monarch":{"xref_id":"0015241"}}}


id: MONDO:0014122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myofibromatosis in which the cause of the disease is a mutation in the NOTCH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile myofibromatosis","termid":"MONDO:0016824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myofibromatosis, infantile, 2","secondary_identifiers":["GARD:15939","OMIM:615293","MEDGEN:815414","UMLS:C3809084"],"synonyms":[{"name":"IMF2","type":"related"},{"name":"NOTCH3 myofibromatosis","type":"exact"},{"name":"myofibromatosis caused by mutation in NOTCH3","type":"exact"},{"name":"myofibromatosis, infantile 2","type":"exact"},{"name":"myofibromatosis, infantile, 2","type":"exact"},{"name":"myofibromatosis, infantile, type 2","type":"exact"}],"termid":"MONDO:0014122","xrefs":{"Monarch":{"xref_id":"0014122"}}}


id: MONDO:0012655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"juvenile myoclonic epilepsy","termid":"MONDO:0009696"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonic epilepsy, juvenile, susceptibility to, 4","secondary_identifiers":["OMIM:611364","MEDGEN:370067","DOID:0111327","UMLS:C1969656"],"synonyms":[{"name":"EJM4","type":"exact"},{"name":"myoclonic epilepsy, juvenile, 4","type":"exact"},{"name":"myoclonic epilepsy, juvenile, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0012655","xrefs":{"Monarch":{"xref_id":"0012655"}}}


id: SO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragile site found in the chromosomes of less than five percent of the human population.","definition_xrefs":["PMID:17608616","PMID:16236432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragile_site","termid":"SO:0002349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rare_fragile_site","termid":"SO:0002351"}


id: FYPO:0005386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin along chromosome arms is decreased.","definition_xrefs":["PomBase:mah","PMID:16682348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at chromosome arms","synonyms":[{"name":"decreased protein localisation to chromatin at chromosome arms","type":"exact"},{"name":"decreased protein localization to chromatin along chromosome arms","type":"exact"},{"name":"decreased protein localization to chromatin at chromosome arms during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromosome arms during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at chromosome arms","type":"exact"}],"termid":"FYPO:0005386"}


id: PBO:0046754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 7","termid":"PBO:0046754"}


id: FYPO:0005163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to heat is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during cellular response to heat","synonyms":[{"name":"increased RNA accumulation during cellular response to heat","type":"related"},{"name":"increased RNA level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to heat during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to high temperature","type":"exact"},{"name":"increased mRNA level during cellular response to heat","type":"narrow"},{"name":"increased transcript level during cellular response to heat","type":"exact"}],"termid":"FYPO:0005163"}


id: PR:O74959
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinol dehydrogenase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C736.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.13","secondary_identifiers":["UniProtKB:O74959"],"synonyms":[{"name":"Spom972h-RDH13","type":"exact"}],"termid":"PR:O74959"}


id: MONDO:0041775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"intraoperative floppy iris syndrome","secondary_identifiers":["UMLS:C1688637","SCTID:418801006","MEDGEN:739048"],"synonyms":[{"name":"intraoperative floppy iris syndrome","type":"exact"}],"termid":"MONDO:0041775","xrefs":{"Monarch":{"xref_id":"0041775"}}}


id: PBO:0027284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_salt_stress","termid":"PBO:0027284"}


id: PBO:0015247
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(5)","termid":"PBO:0015247"}


id: PBO:0034214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_activates","termid":"PBO:0034214"}


id: MONDO:0007964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clinically atypical nevi (usually exceeding 5 mm in diameter and having variable pigmentation and ill defined borders) with an increased risk for development of non-familial cutaneous malignant melanoma. Biopsies show melanocytic dysplasia. Nevi are clinically and histologically identical to the precursor lesions for melanoma in the B-K mole syndrome. (Stedman, 25th ed)","definition_xrefs":["MESH:D004416"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 2","secondary_identifiers":["NCIT:C7584","OMIM:155601","MEDGEN:331891","UMLS:C1835044","DOID:10041"],"synonyms":[{"name":"Atypical Mole syndrome","type":"exact"},{"name":"B-K Mole syndrome","type":"exact"},{"name":"CMM2","type":"related"},{"name":"dysplastic nevus syndrome","type":"exact"},{"name":"familial dysplastic nevi","type":"exact"},{"name":"melanoma, cutaneous malignant, 2","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 2","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 2","type":"related"}],"termid":"MONDO:0007964","xrefs":{"Monarch":{"xref_id":"0007964"}}}


id: GO:1900707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tensidol A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"tensidol A biosynthetic process","termid":"GO:1900605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of tensidol A biosynthetic process","synonyms":[{"name":"regulation of tensidol A anabolism","type":"exact"},{"name":"regulation of tensidol A biosynthesis","type":"exact"},{"name":"regulation of tensidol A formation","type":"exact"},{"name":"regulation of tensidol A synthesis","type":"exact"}],"termid":"GO:1900707"}


id: GO:0072107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of the developmental process pertaining to the initial formation of the ureteric bud from the Wolffian duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ureteric bud formation","termid":"GO:0072106"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"positive regulation of epithelial tube formation","termid":"GO:1905278"},{"relation_name":"positively_regulates","term_name":"ureteric bud formation","termid":"GO:0060676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ureteric bud formation","termid":"GO:0072107"}


id: PBO:0074354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC2 divergent transcript","termid":"PBO:0074354"}


id: PBO:0083553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene DID2/YKR035W-A","termid":"PBO:0083553"}


id: FYPO:0007068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin located in heterochromatin at subtelomeric regions is higher than in wild type. In cells with increased origin firing efficiency, genomic DNA replication initiates from more origins than wild type, and is completed in more, smaller segments, than wild type.","definition_xrefs":["PomBase:mah","PMID:18093330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased origin firing efficiency","termid":"FYPO:0001249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased origin firing efficiency in subtelomeric heterochromatin","synonyms":[{"name":"increased origin firing efficiency at subtelomeric heterochromatin","type":"exact"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased origin firing efficiency in telomeric heterochromatin","type":"related"}],"termid":"FYPO:0007068"}


id: GO:0090027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of monocyte chemotaxis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of monocyte chemotaxis","termid":"GO:0090025"},{"relation_name":"negatively_regulates","term_name":"monocyte chemotaxis","termid":"GO:0002548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte chemotaxis","termid":"GO:0090027"}


id: PBO:0040207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTN2 antisense RNA 1","termid":"PBO:0040207"}


id: PBO:0027789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_cell_with_decreased_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0027789"}


id: GO:0031883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a taste receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"taste receptor binding","synonyms":[{"name":"taste receptor ligand","type":"narrow"}],"termid":"GO:0031883"}


id: PBO:0027030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nuclear_envelope","termid":"PBO:0027030"}


id: PBO:0059170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin protein zero like 1","termid":"PBO:0059170"}


id: CHEBI:17191
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine","termid":"CHEBI:17191"}


id: GO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"beta-alanine transport","termid":"GO:0001762"}


id: PBO:0056439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 12","termid":"PBO:0056439"}


id: PBO:0087360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spore-specific water channel; mediates the transport of water across cell membranes, developmentally controlled; may play a role in spore maturation, probably by allowing water outflow, may be involved in freeze tolerance","termid":"PBO:0087360"}


id: PBO:0064363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMF1-BGLAP readthrough","termid":"PBO:0064363"}


id: PBO:0065056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 10","termid":"PBO:0065056"}


id: GO:0006079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (1->6)-beta-D-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->6)-beta-D-glucan metabolic process","termid":"GO:0006077"},{"relation_name":"is_a","term_name":"beta-glucan catabolic process","termid":"GO:0051275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan catabolic process","synonyms":[{"name":"1,6-beta-D-glucan breakdown","type":"exact"},{"name":"1,6-beta-D-glucan catabolic process","type":"exact"},{"name":"1,6-beta-D-glucan catabolism","type":"exact"},{"name":"1,6-beta-D-glucan degradation","type":"exact"},{"name":"beta-1,6 glucan breakdown","type":"exact"},{"name":"beta-1,6 glucan catabolic process","type":"exact"},{"name":"beta-1,6 glucan catabolism","type":"exact"},{"name":"beta-1,6 glucan degradation","type":"exact"}],"termid":"GO:0006079"}


id: PBO:0072176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 3","termid":"PBO:0072176"}


id: PBO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1941 family protein","termid":"PBO:0005231"}


id: MONDO:0008391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Robinow-Sorauf syndrome","secondary_identifiers":["GARD:4730","OMIM:180750","UMLS:C1867146","MEDGEN:356703","icd11.foundation:1272297510","MESH:C537183","Orphanet:3106"],"synonyms":[{"name":"Robinow-Sorauf syndrome","type":"exact"},{"name":"acrocephalosyndactyly, Robinow-Sorauf type","type":"related"},{"name":"craniosynostosis-bifid hallux syndrome","type":"related"}],"termid":"MONDO:0008391","xrefs":{"Monarch":{"xref_id":"0008391"}}}


id: GO:0050934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a late stripe melanocyte (LSM). In zebrafish, LSMs develop during the second phase (3-4 weeks of development) of the larva-to-adult transition (2-4 weeks of development).","definition_xrefs":["PMID:11858836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocyte differentiation","termid":"GO:0030318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"late stripe melanocyte differentiation","synonyms":[{"name":"late stripe melanocyte cell differentiation","type":"exact"},{"name":"late stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050934"}


id: GO:0044296
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization found in some types of dendrites which consists of numerous small terminal branches, giving the dendrite a tufted appearance.","definition_xrefs":["NIF_Subcellular:sao1340260079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic tuft","synonyms":[{"name":"dendrite tuft","type":"exact"}],"termid":"GO:0044296"}


id: GO:0098951
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic recycling endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic recycling endosome membrane (obsolete GO:0098951)","synonyms":[{"name":"intrinsic to postsynaptic recycling endosome membrane","type":"exact"}],"termid":"GO:0098951"}


id: MONDO:0008425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Shprintzen-Goldberg omphalocele syndrome is a very rare inherited malformation syndrome characterized by omphalocele, scoliosis, mild dysmorphic features (downslanted palpebral fissures, s-shaped eyelids and thin upper lip), laryngeal and pharyngeal hypoplasia and learning disabilities.","definition_xrefs":["Orphanet:3164"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele syndrome, Shprintzen-Goldberg type","secondary_identifiers":["GARD:9850","MESH:C537329","OMIM:182210","SCTID:716230005","MEDGEN:356653","UMLS:C1866958"],"synonyms":[{"name":"Shprintzen omphalocele syndrome","type":"related"},{"name":"Shprintzen-Goldberg omphalocele syndrome","type":"related"},{"name":"laryngeal and pharyngeal hypoplasia with omphalocele","type":"related"},{"name":"omphalocele with hypoplasia of pharynx and larynx, learning disability, dysmorphic facies, and scoliosis","type":"related"},{"name":"omphalocele, laryngeal and pharyngeal hypoplasia, learning disabilities, dysmorphic facies and spinal anomalies","type":"related"},{"name":"pharynx and larynx hypoplasia with omphalocele","type":"related"}],"termid":"MONDO:0008425","xrefs":{"Monarch":{"xref_id":"0008425"}}}


id: GO:0099093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion (Ca2+) is transported out of the mitochondrial matrix, and into the cytosol.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial calcium ion transmembrane transport","termid":"GO:0006851"},{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"calcium export from the mitochondrion","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion","type":"exact"},{"name":"mitochondrial calcium ion export","type":"broad"},{"name":"mitochondrial calcium release","type":"exact"}],"termid":"GO:0099093"}


id: GO:0006582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"melanin metabolic process","synonyms":[{"name":"melanin metabolism","type":"exact"}],"termid":"GO:0006582"}


id: PBO:0065797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 4","termid":"PBO:0065797"}


id: GO:0061967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial formation of the type asymmetry in an organism's body plan or part of an organism that established the pattern characteristic to its left side.","definition_xrefs":["GOC:BHF","GOC:18629866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of left/right asymmetry","termid":"GO:0061966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of left sidedness","termid":"GO:0061967"}


id: FYPO:0001949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular calcium level","termid":"FYPO:0001198"},{"relation_name":"is_a","term_name":"increased level of substance in cytosol","termid":"FYPO:0001948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cytosolic calcium level","synonyms":[{"name":"increased cytosolic calcium ion level","type":"exact"},{"name":"increased cytosolic calcium ion level during vegetative growth","type":"exact"},{"name":"increased cytosolic calcium level during mitotic cell cycle","type":"related"},{"name":"increased level of calcium ions in cytosol","type":"exact"},{"name":"increased levels of free cytosolic calcium","type":"exact"}],"termid":"FYPO:0001949"}


id: MONDO:0019667
data:
  {"annotated_genes":["SJAG_03467"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010737"}]},"cv_name":"mondo","definition":"Spondyloepiphyseal dysplasia tarda (SEDT) is characterized by disproportionate short stature in adolescence or adulthood, associated with a short trunk and arms and barrel-shaped chest.","definition_xrefs":["Orphanet:93284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia tarda","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1732","DOID:0112284","ICD9:756.9","SCTID:51952004"],"termid":"MONDO:0019667","terms_by_termid":{"MONDO:0010737":null},"xrefs":{"Monarch":{"xref_id":"0019667"}}}


id: MONDO:0100177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing allergic rhinitis.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allergic rhinitis, susceptibility to","secondary_identifiers":["MEDGEN:865977","OMIM:607154","UMLS:C4017540"],"synonyms":[{"name":"allergic rhinitis, susceptibility to","type":"exact"}],"termid":"MONDO:0100177","xrefs":{"Monarch":{"xref_id":"0100177"}}}


id: PBO:0084866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; genetic interactions suggest a possible role in promoting translation initiation","termid":"PBO:0084866"}


id: GO:0050940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of late stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanocyte differentiation","termid":"GO:0045634"},{"relation_name":"regulates","term_name":"late stripe melanocyte differentiation","termid":"GO:0050934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of late stripe melanocyte differentiation","synonyms":[{"name":"regulation of late stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050940"}


id: PBO:0042521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK2AP1 pseudogene 1","termid":"PBO:0042521"}


id: GO:0005138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-6 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-6 receptor binding","synonyms":[{"name":"IL-6","type":"narrow"},{"name":"interleukin-6 receptor ligand","type":"narrow"}],"termid":"GO:0005138"}


id: GO:0010031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organismal movement by which the tip of a plant organ follows a spiral pattern as a consequence of growth.","definition_xrefs":["ISBN:0192801023","GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal movement","termid":"GO:0050879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circumnutation","termid":"GO:0010031"}


id: PBO:0091560
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Morphology and Distribution","termid":"PBO:0091560"}


id: PBO:0027425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_ionizing_radiation","termid":"PBO:0027425"}


id: GO:0048356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"root epithelial mucilage metabolic process","termid":"GO:0048361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epithelial mucilage biosynthetic process","synonyms":[{"name":"root epithelial mucilage anabolism","type":"exact"},{"name":"root epithelial mucilage biosynthesis","type":"exact"},{"name":"root epithelial mucilage formation","type":"exact"},{"name":"root epithelial mucilage synthesis","type":"exact"}],"termid":"GO:0048356"}


id: GO:0018577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: catechol + O2 = 2-hydroxymuconate semialdehyde.","definition_xrefs":["RHEA:17337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"catechol 2,3-dioxygenase activity","secondary_identifiers":["EC:1.13.11.2","MetaCyc:CATECHOL-23-DIOXYGENASE-RXN","UM-BBD_enzymeID:r0307"],"synonyms":[{"name":"2,3-pyrocatechase activity","type":"related"},{"name":"catechol 2,3-oxygenase","type":"related"},{"name":"catechol oxygenase","type":"related"},{"name":"catechol:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"cato2ase activity","type":"related"},{"name":"metapyrocatechase activity","type":"related"},{"name":"pyrocatechol 2,3-dioxygenase","type":"related"}],"termid":"GO:0018577"}


id: PBO:0069089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 336, pseudogene","termid":"PBO:0069089"}


id: GO:0160006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process mediated by the Fc receptor for the purpose of delivery of antigen-bound immunoglobulin to an intracellular compartment where the antigen can be processed and loaded onto MHC molecules. This process selectively targets antigens for presentation by MHC class II or cross-presentation by MHC class I.","definition_xrefs":["PMID:9463401","PMID:28389502","PMID:9143687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"Fc receptor-mediated immune complex endocytosis","synonyms":[{"name":"Fc receptor-mediated immune complex internalization","type":"related"},{"name":"Ig-complexed antigen endocytosis via Fc receptor","type":"exact"},{"name":"antigen-antibody immune complex uptake via Fc receptor","type":"exact"}],"termid":"GO:0160006"}


id: PBO:0069345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 605, pseudogene","termid":"PBO:0069345"}


id: FYPO:0008299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange between the plasma membrane and the cytosol is decreased.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0005544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of protein exchange at plasma membrane","termid":"FYPO:0008299"}


id: MONDO:0100424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly NRAS gene mutation. (A change in the structure of the NRAS gene.)","definition_xrefs":["NCIT:C41381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, NRAS gene mutation","synonyms":[{"name":"AML, N-RAS Gene Mutation","type":"exact"},{"name":"AML, NRAS gene mutation","type":"exact"},{"name":"AML, Neuroblastoma RAS Viral Oncogene Homolog Gene Mutation","type":"exact"}],"termid":"MONDO:0100424","xrefs":{"Monarch":{"xref_id":"0100424"}}}


id: MONDO:0022460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anophthalmia cleft lip palate hypothalamic disorder (obsolete MONDO:0022460)","termid":"MONDO:0022460","xrefs":{"Monarch":{"xref_id":"0022460"}}}


