# terms

id: PBO:0011419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_bearer_of","termid":"PBO:0011419"}


id: MONDO:0004776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious anterior uveitis (obsolete MONDO:0004776)","termid":"MONDO:0004776","xrefs":{"Monarch":{"xref_id":"0004776"}}}


id: PATO:0000029
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000029 protein composition (obsolete PATO:0000029)","termid":"PATO:0000029"}


id: MONDO:0017269
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"}]},"cv_name":"mondo","definition":"X-linked form of inherited ichthyosis syndromic form.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked ichthyosis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10048063","GARD:21109","Orphanet:281210"],"synonyms":[{"name":"X-linked inherited ichthyosis syndromic form","type":"exact"},{"name":"inherited ichthyosis syndromic form, X-linked","type":"exact"}],"termid":"MONDO:0017269","terms_by_termid":{"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0017269"}}}


id: GO:0140670
data:
  {"annotated_genes":["SJAG_02606","SJAG_04508"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87084,109697],"is_not":false,"summary":null,"term":"GO:0140670"}]},"cv_name":"molecular_function","definition":"Facilitating a conformational change to unload a cohesin complex from sister chromatids.","definition_xrefs":["PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02606":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"cohesin unloader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cohesin unloading activity","type":"exact"}],"termid":"GO:0140670","terms_by_termid":{"GO:0140670":null}}


id: PBO:0088530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly protein Isu1","termid":"PBO:0088530"}


id: GO:0102009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a dipeptide with proline at the C-terminal = L-proline + a standard alpha amino acid.","definition_xrefs":["EC:3.4.13.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dipeptidase activity","termid":"GO:0016805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"proline dipeptidase activity","secondary_identifiers":["RHEA:76407","MetaCyc:3.4.13.9-RXN"],"termid":"GO:0102009"}


id: MONDO:0034127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"IgA pemphigus","secondary_identifiers":["DOID:0080851","Orphanet:555905","GARD:22242","MEDGEN:697519","UMLS:C1274167"],"termid":"MONDO:0034127","xrefs":{"Monarch":{"xref_id":"0034127"}}}


id: RO:0003307
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the presence of the entity reduces or eliminates some or all aspects of the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_severity_of_condition","termid":"RO:0003305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ameliorates_condition","termid":"RO:0003307"}


id: PBO:0064860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 16A","termid":"PBO:0064860"}


id: PATO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000739 absolute enzyme function value (obsolete PATO:0000739)","termid":"PATO:0000739"}


id: PBO:0059428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardin related transcription factor B","termid":"PBO:0059428"}


id: PBO:0017972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, possible chaperone, regulation of cytoplasmic translation in response to stress (predicted)","termid":"PBO:0017972"}


id: SO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding transcript derived from the transcript of the telomere.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_transcript","synonyms":[{"name":"telomeric transcript","type":"exact"}],"termid":"SO:0001927"}


id: PBO:0113199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the DRG family of GTP-binding proteins; associates with translating ribosomes; interacts with Tma46p, Ygr250cp, Gir2p and Yap1p via two-hybrid; localizes to cytosol and peroxisomes","termid":"PBO:0113199"}


id: PBO:0064558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation protein","termid":"PBO:0064558"}


id: GO:0003229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of ventricular cardiac muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle tissue development","synonyms":[{"name":"ventricular myocardium development","type":"exact"}],"termid":"GO:0003229"}


id: MONDO:0015836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"didelphys uterus","termid":"MONDO:0015834"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bicervical bicornuate uterus with patent cervix and vagina","secondary_identifiers":["GARD:20178","MEDGEN:1842271","icd11.foundation:1145216664","Orphanet:180111","UMLS:C5680491"],"termid":"MONDO:0015836","xrefs":{"Monarch":{"xref_id":"0015836"}}}


id: GO:0085006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via a symbiont-containing vacuole, a specialized sac within the host in which the symbiont resides. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by symbiont secreted substance released from symbiont-containing vacuole (obsolete GO:0085006)","synonyms":[{"name":"interaction with host mediated by symbiont secreted substance released from parasitophorous vacuole","type":"exact"}],"termid":"GO:0085006"}


id: PBO:0090851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex WD repeat protein Elp2","termid":"PBO:0090851"}


id: MONDO:0010537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A X-linked yndrome characterized by intellectual deficit, truncal obesity, characteristic facial features, hypogonadism, tapered fingers and short toes.","definition_xrefs":["Orphanet:127"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyelids malposition disorder (obsolete MONDO:0020158)","termid":"MONDO:0020158"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Borjeson-Forssman-Lehmann syndrome","secondary_identifiers":["NORD:866","SCTID:21634003","MESH:C536575","UMLS:C0265339","ICD9:759.89","DOID:0050681","GARD:936","MEDGEN:78557","OMIM:301900"],"synonyms":[{"name":"BFLS","type":"exact"},{"name":"BORJ","type":"exact"},{"name":"Borjeson syndrome","type":"exact"},{"name":"Borjeson-FORSSMAN-Lehmann syndrome","type":"related"},{"name":"Borjeson-Forssman-Lehmann syndrome","type":"exact"},{"name":"Borjeson-Forssman-Lehmann syndrome, X-linked recessive","type":"exact"},{"name":"Börjeson-Forssman-Lehman Syndrome","type":"exact"},{"name":"MRXSBFL","type":"exact"},{"name":"intellectual deficiency-epilepsy-endocrine disorders syndrome","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Borjeson-Forssman-Lehmann type","type":"related"},{"name":"intellectual disability, epilepsy, and endocrine disorder","type":"exact"},{"name":"intellectual disability, epilepsy, and endocrine disorders","type":"related"},{"name":"intellectual disability-epilepsy-endocrine disorders syndrome","type":"exact"},{"name":"mental deficiency, epilepsy and endocrine disorders","type":"related"},{"name":"mental retardation, X-linked, syndromic, Borjeson-Forssman-Lehmann type","type":"related"},{"name":"mental retardation, epilepsy, and endocrine disorder","type":"exact"},{"name":"mental retardation, epilepsy, and endocrine disorders","type":"related"},{"name":"syndromic X-linked intellectual disability Borjeson-Forssman-Lehmann type","type":"exact"},{"name":"syndromic X-linked mental retardation Borjeson-Forssman-Lehmann type","type":"exact"}],"termid":"MONDO:0010537","xrefs":{"Monarch":{"xref_id":"0010537"}}}