id: MOD:00298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues, an L-glutamic acid residue, an L-histidine residue, an L-serine residue and a one-nickel three-iron three-sulfur three-oxygen cluster to tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0293","PubMed:2550436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"nickel containing modified residue","termid":"MOD:00741"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","synonyms":[{"name":"Ni-3Fe-2S-3O cluster","type":"exact"},{"name":"carbon monoxide dehydrogenase nickel-iron cofactor","type":"exact"},{"name":"hybrid nickel-triiron cluster","type":"exact"},{"name":"mu-1:2kappaO-oxido-mu-1:3kappaO-oxido-mu-2:4kappaO-oxido-mu-3:4kappaS-sulfido-mu3-2:3:4kappaS-sulfido-S-cysteinyl-N1'-histidino-O5-glutamato 1-iron-S5-cysteine persulfido-O3-serinyl 2-nickel-3,4-bis-(S-cysteinyl iron)","type":"exact"},{"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","type":"exact"}],"termid":"MOD:00298"}


id: PBO:0075151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 7","termid":"PBO:0075151"}


id: PBO:0076298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope protein 2","termid":"PBO:0076298"}


id: FYPO:0003958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal diacylglycerol O-acyltransferase activity","synonyms":[{"name":"abnormal DGAT activity","type":"exact"},{"name":"abnormal diacylglycerol acyltransferase activity","type":"broad"}],"termid":"FYPO:0003958"}


id: GO:0102496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A5 + O2 + 2-oxoglutarate = gibberellin A6 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete GA5 2,3 epoxidase activity (obsolete GO:0102496)","termid":"GO:0102496"}


id: FYPO:0001135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the 35S rRNA primary transcript measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rRNA precursor level","termid":"FYPO:0003600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased 35S rRNA precursor level","synonyms":[{"name":"increased 35S rRNA precursor accumulation","type":"related"},{"name":"increased 35S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased 35S rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased 35S rRNA precursor transcript level","type":"exact"},{"name":"increased 35S rRNA primary transcript level","type":"exact"}],"termid":"FYPO:0001135"}


id: GO:0008772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-seryl-[isocitrate dehydrogenase] = ADP + H+ + O-phospho-L-seryl-[isocitrate dehydrogenase].","definition_xrefs":["RHEA:43540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine kinase activity","termid":"GO:0106310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0003674","GO:0003824","GO:0140096","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"[isocitrate dehydrogenase (NADP+)] kinase activity","secondary_identifiers":["MetaCyc:PHOSICITDEHASE-RXN","EC:2.7.11.5"],"synonyms":[{"name":"ATP:isocitrate dehydrogenase (NADP+) phosphotransferase activity","type":"related"},{"name":"ICDH kinase/phosphatase activity","type":"broad"},{"name":"IDH kinase activity","type":"related"},{"name":"IDH kinase/phosphatase activity","type":"broad"},{"name":"IDH-K/P","type":"related"},{"name":"IDHK/P","type":"broad"},{"name":"isocitrate dehydrogenase (NADP) kinase activity","type":"related"},{"name":"isocitrate dehydrogenase (NADP+) kinase activity","type":"related"},{"name":"isocitrate dehydrogenase kinase (phosphorylating) activity","type":"related"},{"name":"isocitrate dehydrogenase kinase activity","type":"related"},{"name":"isocitrate dehydrogenase kinase/phosphatase activity","type":"broad"}],"termid":"GO:0008772"}


id: PBO:0025472
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microcephaly-capillary malformation syndrome (MICCAP)","termid":"PBO:0025472"}


id: MONDO:0957991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 53","secondary_identifiers":["OMIM:620642","MEDGEN:1851509","UMLS:C5882728"],"termid":"MONDO:0957991","xrefs":{"Monarch":{"xref_id":"0957991"}}}


id: GO:1900383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic plasticity, the ability of synapses to change as circumstances require, via receptor localization to the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. Processes may include receptor transport to, and/or maintenance at, the synapse.","definition_xrefs":["GOC:TermGenie","PMID:22464329","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic plasticity by receptor localization to synapse","synonyms":[{"name":"regulation of synaptic plasticity by receptor localisation to synapse","type":"exact"}],"termid":"GO:1900383"}


id: SO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genetic feature that encodes a trait used for artificial selection of a subpopulation.","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selection_marker","synonyms":[{"name":"selectable marker","type":"exact"},{"name":"selectable_marker","type":"exact"},{"name":"selection marker","type":"exact"}],"termid":"SO:0002232"}


id: PBO:0076851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed metallothionein like protein","termid":"PBO:0076851"}


id: PBO:0045185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB5 divergent transcript","termid":"PBO:0045185"}


id: PBO:0113000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-factor mating pheromone made by alpha cells; interacts with mating type a cells to induce cell cycle arrest and other responses leading to mating; also encoded by MF(ALPHA)2, although MF(ALPHA)1 produces most alpha-factor; binds copper(II) ions","termid":"PBO:0113000"}


id: PBO:0046696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS proto-oncogene 1, transcription factor","termid":"PBO:0046696"}


id: PBO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to be associated with the nuclear pore complex; null mutant is viable, displays elevated frequency of mitochondrial genome loss and is sensitive to freeze-thaw stress","termid":"PBO:0086096"}


id: GO:0140495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell migration-dependent mechanism for releasing cellular contents.","definition_xrefs":["PMID:25342562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"migracytosis","termid":"GO:0140495"}


id: MONDO:0015697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunoglobulin heavy chain deficiency","secondary_identifiers":["GARD:20111","SCTID:234539005","UMLS:C0398692","MEDGEN:98309","ICD9:279.03","Orphanet:169110","icd11.foundation:960006636"],"termid":"MONDO:0015697","xrefs":{"Monarch":{"xref_id":"0015697"}}}


id: GO:0015651
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"}]},"cv_name":"molecular_function","definition":"Enables the transfer of quaternary ammonium groups from one side of a membrane to the other. Quaternary ammonium groups are any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"quaternary ammonium group transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015202"],"synonyms":[{"name":"quaternary amine transmembrane transporter activity","type":"exact"},{"name":"quaternary ammonium compound transporter activity","type":"exact"}],"termid":"GO:0015651","terms_by_termid":{"GO:0090422":null}}


id: PBO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 8","termid":"PBO:0071350"}


id: PBO:0072376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 2","termid":"PBO:0072376"}


id: MONDO:0013439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital bile acid synthesis defect type 3 (BAS defect type 3) is a severe anomaly of bile acid synthesis characterized by severe neonatal cholestatic liver disease.","definition_xrefs":["Orphanet:79302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bile acid synthesis defect","termid":"MONDO:0018841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"congenital bile acid synthesis defect 3","secondary_identifiers":["DOID:0111070","UMLS:C3151147","SCTID:719454003","MEDGEN:462497","GARD:16713","MESH:C566340","OMIM:613812"],"synonyms":[{"name":"BASD3","type":"exact"},{"name":"CBAS3","type":"exact"},{"name":"CYP7B1 congenital bile acid synthesis defect","type":"exact"},{"name":"bile acid synthesis defect, congenital, 3","type":"related"},{"name":"bile acid synthesis defect, congenital, type 3","type":"exact"},{"name":"congenital bile acid synthesis defect caused by mutation in CYP7B1","type":"exact"},{"name":"congenital bile acid synthesis defect type 3","type":"exact"},{"name":"oxysterol 7-alpha-hydroxylase deficiency","type":"exact"}],"termid":"MONDO:0013439","xrefs":{"Monarch":{"xref_id":"0013439"}}}


id: FYPO:0003057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of an RNA in a cell is abnormal. An RNA may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"RNA localization phenotype","termid":"FYPO:0004853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA localization","synonyms":[{"name":"abnormal RNA localisation","type":"exact"},{"name":"abnormal cellular RNA localisation","type":"exact"},{"name":"abnormal cellular RNA localization","type":"exact"}],"termid":"FYPO:0003057"}


id: PBO:0087404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Structural component of the meiotic outer plaque; outer plaque is a membrane-organizing center that assembles on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane","termid":"PBO:0087404"}


id: GO:0072113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the head kidney over time, from its formation to the mature structure. The head kidney is a pronephros that consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis.","definition_xrefs":["GOC:mtg_kidney_jan10","ZFA:0000669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"},{"relation_name":"is_a","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"head kidney development","termid":"GO:0072113"}


id: FYPO:0004037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to mercury ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level during cellular response to mercury ion","synonyms":[{"name":"decreased protein accumulation during cellular response to mercury ion","type":"related"},{"name":"decreased protein level during cellular response to mercury","type":"exact"},{"name":"decreased protein level during cellular response to mercury ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to mercury ion during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to mercury ion","type":"exact"}],"termid":"FYPO:0004037"}


id: PBO:0060472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase pseudogene 2","termid":"PBO:0060472"}


id: PBO:0040494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AU RNA binding methylglutaconyl-CoA hydratase","termid":"PBO:0040494"}


id: PBO:0078532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 25","termid":"PBO:0078532"}


id: GO:0042638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shedding phase of the hair cycle.","definition_xrefs":["PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle phase","termid":"GO:0044851"},{"relation_name":"part_of","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exogen","synonyms":[{"name":"hair shedding","type":"narrow"}],"termid":"GO:0042638"}


id: MONDO:0043544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection acquired in a hospital or other healthcare setting.","definition_xrefs":["NCIT:C115164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"iatrogenic disease","termid":"MONDO:0043543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nosocomial infection","secondary_identifiers":["MEDGEN:61441","MESH:D003428","UMLS:C0205721","SCTID:19168005"],"synonyms":[{"name":"Cross infections","type":"related"},{"name":"HAI","type":"broad"},{"name":"Healthcare associated infection","type":"related"},{"name":"Healthcare associated infections","type":"related"},{"name":"Healthcare-associated infection","type":"exact"},{"name":"associated infection, Healthcare","type":"related"},{"name":"associated infections, Healthcare","type":"related"},{"name":"health care associated infection","type":"related"},{"name":"health care associated infections","type":"related"},{"name":"hospital infection","type":"related"},{"name":"hospital infections","type":"related"},{"name":"hospital-acquired infection","type":"exact"},{"name":"hospital-onset infection","type":"exact"},{"name":"infection, Cross","type":"related"},{"name":"infection, Healthcare associated","type":"related"},{"name":"infection, hospital","type":"related"},{"name":"infection, nosocomial","type":"related"},{"name":"infections, Cross","type":"related"},{"name":"infections, Healthcare associated","type":"related"},{"name":"infections, hospital","type":"related"},{"name":"infections, nosocomial","type":"related"},{"name":"nosocomial infection","type":"exact"},{"name":"nosocomial infections","type":"related"},{"name":"nosocomial infectious disease","type":"exact"}],"termid":"MONDO:0043544","xrefs":{"Monarch":{"xref_id":"0043544"}}}


id: MOD:00895
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[79762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a flavin adenine dinucleotide (FAD) group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin modified residue","termid":"MOD:00697"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"is_obsolete":false,"name":"FAD modified residue","references_by_uniquename":{"PMID:36408920":null},"termid":"MOD:00895","terms_by_termid":{"MOD:00226":null}}


id: PBO:0114850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase senataxin-like Dbl8","termid":"PBO:0114850"}


id: PBO:0031646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_respiration","termid":"PBO:0031646"}


id: PBO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17","termid":"PBO:0070891"}


id: MONDO:0019434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic-onset juvenile idiopathic arthritis is marked by the severity of the extra-articular manifestations (fever, cutaneous eruptions) and by an equal sex ratio.","definition_xrefs":["Orphanet:85414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic-onset juvenile idiopathic arthritis","secondary_identifiers":["NANDO:1200470","GARD:10966","MEDGEN:346934","NCIT:C119031","EFO:1001999","SCTID:201796004","icd11.foundation:504387587","UMLS:C1858558","NANDO:2201055","MESH:C565798"],"synonyms":[{"name":"SoJIA","type":"exact"},{"name":"Still disease","type":"exact"},{"name":"Still's disease (formerly)","type":"related"},{"name":"sJIA","type":"exact"},{"name":"systemic juvenile idiopathic arthritis","type":"related"},{"name":"systemic onset juvenile idiopathic arthritis","type":"related"},{"name":"systemic onset juvenile rheumatoid arthritis","type":"related"},{"name":"systemic polyarthritis","type":"exact"},{"name":"systemic-onset JIA","type":"exact"}],"termid":"MONDO:0019434","xrefs":{"Monarch":{"xref_id":"0019434"}}}


id: MONDO:0008986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circumvallate placenta syndrome","secondary_identifiers":["MEDGEN:347062","OMIM:215550","UMLS:C1859089","MESH:C565847"],"synonyms":[{"name":"circumvallate placenta syndrome","type":"exact"}],"termid":"MONDO:0008986","xrefs":{"Monarch":{"xref_id":"0008986"}}}


id: MONDO:0013991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital leptin deficiency is a form of monogenic obesity characterized by severe early-onset obesity and marked hyperphagia.","definition_xrefs":["Orphanet:66628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity due to congenital leptin deficiency","secondary_identifiers":["MEDGEN:767138","UMLS:C3554224","NORD:110641","DOID:0111334","GARD:13015","OMIM:614962","icd11.foundation:591009309"],"synonyms":[{"name":"Congenital Leptin Deficiency","type":"exact"},{"name":"LEPD","type":"related"},{"name":"leptin deficiency or dysfunction","type":"related"},{"name":"obesity, morbid, due to leptin deficiency","type":"exact"},{"name":"obesity, morbid, nonsyndromic 1","type":"related"}],"termid":"MONDO:0013991","xrefs":{"Monarch":{"xref_id":"0013991"}}}


id: MONDO:0010677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Mabry type","secondary_identifiers":["MESH:C564096","MEDGEN:326551","OMIM:310000","UMLS:C1839670"],"synonyms":[{"name":"muscular dystrophy, Mabry type","type":"exact"}],"termid":"MONDO:0010677","xrefs":{"Monarch":{"xref_id":"0010677"}}}


id: PBO:0086620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and colocalizes in a punctate pattern with the early golgi/COPI vesicles; YOL107W is not an essential protein","termid":"PBO:0086620"}


id: PBO:0057457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 576","termid":"PBO:0057457"}


id: GO:2000307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor (ligand) superfamily member 11 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:0072535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"regulation of RANKL production","type":"exact"},{"name":"regulation of TNFSF11 production","type":"exact"}],"termid":"GO:2000307"}


id: PBO:0054662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2068","termid":"PBO:0054662"}


id: PBO:0087198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-SNARE protein; assembles into SNARE complex with Bet1p, Bos1p and Sed5p; cycles between the ER and Golgi complex; involved in anterograde and retrograde transport between the ER and Golgi; synaptobrevin homolog","termid":"PBO:0087198"}


id: GO:1902444
data:
  {"annotated_genes":["SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109525],"is_not":false,"summary":null,"term":"GO:1902444"}]},"cv_name":"molecular_function","definition":"Binding to riboflavin.","definition_xrefs":["PMID:12083520","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"riboflavin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902444","terms_by_termid":{"GO:1902444":null}}


id: MONDO:0019360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickettsialpox","secondary_identifiers":["Orphanet:83312","MedDRA:10039137","DOID:11103","SCTID:75096007","UMLS:C0035597","icd11.foundation:1005140361","ICD9:083.2","MESH:D012288","GARD:19030","MEDGEN:19803"],"synonyms":[{"name":"Rickettsia akari spotted fever","type":"exact"},{"name":"vesicular rickettsiosis","type":"exact"}],"termid":"MONDO:0019360","xrefs":{"Monarch":{"xref_id":"0019360"}}}


id: PBO:0088895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin calcium-activated chloride channel OR Ca(2+)-activated phospholipid scramblase involved in ER-plasma membrane tethering Ist2","termid":"PBO:0088895"}


id: GO:0031037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament disassembly","termid":"GO:0031035"},{"relation_name":"is_a","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"myosin II filament disassembly","synonyms":[{"name":"myosin II depolymerization","type":"related"}],"termid":"GO:0031037"}


id: MONDO:0013230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hot water reflex epilepsy","termid":"MONDO:0013229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, hot water, 2","secondary_identifiers":["GARD:18287","MEDGEN:461886","DOID:0081107","UMLS:C3150536","OMIM:613340"],"synonyms":[{"name":"HWE2","type":"related"},{"name":"epilepsy, hot water, 2","type":"exact"}],"termid":"MONDO:0013230","xrefs":{"Monarch":{"xref_id":"0013230"}}}


id: GO:1903076
data:
  {"annotated_genes":["SJAG_03970","SJAG_04597","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[93608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[95051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:11602640","GOC:BHF","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090003","GO:1905963"],"synonyms":[{"name":"regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"regulation of establishment of protein localization in plasma membrane","type":"related"},{"name":"regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"regulation of protein localisation in plasma membrane","type":"related"},{"name":"regulation of protein localization in plasma membrane","type":"exact"},{"name":"regulation of protein targeting to plasma membrane","type":"related"},{"name":"regulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903076","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: GO:1901311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901311)","synonyms":[{"name":"regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"regulation of extracellular matrix protein production","type":"related"}],"termid":"GO:1901311"}


id: PBO:0031178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut","termid":"PBO:0031178"}


id: PBO:0085146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar serine-rich protein; role in preribosome assembly or transport; may function as a chaperone of small nucleolar ribonucleoprotein particles (snoRNPs); immunologically and structurally to rat Nopp140","termid":"PBO:0085146"}


id: PBO:0062570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AK member 1 pseudogene","termid":"PBO:0062570"}


id: PR:O14017
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A4.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.14c","synonyms":[{"name":"Spom972h-SPAC29A4.14c","type":"exact"}],"termid":"PR:O14017"}


id: MONDO:0021108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by acute inflammation of the meninges of the brain and/or spinal cord.","definition_xrefs":["NCIT:C26828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningitis","secondary_identifiers":["UMLS:C0025289","MEDGEN:6298","MESH:D008581","SCTID:7180009","ICD9:322.9"],"synonyms":[{"name":"inflammation of meninx","type":"exact"},{"name":"meningitis","type":"exact"},{"name":"meningitis (disease)","type":"exact"},{"name":"meninx inflammation","type":"exact"}],"termid":"MONDO:0021108","xrefs":{"Monarch":{"xref_id":"0021108"}}}


id: PBO:0063716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 4","termid":"PBO:0063716"}


id: PBO:0064786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1F antisense RNA 1","termid":"PBO:0064786"}