id: GO:0071035
data:
  {"annotated_genes":["SJAG_01818","SJAG_01191","SJAG_04006","SJAG_04818","SJAG_04321","SJAG_03179","SJAG_03745","SJAG_01521","SJAG_04084","SJAG_03984","SJAG_04153","SJAG_00854","SJAG_04824","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87584,91450,92275,95113,96443,101265,103579,104424,105627,106617,112397,114579,115020,117426],"is_not":false,"summary":null,"term":"GO:0071035"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a ribosomal RNA (rRNA) molecule, including RNA fragments released as part of processing the primary transcript into multiple mature rRNA species, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA.","definition_xrefs":["PMID:15935758","PMID:18591258","GOC:krc","GOC:dgf","PMID:15173578","PMID:17652137","PMID:15572680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent rRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0071035","terms_by_termid":{"GO:0071035":null}}


id: PBO:0005366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II Gtb1 (predicted)","termid":"PBO:0005366"}


id: PBO:0065336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl transferase domain containing 1","termid":"PBO:0065336"}


id: PBO:0057669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260b","termid":"PBO:0057669"}


id: PBO:0070068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 25, pseudogene","termid":"PBO:0070068"}


id: PBO:0084243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner nuclear membrane (INM) protein; contains helix-extension-helix (HEH) motif, nuclear localization signal sequence; targeting to the INM requires the Srp1p-Kap95p karyopherins and the Ran cycle; HEH2 has a paralog, SRC1, that arose from the whole genome duplication","termid":"PBO:0084243"}


id: GO:1902279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cholecystokinin signaling pathway that results in positive regulation of pancreatic amylase secretion.","definition_xrefs":["PMID:19028687","GOC:jc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystokinin signaling pathway","termid":"GO:0038188"},{"relation_name":"is_a","term_name":"positive regulation of pancreatic amylase secretion","termid":"GO:1902278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","synonyms":[{"name":"CCK-induced amylase release in pancreatic cell","type":"exact"},{"name":"CCK-mediated pancreatic amylase secretion","type":"exact"},{"name":"CCK-stimulated pancreatic amylase release","type":"exact"},{"name":"activation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"narrow"},{"name":"cholecystokinin-mediated pancreatic amylase secretion","type":"exact"},{"name":"up regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"},{"name":"up-regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"},{"name":"upregulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"}],"termid":"GO:1902279"}


id: PBO:0029306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_G0","termid":"PBO:0029306"}


id: MONDO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland adenoma composed of microfollicular structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular thyroid adenoma","termid":"MONDO:0005032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid gland fetal adenoma","secondary_identifiers":["DOID:8102","ICDO:8333/0","UMLS:C0334328","MEDGEN:137743","NCIT:C4160"],"synonyms":[{"name":"foetal adenoma","type":"related"},{"name":"microfollicular adenoma","type":"exact"},{"name":"microfollicular adenoma (morphologic abnormality)","type":"exact"},{"name":"thyroid fetal adenoma","type":"exact"},{"name":"thyroid foetal adenoma","type":"exact"},{"name":"thyroid gland microfollicular adenoma","type":"exact"}],"termid":"MONDO:0004460","xrefs":{"Monarch":{"xref_id":"0004460"}}}


id: PBO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.19","termid":"PBO:0002335"}


id: PBO:0084214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I; required for the integrity of the active PtdIns-3-kinase complex I by maintaining an association between Vps15p-Vps34p and Atg14p-Vps30p subcomplexes; localizes to the pre-autophagosomal structure (PAS) in an Atg14p-dependent manner; ATG38 is non-essential but is required for macroautophagy","termid":"PBO:0084214"}


id: GO:0015513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of nitrite from one side of the membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate transmembrane transporter activity","termid":"GO:0015112"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"high-affinity secondary active nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite uptake permease activity","type":"exact"}],"termid":"GO:0015513"}


id: MONDO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chylocele of tunica vaginalis","secondary_identifiers":["ICD9:608.84","DOID:10835","MEDGEN:510239","UMLS:C0156315","SCTID:7864001"],"termid":"MONDO:0001136","xrefs":{"Monarch":{"xref_id":"0001136"}}}


id: PBO:0078074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation associated membrane protein 1","termid":"PBO:0078074"}


id: PBO:0050774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histatin 1","termid":"PBO:0050774"}


id: FYPO:0007257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"delayed onset of protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"delayed onset of protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"delayed protein localization to meiotic spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0007257"}


id: GO:0060504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of epithelial cell proliferation that results in the lung bud increasing in size radially.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060501"},{"relation_name":"is_a","term_name":"positive regulation of branching involved in lung morphogenesis","termid":"GO:0061047"},{"relation_name":"positively_regulates","term_name":"epithelial cell proliferation involved in lung bud dilation","termid":"GO:0060505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation involved in lung bud dilation","termid":"GO:0060504"}