id: PBO:0047573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor binding protein 1","termid":"PBO:0047573"}


id: PBO:0071716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 14","termid":"PBO:0071716"}


id: PBO:0070604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 72","termid":"PBO:0070604"}


id: GO:0015969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanosine tetraphosphate metabolic process","secondary_identifiers":["MetaCyc:PPGPPMET-PWY"],"synonyms":[{"name":"guanosine tetraphosphate (5'-ppGpp-3') metabolic process","type":"exact"},{"name":"guanosine tetraphosphate (5'-ppGpp-3') metabolism","type":"exact"},{"name":"guanosine tetraphosphate metabolism","type":"exact"}],"termid":"GO:0015969"}


id: PBO:0082285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aquaglyceroporin, plasma membrane channel; involved in efflux of glycerol and xylitol, and in transport of acetate, arsenite, and antimonite; key factor in maintaining redox balance by mediating passive diffusion of glycerol; phosphorylated by Hog1p and Slt2p MAPK; deletion improves xylose fermentation; regulated by Rgc1p and Ask10p, which are regulated by Hog1p phosphorylation under osmotic stress; phosphorylation by Ypk1p required to maintain an open state","termid":"PBO:0082285"}


id: FYPO:0005431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination at one or more recombination hotspots is decreased to the background level. The basal rate of recombination (i.e. away from hotspots) may remain normal or may be decreased.","definition_xrefs":["PomBase:mah","PMID:12019258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic recombination at hotspot","synonyms":[{"name":"decreased mitotic recombination at hotspot during mitotic cell cycle","type":"related"},{"name":"decreased mitotic recombination at hotspot during vegetative growth","type":"exact"},{"name":"decreased mitotic recombination at recombination hotspot","type":"exact"},{"name":"hotspot-specific decreased mitotic recombination","type":"exact"},{"name":"reduced mitotic recombination at hotspot","type":"exact"}],"termid":"FYPO:0005431"}


id: PBO:0038315
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previous_curator_name","termid":"PBO:0038315"}


id: MONDO:0700170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasm that occurs in a horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equine neoplasm","termid":"MONDO:0700170","xrefs":{"Monarch":{"xref_id":"0700170"}}}


id: PBO:0068920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 163, pseudogene","termid":"PBO:0068920"}


id: PBO:0007024
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds AP-1 site 5'-TGACTCA-3'","termid":"PBO:0007024"}


id: MONDO:0010250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 49","secondary_identifiers":["MEDGEN:923000","DOID:0112060","Orphanet:485350","GARD:17880","OMIM:300114","UMLS:C0796221"],"synonyms":[{"name":"CLCN4-related X-linked intellectual disability syndrome","type":"exact"},{"name":"MRX49","type":"exact"},{"name":"Raynaud-Claes syndrome, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 15","type":"exact"},{"name":"intellectual disability, X-linked 49","type":"exact"},{"name":"mental retardation, X-linked 15","type":"exact"},{"name":"mental retardation, X-linked 49","type":"related"}],"termid":"MONDO:0010250","xrefs":{"Monarch":{"xref_id":"0010250"}}}


id: PBO:0073496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 2","termid":"PBO:0073496"}


id: PBO:0027860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_DNA_damage","termid":"PBO:0027860"}


id: PBO:0027220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_sister_chromatid_separation","termid":"PBO:0027220"}


id: PBO:0064192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 activating protein","termid":"PBO:0064192"}


id: GO:0046459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a short-chain fatty acid. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"short-chain fatty acid metabolic process","synonyms":[{"name":"short-chain fatty acid metabolism","type":"exact"}],"termid":"GO:0046459"}


id: PBO:0005439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor A subunit Ssb3","termid":"PBO:0005439"}


id: MONDO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A malignant neoplasm involving the connective tissue","gene_count":0,"genotype_count":0,"name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","secondary_identifiers":["MESH:D009372","DOID:201","SCTID:126598008"],"synonyms":[{"name":"cancer of connective tissue","type":"exact"},{"name":"connective tissue cancer","type":"exact"},{"name":"connective tissue neoplasm","type":"broad"},{"name":"malignant connective tissue neoplasm","type":"exact"},{"name":"malignant neoplasm of connective tissue","type":"exact"},{"name":"neoplasm of connective tissues","type":"broad"}],"termid":"MONDO:0002176","xrefs":{"Monarch":{"xref_id":"0002176"}}}


id: GO:0072040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in morphogenesis","termid":"GO:1902338"},{"relation_name":"is_a","term_name":"negative regulation of somatic stem cell population maintenance","termid":"GO:1904673"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process","termid":"GO:2001054"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","synonyms":[{"name":"negative regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis","type":"narrow"},{"name":"negative regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis","type":"exact"}],"termid":"GO:0072040"}


id: PBO:0029197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_during_mitotic_M_phase","termid":"PBO:0029197"}


id: PBO:0082826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved phosphatase acting as a metabolite repair enzyme; shows specific dephosphorylating activity on two side-products of central carbohydrate metabolism, 2-phosphoglycolate and 4-phosphoerythronate; alkaline phosphatase specific for p-nitrophenyl phosphate; also has protein phosphatase activity; human ortholog PGP shows similar substrate specificity, deletion causes similar metabolite accumulation phenotypes, suggesting conserved role in eliminating glycolytic byproducts","termid":"PBO:0082826"}


id: PBO:0057780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2682","termid":"PBO:0057780"}


id: PBO:0012279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase","termid":"PBO:0012279"}


id: MONDO:0012236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 4","secondary_identifiers":["MESH:C563752","UMLS:C1836473","MEDGEN:332217","OMIM:609271"],"synonyms":[{"name":"KTCN4","type":"exact"},{"name":"keratoconus 4","type":"exact"}],"termid":"MONDO:0012236","xrefs":{"Monarch":{"xref_id":"0012236"}}}


id: GO:0032485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Ral protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Ral protein signal transduction","termid":"GO:0032484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Ral protein signal transduction","termid":"GO:0032485"}


id: GO:0048900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cluster of a relatively undifferentiated cell along the developing anterior lateral line, originating from cranial ectodermal placodes situated between the eye and the ear. The neuromast primordium deposits proneuromasts along the lateral line, from which the neuromasts will develop.","definition_xrefs":["GOC:dgh","PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast primordium migration","termid":"GO:0048883"},{"relation_name":"part_of","term_name":"anterior lateral line development","termid":"GO:0048899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast primordium migration","synonyms":[{"name":"ALL neuromast primordium migration","type":"exact"}],"termid":"GO:0048900"}


id: MONDO:0020386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"double outlet right ventricle","termid":"MONDO:0018089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"double outlet right ventricle with subaortic or doubly committed ventricular septal defect with pulmonary stenosis","secondary_identifiers":["Orphanet:99043","GARD:19615","ICD10CM:Q21.3","SCTID:253298003"],"synonyms":[{"name":"DORV with subaortic or doubly committed VSD with pulmonary stenosis","type":"exact"},{"name":"DORV, Fallot type","type":"exact"},{"name":"double outlet right ventricle, Fallot type","type":"exact"}],"termid":"MONDO:0020386","xrefs":{"Monarch":{"xref_id":"0020386"}}}


id: MONDO:0015278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial pancreatic carcinoma is defined by the presence of pancreatic cancer (PC) in two or more first-degree relatives.","definition_xrefs":["Orphanet:1333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"familial pancreatic carcinoma","secondary_identifiers":["OMIM:260350","SCTID:715414009","MESH:C535837","MEDGEN:419700","UMLS:C2931038","icd11.foundation:1385362916","NCIT:C43298","GARD:4206"],"synonyms":[{"name":"familial pancreatic cancer","type":"exact"},{"name":"familial pancreatic carcinoma","type":"exact"},{"name":"hereditary exocrine pancreatic carcinoma","type":"exact"},{"name":"hereditary pancreatic cancer","type":"exact"},{"name":"hereditary pancreatic carcinoma","type":"exact"},{"name":"pancreatic acinar carcinoma","type":"related"},{"name":"pancreatic cancer, somatic","type":"exact"},{"name":"pancreatic carcinoma, somatic","type":"exact"}],"termid":"MONDO:0015278","xrefs":{"Monarch":{"xref_id":"0015278"}}}


id: GO:0034297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which oidia, a type of asexual spore found in fungi, are formed. Oidia are borne a few at a time on very simple hyphae that protrude a short distance into the substrate, and are usually presumed not to constitute the main reproductive strategy of the fungus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oidium formation","termid":"GO:0034297"}


id: GO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A generic term for parts of cells prepared by disruptive biochemical techniques.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell fraction (obsolete GO:0000267)","synonyms":[{"name":"cell fraction","type":"exact"}],"termid":"GO:0000267"}


id: GO:0015351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of bilirubin from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete bilirubin secondary active transmembrane transporter activity (obsolete GO:0015351)","synonyms":[{"name":"bilirubin porter activity","type":"related"},{"name":"bilitranslocase","type":"narrow"}],"termid":"GO:0015351"}


id: PBO:0071518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 21","termid":"PBO:0071518"}


id: PBO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1748 family protein","termid":"PBO:0002015"}


id: PBO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-W","termid":"PBO:0002626"}


id: PR:O74874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ccr4 gene.","definition_xrefs":["UniProtKB:O74874","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-repressible alcohol dehydrogenase transcriptional effector (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.08c","synonyms":[{"name":"Spom972h-ccr4","type":"exact"},{"name":"carbon catabolite repressor protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytoplasmic deadenylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74874"}


id: MONDO:0021296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the renal pelvis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney carcinoma in situ","termid":"MONDO:0004732"},{"relation_name":"is_a","term_name":"renal pelvis carcinoma","termid":"MONDO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of renal pelvis","secondary_identifiers":["MEDGEN:83855","UMLS:C0347184","SCTID:92697000","NCIT:C4597","ICD9:233.9"],"synonyms":[{"name":"carcinoma in situ of kidney pelvis","type":"exact"},{"name":"carcinoma in situ of renal pelvis","type":"exact"},{"name":"carcinoma in situ of the kidney pelvis","type":"exact"},{"name":"carcinoma in situ of the renal pelvis","type":"exact"},{"name":"kidney pelvis carcinoma in situ","type":"exact"},{"name":"renal pelvis carcinoma in situ","type":"exact"},{"name":"renal pelvis in situ carcinoma","type":"exact"},{"name":"stage 0 renal pelvis carcinoma","type":"exact"},{"name":"stage 0is carcinoma of kidney pelvis","type":"exact"},{"name":"stage 0is carcinoma of renal pelvis","type":"exact"},{"name":"stage 0is carcinoma of the kidney pelvis","type":"exact"},{"name":"stage 0is carcinoma of the renal pelvis","type":"exact"},{"name":"stage 0is kidney pelvis carcinoma","type":"exact"},{"name":"stage 0is kidney renal pelvis urothelial cancer","type":"exact"},{"name":"stage 0is renal pelvis cancer","type":"exact"},{"name":"stage 0is renal pelvis cancer aJCC v7","type":"exact"},{"name":"stage 0is renal pelvis urothelial carcinoma","type":"exact"},{"name":"stage 0is renal pelvis urothelial carcinoma aJCC v7","type":"exact"}],"termid":"MONDO:0021296","xrefs":{"Monarch":{"xref_id":"0021296"}}}


id: GO:0080014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a thalianol = a thalian-diol. This reaction is the addition of a hydroxyl group to thalianol ((13R,14R,17E)-podioda-8,17,21-trien-3beta-ol) to create a thalian-diol ((13R,14R,17E)-podioda-8,17,21-trien-3beta,X-diol), where the hydroxyl group may be attached at one of several different available carbons in ring B or C of thalianol, indicated by the X.","definition_xrefs":["PMID:18356490","MetaCyc:RXN-9631","PMID:17474751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thalianol hydroxylase activity","termid":"GO:0080014"}


id: GO:1990127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of osmotic stress, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:krc","GOC:mtg_apoptosis","PMID:16571598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:0008627"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1990127"}


id: FYPO:0003393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which electron transport involved in cellular respiration is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal respiratory electron transport","synonyms":[{"name":"abnormal respiratory electron transport chain","type":"exact"},{"name":"abnormal respiratory electron transport during mitotic cell cycle","type":"related"},{"name":"abnormal respiratory electron transport process during vegetative growth","type":"exact"}],"termid":"FYPO:0003393"}


id: GO:0030734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 1,4-N1-D-glucooligosaccharide = S-adenosyl-L-homocysteine + oligosaccharide containing 6-methyl-D-glucose units.","definition_xrefs":["EC:2.1.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"polysaccharide O-methyltransferase activity","secondary_identifiers":["MetaCyc:POLYSACCHARIDE-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:1,4-alpha-D-glucan 6-O-methyltransferase activity","type":"related"},{"name":"acylpolysacharide 6-methyltransferase activity","type":"related"},{"name":"polysaccharide methyltransferase activity","type":"related"}],"termid":"GO:0030734"}


id: PBO:0045148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 6","termid":"PBO:0045148"}


id: PBO:0045009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 3","termid":"PBO:0045009"}


id: MONDO:0044972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the eosinophil.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"eosinophil disorder","secondary_identifiers":["MEDGEN:739396","SCTID:417967008","UMLS:C1691020"],"synonyms":[{"name":"disease of eosinophil","type":"exact"},{"name":"disease or disorder of eosinophil","type":"exact"},{"name":"disorder of eosinophil","type":"exact"},{"name":"eosinophil disease or disorder","type":"exact"}],"termid":"MONDO:0044972","xrefs":{"Monarch":{"xref_id":"0044972"}}}


id: FYPO:0004651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal secondary cell septum biogenesis","termid":"FYPO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased secondary cell septum thickness","synonyms":[{"name":"decreased secondary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased secondary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased secondary septum thickness","type":"exact"},{"name":"reduced secondary cell septum thickness","type":"exact"},{"name":"thin secondary septum","type":"exact"}],"termid":"FYPO:0004651"}


id: PBO:0005759
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bucentaur or craniofacial development","termid":"PBO:0005759"}


id: GO:0070764
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is formed by the association of the Notch ligand Delta1 with the gamma-secretase complex.","definition_xrefs":["PMID:12794186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"gamma-secretase-Delta1 complex","termid":"GO:0070764"}


id: PBO:0091225
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SODium","termid":"PBO:0091225"}


id: MONDO:0009188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy telangiectasia syndrome is characterized by intellectual deficit, epilepsy, palpebral conjunctival telangiectasias and diminished serum IgA, particular facies and a shortened fifth finger. It has been reported in six siblings from a Mexican family. It is probably transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1951"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy-telangiectasia syndrome","secondary_identifiers":["MEDGEN:384017","OMIM:226850","MESH:C535497","UMLS:C1856929","GARD:2168"],"synonyms":[{"name":"epilepsy telangiectasia","type":"related"},{"name":"epilepsy-telangiectasia","type":"related"},{"name":"intellectual disability, epilepsy, palpebral conjunctival telangiectasias and IgA deficiency","type":"related"},{"name":"mental retardation, epilepsy, palpebral conjunctival telangiectasias and IgA deficiency","type":"related"}],"termid":"MONDO:0009188","xrefs":{"Monarch":{"xref_id":"0009188"}}}


id: GO:0009832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellulose and pectin-containing cell wall. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:lr","GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"is_a","term_name":"plant-type cell wall organization or biogenesis","termid":"GO:0071669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"plant-type cell wall biogenesis","synonyms":[{"name":"cell wall anabolism","type":"broad"},{"name":"cell wall assembly","type":"broad"},{"name":"cell wall biosynthetic process","type":"broad"},{"name":"cell wall formation","type":"broad"},{"name":"cell wall synthesis","type":"broad"},{"name":"cellulose and pectin-containing cell wall biogenesis","type":"exact"}],"termid":"GO:0009832"}


id: MONDO:1011644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch, non-human animal","secondary_identifiers":["OMIA:000794"],"termid":"MONDO:1011644","xrefs":{"Monarch":{"xref_id":"1011644"}}}


id: PBO:0060999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing 4","termid":"PBO:0060999"}


id: CHEBI:27365
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion","termid":"CHEBI:27365"}


id: PBO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 9","termid":"PBO:0071980"}


id: PBO:0070466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 1","termid":"PBO:0070466"}


id: MONDO:0004412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare, aggressive carcinoma of the sweat glands arising from malignant transformation of a long standing spiradenoma. It usually grows in the upper extremities, lower extremities, trunk, and head and neck. It has the tendency to recur and metastasize most often to the lymph nodes, bones, and lungs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine carcinoma","termid":"MONDO:0024240"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"malignant spiradenoma","secondary_identifiers":["SCTID:403942003","MEDGEN:266097","UMLS:C1266063","DOID:7960","ICDO:8403/3","NCIT:C5117"],"synonyms":[{"name":"Spiradenocarcinoma","type":"exact"},{"name":"malignant eccrine spiradenoma","type":"exact"},{"name":"malignant eccrine spiradenoma (morphologic abnormality)","type":"exact"},{"name":"malignant spiradenoma","type":"exact"},{"name":"spiradenoma, malignant","type":"exact"}],"termid":"MONDO:0004412","xrefs":{"Monarch":{"xref_id":"0004412"}}}


id: PBO:0074273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 14","termid":"PBO:0074273"}


id: MONDO:0006825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prion disease found exclusively among the Fore linguistic group natives of the highlands of new guinea. The illness is primarily restricted to adult females and children of both sexes. It is marked by the subacute onset of tremor and ataxia followed by motor weakness and incontinence. Death occurs within 3-6 months of disease onset. The condition is associated with ritual cannibalism, and has become rare since this practice has been discontinued. Pathologic features include a noninflammatory loss of neurons that is most prominent in the cerebellum, glial proliferation, and amyloid plaques. (From Adams et al., Principles of Neurology, 6th ed, p773)","definition_xrefs":["MESH:D007729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"human prion disease","termid":"MONDO:0018926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"kuru","secondary_identifiers":["ICD9:046.0","SCTID:86188000","UMLS:C0022802","Orphanet:454745","GARD:7617","MedDRA:10023497","MEDGEN:9653","EFO:1001008","ICD10CM:A81.81","icd11.foundation:553889510","DOID:648"],"synonyms":[{"name":"kuru encephalopathy","type":"exact"}],"termid":"MONDO:0006825","xrefs":{"Monarch":{"xref_id":"0006825"}}}