id: GO:0047002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinitol + NAD+ = L-ribulose + H+ + NADH.","definition_xrefs":["RHEA:21356","EC:1.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-arabinitol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.13-RXN","KEGG_REACTION:R02441"],"synonyms":[{"name":"L-arabinitol 2-dehydrogenase (ribulose forming) activity","type":"exact"}],"termid":"GO:0047002"}


id: PBO:0047511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 3","termid":"PBO:0047511"}


id: PBO:0081687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 608","termid":"PBO:0081687"}


id: PBO:0043528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coenzyme A synthase","termid":"PBO:0043528"}


id: PBO:0085606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in control of DNA replication; binds Rap1p C-terminus, telomeres, centromeres, replication origins; contributes to resection of DNA double strand breaks (DSBs); acts synergistically with Rif2p to help control telomere length and establish telomeric silencing; in addition to controlling DNA replication initiation, plays ongoing role after initiation and controls events at blocked replication forks","termid":"PBO:0085606"}


id: GO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A small disulfide-containing redox protein that serves as a general protein disulfide oxidoreductase. Interacts with a broad range of proteins by a redox mechanism, based on the reversible oxidation of 2 cysteine thiol groups to a disulfide, accompanied by the transfer of 2 electrons and 2 protons. The net result is the covalent interconversion of a disulfide and a dithiol.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin (obsolete GO:0000008)","synonyms":[{"name":"thioredoxin","type":"exact"}],"termid":"GO:0000008"}


id: PBO:0044893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 5, GATOR1 subcomplex subunit","termid":"PBO:0044893"}


id: MONDO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well circumscribed neoplasm that arises from the breast. Representative examples include apocrine adenoma, tubular adenoma, and pleomorphic adenoma.","definition_xrefs":["NCIT:C40382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast adenoma","secondary_identifiers":["UMLS:C1328385","DOID:1625","MEDGEN:231286"],"synonyms":[{"name":"Ademoma - breast","type":"exact"},{"name":"breast adenoma","type":"exact"}],"termid":"MONDO:0002058","xrefs":{"Monarch":{"xref_id":"0002058"}}}


id: PBO:0058096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4312","termid":"PBO:0058096"}


id: PR:Q9Y813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpr2 gene.","definition_xrefs":["UniProtKB:Q9Y813","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit rpr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.16c","synonyms":[{"name":"RNA-processing protein rpr2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpr2","type":"exact"}],"termid":"PR:Q9Y813"}


id: MONDO:0850267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute megakaryocytic leukemia that is characterized by fusion oncogenes involving transcriptional regulators in childhood.","definition_xrefs":["DOID:0080794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute megakaryoblastic leukemia","termid":"MONDO:0018872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"childhood acute megakaryoblastic leukemia","secondary_identifiers":["UMLS:C0279650","MEDGEN:79023"],"termid":"MONDO:0850267","xrefs":{"Monarch":{"xref_id":"0850267"}}}


id: PBO:0056135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme like 6","termid":"PBO:0056135"}


id: PBO:0005215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid Pmp31","termid":"PBO:0005215"}


id: PBO:0083271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 93% of ORF overlaps the verified gene MDM34; deletion in cyr1 mutant results in loss of stress resistance","termid":"PBO:0083271"}


id: GO:0072742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a SAGA complex is transported to, or maintained in, a specific location in the transcription regulatory region of a gene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"SAGA complex localization to transcription regulatory region","synonyms":[{"name":"SAGA complex localization to promoter","type":"exact"},{"name":"SAGA complex recruitment","type":"exact"}],"termid":"GO:0072742"}


id: MONDO:0007823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete insulin receptors, familial increase 1N (obsolete MONDO:0007823)","secondary_identifiers":["OMIM:147320"],"synonyms":[{"name":"insulin receptors, familial increase IN","type":"related"},{"name":"insulin receptors, familial increase type 1N","type":"exact"}],"termid":"MONDO:0007823","xrefs":{"Monarch":{"xref_id":"0007823"}}}


id: PBO:0085150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside monophosphate and nucleoside diphosphate kinase; functions in the de novo biosynthesis of pyrimidine deoxyribonucleotides; thymidylate/uridylate kinase that converts nucleoside monophosphates, dTMP and dUMP to nucleoside diphosphates, dTDP and dUDP; nucleoside diphosphate kinase that converts nucleoside diphosphates, dTDP and dUDP to dTTP and dUTP; essential for mitotic and meiotic DNA replication; homologous to S. pombe tmp1; human homolog DTYMK can complement the cdc8 null mutant","termid":"PBO:0085150"}


id: PR:O60143
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl701 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.12c","synonyms":[{"name":"Spom972h-rpl701","type":"exact"}],"termid":"PR:O60143"}


id: PBO:0029710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_high_pH","termid":"PBO:0029710"}


id: MOD:02064
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an D-serine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine (Ser)","termid":"MOD:00202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked D-serine residue","synonyms":[{"name":"XlnkDSer","type":"exact"}],"termid":"MOD:02064"}


id: GO:1900156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone trabecula formation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of bone trabecula formation","termid":"GO:1900154"},{"relation_name":"positively_regulates","term_name":"bone trabecula formation","termid":"GO:0060346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone trabecula formation","synonyms":[{"name":"activation of bone trabecula biogenesis","type":"related"},{"name":"activation of bone trabecula formation","type":"narrow"},{"name":"activation of bone trabeculation","type":"narrow"},{"name":"activation of skeletal trabecula biogenesis","type":"related"},{"name":"activation of skeletal trabecula formation","type":"narrow"},{"name":"activation of skeletal trabeculation","type":"narrow"},{"name":"positive regulation of bone trabecula biogenesis","type":"related"},{"name":"positive regulation of bone trabeculation","type":"exact"},{"name":"positive regulation of skeletal trabecula biogenesis","type":"related"},{"name":"positive regulation of skeletal trabecula formation","type":"exact"},{"name":"positive regulation of skeletal trabeculation","type":"exact"},{"name":"up regulation of bone trabecula biogenesis","type":"related"},{"name":"up regulation of bone trabecula formation","type":"exact"},{"name":"up regulation of bone trabeculation","type":"exact"},{"name":"up regulation of skeletal trabecula biogenesis","type":"related"},{"name":"up regulation of skeletal trabecula formation","type":"exact"},{"name":"up regulation of skeletal trabeculation","type":"exact"},{"name":"up-regulation of bone trabecula biogenesis","type":"related"},{"name":"up-regulation of bone trabecula formation","type":"exact"},{"name":"up-regulation of bone trabeculation","type":"exact"},{"name":"up-regulation of skeletal trabecula biogenesis","type":"related"},{"name":"up-regulation of skeletal trabecula formation","type":"exact"},{"name":"up-regulation of skeletal trabeculation","type":"exact"},{"name":"upregulation of bone trabecula biogenesis","type":"related"},{"name":"upregulation of bone trabecula formation","type":"exact"},{"name":"upregulation of bone trabeculation","type":"exact"},{"name":"upregulation of skeletal trabecula biogenesis","type":"related"},{"name":"upregulation of skeletal trabecula formation","type":"exact"},{"name":"upregulation of skeletal trabeculation","type":"exact"}],"termid":"GO:1900156"}


id: MONDO:0004162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyoma arising from the uterine corpus. It is characterized by a dense cellular infiltrate composed of spindle or round cells with scant cytoplasm and a less obvious interlacing fascicle pattern.","definition_xrefs":["NCIT:C40163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular leiomyoma","termid":"MONDO:0003296"},{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus cellular leiomyoma","secondary_identifiers":["DOID:7242","MEDGEN:276938","UMLS:C1519845"],"synonyms":[{"name":"body of uterus cellular leiomyoma","type":"exact"},{"name":"cellular leiomyoma of body of uterus","type":"exact"},{"name":"uterine corpus cellular leiomyoma","type":"exact"}],"termid":"MONDO:0004162","xrefs":{"Monarch":{"xref_id":"0004162"}}}


id: GO:0032338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of inhibin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"inhibin secretion","termid":"GO:0032334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of inhibin secretion","termid":"GO:0032338"}


id: PBO:0086304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with CoA transferase activity; particularly for CoASH transfer from succinyl-CoA to acetate; has minor acetyl-CoA-hydrolase activity; phosphorylated; required for acetate utilization and for diploid pseudohyphal growth","termid":"PBO:0086304"}


id: PBO:0028426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_fluoride","termid":"PBO:0028426"}


id: GO:0006631
data:
  {"annotated_genes":["SJAG_04913","SJAG_02769","SJAG_00305","SJAG_01946","SJAG_04107","SJAG_00902","SJAG_02007","SJAG_02717","SJAG_00947","SJAG_00630","SJAG_00102","SJAG_03909","SJAG_00099","SJAG_03130","SJAG_01396","SJAG_03180","SJAG_03526","SJAG_00221","SJAG_04570","SJAG_03943","SJAG_00734","SJAG_02763","SJAG_04972","SJAG_03972","SJAG_01300","SJAG_03553","SJAG_01402","SJAG_01238","SJAG_03198","SJAG_01356","SJAG_03471","SJAG_02885","SJAG_00706","SJAG_03313","SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91004,92712,100407,100826,107864,114896],"is_not":false,"summary":null,"term":"GO:0006631"},{"annotations":[110974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[90646,87329,97555,96512,94205,101234,111639,96876,99925,97462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[90664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[110464,97398,105045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[88712,91141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[88713,91142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[96362,111821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[99926,103497,96877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[112891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[104755,107517,112551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001676"},{"annotations":[110405],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[96879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[98226],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[113534,69545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[88715,105047,91145,110465,102650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00102":null,"SJAG_00221":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00706":null,"SJAG_00734":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01238":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01396":null,"SJAG_01402":null,"SJAG_01458":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02717":null,"SJAG_02763":null,"SJAG_02769":null,"SJAG_02885":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03471":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03909":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04107":null,"SJAG_04570":null,"SJAG_04913":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fatty_acid_metabolism"],"synonyms":[{"name":"fatty acid metabolism","type":"exact"}],"termid":"GO:0006631","terms_by_termid":{"GO:0001561":null,"GO:0001676":null,"GO:0006631":null,"GO:0006633":null,"GO:0006636":null,"GO:0009062":null,"GO:0009107":null,"GO:0010510":null,"GO:0019367":null,"GO:0030497":null,"GO:0034625":null,"GO:0042758":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: MONDO:0020084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphoproliferative disease associated with primary immune disease (obsolete MONDO:0020084)","secondary_identifiers":["Orphanet:98291"],"termid":"MONDO:0020084","xrefs":{"Monarch":{"xref_id":"0020084"}}}


id: PBO:0046346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 4","termid":"PBO:0046346"}