id: PBO:0002676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb1 (predicted)","termid":"PBO:0002676"}


id: PBO:0060655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 4","termid":"PBO:0060655"}


id: GO:1904541
data:
  {"annotated_genes":["SJAG_03646","SJAG_01171","SJAG_01017","SJAG_03444","SJAG_05001","SJAG_00667","SJAG_01888","SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87490,88302,93220,99333,101130,101131,107224,110459],"is_not":false,"summary":null,"term":"GO:1904541"}]},"cv_name":"biological_process","definition":"Any fungal-type cell wall disassembly that is involved in conjugation with cellular fusion.","definition_xrefs":["PMID:25825517","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization involved in conjugation with cellular fusion","termid":"GO:0070871"},{"relation_name":"is_a","term_name":"fungal-type cell wall disassembly","termid":"GO:0071853"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02718":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000747","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall disassembly involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall disassembly involved in cell fusion","type":"related"},{"name":"fungal-type cell wall disassembly involved in mating","type":"related"}],"termid":"GO:1904541","terms_by_termid":{"GO:1904541":null}}


id: PBO:0081209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN8 pseudogene 1","termid":"PBO:0081209"}


id: GO:0140613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mn2+(in) = ADP + H+ + Mn2+(out) + phosphate.","definition_xrefs":["PMID:15590060","PMID:15831496","PMID:11134055","PMID:21187401","RHEA:66820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"P-type manganese transporter activity","secondary_identifiers":["MetaCyc:RXN-20940"],"termid":"GO:0140613"}


id: PR:Q09723
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A multifunctional methyltransferase subunit TRM112-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional methyltransferase subunit trm112 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.02","secondary_identifiers":["UniProtKB:Q09723"],"synonyms":[{"name":"SPAC31A2.02","type":"related"},{"name":"Spom972h-TRMT112","type":"exact"},{"name":"eRF1 MTase subunit trm112 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eRF1 methyltransferase subunit trm112 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA methyltransferase 112 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09723"}


id: GO:0050840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a component of the extracellular matrix.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix binding","synonyms":[{"name":"adhesive extracellular matrix constituent","type":"related"},{"name":"extracellular matrix constituent binding","type":"exact"}],"termid":"GO:0050840"}


id: GO:0005124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to scavenger receptors, a family of proteins that are expressed on myeloid cells and are involved in the uptake of effete cellular components and foreign particles.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"scavenger receptor binding","synonyms":[{"name":"scavenger receptor ligand","type":"narrow"}],"termid":"GO:0005124"}


id: GO:0102027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-demethylmenaquinol-8 + S-adenosyl-L-methionine = menaquinol-8 + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity (obsolete GO:0102027)","termid":"GO:0102027"}


id: PBO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase (RNR) inhibitor family","termid":"PBO:0001759"}


id: GO:0047755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-threo-isocitrate = D-erythro-isocitrate.","definition_xrefs":["EC:5.1.2.6","RHEA:10820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"isocitrate epimerase activity","secondary_identifiers":["KEGG_REACTION:R02318","MetaCyc:ISOCITRATE-EPIMERASE-RXN"],"synonyms":[{"name":"(1R,2S)-1-hydroxypropane-1,2,3-tricarboxylate 1-epimerase activity","type":"related"}],"termid":"GO:0047755"}


id: MONDO:0859192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"famililal cerebral cavernous malformations","termid":"MONDO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cerebral cavernous malformation 4","secondary_identifiers":["OMIM:619538","UMLS:C5561991","MEDGEN:1794201"],"synonyms":[{"name":"cerebral cavernous malformations 4","type":"exact"}],"termid":"MONDO:0859192","xrefs":{"Monarch":{"xref_id":"0859192"}}}


id: GO:1901480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oleate from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:19493158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transmembrane transporter activity","termid":"GO:0005324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"oleate transmembrane transporter activity","synonyms":[{"name":"oleate transporter activity","type":"related"}],"termid":"GO:1901480"}


id: GO:0032828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell differentiation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell differentiation","termid":"GO:0032825"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation involved in immune response","termid":"GO:0032826"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"natural killer cell differentiation involved in immune response","termid":"GO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell differentiation involved in immune response","synonyms":[{"name":"activation of natural killer cell differentiation during immune response","type":"narrow"},{"name":"positive regulation of NK cell differentiation during immune response","type":"related"},{"name":"positive regulation of natural killer cell development involved in immune response","type":"related"},{"name":"positive regulation of natural killer cell differentiation during immune response","type":"related"},{"name":"stimulation of natural killer cell differentiation during immune response","type":"narrow"},{"name":"up regulation of natural killer cell differentiation during immune response","type":"related"},{"name":"up-regulation of natural killer cell differentiation during immune response","type":"related"},{"name":"upregulation of natural killer cell differentiation during immune response","type":"related"}],"termid":"GO:0032828"}


id: GO:0061568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into GDP, guanosine diphosphate, to produce GTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP phosphorylation (obsolete GO:0061568)","termid":"GO:0061568"}


id: MONDO:0003386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder adenocarcinoma characterized by the presence of malignant glandular epithelial cells and clear cells distributed in a tubulo-cystic, papillary, or diffuse pattern. There is a female predilection. Clinical presentation includes hematuria and dysuria.","definition_xrefs":["NCIT:C6179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder adenocarcinoma","termid":"MONDO:0002751"},{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder clear cell adenocarcinoma","secondary_identifiers":["MEDGEN:272370","DOID:5306","UMLS:C1332557"],"synonyms":[{"name":"bladder clear cell adenocarcinoma","type":"exact"},{"name":"bladder mesonephric adenocarcinoma","type":"exact"},{"name":"clear cell adenocarcinoma of bladder","type":"related"},{"name":"clear cell adenocarcinoma of the bladder","type":"related"},{"name":"clear cell adenocarcinoma of the urinary bladder","type":"related"},{"name":"clear cell adenocarcinoma of urinary bladder","type":"related"},{"name":"urinary bladder clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0003386","xrefs":{"Monarch":{"xref_id":"0003386"}}}


id: MONDO:0005430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hypertension with early onset relative to normal range for a given population.","definition_xrefs":["EFO:0004772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early onset hypertension","termid":"MONDO:0005430","xrefs":{"Monarch":{"xref_id":"0005430"}}}


id: MONDO:0012766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 37 is a pure form of hereditary spastic paraplegia characterized by a childhood- to adulthood-onset of slowly progressive spastic gait, extensor plantar responses, brisk tendon reflexes in arms and legs, decreased vibration sense at ankles and urinary dysfunction. Ankle clonus is also reported in some patients.","definition_xrefs":["Orphanet:171612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 37","secondary_identifiers":["MESH:C567931","OMIM:611945","UMLS:C2936880","SCTID:763369007","DOID:0110788","GARD:17064","MEDGEN:422458"],"synonyms":[{"name":"SPG37","type":"exact"},{"name":"autosomal dominant spastic paraplegia 37","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 37","type":"exact"},{"name":"hereditary spastic paraplegia type 37","type":"exact"},{"name":"spastic paraplegia 37, autosomal dominant","type":"related"}],"termid":"MONDO:0012766","xrefs":{"Monarch":{"xref_id":"0012766"}}}


id: MONDO:0004929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constant exophthalmos","secondary_identifiers":["UMLS:C0155267","DOID:9945","icd11.foundation:2100094996","MEDGEN:509884","ICD9:376.31","SCTID:89907009"],"termid":"MONDO:0004929","xrefs":{"Monarch":{"xref_id":"0004929"}}}


id: MONDO:0003926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that involves the pleura.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nerve schwannoma","termid":"MONDO:0004820"},{"relation_name":"is_a","term_name":"pleural neoplasm","termid":"MONDO:0021065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurilemmoma of the pleura","secondary_identifiers":["MEDGEN:233863","NCIT:C5418","UMLS:C1335435","DOID:6564"],"synonyms":[{"name":"neurilemmoma of pleura","type":"exact"},{"name":"pleura schwannoma","type":"exact"},{"name":"pleural neurilemmoma","type":"exact"},{"name":"pleural schwannoma","type":"exact"},{"name":"schwannoma of pleura","type":"exact"},{"name":"schwannoma of the pleura","type":"exact"}],"termid":"MONDO:0003926","xrefs":{"Monarch":{"xref_id":"0003926"}}}


id: GO:0060261
data:
  {"annotated_genes":["SJAG_02494","SJAG_02391","SJAG_03061","SJAG_00150","SJAG_05341","SJAG_03622","SJAG_04099","SJAG_04705","SJAG_02849","SJAG_01771","SJAG_01952","SJAG_04820","SJAG_03590","SJAG_03421","SJAG_00342","SJAG_00904","SJAG_02551","SJAG_04647","SJAG_01403","SJAG_00297","SJAG_00909","SJAG_05203","SJAG_03573","SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86669,89574,89889,93538,93648,94577,95060,97874,98222,101141,102593,102854,104853,105203,105398,105531,107874,107901,108186,113865,114431,118056],"is_not":false,"summary":null,"term":"GO:0060261"},{"annotations":[88916,114320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription initiation","termid":"GO:2000144"},{"relation_name":"positively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060261","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: GO:0090714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by the innate immune system and directed against a previously encountered immunologic stimulus, being quicker and quantitatively better compared with the initial response to that stimulus.","definition_xrefs":["PMID:26086132","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"immunological memory process","termid":"GO:0090713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immunity memory response","termid":"GO:0090714"}


id: PBO:0027347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_menadione","termid":"PBO:0027347"}


id: GO:0110139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of imaginal disc-derived leg joint morphogenesis.","definition_xrefs":["PMID:25329825","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived leg joint morphogenesis","termid":"GO:0110137"},{"relation_name":"negatively_regulates","term_name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of imaginal disc-derived leg joint morphogenesis","termid":"GO:0110139"}


id: GO:0070948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a target cell, the directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"regulates","term_name":"neutrophil mediated cytotoxicity","termid":"GO:0070942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated cytotoxicity","synonyms":[{"name":"regulation of neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070948"}


id: PBO:0001008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation protein (predicted)","termid":"PBO:0001008"}


id: GO:0043781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cobalt-factor II = S-adenosyl-L-homocysteine + cobalt-factor III.","definition_xrefs":["EC:2.1.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"cobalt-factor II C20-methyltransferase activity","secondary_identifiers":["RHEA:17997","MetaCyc:RXN-8760"],"synonyms":[{"name":"CbiL","type":"narrow"},{"name":"S-adenosyl-L-methionine:cobalt-factor-II C20-methyltransferase activity","type":"related"},{"name":"cobalt-factor II C20 methyltransferase activity","type":"exact"},{"name":"cobalt-precorrin-2 C(20)-methyltransferase activity","type":"related"}],"termid":"GO:0043781"}


id: GO:0042755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue.","definition_xrefs":["GOC:pr","GOC:jl","PMID:19361967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eating behavior","synonyms":[{"name":"eating behaviour","type":"exact"}],"termid":"GO:0042755"}


id: GO:0046653
data:
  {"annotated_genes":["SJAG_01766","SJAG_02225","SJAG_00106","SJAG_02408","SJAG_01466","SJAG_03914","SJAG_04156","SJAG_01126","SJAG_03712","SJAG_03275","SJAG_01198","SJAG_01616","SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111548,107496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[89510,113192,104104,105242,112809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[95838,97607,93685,90507,107498,103764,111551,103957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrahydrofolate metabolism","type":"exact"}],"termid":"GO:0046653","terms_by_termid":{"GO:0009257":null,"GO:0035999":null,"GO:0046654":null}}


id: PBO:0108608
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_detail","termid":"PBO:0108608"}


id: MONDO:0015985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Bone dysplasia Azouz type is a form of generalized enchondromatosis with involvement of the spine (so called spondyloenchondromatosis). Spondyloenchondromatosis is a very rare skeletal dysplasia characterized by severe platyspondyly, and mild involvement of hands and feet.","definition_xrefs":["Orphanet:1844"],"gene_count":0,"genotype_count":0,"name":"obsolete bone dysplasia, Azouz type (obsolete MONDO:0015985)","secondary_identifiers":["icd11.foundation:2054115498","MEDGEN:929662","SCTID:720566004","GARD:920","UMLS:C4303993"],"synonyms":[{"name":"bone dysplasia Azouz type","type":"related"}],"termid":"MONDO:0015985","xrefs":{"Monarch":{"xref_id":"0015985"}}}


id: GO:0003731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with the 7-methylguanosine cap at the 5' end of a nascent messenger RNA transcript.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cap binding (obsolete GO:0003731)","synonyms":[{"name":"mRNA cap binding","type":"exact"}],"termid":"GO:0003731"}


id: MOD:00499
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:128#C","PubMed:3578767","PubMed:3311742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"5-iodoacetamidofluorescein","synonyms":[{"name":"5-Iodoacetamidofluorescein (Molecular Probe, Eugene, OR)","type":"related"},{"name":"Fluorescein","type":"related"}],"termid":"MOD:00499"}


id: PBO:0058979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular LMNA interacting protein","termid":"PBO:0058979"}


id: PBO:0079089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-2","termid":"PBO:0079089"}


id: PBO:0072716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide receptor 3","termid":"PBO:0072716"}


id: GO:1904746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in development.","definition_xrefs":["PMID:22801495","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in development","termid":"GO:1902742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in development","synonyms":[{"name":"down regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"down regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"down regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"down regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"down regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"down regulation of apoptotic process involved in development","type":"exact"},{"name":"down regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"down regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"down regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"down regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"down regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"down regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"down regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"down regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"down regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"down regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"down regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"down-regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"down-regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"down-regulation of apoptotic process involved in development","type":"exact"},{"name":"down-regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"down-regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"down-regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"down-regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"down-regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"down-regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"down-regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"downregulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"downregulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"downregulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"downregulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"downregulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"downregulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"downregulation of apoptotic process involved in development","type":"exact"},{"name":"downregulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"downregulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"downregulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"downregulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"downregulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"downregulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"downregulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"downregulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"downregulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"downregulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"downregulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"downregulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"downregulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"inhibition of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"inhibition of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"inhibition of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic cell death involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic cell death involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic process involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic process involved in development","type":"narrow"},{"name":"inhibition of apoptotic process involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"inhibition of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"inhibition of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"inhibition of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"inhibition of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"inhibition of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"inhibition of programmed cell death by apoptosis involved in anatomical structure development","type":"narrow"},{"name":"inhibition of programmed cell death by apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"inhibition of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"inhibition of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"inhibition of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"negative regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"negative regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"negative regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"negative regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"negative regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"negative regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"negative regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"negative regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"negative regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1904746"}


id: MOD:01005
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-butylsulfenyl","synonyms":[{"name":"StBu","type":"exact"}],"termid":"MOD:01005"}


id: PBO:0060552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma associated transcript 1","termid":"PBO:0060552"}


id: GO:0062192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-L-rhamnose = beta-L-rhamnose.","definition_xrefs":["RHEA:25584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"L-rhamnose mutarotase activity","secondary_identifiers":["EC:5.1.3.32"],"termid":"GO:0062192"}


id: GO:0043675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The third layer of the sexine.","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sexine","termid":"GO:0043673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sculpture element","termid":"GO:0043675"}


id: PBO:0082645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of RNA polymerase transcription factor TFIIH holoenzyme; acts as dsDNA-dependent translocase in context of TFIIH, unwinds DNA strands during initiation and promotes transcription start site (TSS) scanning; has DNA-dependent ATPase/helicase activity; interacts functionally with TFIIB, has roles in TSS selection and gene looping to juxtapose initiation and termination regions; involved in DNA repair; relocalizes to cytosol under hypoxia; homolog of human ERCC3","termid":"PBO:0082645"}


id: PBO:0043490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTFR antisense RNA 1","termid":"PBO:0043490"}


id: MONDO:0015650
data:
  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id: MONDO:1010927
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id: GO:0018394
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id: GO:0120085
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transposon integration that contributes to a process of RNA-mediated transposition.","definition_xrefs":["GOC:mah","PMID:26358720"],"gene_count":0,"genotype_count":0,"name":"obsolete transposon integration involved in RNA-mediated transposition (obsolete GO:0120085)","synonyms":[{"name":"retrotransposon integration","type":"exact"}],"termid":"GO:0120085"}


id: MONDO:0002684
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id: PBO:0030751
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcriptional_response_to_pheromone_at_normal_pheromone_level_(obsolete_FYPO:0000986)","termid":"PBO:0030751"}


id: PBO:0064825
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id: GO:0060856
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id: FYPO:0002308
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id: PBO:0034816
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id: PBO:0079632
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id: MONDO:0031199
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id: PBO:0080608
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id: MONDO:0012251
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id: MONDO:0011752
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id: PBO:0116251
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in protein folding, human TAPT1 ortholog","termid":"PBO:0116251"}


id: GO:0009139
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id: PATO:0005004
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id: PBO:0051191
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id: GO:1901995
data:
  {"annotated_genes":["SJAG_00145","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[94353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic cell cycle phase transition.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:22841721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle phase transition","termid":"GO:1901993"},{"relation_name":"positively_regulates","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of meiotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle transition","type":"broad"},{"name":"activation of meiotic cell cycle phase transition","type":"narrow"},{"name":"positive regulation of cell cycle transition","type":"broad"},{"name":"up regulation of cell cycle transition","type":"broad"},{"name":"up regulation of meiotic cell cycle phase transition","type":"exact"},{"name":"up-regulation of cell cycle transition","type":"broad"},{"name":"up-regulation of meiotic cell cycle phase transition","type":"exact"},{"name":"upregulation of cell cycle transition","type":"broad"},{"name":"upregulation of meiotic cell cycle phase transition","type":"exact"}],"termid":"GO:1901995","terms_by_termid":{"GO:0110032":null,"GO:1905191":null}}