id: GO:0070330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 O2 + 3 reduced [NADPH--hemoprotein reductase] + testosterone = 17beta-estradiol + formate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase]. Also converts androst-4-ene-3,17-dione into estrone.","definition_xrefs":["EC:1.14.14.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aromatase activity","synonyms":[{"name":"estrogen synthetase activity","type":"narrow"}],"termid":"GO:0070330"}


id: GO:0102507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-4-hydroxybenzoyl-beta-D-glucose = cyanidin 3,7-di-O-beta-D-glucoside betaine + 4-hydroxybenzoic acid + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 7-O-glucosyltransferase (hydroxybenzoly-glucose dependent) activity (obsolete GO:0102507)","termid":"GO:0102507"}


id: GO:1900974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tatiopterin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of tatiopterin metabolic process","termid":"GO:1900977"},{"relation_name":"regulates","term_name":"tatiopterin biosynthetic process","termid":"GO:1900870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0042559","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of tatiopterin biosynthetic process","synonyms":[{"name":"regulation of tatiopterin anabolism","type":"exact"},{"name":"regulation of tatiopterin biosynthesis","type":"exact"},{"name":"regulation of tatiopterin formation","type":"exact"},{"name":"regulation of tatiopterin synthesis","type":"exact"}],"termid":"GO:1900974"}


id: GO:0070708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of a cytidine nucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nucleotide insertion","termid":"GO:0070705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA cytidine insertion","synonyms":[{"name":"RNA C insertion","type":"exact"}],"termid":"GO:0070708"}


id: FYPO:0006811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which large chromosomal rearrangements occur at a normal (i.e. indistinguishable from wild type) frequency. Chromosomal rearrangements may include deletions, duplications, inversions, and translocations.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal gross chromosomal rearrangement frequency","synonyms":[{"name":"normal occurrence of gross chromosomal rearrangement","type":"exact"}],"termid":"FYPO:0006811"}


id: FYPO:0003231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin domains occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at HOODs during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9me at heterochromatin domain during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0003231"}


id: MONDO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acute life-threatening systemic bacterial noncontagious illness caused by exotoxins from bacteria of either the Streptococcus pyogenes or Staphylococcus aureus type. It is characterized by high fever, hypotension, rash, multi-organ dysfunction, and cutaneous desquamation during the early convalescent period. The toxins affect the host immune system, causing an exuberant and pathological host inflammatory response. Laboratory findings include leukocytosis, elevated prothrombin time, hypoalbuminemia, hypocalcemia, and pyuria.","definition_xrefs":["NCIT:C35498","Wikipedia:Toxic_shock_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic shock syndrome","secondary_identifiers":["MESH:D012772","NORD:1782","icd11.foundation:114886962","ICD9:040.82","SCTID:18504008","GARD:9560","ICD10CM:A48.3","MEDGEN:109414","DOID:14115","Orphanet:36234","UMLS:C0600327"],"synonyms":[{"name":"TSS","type":"exact"},{"name":"TSS, toxic shock syndrome","type":"exact"},{"name":"bacterial TSS","type":"exact"},{"name":"bacterial toxic-shock syndrome","type":"exact"},{"name":"shock syndrome (TSS), toxic","type":"exact"},{"name":"staphylococcal toxic shock syndrome","type":"related"},{"name":"syndrome (TSS), toxic shock","type":"exact"},{"name":"toxic shock","type":"exact"},{"name":"toxic shock syndrome","type":"exact"},{"name":"toxic shock syndrome, (TSS)","type":"exact"}],"termid":"MONDO:0001881","xrefs":{"Monarch":{"xref_id":"0001881"}}}


id: MONDO:0008135
data:
  {"annotated_genes":["SJAG_03957"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85004],"is_not":false,"summary":null,"term":"MONDO:0008135"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 13 with retinal and foveal abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1768962","MESH:C563494","OMIM:165510","UMLS:C5435585"],"synonyms":[{"name":"optic atrophy 13 with retinal and foveal abnormalities","type":"exact"},{"name":"optic atrophy with negative Electroretinograms","type":"exact"}],"termid":"MONDO:0008135","terms_by_termid":{"MONDO:0008135":null},"xrefs":{"Monarch":{"xref_id":"0008135"}}}


id: GO:0050846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving teichuronic acid, a polymer containing chains of uronic acids and N-acetylglucosamine found in the cell wall, membrane or capsule of Gram-positive bacteria.","definition_xrefs":["ISBN:0815108893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"teichuronic acid metabolic process","synonyms":[{"name":"teichuronic acid metabolism","type":"exact"}],"termid":"GO:0050846"}


id: PBO:0005273
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein Negative Regulator","termid":"PBO:0005273"}


id: GO:1903937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acrylamide stimulus.","definition_xrefs":["GO_REF:0000071","PMID:16292499","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acrylamide","termid":"GO:1903937"}


id: PBO:0076587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 9B","termid":"PBO:0076587"}


id: RO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A part of relation that applies only between occurents.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"RO:0002418"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurent_part_of","termid":"RO:0002012"}


id: _global:has_quality
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_characteristic","termid":"_global:has_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_quality","secondary_identifiers":["RO:0000086"],"termid":"_global:has_quality"}


id: PBO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-tRNA processing endonuclease tRNAse Z L2 Trz1 (predicted)","termid":"PBO:0000512"}


id: PBO:0075113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 162","termid":"PBO:0075113"}


id: FYPO:0007864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or both poles of the meiotic spindle does not occur during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole during meiosis I","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole during meiosis I","type":"exact"},{"name":"abolished protein localisation to spindle pole during meiosis I","type":"exact"},{"name":"abolished protein localization to meiosis I spindle pole","type":"exact"},{"name":"abolished protein localization to spindle pole during first meiotic nuclear division","type":"exact"},{"name":"protein localization to meiotic spindle pole during meiosis I abolished","type":"exact"}],"termid":"FYPO:0007864"}