id: PBO:0065184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and serine rich 2","termid":"PBO:0065184"}


id: PBO:0063214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCCA divergent transcript","termid":"PBO:0063214"}


id: MONDO:0018888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital cornea plana (obsolete MONDO:0018888)","termid":"MONDO:0018888","xrefs":{"Monarch":{"xref_id":"0018888"}}}


id: FYPO:0003262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA measured in a cell is greater than normal. All types of small RNA, a particular RNA type, or a specific small RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:24095277"],"gene_count":0,"genotype_count":0,"name":"obsolete increased small RNA level (obsolete FYPO:0003262)","synonyms":[{"name":"increased accumulation of small RNAs","type":"related"},{"name":"increased small RNA accumulation","type":"related"},{"name":"increased small RNA level","type":"related"},{"name":"increased small RNA level during mitotic cell cycle","type":"related"},{"name":"increased small RNA level during vegetative growth","type":"exact"},{"name":"reduced small RNA level","type":"exact"}],"termid":"FYPO:0003262"}


id: FYPO:0005762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homocitrate synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abolished homocitrate synthase activity","synonyms":[{"name":"homocitrate synthase activity abolished","type":"exact"}],"termid":"FYPO:0005762"}


id: PBO:0031880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0031880"}


id: PBO:0049901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 2","termid":"PBO:0049901"}


id: GO:0032959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inositol trisphosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate metabolic process","termid":"GO:0032957"},{"relation_name":"is_a","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol trisphosphate biosynthetic process","synonyms":[{"name":"IP3 biosynthesis","type":"exact"},{"name":"IP3 biosynthetic process","type":"exact"},{"name":"inositol trisphosphate anabolism","type":"exact"},{"name":"inositol trisphosphate biosynthesis","type":"exact"},{"name":"inositol trisphosphate formation","type":"exact"},{"name":"inositol trisphosphate synthesis","type":"exact"},{"name":"myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032959"}


id: GO:0034837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole-cis-6,7-dihydrodiol = 6,7-dihydroxy-2-mercaptobenzothiazole + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole-cis-6,7-dihydrodiol dehydrogenase activity (obsolete GO:0034837)","termid":"GO:0034837"}


id: PBO:0044048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP1 antisense RNA 1","termid":"PBO:0044048"}


id: PBO:0011505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component II, multifunctional enzyme (predicted)","termid":"PBO:0011505"}


id: MONDO:0001117
data:
  {"annotated_genes":["SJAG_03929","SJAG_04217","SJAG_00235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009606"},{"annotations":[84764,84765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009605"}]},"cv_name":"mondo","definition":"An inherited or acquired condition characterized by abnormally increased levels of methemoglobin in the blood.","definition_xrefs":["NCIT:C34817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobinopathy","termid":"MONDO:0044348"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_03929":null,"SJAG_04217":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"methemoglobinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6339","DOID:10783","MedDRA:10027496","MESH:D008708","SCTID:38959009","ICD9:289.7","UMLS:C0025637"],"synonyms":[{"name":"methemoglobinemias","type":"exact"}],"termid":"MONDO:0001117","terms_by_termid":{"MONDO:0009605":null,"MONDO:0009606":null},"xrefs":{"Monarch":{"xref_id":"0001117"}}}


id: GO:0015215
data:
  {"annotated_genes":["SJAG_04328","SJAG_02050","SJAG_00154","SJAG_00612","SJAG_03334","SJAG_03503","SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[100543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[110040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[102036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[106721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015230"},{"annotations":[114284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[92104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"},{"annotations":[98494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015218"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03503":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015215","terms_by_termid":{"GO:0001409":null,"GO:0005471":null,"GO:0015218":null,"GO:0015230":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: MONDO:1012805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in dogs due to a mutation in the SCN8A gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia, SCN8A-related, dog","secondary_identifiers":["OMIA:002194-9615"],"synonyms":[{"name":"ataxia, spinocerebellar, SCN8A-related, dog","type":"exact"}],"termid":"MONDO:1012805","xrefs":{"Monarch":{"xref_id":"1012805"}}}


id: MONDO:0957560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss, noise-induced, susceptibility to","secondary_identifiers":["OMIM:613035","MEDGEN:414426","UMLS:C2751629"],"termid":"MONDO:0957560","xrefs":{"Monarch":{"xref_id":"0957560"}}}


id: PBO:0113020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 5 subunit of the 20S proteasome; responsible for the chymotryptic activity of the proteasome; localizes to peroxisomes in oleate-growing cells","termid":"PBO:0113020"}


id: PBO:0003525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal receptor Pex5","termid":"PBO:0003525"}


id: PBO:0065201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 31","termid":"PBO:0065201"}


id: GO:1903617
data:
  {"annotated_genes":["SJAG_02392","SJAG_01787","SJAG_00845","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89977,95052,102881,109908,118456],"is_not":false,"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinesis, division site positioning.","definition_xrefs":["PMID:21246752","PMID:9852154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis, division site positioning","termid":"GO:1902472"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"positive regulation of cytokinesis, site selection","termid":"GO:2000076"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinesis, division site positioning","termid":"GO:1902408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"positive regulation of mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1903617","terms_by_termid":{"GO:1903617":null}}


id: MONDO:0033967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immune dysregulation with inflammatory bowel disease (obsolete MONDO:0033967)","secondary_identifiers":["Orphanet:529974"],"termid":"MONDO:0033967","xrefs":{"Monarch":{"xref_id":"0033967"}}}


id: PBO:0036401
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ6 with an S. pombe MTS","termid":"PBO:0036401"}


id: GO:0045015
data:
  {"annotated_genes":["SJAG_02418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112762],"is_not":false,"summary":null,"term":"GO:0045015"}]},"cv_name":"molecular_function","definition":"Binding to a HDEL sequence, the C terminus tetrapeptide sequence His-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["PMID:1327759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005048","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"HDEL sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HDEL receptor activity","type":"narrow"}],"termid":"GO:0045015","terms_by_termid":{"GO:0045015":null}}


id: MONDO:0006313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, mucus-filled cervical cyst that occurs when mucus-secreting columnar epithelial cells are covered with squamous epithelium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cervix neoplasm","termid":"MONDO:0021230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nabothian cyst","secondary_identifiers":["EFO:1000390","MEDGEN:6510","icd11.foundation:1329172977","UMLS:C0027269","Wikipedia:Nabothian_cyst","NCIT:C34835","SCTID:24565001"],"termid":"MONDO:0006313","xrefs":{"Monarch":{"xref_id":"0006313"}}}


id: CHEBI:35176
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc sulfate","termid":"CHEBI:35176"}


id: PBO:0052888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-11, pseudogene","termid":"PBO:0052888"}


id: FYPO:0007405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abnormal, and some of the protein is detected distributed throughout the cell cortex. There may be little or no protein detected at the medial cortex.","definition_xrefs":["PMID:32101481","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to medial cortex, with protein distributed in cell cortex, during vegetative growth","synonyms":[{"name":"abnormal protein localisation to medial cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortex, with protein distributed in cell cortex, during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial ring, with protein distributed in cell cortex, during vegetative growth","type":"exact"}],"termid":"FYPO:0007405"}


id: GO:0009350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the breakdown of ethanolamine to form acetaldehyde and ammonia.","definition_xrefs":["PMID:1550360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ethanolamine ammonia-lyase complex","termid":"GO:0009350"}


id: MONDO:0002606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiomyolipoma composed exclusively or predominantly by polygonal epithelioid cells with eosinophilic cytoplasm, often associated with cytologic atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiomyolipoma","termid":"MONDO:0002603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid type angiomyolipoma","secondary_identifiers":["MEDGEN:1386340","UMLS:C4518194","DOID:3318","NCIT:C38151"],"termid":"MONDO:0002606","xrefs":{"Monarch":{"xref_id":"0002606"}}}


id: GO:0005518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%).","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"collagen binding","termid":"GO:0005518"}


id: GO:1900793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of shamixanthone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"shamixanthone metabolic process","termid":"GO:1900791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"shamixanthone biosynthetic process","synonyms":[{"name":"shamixanthone anabolism","type":"exact"},{"name":"shamixanthone biosynthesis","type":"exact"},{"name":"shamixanthone formation","type":"exact"},{"name":"shamixanthone synthesis","type":"exact"}],"termid":"GO:1900793"}


id: GO:0070830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a tight junction, an occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction assembly","termid":"GO:0120192"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"bicellular tight junction assembly","synonyms":[{"name":"tight junction formation","type":"exact"}],"termid":"GO:0070830"}


id: GO:0052216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052216)","synonyms":[{"name":"chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052216"}


id: GO:0035572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dimethylation of the N-terminal serine of proteins to form the derivative N,N-dimethylserine.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine dimethylation","termid":"GO:0035572"}


id: PBO:0029115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_phase","termid":"PBO:0029115"}


id: PBO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by stress","termid":"PBO:0001412"}


id: MONDO:0018097
data:
  {"annotated_genes":["SJAG_04351","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013389"},{"annotations":[85358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014895"}]},"cv_name":"mondo","definition":"West syndrome (or infantile spasms) is characterized by the association of clusters of axial spasms, psychomotor retardation and an hypsarrhythmic interictal EEG pattern. It is the most frequent type of epileptic encephalopathy. It may occur in otherwise healthy infants and in those with abnormal cognitive development.","definition_xrefs":["Orphanet:3451"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete ARX-related epileptic encephalopathy (obsolete MONDO:0015921)","termid":"MONDO:0015921"},{"relation_name":"is_a","term_name":"infancy electroclinical syndrome","termid":"MONDO:0000413"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"neonatal/infantile epilepsy syndrome","termid":"MONDO:0100022"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_04351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"West syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200592","SCTID:28055006","MedDRA:10021750","NORD:1848","ICD9:345.60","NANDO:2200878","GARD:7887","NCIT:C84788","UMLS:C0037769","DOID:0050562","ICD9:348.89","MEDGEN:11519","icd11.foundation:1023597213"],"synonyms":[{"name":"Infantile spasms syndrome","type":"related"},{"name":"West's syndrome","type":"related"},{"name":"X-linked infantile spasm syndrome","type":"related"},{"name":"X-linked infantile spasms","type":"related"},{"name":"infantile spasms","type":"exact"},{"name":"intellectual disability-hypsarrhythmia syndrome","type":"exact"},{"name":"tonic spasms with clustering, arrest of psychomotor development and hypsarrhythmia on EEG","type":"related"}],"termid":"MONDO:0018097","terms_by_termid":{"MONDO:0013389":null,"MONDO:0014895":null},"xrefs":{"Monarch":{"xref_id":"0018097"}}}


id: GO:0003144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the embryonic heart tube. This process pertains to the initial formation of a structure from unspecified parts. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"embryonic heart tube morphogenesis","termid":"GO:0003143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube formation","termid":"GO:0003144"}


id: PATO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape in which the bearer's surface is lacking ridges, pits, rugosity or other surface structures.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornamentation","termid":"PATO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unornamented","termid":"PATO:0002442"}


id: PBO:0061914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 2","termid":"PBO:0061914"}


id: GO:0072707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium dodecyl sulfate (SDS) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sodium dodecyl sulfate","termid":"GO:0072706"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium dodecyl sulfate","synonyms":[{"name":"cellular response to SDS","type":"exact"}],"termid":"GO:0072707"}


id: GO:0010583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclopentenone stimulus. Cyclopentenones are oxylipins derived from polyunsaturated fatty acids. They are structurally similar to jasmonic acid, but contain a reactive unsaturated carbonyl structure in the cyclo-ring. Cyclopentenones include phytoprostanes and 12-oxo-phytodienoic acid.","definition_xrefs":["PMID:18334669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclopentenone","termid":"GO:0010583"}


id: GO:0034325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a decyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"decanoyltransferase activity","termid":"GO:0034328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"O-decanoyltransferase activity","termid":"GO:0034325"}


id: MONDO:0100570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A telomere biology disorder typically characterized by increased telomere length due to a pathogenic variant in the ACD gene that may cause familial melanoma.","direct_ancestors":[{"relation_name":"is_a","term_name":"ACD-related telomere biology disorder","termid":"MONDO:0800469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"ACD-related long telomere syndrome","termid":"MONDO:0100570","xrefs":{"Monarch":{"xref_id":"0100570"}}}


id: GO:0097137
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BAD and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BAD-BCL-xl complex","termid":"GO:0097137"}


id: MONDO:1011323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic disease, non-human animal","termid":"MONDO:1011323","xrefs":{"Monarch":{"xref_id":"1011323"}}}


id: GO:0031816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y6 nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"P2Y6 nucleotide receptor binding","synonyms":[{"name":"P2Y6 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031816"}


id: MONDO:0005469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden fall of the blood pressure of at least 20/10 mm Hg when a person stands up.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotensive disorder","termid":"MONDO:0005468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthostatic hypotension","secondary_identifiers":["ICD9:458.0","EFO:0005252","HP:0001278","icd11.foundation:56009591","MEDGEN:43803","SCTID:28651003","UMLS:C0020651"],"synonyms":[{"name":"orthostatic hypotension","type":"exact"},{"name":"orthostatic hypotension (disease)","type":"exact"}],"termid":"MONDO:0005469","xrefs":{"Monarch":{"xref_id":"0005469"}}}


id: GO:0007351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Subdivision of the embryo along the anterior/posterior axis into anterior, posterior and terminal regions.","definition_xrefs":["ISBN:0879694238","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tripartite regional subdivision","termid":"GO:0007351"}


id: GO:0099075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion by a mitochondrion-derived vesicle.","definition_xrefs":["GOC:bc","GOC:pad","PMID:37131163","GOC:PARL-UCL","PMID:20619655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transport","termid":"GO:0006839"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}


id: PBO:0080354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 9, pseudogene","termid":"PBO:0080354"}


id: GO:0005914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small cell-cell adherens junction assembled during the cellularization stage of insect embyrogenesis; spot adherens junctions later fuse to form the zonula adherens.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spot adherens junction","synonyms":[{"name":"dense plaque","type":"broad"},{"name":"punctum adherens","type":"exact"}],"termid":"GO:0005914"}


id: MOD:00587
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 6x(13)C, 4x(15)N labeled L-arginine.","definition_xrefs":["Unimod:267","OMSSA:137","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,4x(15)N labeled L-arginine","synonyms":[{"name":"13C(6) 15N(4) Silac label","type":"related"},{"name":"Label:13C(6)15N(4)","type":"related"},{"name":"arg-13c6-15n4","type":"exact"}],"termid":"MOD:00587"}


id: PBO:0079524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinase related protein 1","termid":"PBO:0079524"}


id: MONDO:0018852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achromatopsia (ACHM) is a rare autosomal recessive retinal disorder characterized by color blindness, nystagmus, photophobia, and severely reduced visual acuity due to the absence or impairment of cone function.","definition_xrefs":["Orphanet:49382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color vision disorder","termid":"MONDO:0001703"},{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"achromatopsia","secondary_identifiers":["MedDRA:10000454","UMLS:C0152200","NCIT:C84528","ICD9:368.54","DOID:13911","GARD:15015","ICD10CM:H53.51","MEDGEN:57751","SCTID:102450007"],"synonyms":[{"name":"ACHM","type":"exact"},{"name":"Pingelapese blindness","type":"exact"},{"name":"Rod monochromacy","type":"exact"},{"name":"Rod monochromatism","type":"exact"},{"name":"achromatopsia","type":"exact"},{"name":"complete or incomplete color blindness","type":"exact"},{"name":"complete or incomplete colour blindness","type":"exact"},{"name":"monochromatism","type":"exact"},{"name":"total color blindness","type":"exact"},{"name":"total colour blindness","type":"exact"}],"termid":"MONDO:0018852","xrefs":{"Monarch":{"xref_id":"0018852"}}}


id: GO:0071318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ATP","termid":"GO:0033198"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ATP","synonyms":[{"name":"cellular response to adenosine 5'-triphosphate","type":"exact"},{"name":"cellular response to adenosine triphosphate","type":"exact"}],"termid":"GO:0071318"}


id: PBO:0073211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 4C","termid":"PBO:0073211"}


id: GO:1900553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of asperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"asperfuranone metabolic process","termid":"GO:1900552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"asperfuranone catabolic process","synonyms":[{"name":"asperfuranone breakdown","type":"exact"},{"name":"asperfuranone catabolism","type":"exact"},{"name":"asperfuranone degradation","type":"exact"}],"termid":"GO:1900553"}


id: GO:0001093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor of the TFIIB class, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["GOC:krc","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TFIIB-class transcription factor binding","termid":"GO:0001093"}


id: PBO:0044981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHX33 divergent transcript","termid":"PBO:0044981"}


id: PBO:0088917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis","termid":"PBO:0088917"}


id: PBO:0075883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 beta-galactoside alpha-2,6-sialyltransferase 1","termid":"PBO:0075883"}


id: PATO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Shape quality inhering in a bearer by virtue of the bearer's being shaped like a wing.","direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aliform","synonyms":[{"name":"wing-shaped","type":"exact"}],"termid":"PATO:0002236"}


id: PBO:0081087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 17","termid":"PBO:0081087"}


id: GO:0046372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-arabinose, the D-enantiomer of arabino-pentose. D-arabinose occurs in plant glycosides and is a constituent of arabinonucleosides.","definition_xrefs":["GOC:mah","ISBN:0198506732","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-arabinose metabolic process","synonyms":[{"name":"D-arabinose metabolism","type":"exact"}],"termid":"GO:0046372"}


id: MONDO:0859372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic, 29, with polyglucosan bodies","secondary_identifiers":["MEDGEN:1824081","OMIM:620236","UMLS:C5774308"],"termid":"MONDO:0859372","xrefs":{"Monarch":{"xref_id":"0859372"}}}


id: PBO:0055061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2477","termid":"PBO:0055061"}


id: PBO:0046233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 27","termid":"PBO:0046233"}


id: MOD:00628
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with two hexose sugar groups through glycosidic bonds","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex2","termid":"MOD:00628"}


id: PBO:0005730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf20","termid":"PBO:0005730"}