id: GO:0047472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(carboxymethyl)-5-oxo-2,5-dihydro-2-furoate = 3-carboxy-cis,cis-muconate + H+.","definition_xrefs":["PMID:17054713","RHEA:23656","PMID:15301541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"3-carboxy-cis,cis-muconate cycloisomerase activity","secondary_identifiers":["MetaCyc:5.5.1.2-RXN","GO:0018842","EC:5.5.1.2","KEGG_REACTION:R03307","UM-BBD_reactionID:r0582"],"synonyms":[{"name":"3-carboxymuconate cycloisomerase type II activity","type":"related"},{"name":"3-carboxymuconate lactonizing enzyme activity","type":"related"},{"name":"3-carboxymuconolactone hydrolase activity","type":"related"},{"name":"CMLE activity","type":"related"},{"name":"beta-carboxymuconate lactonizing enzyme activity","type":"related"}],"termid":"GO:0047472"}


id: GO:0120201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stack of disc membranes located inside a cone photoreceptor outer segment, and containing densely packed molecules of opsin photoreceptor proteins that traverse the lipid bilayer. Cone disc membranes arise as evaginations of the ciliary membrane during the development of the cone outer segment and remain contiguous with the ciliary membrane.","definition_xrefs":["GOC:pde","PMID:26574505","PMID:19501669","PMID:6771304","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary membrane","termid":"GO:0060170"},{"relation_name":"is_a","term_name":"photoreceptor disc membrane","termid":"GO:0097381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cone photoreceptor disc membrane","termid":"GO:0120201"}


id: MONDO:0003734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adult central nervous system teratoma","termid":"MONDO:0003731"},{"relation_name":"is_a","term_name":"central nervous system immature teratoma","termid":"MONDO:0003735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult central nervous system immature teratoma","secondary_identifiers":["MEDGEN:231036","DOID:6018","NCIT:C27401","UMLS:C1332193"],"synonyms":[{"name":"adult central nervous system immature teratoma","type":"exact"}],"termid":"MONDO:0003734","xrefs":{"Monarch":{"xref_id":"0003734"}}}


id: PBO:0051037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family receptor 1","termid":"PBO:0051037"}


id: MONDO:0015087
data:
  {"annotated_genes":["SJAG_01537","SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[85716,85717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"}]},"cv_name":"mondo","definition":"Autosomal dominant form of complex hereditary spastic paraplegia.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_01537":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"autosomal dominant complex spastic paraplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842369","Orphanet:100979","UMLS:C5680379","GARD:19770"],"synonyms":[{"name":"autosomal dominant complex HSP","type":"exact"},{"name":"autosomal dominant complex SPG","type":"exact"},{"name":"autosomal dominant complex hereditary spastic paraplegia","type":"exact"},{"name":"autosomal dominant complicated HSP","type":"exact"},{"name":"autosomal dominant complicated SPG","type":"exact"},{"name":"autosomal dominant complicated spastic paraplegia","type":"exact"},{"name":"complex hereditary spastic paraplegia, autosomal dominant","type":"exact"}],"termid":"MONDO:0015087","terms_by_termid":{"MONDO:0010043":null,"MONDO:0011006":null},"xrefs":{"Monarch":{"xref_id":"0015087"}}}


id: PBO:0043647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 7A","termid":"PBO:0043647"}


id: MOD:01532
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01532"}


id: MONDO:0019506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome is characterized by precocious obesity, congenital hypothyroidism, neonatal colitis, cardiac hypertrophy, craniosynostosis and developmental delay. It has been described in two brothers, one of whom died within the first month of life. The parents of the two children were nonconsanguineous and in good health, however, the pregnancies were complicated by a maternal HELLP syndrome (Haemolysis, Elevated Liver enzymes and Low Platelets). The mode of inheritance has not yet been clearly established.","definition_xrefs":["Orphanet:88643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome","secondary_identifiers":["MEDGEN:928548","GARD:19092","UMLS:C4302879","SCTID:722051004"],"termid":"MONDO:0019506","xrefs":{"Monarch":{"xref_id":"0019506"}}}


id: PBO:0039774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7","termid":"PBO:0039774"}


id: PBO:0108708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 chaperone, CENP-A recruiting complex CENP-A chaperone Mis16","termid":"PBO:0108708"}


id: FYPO:0006214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of spore germination is decreased when germination takes place under conditions of copper ion starvation.","definition_xrefs":["PMID:28572514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased spore germination frequency","termid":"FYPO:0000581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased spore germination frequency during copper ion starvation","synonyms":[{"name":"decreased spore germination during copper ion starvation","type":"exact"},{"name":"decreased spore germination frequency during cellular response to copper ion starvation","type":"exact"},{"name":"decreased spore germination frequency during copper starvation","type":"exact"},{"name":"decreased spore viability during copper ion starvation","type":"related"},{"name":"reduced spore germination frequency during copper ion starvation","type":"exact"},{"name":"reduced spore viability during copper ion starvation","type":"related"}],"termid":"FYPO:0006214"}


id: PBO:0063464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor beta","termid":"PBO:0063464"}


id: PBO:0073857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A6","termid":"PBO:0073857"}


id: GO:0090124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to N-4 of cytosine in a DNA molecule.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete N-4 methylation of cytosine (obsolete GO:0090124)","termid":"GO:0090124"}