id: PBO:0074315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 5","termid":"PBO:0074315"}


id: MONDO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the supraglottic area of the larynx. The vast majority of cases are squamous cell carcinomas.","definition_xrefs":["NCIT:C3545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"supraglottis neoplasm","termid":"MONDO:0004427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supraglottis cancer","secondary_identifiers":["DOID:13476","SCTID:187842004","UMLS:C0153484","ICD10CM:C32.1","MEDGEN:57561","ICD9:161.1"],"synonyms":[{"name":"Ca larynx - supraglottis","type":"exact"},{"name":"cancer of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of extrinsic larynx","type":"exact"},{"name":"malignant neoplasm of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of supraglottis","type":"exact"},{"name":"malignant neoplasm of the supraglottis","type":"exact"},{"name":"malignant supraglottic neoplasm","type":"exact"},{"name":"malignant supraglottic part of larynx neoplasm","type":"exact"},{"name":"malignant supraglottic tumor","type":"exact"},{"name":"malignant supraglottic tumour","type":"exact"},{"name":"malignant supraglottis neoplasm","type":"exact"},{"name":"malignant supraglottis tumor","type":"exact"},{"name":"malignant supraglottis tumour","type":"exact"},{"name":"malignant tumor of supraglottis","type":"exact"},{"name":"malignant tumor of the supraglottis","type":"exact"},{"name":"malignant tumour of supraglottis","type":"exact"},{"name":"malignant tumour of the supraglottis","type":"exact"},{"name":"supraglottic part of larynx cancer","type":"exact"}],"termid":"MONDO:0001724","xrefs":{"Monarch":{"xref_id":"0001724"}}}


id: PBO:0055056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2472","termid":"PBO:0055056"}


id: PATO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A porosity quality inhering in a bearer by virtue of the bearer's being incapable of admitting the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porosity","termid":"PATO:0000973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-porous","termid":"PATO:0000985"}


id: MONDO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete selective IgM deficiency disease (obsolete MONDO:0000289)","termid":"MONDO:0000289","xrefs":{"Monarch":{"xref_id":"0000289"}}}


id: PR:P33886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 2, skeletal/cardiac muscle that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase wis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.07c","secondary_identifiers":["UniProtKB:P33886"],"synonyms":[{"name":"SPBC409.07c","type":"related"},{"name":"Spom972h-MYLK2","type":"exact"},{"name":"protein kinase sty2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spc2","type":"related"},{"name":"sty2","type":"related"}],"termid":"PR:P33886"}


id: MONDO:0013165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 45 is a rare, pure or complex form of hereditary spastic paraplegia characterized by onset in infancy of progressive lower limb spasticity, abnormal gait, increased deep tendon reflexes and extensor plantar responses, that may be associated with intellectual disability. Additional signs, such as contractures in the lower limbs, amyotrophy, clubfoot and optic atrophy, have also been reported.","definition_xrefs":["Orphanet:320396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 45","secondary_identifiers":["DOID:0110797","OMIM:613162","GARD:17477","SCTID:765753004","MEDGEN:854816","UMLS:C3888209"],"synonyms":[{"name":"NT5C2 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG45","type":"exact"},{"name":"SPG65","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in NT5C2","type":"exact"},{"name":"autosomal recessive spastic paraplegia 45","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 45","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 65","type":"exact"},{"name":"hereditary spastic paraplegia type 45","type":"exact"},{"name":"spastic paraplegia 45, autosomal recessive","type":"related"}],"termid":"MONDO:0013165","xrefs":{"Monarch":{"xref_id":"0013165"}}}


id: PBO:0087545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNAPII-associated chromatin remodeling Paf1 complex; regulates gene expression by directing cotranscriptional histone modification, influences transcription and chromatin structure through several independent functional domains; directly or indirectly regulates DNA-binding properties of Spt15p and relative activities of different TATA elements; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay","termid":"PBO:0087545"}


id: FYPO:0009054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a higher than normal proportion of cells in the population remains viable after entering stationary phase, when subjected to glucose starvation.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased viability in stationary phase","termid":"FYPO:0001309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"increased viabilitiy in stationary phase upon glucose starvation","termid":"FYPO:0009054"}


id: PBO:0043058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin accessibility complex subunit 1","termid":"PBO:0043058"}


id: PBO:0034752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex ubiquitin-like protein ligase subunit Cti6","termid":"PBO:0034752"}


id: GO:0075177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium or calmodulin-mediated signal transduction in response to host (obsolete GO:0075177)","synonyms":[{"name":"modulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host","type":"exact"},{"name":"modulation of symbiont calcium or calmodulin-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075177"}


id: GO:0036048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a succinyl group (CO-CH2-CH2-CO) from a residue in a peptide or protein.","definition_xrefs":["GOC:sp","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein desuccinylation","termid":"GO:0036048"}


id: GO:1903303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of pyruvate kinase activity.","definition_xrefs":["PMID:15804508","GOC:TermGenie","GOC:mr","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pyruvate kinase activity (obsolete GO:1903303)","synonyms":[{"name":"down regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"down regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"down regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"down regulation of pyruvate kinase activity","type":"exact"},{"name":"down-regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"down-regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"down-regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"down-regulation of pyruvate kinase activity","type":"exact"},{"name":"downregulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"downregulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"downregulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"downregulation of pyruvate kinase activity","type":"exact"},{"name":"inhibition of ATP:pyruvate 2-O-phosphotransferase activity","type":"narrow"},{"name":"inhibition of phosphoenol transphosphorylase activity","type":"narrow"},{"name":"inhibition of phosphoenolpyruvate kinase activity","type":"narrow"},{"name":"inhibition of pyruvate kinase activity","type":"narrow"},{"name":"negative regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"negative regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"negative regulation of phosphoenolpyruvate kinase activity","type":"exact"}],"termid":"GO:1903303"}


id: GO:0009463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Diheme cytochrome b; cytochrome b has the hemes b(562) and b(566) and is a component of the mitochondrial respiratory chain complex III. Cytochrome b6 is a component of bc complex acting between photosystems II and I of photosynthesis.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome b/b6 (obsolete GO:0009463)","synonyms":[{"name":"cytochrome b/b6","type":"exact"}],"termid":"GO:0009463"}


id: GO:0097653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the intracellular environment and the plasma membrane; it excludes any external encapsulating structures.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unencapsulated part of cell","synonyms":[{"name":"non-encapsulated part of cell","type":"exact"}],"termid":"GO:0097653"}


id: PBO:0071812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 7","termid":"PBO:0071812"}


id: PBO:0081861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 793","termid":"PBO:0081861"}


id: PR:O43002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec61 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13509:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec61 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.03c","secondary_identifiers":["UniProtKB:O43002"],"synonyms":[{"name":"SPBC2G2.03c","type":"related"},{"name":"Spom972h-SEC61B","type":"exact"}],"termid":"PR:O43002"}


id: GO:0004890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels.","definition_xrefs":["PMID:8974333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor activity","termid":"GO:0016917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"GABA-A receptor activity","synonyms":[{"name":"ionotropic GABA receptor activity","type":"exact"}],"termid":"GO:0004890"}


id: GO:0034864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpentanal + H2O = 2,4,4-trimethylpentanoate + 3 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpentanal dehydrogenase activity (obsolete GO:0034864)","termid":"GO:0034864"}


id: GO:1905374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a homocysteine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:26722473","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to homocysteine","synonyms":[{"name":"response to 2-amino-4-mercaptobutyric acid","type":"exact"},{"name":"response to 2-amino-4-sulfanylbutanoic acid","type":"exact"},{"name":"response to Hcy","type":"exact"}],"termid":"GO:1905374"}


id: GO:0015947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methane metabolic process","synonyms":[{"name":"methane metabolism","type":"exact"}],"termid":"GO:0015947"}


id: GO:0021841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons toward the signal, where this process is involved in migration from the subpallium to the cortex.","definition_xrefs":["PMID:12626695","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"positive chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021841"}


id: PBO:0091356
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Target Of Sbf, after S. cerevisiae","termid":"PBO:0091356"}


id: GO:0010307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of acetylglutamate kinase.","definition_xrefs":["PMID:16377628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"acetylglutamate kinase regulator activity","termid":"GO:0010307"}


id: PBO:0043815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 6","termid":"PBO:0043815"}


id: PBO:0084696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial external NADH dehydrogenase; catalyzes the oxidation of cytosolic NADH; Nde1p and Nde2p are involved in providing the cytosolic NADH to the mitochondrial respiratory chain; NDE2 has a paralog, NDE1, that arose from the whole genome duplication","termid":"PBO:0084696"}


id: PBO:0109654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3117","termid":"PBO:0109654"}


id: PBO:0052982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ladinin 1","termid":"PBO:0052982"}


id: PBO:0062254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily C member 1","termid":"PBO:0062254"}


id: FYPO:0000361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the nucleolus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal nucleolus organization","termid":"FYPO:0000814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleolar morphology","synonyms":[{"name":"abnormal nucleolar morphology during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolar morphology during vegetative growth","type":"exact"},{"name":"nucleolar morphology: abnormal","type":"related"}],"termid":"FYPO:0000361"}


id: GO:0103082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + acetyl-CoA + H2O = H+ + 2-(4'-methylthio)butylmalate + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-(4'-methylthio)butylmalate synthase activity (obsolete GO:0103082)","termid":"GO:0103082"}


id: GO:0050453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 cob(I)alamin + H+ + NAD+ = 2 cob(II)alamin + NADH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cob(II)alamin reductase activity (obsolete GO:0050453)","synonyms":[{"name":"vitamin B12 reductase activity","type":"exact"},{"name":"vitamin B12 reduction","type":"related"}],"termid":"GO:0050453"}


id: GO:0098632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on the cell surface to an extracellular matrix component, to mediate adhesion of the cell to another cell.","definition_xrefs":["Wikipedia:Cell_adhesion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0098631","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cell-cell adhesion mediator activity","synonyms":[{"name":"cell-cell adhesion molecule","type":"exact"},{"name":"protein binding involved in cell-cell adhesion","type":"exact"}],"termid":"GO:0098632"}


id: FYPO:0001372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex of a spore is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex","termid":"FYPO:0001373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to medial cortex in spores","synonyms":[{"name":"abnormal protein localisation to medial cortex in spores","type":"exact"},{"name":"abnormal protein localization to medial ring in spores","type":"exact"}],"termid":"FYPO:0001372"}


id: GO:0070633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a substance from one side of an epithelium to the other.","definition_xrefs":["GOC:mah","GOC:yaf","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"transepithelial transport","termid":"GO:0070633"}


id: PBO:0028365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_septum_in_stationary_phase","termid":"PBO:0028365"}


id: GO:0016509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain (3S)-3-hydroxy fatty acyl-CoA + NAD+ = a long-chain 3-oxo-fatty acyl-CoA + H+ + NADH. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["EC:1.1.1.211","GOC:pde","RHEA:52656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxyacyl-CoA dehydrogenase activity","termid":"GO:0003857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"long-chain-3-hydroxyacyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.211-RXN"],"synonyms":[{"name":"LCHAD","type":"related"},{"name":"beta-hydroxyacyl-CoA dehydrogenase activity","type":"related"},{"name":"long-chain 3-hydroxyacyl coenzyme A dehydrogenase activity","type":"related"},{"name":"long-chain-(S)-3-hydroxyacyl-CoA:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0016509"}


id: MONDO:0015506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare syndrome with cardiac malformations (obsolete MONDO:0015506)","secondary_identifiers":["Orphanet:156532"],"termid":"MONDO:0015506","xrefs":{"Monarch":{"xref_id":"0015506"}}}


id: MONDO:0007068
data:
  {"annotated_genes":["SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84691],"is_not":false,"summary":null,"term":"MONDO:0007068"}]},"cv_name":"mondo","definition":"Adenylosuccinate lyase deficiency (ADSL deficiency) is a disorder of purine metabolism characterized by intellectual disability, psychomotor delay and/or regression, seizures, and autistic features.","definition_xrefs":["Orphanet:46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"adenylosuccinate lyase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1725611919","GARD:550","MEDGEN:78641","SCTID:15285008","MESH:C538235","ICD9:277.2","UMLS:C0268126","DOID:0050762","OMIM:103050"],"synonyms":[{"name":"ADSL deficiency","type":"exact"},{"name":"ADSLD","type":"related"},{"name":"Adsl deficiency","type":"related"},{"name":"adenylosuccinase deficiency","type":"exact"},{"name":"adenylosuccinase lyase deficiency","type":"related"},{"name":"adenylosuccinate lyase deficiency","type":"exact"},{"name":"inborn (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity disorder","type":"exact"},{"name":"inborn error of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity","type":"exact"},{"name":"rare inborn error of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity","type":"exact"}],"termid":"MONDO:0007068","terms_by_termid":{"MONDO:0007068":null},"xrefs":{"Monarch":{"xref_id":"0007068"}}}


id: PBO:0087473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both RNase MRP and nuclear RNase P; RNase MRP cleaves pre-rRNA, while nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs","termid":"PBO:0087473"}


id: PBO:0047179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 199, Y-linked, pseudogene","termid":"PBO:0047179"}


id: GO:0062234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of platelet activating factor, 2-O-acetyl-1-O-octadecyl-sn-glycero-3-phosphocholine.","definition_xrefs":["PMID:16371369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether catabolic process","termid":"GO:0044269"},{"relation_name":"is_a","term_name":"platelet activating factor metabolic process","termid":"GO:0046469"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"platelet activating factor catabolic process","synonyms":[{"name":"2-O-acetyl-1-O-octadecyl-sn-glycero-3-phosphocholine catabolic process","type":"exact"},{"name":"PAF catabolic process","type":"related"}],"termid":"GO:0062234"}


id: PBO:0043005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase, acidic pseudogene 3","termid":"PBO:0043005"}


id: MONDO:0003564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Replacement of the lung tissue by connective tissue in a specific area of the lung.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localized pulmonary fibrosis","secondary_identifiers":["SCTID:233726000","UMLS:C0340127","DOID:5642","MEDGEN:137936","NCIT:C27103"],"termid":"MONDO:0003564","xrefs":{"Monarch":{"xref_id":"0003564"}}}


id: PBO:0066416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renin binding protein","termid":"PBO:0066416"}


id: PBO:0071683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 15","termid":"PBO:0071683"}


id: PBO:0068739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 2, pseudogene","termid":"PBO:0068739"}


id: PR:Q9Y7T3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA(His) guanylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(His) guanylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.07","secondary_identifiers":["UniProtKB:Q9Y7T3"],"synonyms":[{"name":"Spom972h-THG1L","type":"exact"},{"name":"tRNA-histidine guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7T3"}


id: GO:0044538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the cell cortex, the plasma membrane, and any external encapsulating structures of a host cell.","definition_xrefs":["PMID:20463076","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell periphery","termid":"GO:0044538"}


id: GO:0039698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polyadenylation of viral mRNA through a polymerase stuttering mechanism. The stop signal present at the end of each gene comprises a stretch of uridine on which the viral polymerase acquires a stuttering behavior: after each adenine inserted, the polymerase moves back one nucleotide along with the mRNA. It resumes transcription adding a new adenine, then again moves back, thereby producing a polyA tail.","definition_xrefs":["VZ:1916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation of viral mRNA by polymerase stuttering","synonyms":[{"name":"polyA stuttering","type":"exact"}],"termid":"GO:0039698"}


id: PR:Q10178-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q10178-2.","definition_xrefs":["PRO:DNx","UniProtKB:Q10178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q10178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 isoform B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q10178-2"],"synonyms":[{"name":"Spom972h-SF3B1/iso:B","type":"exact"}],"termid":"PR:Q10178-2"}


id: FYPO:0007053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to zinc ion starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to zinc ion starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"decreased protein level during cellular response to zinc ion depletion","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion deprivation","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion limitation","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"decreased protein level during cellular response to zinc starvation","type":"exact"},{"name":"reduced protein level during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0007053"}


id: GO:0033391
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182).","definition_xrefs":["PMID:17183363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromatoid body","termid":"GO:0033391"}


id: GO:0097619
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a protein trafficking machinery and is responsible for the export of proteins across the parasitophorous (symbiont-containing) vacuolar membrane and into the human host cell. The PTEX complex is located in the vacuole membrane. It is ATP-powered, and comprises heat shock protein 101 (HSP101; a ClpA/B-like ATPase from the AAA+ superfamily, of a type commonly associated with protein translocons), a parasite protein termed PTEX150, and exported protein 2 (EXP2). EXP2 is the potential channel, as it is the membrane-associated component of the core PTEX complex. Two other proteins, PTEX88 and thioredoxin 2 (TRX2), were also identified as PTEX components.","definition_xrefs":["PMID:25043043","PMID:19536257","GOC:pr","PMID:25043010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"symbiont-containing vacuole membrane","termid":"GO:0020005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"PTEX complex","synonyms":[{"name":"Plasmodium translocon of exported proteins","type":"related"}],"termid":"GO:0097619"}


id: MONDO:0005575
data:
  {"annotated_genes":["SJAG_02748","SJAG_01837","SJAG_02187","SJAG_03453","SJAG_02231","SJAG_04699","SJAG_02426","SJAG_02226","SJAG_01082","SJAG_00980","SJAG_04394","SJAG_01620","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85704,85705,85706,85707,85708,85709,85710,85711,86556],"is_not":false,"summary":null,"term":"MONDO:0005575"},{"annotations":[85596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[84417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[84867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[84869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[84879,84880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the colon or rectum. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C4978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colorectal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:363510005","UMLS:C0346629","OMIM:114500","MEDGEN:83428","DOID:9256","DOID:5672","Orphanet:466667"],"synonyms":[{"name":"CRC","type":"related"},{"name":"cancer of colorectum","type":"exact"},{"name":"cancer of large bowel","type":"exact"},{"name":"cancer of large intestine","type":"exact"},{"name":"cancer of the large bowel","type":"exact"},{"name":"colon cancer","type":"related"},{"name":"colon cancer, advanced, somatic","type":"exact"},{"name":"colon cancer, somatic","type":"exact"},{"name":"colon cancer, susceptibility to, autosomal dominant, somatic mutation","type":"related"},{"name":"colorectal cancer","type":"exact"},{"name":"colorectal cancer with chromosomal instability, somatic","type":"exact"},{"name":"colorectal cancer, autosomal dominant, somatic mutation","type":"exact"},{"name":"colorectal cancer, somatic","type":"exact"},{"name":"colorectal cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"},{"name":"colorectum cancer","type":"exact"},{"name":"large intestine cancer","type":"related"},{"name":"malignant colorectal neoplasm","type":"exact"},{"name":"malignant colorectal tumor","type":"exact"},{"name":"malignant colorectal tumour","type":"exact"},{"name":"malignant colorectum neoplasm","type":"exact"},{"name":"malignant large bowel neoplasm","type":"exact"},{"name":"malignant large bowel tumor","type":"exact"},{"name":"malignant large bowel tumour","type":"exact"},{"name":"malignant large intestine neoplasm","type":"exact"},{"name":"malignant large intestine tumor","type":"exact"},{"name":"malignant large intestine tumour","type":"exact"},{"name":"malignant neoplasm of colorectum","type":"exact"},{"name":"malignant neoplasm of large bowel","type":"exact"},{"name":"malignant neoplasm of large intestine","type":"exact"},{"name":"malignant neoplasm of the large bowel","type":"exact"},{"name":"malignant neoplasm of the large intestine","type":"exact"},{"name":"malignant tumor of large bowel","type":"exact"},{"name":"malignant tumor of large intestine","type":"exact"},{"name":"malignant tumor of the large bowel","type":"exact"},{"name":"malignant tumor of the large intestine","type":"exact"},{"name":"malignant tumour of large bowel","type":"exact"},{"name":"malignant tumour of large intestine","type":"exact"},{"name":"malignant tumour of the large bowel","type":"exact"},{"name":"malignant tumour of the large intestine","type":"exact"}],"termid":"MONDO:0005575","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0005575"}}}


id: MONDO:0009179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe generalized recessive dystrophic epidermolysis bullosa (RDEB-sev gen) is the most severe subtype of dystrophic epidermolysis bullosa (DEB), formerly known as the Hallopeau-Siemens type, and is characterized by generalized cutaneous and mucosal blistering and scarring associated with severe deformities and major extracutaneous involvement.","definition_xrefs":["Orphanet:79408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"recessive dystrophic epidermolysis bullosa","secondary_identifiers":["NANDO:1200238","ICD9:757.39","MEDGEN:36311","DOID:0060642","GARD:6308","NANDO:2201383","OMIM:226600","UMLS:C0079474","SCTID:48528004"],"synonyms":[{"name":"EBD inversa","type":"exact"},{"name":"RDEB","type":"related"},{"name":"RDEB generalisata gravis","type":"exact"},{"name":"RDEB, Hallopeau-Siemens type","type":"exact"},{"name":"RDEB, severe generalised","type":"related"},{"name":"RDEB, severe generalized","type":"related"},{"name":"RDEB-sev gen","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa generalisata gravis","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, Hallopeau-Siemens type","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, Hallopeau-Siemens type (formerly)","type":"related"},{"name":"dystrophic epidermolysis bullosa, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica inversa, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica, AR","type":"exact"},{"name":"epidermolysis bullosa dystrophica, Hallopeau-Siemens type","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal recessive, Localisata variant","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal recessive, modifier of","type":"exact"},{"name":"epidermolysis bullosa dystrophica, generalised severe, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica, generalized severe, autosomal recessive","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, severe generalised","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, severe generalized","type":"related"},{"name":"severe generalised RDEB","type":"narrow"},{"name":"severe generalised recessive dystrophic epidermolysis bullosa","type":"narrow"},{"name":"severe generalized RDEB","type":"narrow"},{"name":"severe generalized recessive dystrophic epidermolysis bullosa","type":"narrow"}],"termid":"MONDO:0009179","xrefs":{"Monarch":{"xref_id":"0009179"}}}


id: PBO:0054195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1570","termid":"PBO:0054195"}


id: PBO:0073700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKAP1 antisense RNA 1","termid":"PBO:0073700"}


id: PBO:0036143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0036143"}


id: MONDO:0000818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal congenital contracture syndrome 4 (obsolete MONDO:0000818)","termid":"MONDO:0000818","xrefs":{"Monarch":{"xref_id":"0000818"}}}


id: GO:0042113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell activation","synonyms":[{"name":"B lymphocyte activation","type":"exact"},{"name":"B-cell activation","type":"exact"},{"name":"B-lymphocyte activation","type":"exact"}],"termid":"GO:0042113"}


id: GO:0035621
data:
  {"annotated_genes":["SJAG_04413","SJAG_01437","SJAG_00355","SJAG_00176","SJAG_01116","SJAG_03690"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93443,100973,106184,108774,116642,117804],"is_not":false,"summary":null,"term":"GO:0035621"}]},"cv_name":"biological_process","definition":"The directed movement of a ceramide from the endoplasmic reticulum (ER) to the Golgi. Ceramides are a class of lipid composed of sphingosine linked to a fatty acid.","definition_xrefs":["GOC:sart","PMID:14685229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"},{"relation_name":"is_a","term_name":"ceramide transport","termid":"GO:0035627"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00355":null,"SJAG_01116":null,"SJAG_01437":null,"SJAG_03690":null,"SJAG_04413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"ER to Golgi ceramide transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER to Golgi ceramide translocation","type":"exact"},{"name":"endoplasmic reticulum to Golgi ceramide transport","type":"exact"},{"name":"non-vesicular ceramide trafficking","type":"exact"}],"termid":"GO:0035621","terms_by_termid":{"GO:0035621":null}}


id: GO:0031464
data:
  {"annotated_genes":["SJAG_04540"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110289],"is_not":false,"summary":null,"term":"GO:0031464"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul4A subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cul4-RING E3 ubiquitin ligase complex","termid":"GO:0080008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul4A-RING E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CDL4 complex","type":"exact"},{"name":"CRL4 complex","type":"exact"},{"name":"DCX complex","type":"exact"},{"name":"SCF4 complex","type":"related"},{"name":"VDC complex","type":"narrow"},{"name":"cullin-RING ligase 4A","type":"exact"}],"termid":"GO:0031464","terms_by_termid":{"GO:0031464":null}}


id: PBO:0034789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase Msp1","termid":"PBO:0034789"}


id: GO:0006020
data:
  {"annotated_genes":["SJAG_03739","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114176],"is_not":false,"summary":null,"term":"GO:0006020"},{"annotations":[65386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_03739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Inositol"],"synonyms":[{"name":"inositol metabolism","type":"exact"},{"name":"myo-inositol metabolic process","type":"narrow"},{"name":"myo-inositol metabolism","type":"narrow"},{"name":"vitamin Bh metabolic process","type":"exact"},{"name":"vitamin Bh metabolism","type":"exact"}],"termid":"GO:0006020","terms_by_termid":{"GO:0006020":null,"GO:0006021":null}}


id: MONDO:0010649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital megalocornea is a genetic, non-syndromic developmental defect of the anterior eye segment characterized by bilateral enlargement of the corneal diameter (>12.5 mm) and a deep anterior eye chamber, without an elevation in intraocular pressure. It can manifest with mild to moderate myopia as well as photophobia and iridodonesis (due to iris hypoplasia). Associated complications include lens dislocation, retinal detachment, presenile cataract development, and secondary glaucoma.","definition_xrefs":["Orphanet:91489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megalocornea","termid":"MONDO:0009576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated congenital megalocornea","secondary_identifiers":["GARD:12648","OMIM:309300","MEDGEN:1385311","UMLS:C4518341","SCTID:734026006"],"synonyms":[{"name":"MGC1","type":"related"},{"name":"Mgcn","type":"related"},{"name":"congenital anterior megalophthalmia","type":"exact"},{"name":"isolated congenital megalocornea","type":"exact"},{"name":"megalocornea","type":"related"},{"name":"megalocornea 1, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010649","xrefs":{"Monarch":{"xref_id":"0010649"}}}


id: MONDO:0015971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic adrenal disease (obsolete MONDO:0015971)","secondary_identifiers":["Orphanet:183637"],"termid":"MONDO:0015971","xrefs":{"Monarch":{"xref_id":"0015971"}}}


id: GO:0033275
data:
  {"annotated_genes":["SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116769],"is_not":false,"summary":null,"term":"GO:0033275"}]},"cv_name":"biological_process","definition":"The sliding movement of actin thin filaments and myosin thick filaments past each other.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-myosin filament sliding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament sliding","type":"related"}],"termid":"GO:0033275","terms_by_termid":{"GO:0033275":null}}


id: GO:0072324
data:
  {"annotated_genes":["SJAG_01017","SJAG_00146","SJAG_01855","SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92752,93211,94358,110454],"is_not":false,"summary":null,"term":"GO:0072324"}]},"cv_name":"cellular_component","definition":"Ascus cytoplasm that is not packaged into ascospores.","definition_xrefs":["GOC:mcc","DOI:10.1016/S0953-7562(96)80057-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00146":null,"SJAG_01017":null,"SJAG_01855":null,"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus epiplasm","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072324","terms_by_termid":{"GO:0072324":null}}


id: PBO:0062054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OR2W1 antisense RNA 1","termid":"PBO:0062054"}


id: GO:0015438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + teichoic acid(in) = ADP + phosphate + teichoic acid(out).","definition_xrefs":["PMID:7565096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type teichoic acid transporter activity","secondary_identifiers":["EC:7.5.2.4","GO:0015162","MetaCyc:3.6.3.40-RXN"],"synonyms":[{"name":"ABC-type teichoic-acid transporter","type":"exact"},{"name":"ATP-dependent teichoic acid transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled teichoic acid transmembrane transporter activity","type":"related"},{"name":"teichoic acid transmembrane transporter activity","type":"broad"},{"name":"teichoic-acid ABC transporter","type":"exact"},{"name":"teichoic-acid-transporting ATPase activity","type":"related"}],"termid":"GO:0015438"}


id: GO:0052249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of RNA in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of RNA levels in other organism involved in symbiotic interaction (obsolete GO:0052249)","synonyms":[{"name":"modulation of RNA levels in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052249"}


id: GO:0102532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: genkwanin + O2 + reduced [NADPH--hemoprotein reductase] = H2O + oxidized [NADPH--hemoprotein reductase] + scutellarein 7-methyl ether.","definition_xrefs":["RHEA:73427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"genkwanin 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14748"],"termid":"GO:0102532"}


id: MONDO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete axial osteomalacia (obsolete MONDO:0000848)","termid":"MONDO:0000848","xrefs":{"Monarch":{"xref_id":"0000848"}}}


id: MONDO:0800224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, susceptibility to, 13","secondary_identifiers":["UMLS:C3149907","MEDGEN:461257"],"synonyms":[{"name":"ALS13","type":"exact"}],"termid":"MONDO:0800224","xrefs":{"Monarch":{"xref_id":"0800224"}}}


id: FYPO:0005987
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"}],"single_locus_phenotype":[{"annotations":[118500,118444,118497,118498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[118499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell tip is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01143":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell tip","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal protein localisation to cell tip","type":"exact"},{"name":"abnormal protein localization to cell end","type":"exact"}],"termid":"FYPO:0005987","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null,"FYPO:0005503":null}}


id: PBO:0089495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24","termid":"PBO:0089495"}


id: FYPO:0008200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a lower extent than normal at the centromere inner repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008200"}


id: GO:0018363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent linkage of heme to peroxidase via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium.","definition_xrefs":["RESID:AA0280"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxidase-heme linkage via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium (obsolete GO:0018363)","synonyms":[{"name":"peroxidase-haem linkage via dihydroxyhaem-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium","type":"exact"},{"name":"peroxidase-heme linkage via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulphonium","type":"exact"}],"termid":"GO:0018363"}


id: PBO:0029484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_curved_cells_(obsolete_FYPO:0002231)","termid":"PBO:0029484"}


id: PBO:0044214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortactin","termid":"PBO:0044214"}


id: GO:2000909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sterol import.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"regulates","term_name":"sterol import","termid":"GO:0035376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of sterol import","synonyms":[{"name":"regulation of sterol influx","type":"exact"},{"name":"regulation of sterol uptake","type":"exact"}],"termid":"GO:2000909"}


id: MONDO:0016018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetic embryopathy is characterized by congenital anomalies or fetal/neonatal complications in an infant that are linked to diabetes in the mother.","definition_xrefs":["Orphanet:1926"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete teratogenic Pierre Robin syndrome (obsolete MONDO:0015323)","termid":"MONDO:0015323"},{"relation_name":"excluded_subClassOf","term_name":"non-familial hypertrophic cardiomyopathy","termid":"MONDO:0016330"},{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetic embryopathy","secondary_identifiers":["SCTID:716020005","NCIT:C113485","UMLS:C3830518","icd11.foundation:778367655","MEDGEN:823266","GARD:16580"],"termid":"MONDO:0016018","xrefs":{"Monarch":{"xref_id":"0016018"}}}


id: GO:0043481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of the pigment anthocyanin in a particular location in a tissue, occurring in response to a UV light stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment accumulation in tissues in response to UV light","termid":"GO:0043479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin accumulation in tissues in response to UV light","termid":"GO:0043481"}


id: PATO:0000690
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's being marked by breaks or interruptions.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discontinuous","secondary_identifiers":["PATO:0000426"],"synonyms":[{"name":"intermittent","type":"related"},{"name":"interrupted","type":"exact"}],"termid":"PATO:0000690"}


id: MONDO:0007480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism with stiff joints and ocular abnormalities","secondary_identifiers":["MEDGEN:82709","Orphanet:2569","UMLS:C0265349","OMIM:127200","SCTID:72913007","MESH:C535724","ICD9:759.89"],"synonyms":[{"name":"Moore-Federman syndrome","type":"related"},{"name":"dwarfism with stiff joints and ocular abnormalities","type":"exact"}],"termid":"MONDO:0007480","xrefs":{"Monarch":{"xref_id":"0007480"}}}


id: MOD:00785
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-acetyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N2-acetyl-L-tryptophan","synonyms":[{"name":"AcTrp","type":"exact"}],"termid":"MOD:00785"}


id: GO:0106032
data:
  {"annotated_genes":["SJAG_00088","SJAG_04754","SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94553,105393,113430],"is_not":false,"summary":null,"term":"GO:0106032"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine in snRNA = pseudouridine in snRNA. Conversion of uridine in an snRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["RHEA:51124","PMID:28432181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthase activity","termid":"GO:0009982"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_03572":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"snRNA pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106032","terms_by_termid":{"GO:0106032":null}}


id: PATO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a leaf.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leaf-like","termid":"PATO:0002457"}


id: PBO:0063624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1","termid":"PBO:0063624"}


id: PBO:0005437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM checkpoint kinase","termid":"PBO:0005437"}


id: PBO:0042958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 3","termid":"PBO:0042958"}


id: MONDO:0014185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3q13 microdeletion syndrome is a rare chromosomal anomaly syndrome resulting from a partial deletion of the long arm of chromosome 3. Phenotype can be highly variable, but it is primarily characterized by significant developmental delay, postnatal growth above the mean, muscular hypotonia and distinctive facial features (such as broad and prominent forehead, hypertelorism, epicantic folds, anti-mongloid slanted eyes, ptosis, short philtrum, protruding lips with a full lower lip, high arched palate). Abnormal hypoplastic male genitalia and skeletal abnormalities are frequently present.","definition_xrefs":["Orphanet:1621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 3","termid":"MONDO:0016902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3q13.31 deletion syndrome","secondary_identifiers":["MESH:C536808","DOID:0060418","MEDGEN:815820","OMIM:615433","SCTID:726705007","UMLS:C3809490","GARD:16573"],"synonyms":[{"name":"3q13 microdeletion syndrome","type":"exact"},{"name":"Del(3)(q13)","type":"exact"},{"name":"chromosome 3q13.31 deletion syndrome","type":"exact"},{"name":"monosomy 3q13","type":"exact"}],"termid":"MONDO:0014185","xrefs":{"Monarch":{"xref_id":"0014185"}}}


id: PBO:0034616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_recombination_double-strand_break_repair","termid":"PBO:0034616"}


id: GO:0097178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ruffle, a projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork. The formation of ruffles (also called membrane ruffling) is thought to be controlled by a group of enzymes known as Rho GTPases, specifically RhoA, Rac1 and cdc42.","definition_xrefs":["GOC:yaf","Wikipedia:Membrane_ruffling","PMID:12556481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ruffle organization","termid":"GO:0031529"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"ruffle assembly","synonyms":[{"name":"membrane ruffle formation","type":"exact"},{"name":"membrane ruffling","type":"exact"}],"termid":"GO:0097178"}


id: PBO:0082211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,6-mannosyltransferase localized to the ER; responsible for addition of alpha-1,6 mannose to dolichol-linked Man7GlcNAc2; acts in the dolichol pathway for N-glycosylation; human homolog ALG12 complements yeast null mutant","termid":"PBO:0082211"}


id: GO:0061243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric renal vesicle are generated and organized. The renal vesicle is the primordial structure of the mesonephric nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle morphogenesis","termid":"GO:0072077"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle morphogenesis","termid":"GO:0061243"}


id: GO:0032921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of 4 protein subunits as a heterotetramer, that possesses sarcosine oxidase activity.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sarcosine oxidase complex","termid":"GO:0032921"}


id: MONDO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon, aggressive malignant smooth muscle neoplasm. It is characterized by the presence of atypical large spindle or round cells, nuclear palisading, tumor cell necrosis, mitotic figures and may be associated with vascular invasion.","definition_xrefs":["NCIT:C9428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"conventional leiomyosarcoma","secondary_identifiers":["MEDGEN:232394","DOID:5253","UMLS:C1333157"],"synonyms":[{"name":"classic leiomyosarcoma","type":"exact"},{"name":"conventional leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003348","xrefs":{"Monarch":{"xref_id":"0003348"}}}


id: PBO:0066681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLIG1 pseudogene 3","termid":"PBO:0066681"}