id: GO:0070337
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98558],"is_not":false,"summary":null,"term":"GO:0070337"}]},"cv_name":"molecular_function","definition":"Binding to a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.","definition_xrefs":["PMID:15189154","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flap-structured DNA binding","termid":"GO:0070336"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"3'-flap-structured DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070337","terms_by_termid":{"GO:0070337":null}}


id: GO:0002833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a response to biotic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to biotic stimulus","synonyms":[{"name":"activation of response to biotic stimulus","type":"narrow"},{"name":"stimulation of response to biotic stimulus","type":"narrow"},{"name":"up regulation of response to biotic stimulus","type":"exact"},{"name":"up-regulation of response to biotic stimulus","type":"exact"},{"name":"upregulation of response to biotic stimulus","type":"exact"}],"termid":"GO:0002833"}


id: FYPO:0000994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphatidylinositol-4-phosphate level","termid":"FYPO:0001015"},{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-4-phosphate level","synonyms":[{"name":"increased PI-4-P accumulation","type":"related"},{"name":"increased cellular PI(4)P level","type":"exact"},{"name":"increased cellular PI-4-P level","type":"exact"},{"name":"increased cellular phosphatidylinositol-4-phosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylinositol-4-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0000994"}


id: PBO:0004701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3B (predicted)","termid":"PBO:0004701"}


id: GO:0103006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (9R,10S)-dihydroxystearate + O2 + NADPH = 9,10,18-trihydroxystearate + H2O + NADP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"9,10-dihydroxystearate hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9807"],"termid":"GO:0103006"}


id: PBO:0070434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPGR interacting protein 1","termid":"PBO:0070434"}


id: PBO:0088719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent RNA helicase Mrh5","termid":"PBO:0088719"}


id: PBO:0079002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 2-1","termid":"PBO:0079002"}


id: GO:0090633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + KDN = diphosphate + CMP-KDN.","definition_xrefs":["PMID:11479279","PMID:8381411","ISBN:978-1-60805-067-3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"keto-deoxynonulosonic acid (KDN) cytidylyltransferase activity","synonyms":[{"name":"CMP-KDN synthetase activity","type":"exact"},{"name":"cytidine 5'-monophospho-2-Keto-3-deoxy-D-glycero-D-galacto-nononic acid synthetase activity","type":"exact"}],"termid":"GO:0090633"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0140096","GO:0004672","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: PBO:0036252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl phosphate reductase Pro1","termid":"PBO:0036252"}


id: PBO:0035789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_highly_transcribed_RNA_polymerase_II_genes","termid":"PBO:0035789"}


id: GO:0046460
data:
  {"annotated_genes":["SJAG_03609","SJAG_02763","SJAG_03162","SJAG_04041"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90667,113320,89239,111204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of neutral lipids, lipids only soluble in solvents of very low polarity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid metabolic process","termid":"GO:0006638"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"neutral lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"neutral lipid anabolism","type":"exact"},{"name":"neutral lipid biosynthesis","type":"exact"},{"name":"neutral lipid formation","type":"exact"},{"name":"neutral lipid synthesis","type":"exact"}],"termid":"GO:0046460","terms_by_termid":{"GO:0019432":null}}


id: PBO:0056579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple C2 and transmembrane domain containing 2","termid":"PBO:0056579"}


id: PBO:0074431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 31","termid":"PBO:0074431"}


id: PBO:0060666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDC80 kinetochore complex component","termid":"PBO:0060666"}


id: MONDO:0006297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma that arises from the maxillary sinus. It usually has an aggressive clinical course.","definition_xrefs":["NCIT:C6239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maxillary sinus carcinoma","termid":"MONDO:0001748"},{"relation_name":"is_a","term_name":"paranasal sinus adenoid cystic carcinoma","termid":"MONDO:0006352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"maxillary sinus adenoid cystic carcinoma","secondary_identifiers":["UMLS:C1334643","MEDGEN:233168","DOID:7198","EFO:1000365"],"synonyms":[{"name":"adenoid cystic carcinoma of maxillary sinus","type":"related"},{"name":"adenoid cystic carcinoma of the maxillary sinus","type":"exact"},{"name":"maxillary sinus adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006297","xrefs":{"Monarch":{"xref_id":"0006297"}}}


id: SOFP:element
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"name of transposable element class","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"element","termid":"SOFP:element"}


id: GO:0019551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate catabolic process to 2-oxoglutarate (obsolete GO:0019551)","synonyms":[{"name":"glutamate breakdown to 2-oxoglutarate","type":"exact"},{"name":"glutamate catabolic process to 2-ketoglutarate","type":"exact"},{"name":"glutamate catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"glutamate catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"glutamate catabolism to 2-ketoglutarate","type":"exact"},{"name":"glutamate catabolism to alpha-ketoglutarate","type":"exact"},{"name":"glutamate catabolism to alpha-oxoglutarate","type":"exact"},{"name":"glutamate degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019551"}


id: MOD:00995
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to (81)Br-L-2'-bromophenylalanine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2'-bromophenylalanine","termid":"MOD:00183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(81)Br labeled 2'-bromophenylalanine","termid":"MOD:00995"}


id: MONDO:0022639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cantu Sanchez-Corona Garcia-Cruz syndrome","termid":"MONDO:0022639","xrefs":{"Monarch":{"xref_id":"0022639"}}}


id: PBO:0073817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 18","termid":"PBO:0073817"}


id: PBO:0054758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2169","termid":"PBO:0054758"}


id: PBO:0028610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_urease_activity","termid":"PBO:0028610"}