id: PBO:0078944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 2-1","termid":"PBO:0078944"}


id: GO:0000054
data:
  {"annotated_genes":["SJAG_02250","SJAG_01338","SJAG_03729","SJAG_01339","SJAG_00471","SJAG_03012","SJAG_04148","SJAG_02210","SJAG_04308","SJAG_03299","SJAG_02274","SJAG_03719","SJAG_04721","SJAG_00178","SJAG_03593","SJAG_01013","SJAG_01449","SJAG_01358","SJAG_01065","SJAG_02757","SJAG_04940","SJAG_03882","SJAG_00753","SJAG_04379","SJAG_01391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88218,90921,93186,94175,95320,96262,99600,100577,101835,103120,104547,105319,109574,110585,115298],"is_not":false,"summary":null,"term":"GO:0000054"},{"annotations":[116805,88987,101059,115363,90288,104907,102176,98832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[99011,90289,96269,102177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"}]},"cv_name":"biological_process","definition":"The directed movement of a ribosomal subunit from the nucleus into the cytoplasm.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"ribosome localization","termid":"GO:0033750"},{"relation_name":"is_a","term_name":"nuclear export","termid":"GO:0051168"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_00471":null,"SJAG_00753":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01391":null,"SJAG_01449":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02757":null,"SJAG_03012":null,"SJAG_03299":null,"SJAG_03593":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03882":null,"SJAG_04148":null,"SJAG_04308":null,"SJAG_04379":null,"SJAG_04721":null,"SJAG_04940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0044085","GO:0006810","GO:0042254","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ribosomal subunit export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal subunit export from cell nucleus","type":"exact"},{"name":"ribosomal subunit export out of nucleus","type":"exact"},{"name":"ribosomal subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"ribosomal subunit-nucleus export","type":"exact"},{"name":"ribosome export from nucleus","type":"related"}],"termid":"GO:0000054","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null}}


id: PBO:0005519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Spc25","termid":"PBO:0005519"}


id: MONDO:0007636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontorhiny is a distinct syndromic type of frontonasal malformation characterized by hypertelorism, wide nasal bridge, broad columella, widened philtrum, widely separated narrow nares, poor development of nasal tip, midline notch of the upper alveolus, columella base swellings and a low hairline. Additional features reported in some include upper eyelid ptosis and midline dermoid cysts of craniofacial structures and philtral pits or rugose folding behind the ears. An autosomal recessive inheritance has been proposed.","definition_xrefs":["Orphanet:391474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"frontorhiny","secondary_identifiers":["GARD:12642","NCIT:C129028","DOID:0081045","OMIM:136760","UMLS:C5574965","MEDGEN:1803615"],"synonyms":[{"name":"ALX3-related frontonasal dysplasia","type":"exact"},{"name":"FND1","type":"related"},{"name":"frontonasal dysplasia","type":"related"},{"name":"frontonasal dysplasia 1","type":"related"},{"name":"frontonasal dysplasia type 1","type":"exact"},{"name":"frontonasal malformation","type":"related"},{"name":"frontorhiny","type":"exact"},{"name":"isolated median cleft face syndrome","type":"exact"},{"name":"isolated median cleft syndrome","type":"related"},{"name":"median Facial cleft syndrome","type":"related"}],"termid":"MONDO:0007636","xrefs":{"Monarch":{"xref_id":"0007636"}}}


id: GO:0102747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + chlorophyllide a(1-) + 2-trans,6-trans,10-trans-geranylgeranyl diphosphate(3-) = geranylgeranyl-chlorophyll a + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorophyllide-a:geranyl-geranyl diphosphate geranyl-geranyl transferase activity (obsolete GO:0102747)","termid":"GO:0102747"}


id: PBO:0039166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 9","termid":"PBO:0039166"}


id: GO:1901098
data:
  {"annotated_genes":["SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96815],"is_not":false,"summary":null,"term":"GO:1901098"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of autophagosome maturation.","definition_xrefs":["PMID:10436019","GOC:autophagy","GOC:TermGenie","PMID:21383079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"regulation of autophagosome maturation","termid":"GO:1901096"},{"relation_name":"positively_regulates","term_name":"autophagosome maturation","termid":"GO:0097352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagosome maturation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902454"],"synonyms":[{"name":"activation of amphisome-lysosome fusion","type":"narrow"},{"name":"activation of autolysosome formation","type":"narrow"},{"name":"activation of autophagic vacuole fusion","type":"narrow"},{"name":"activation of autophagic vacuole maturation","type":"narrow"},{"name":"activation of autophagosome maturation","type":"exact"},{"name":"activation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"positive regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"positive regulation of autolysosome formation","type":"narrow"},{"name":"positive regulation of autophagic vacuole fusion","type":"exact"},{"name":"positive regulation of autophagosome fusion","type":"exact"},{"name":"positive regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"up regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"up regulation of autolysosome formation","type":"narrow"},{"name":"up regulation of autophagic vacuole fusion","type":"exact"},{"name":"up regulation of autophagic vacuole maturation","type":"exact"},{"name":"up regulation of autophagosome maturation","type":"exact"},{"name":"up regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"up-regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"up-regulation of autolysosome formation","type":"narrow"},{"name":"up-regulation of autophagic vacuole fusion","type":"exact"},{"name":"up-regulation of autophagic vacuole maturation","type":"exact"},{"name":"up-regulation of autophagosome maturation","type":"exact"},{"name":"up-regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"upregulation of amphisome-lysosome fusion","type":"narrow"},{"name":"upregulation of autolysosome formation","type":"narrow"},{"name":"upregulation of autophagic vacuole fusion","type":"exact"},{"name":"upregulation of autophagic vacuole maturation","type":"exact"},{"name":"upregulation of autophagosome maturation","type":"exact"},{"name":"upregulation of fusion of autophagosome with lysosome","type":"narrow"}],"termid":"GO:1901098","terms_by_termid":{"GO:1901098":null}}


id: SO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA comprising an extended inverted repeat, the stem of which is typically much longer than that of miRNA precursors and can be up to 400 base pairs in length. hpRNAs are processed by Dicer-2 to generate endogenous short interfering RNAs (siRNAs).","definition_xrefs":["PMID:18719707","PMID:25544562","PMID:18463630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hpRNA","synonyms":[{"name":"Hairpin RNA","type":"exact"}],"termid":"SO:0002356"}


id: MONDO:0014472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic fever-infantile enterocolitis-autoinflammatory syndrome","secondary_identifiers":["OMIM:616050","NORD:1939","UMLS:C4015067","Orphanet:436166","NANDO:1200994","MEDGEN:863504","GARD:17725","NANDO:2200459"],"synonyms":[{"name":"AIFEC","type":"related"},{"name":"AUTOINFLAMMATION with infantile enterocolitis","type":"related"},{"name":"Autoinflammation with Infantile Enterocolitis","type":"exact"},{"name":"NLRC4-related MAS","type":"exact"},{"name":"NLRC4-related autoinflammatory syndrome with MAS","type":"exact"},{"name":"NLRC4-related autoinflammatory syndrome with macrophage activation syndrome","type":"exact"},{"name":"NLRC4-related infantile enterocolitis-autoinflammatory syndrome","type":"exact"},{"name":"NLRC4-related macrophage activation syndrome","type":"exact"},{"name":"autoinflammation with infantile enterocolitis","type":"exact"}],"termid":"MONDO:0014472","xrefs":{"Monarch":{"xref_id":"0014472"}}}


id: PBO:0085593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; Bud14p-Glc7p complex is a cortical regulator of dynein; forms a complex with Kel1p and Kel2p that regulates Bnr1p (formin) to affect actin cable assembly, cytokinesis, and polarized growth; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085593"}


id: PBO:0080034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 20","termid":"PBO:0080034"}


id: PBO:0005748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase Tpx1","termid":"PBO:0005748"}


id: GO:0017076
data:
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id: FYPO:0008239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of free polyphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular polyphosphate level","termid":"FYPO:0007816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased free cellular polyphosphate level","termid":"FYPO:0008239"}


id: FYPO:0004791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is greater than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22959349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"increased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"increased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"increased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004791"}


id: GO:0015417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + polyamine(out) = ADP + phosphate + polyamine(in).","definition_xrefs":["RHEA:29999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type polyamine transporter activity","secondary_identifiers":["EC:7.6.2.11","MetaCyc:3.6.3.31-RXN","GO:0015595"],"synonyms":[{"name":"ATP-dependent polyamine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled polyamine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled spermidine transmembrane transporter activity","type":"narrow"},{"name":"polyamine ABC transporter","type":"narrow"},{"name":"polyamine porter activity","type":"broad"},{"name":"polyamine-importing ATPase activity","type":"narrow"},{"name":"polyamine-transporting ATPase activity","type":"related"},{"name":"spermidine porter activity","type":"narrow"},{"name":"spermidine-importing ATPase activity","type":"narrow"}],"termid":"GO:0015417"}


id: GO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK during sporulation (sensu Saccharomyces) (obsolete GO:0000203)","synonyms":[{"name":"activation of MAPKKK during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000203"}


id: MONDO:0015122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare diabetes mellitus.","gene_count":0,"genotype_count":0,"name":"obsolete rare diabetes mellitus (obsolete MONDO:0015122)","secondary_identifiers":["Orphanet:101952"],"synonyms":[{"name":"rare diabetes mellitus","type":"exact"},{"name":"rare diabetes mellitus (disease)","type":"exact"}],"termid":"MONDO:0015122","xrefs":{"Monarch":{"xref_id":"0015122"}}}


id: GO:0007085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear membrane vesicle binding to chromatin (obsolete GO:0007085)","synonyms":[{"name":"nuclear membrane vesicle binding to chromatin","type":"exact"}],"termid":"GO:0007085"}


id: FYPO:0001430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested before cells have replicated genomic DNA, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased number of cells with 1C DNA content","termid":"FYPO:0001974"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with unreplicated DNA","synonyms":[{"name":"abnormal cell cycle arrest with unreplicated DNA during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle arrest with 1C DNA content","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with unreplicated DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0001430"}


id: GO:0048079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"regulates","term_name":"cuticle pigmentation","termid":"GO:0048067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cuticle pigmentation","termid":"GO:0048079"}


id: PBO:0080142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasodilator stimulated phosphoprotein","termid":"PBO:0080142"}


id: PR:Q9C117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- png3 gene.","definition_xrefs":["UniProtKB:Q9C117","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.12c","synonyms":[{"name":"Spom972h-png3","type":"exact"}],"termid":"PR:Q9C117"}


id: PBO:0024478
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-Syndromic X-Linked Intellectual Disability","termid":"PBO:0024478"}


id: PBO:0078438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 4-1","termid":"PBO:0078438"}


id: GO:0008635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process and is mediated by cytochrome c.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mtg_apoptosis","Wikipedia:Caspase","GOC:tb","PMID:14744432"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c (obsolete GO:0008635)","synonyms":[{"name":"activation of caspase activity by cytochrome c","type":"narrow"},{"name":"caspase activation via cytochrome c","type":"exact"}],"termid":"GO:0008635"}


id: GO:0120012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of sphingolipids between membranes in which a sphingolipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).","definition_xrefs":["GOC:krc","PMID:24220498","PMID:25797198","PMID:20823909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"intermembrane sphingolipid transfer","termid":"GO:0120012"}


id: PBO:0031740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mating_type_switching","termid":"PBO:0031740"}


id: GO:0008308
data:
  {"annotated_genes":["SJAG_00048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88707],"is_not":false,"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:vw","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"},{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated monoatomic anion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9012374","GO:0022844"],"synonyms":[{"name":"voltage-dependent ion-selective channel activity","type":"related"},{"name":"voltage-gated anion channel activity","type":"broad"},{"name":"voltage-gated ion-selective channel activity","type":"related"}],"termid":"GO:0008308","terms_by_termid":{"GO:0008308":null}}


id: PBO:0060925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 12","termid":"PBO:0060925"}


id: PBO:0063436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 10","termid":"PBO:0063436"}


id: PBO:0083871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein involved in recycling endocytosed proteins; involved in recycling plasma membrane proteins internalized by endocytosis; localized to sites of polarized growth; direct interaction with C-terminal cytoplasmic region of Drs2p plays an important role for Drs2p function in endocytic recycling pathway; required for turnover of histone H3 variant Cse4p","termid":"PBO:0083871"}


id: PBO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_meiosis_I","termid":"PBO:0034493"}


id: PR:O74399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein BOP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR17605:SF0","PRO:DNx","OMA:SCHPO03387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein erb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.13c","secondary_identifiers":["UniProtKB:O74399"],"synonyms":[{"name":"Spom972h-BOP1","type":"exact"},{"name":"eukaryotic ribosome biogenesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74399"}


id: MONDO:0015654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete idiopathic or cryptogenic familial epilepsy syndrome with identified loci/genes (obsolete MONDO:0015654)","secondary_identifiers":["Orphanet:166475"],"termid":"MONDO:0015654","xrefs":{"Monarch":{"xref_id":"0015654"}}}


id: PBO:0066403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REL proto-oncogene, NF-kB subunit","termid":"PBO:0066403"}


id: GO:1900987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ajmaline.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete ajmaline catabolic process (obsolete GO:1900987)","synonyms":[{"name":"ajmaline breakdown","type":"exact"},{"name":"ajmaline catabolism","type":"exact"},{"name":"ajmaline degradation","type":"exact"}],"termid":"GO:1900987"}


id: PBO:0064721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 57","termid":"PBO:0064721"}


id: MONDO:0010632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the ARX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"West syndrome","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 1","secondary_identifiers":["UMLS:C3463992","MEDGEN:483052","GARD:15298","DOID:0080468","OMIM:308350"],"synonyms":[{"name":"ARX early infantile epileptic encephalopathy","type":"exact"},{"name":"DEE1","type":"exact"},{"name":"EIEE1","type":"exact"},{"name":"Ohtahara syndrome, X-linked","type":"related"},{"name":"West syndrome, X-linked","type":"related"},{"name":"XMESID","type":"related"},{"name":"developmental and epileptic encephalopathy 1, X-linked recessive","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in ARX","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in arx","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 1","type":"exact"},{"name":"infantile epileptic-dyskinetic encephalopathy","type":"related"},{"name":"infantile spasm syndrome, X-linked 1","type":"related"}],"termid":"MONDO:0010632","xrefs":{"Monarch":{"xref_id":"0010632"}}}


id: PBO:0089109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor C, GTPase activating protein Tbc1","termid":"PBO:0089109"}


id: MONDO:0007116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary neurocutaneous angioma is characterized by the association of cerebral and cutaneous angiomatous lesions. It has been described in less than 10 families. Clinical manifestations of the cerebral lesions include epilepsy, cerebral hemorrhage, and focal neurological deficit. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:1062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary neurocutaneous angioma","secondary_identifiers":["icd11.foundation:182579434","GARD:676","MEDGEN:226898","UMLS:C1275084","OMIM:106070"],"synonyms":[{"name":"angioma hereditary neurocutaneous","type":"related"},{"name":"angioma, hereditary neurocutaneous","type":"related"},{"name":"hemangiomatosis, disseminated","type":"related"},{"name":"hereditary neurocutaneous angioma","type":"exact"},{"name":"hereditary neurocutaneous malformation","type":"related"},{"name":"spinal arterial Venous malformations with cutaneous hemangiomas","type":"related"}],"termid":"MONDO:0007116","xrefs":{"Monarch":{"xref_id":"0007116"}}}


id: GO:0033486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of delphinidin 3-O-glucoside, a basic, water-soluble anthocyanin responsible for blue coloration of flowers and fruits.","definition_xrefs":["MetaCyc:PWY-5153","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"delphinidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"delphinidin 3-O-glucoside anabolism","type":"exact"},{"name":"delphinidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"delphinidin 3-O-glucoside formation","type":"exact"},{"name":"delphinidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033486"}


id: PBO:0089737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protease cofactor Nxt3","termid":"PBO:0089737"}


id: PBO:0003882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Gcn20 (predicted)","termid":"PBO:0003882"}


id: GO:0072138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population of the ureteric bud, that contributes to ureteric bud development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in ureteric bud development","synonyms":[{"name":"ureteric bud mesenchymal cell proliferation","type":"broad"}],"termid":"GO:0072138"}


id: SO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The ends of a DNA loop where the two strands of DNA are held in close physical proximity. During interphase the anchors of DNA loops are convergently oriented CTCF binding sites.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"},{"relation_name":"part_of","term_name":"DNA_loop","termid":"SO:0002307"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop_anchor","synonyms":[{"name":"DNA loop anchor","type":"exact"}],"termid":"SO:0002308"}


id: PBO:0084241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of the Anaphase-Promoting Complex/Cyclosome (APC/C); binds to APC/C and inhibits the activity of both APC/C(Cdc20) and APC/C(Cdh1); inhibits the binding of Cdc20 and Cdh1 to APC/C; overexpression results in increased sensitivity to microtubule poison; originally identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; functional homolog of human MAD2L1BP (p31comet)","termid":"PBO:0084241"}


id: GO:0034597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate.","definition_xrefs":["GOC:mah","RHEA:25674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 4-phosphatase activity","termid":"GO:0034596"},{"relation_name":"is_a","term_name":"phosphatidylinositol-4,5-bisphosphate phosphatase activity","termid":"GO:0106019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity","secondary_identifiers":["EC:3.1.3.78","Reactome:R-HSA-6810410"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol-4,5-bisphosphate 4-phosphohydrolase activity","type":"exact"},{"name":"phosphatidyl-myo-inositol-4,5-bisphosphate 4-phosphohydrolase activity","type":"exact"}],"termid":"GO:0034597"}


id: FYPO:0000434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal fermentation","synonyms":[{"name":"fermentative metabolism: normal","type":"related"},{"name":"normal fermentation during mitotic cell cycle","type":"related"},{"name":"normal fermentation during vegetative growth","type":"exact"},{"name":"normal fermentative metabolism","type":"exact"}],"termid":"FYPO:0000434"}


id: PBO:0031465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nigericin","termid":"PBO:0031465"}