id: PBO:0110195
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approval_in_progress_timestamp","termid":"PBO:0110195"}


id: GO:0047770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + acceptor + H2O = a carboxylate + reduced acceptor.","definition_xrefs":["MetaCyc:CARBOXYLATE-REDUCTASE-RXN","EC:1.2.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carboxylate reductase activity","synonyms":[{"name":"aldehyde:(acceptor) oxidoreductase activity","type":"related"},{"name":"aldehyde:acceptor oxidoreductase activity","type":"related"},{"name":"carboxylic acid reductase activity","type":"related"}],"termid":"GO:0047770"}


id: PBO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CSL","termid":"PBO:0001773"}


id: PBO:0040452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP11A antisense RNA 1","termid":"PBO:0040452"}


id: FYPO:0002044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished premeiotic DNA replication","synonyms":[{"name":"absent premeiotic DNA replication","type":"exact"},{"name":"premeiotic DNA replication abolished","type":"exact"}],"termid":"FYPO:0002044"}


id: MONDO:1011600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 diabetes mellitus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, domestic cat","termid":"MONDO:1010575"},{"relation_name":"is_a","term_name":"type 1 diabetes mellitus, non-human animal","termid":"MONDO:1011401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus, domestic cat","secondary_identifiers":["OMIA:000283-9685"],"termid":"MONDO:1011600","xrefs":{"Monarch":{"xref_id":"1011600"}}}


id: FYPO:0000345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of protein from the nucleus is abnormal. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"},{"relation_name":"is_a","term_name":"abnormal protein export from nucleus","termid":"FYPO:0005745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein export from nucleus during vegetative growth","synonyms":[{"name":"abnormal protein export from nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000345"}


id: PBO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 homolog, RNA polymerase I transcription factor","termid":"PBO:0072577"}


id: MONDO:0000591
data:
  {"annotated_genes":["SJAG_03077","SJAG_02131","SJAG_03703","SJAG_01671","SJAG_MIT15","SJAG_00228","SJAG_03453","SJAG_02431","SJAG_02536","SJAG_03824","SJAG_MIT03","SJAG_MIT13","SJAG_02923","SJAG_01322","SJAG_03815","SJAG_01209","SJAG_00547","SJAG_01181","SJAG_02785","SJAG_01754","SJAG_02342","SJAG_02919","SJAG_01139","SJAG_04231","SJAG_03126","SJAG_00930","SJAG_01240","SJAG_03145","SJAG_01665","SJAG_04567","SJAG_04621","SJAG_02611","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[84252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[84254,84253,84255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[84258,84259,84260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[85497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032592"},{"annotations":[85780,85779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030300"},{"annotations":[84781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859358"},{"annotations":[85597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957545"},{"annotations":[85564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030330"},{"annotations":[84922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[85109,85108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[84415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[85417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012808"},{"annotations":[85688,85687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013198"},{"annotations":[86263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013339"},{"annotations":[84375,84374,84373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014073"},{"annotations":[85397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[85398,85399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"},{"annotations":[84913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012556"},{"annotations":[84454,84455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"},{"annotations":[84393,84394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008647"},{"annotations":[85675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012112"},{"annotations":[85437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012799"},{"annotations":[85685,85684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013197"},{"annotations":[84568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[85680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012111"},{"annotations":[84774,84773,84775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[86485,86483,86484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[85002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[85873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[85670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[84740,84739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"},{"annotations":[86418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013968"}]},"cv_name":"mondo","definition":"A cardiomyopathy that is due to abnormalities in heart muscle cells.","definition_xrefs":["Wikipedia:Cardiomyopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00547":null,"SJAG_00930":null,"SJAG_00993":null,"SJAG_01139":null,"SJAG_01181":null,"SJAG_01209":null,"SJAG_01240":null,"SJAG_01322":null,"SJAG_01665":null,"SJAG_01671":null,"SJAG_01754":null,"SJAG_02131":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02536":null,"SJAG_02611":null,"SJAG_02785":null,"SJAG_02919":null,"SJAG_02923":null,"SJAG_03077":null,"SJAG_03126":null,"SJAG_03145":null,"SJAG_03453":null,"SJAG_03703":null,"SJAG_03815":null,"SJAG_03824":null,"SJAG_04231":null,"SJAG_04567":null,"SJAG_04621":null,"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"intrinsic cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060036"],"synonyms":[{"name":"intrinsic cardiomyopathy","type":"exact"},{"name":"primary cardiomyopathy","type":"exact"}],"termid":"MONDO:0000591","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008409":null,"MONDO:0008647":null,"MONDO:0009026":null,"MONDO:0009290":null,"MONDO:0010788":null,"MONDO:0010946":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012556":null,"MONDO:0012557":null,"MONDO:0012799":null,"MONDO:0012808":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0013198":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013339":null,"MONDO:0013968":null,"MONDO:0014073":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0030300":null,"MONDO:0030330":null,"MONDO:0032592":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:0859358":null,"MONDO:0957545":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0000591"}}}


id: MONDO:0002189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm arising from the sweat glands. It presents as a nodular lesion usually in the scalp, trunk, and proximal extremities. It is characterized by a nodular growth pattern. Complete excision is curative.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hidradenoma","termid":"MONDO:0002805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nodular hidradenoma","secondary_identifiers":["ICDO:8402/0","NCIT:C7568","UMLS:C4505470","DOID:2061","MEDGEN:1374260","SCTID:253020008"],"synonyms":[{"name":"eccrine nodular hidradenoma","type":"related"},{"name":"nodular hidradenoma","type":"exact"},{"name":"solid and cystic hidradenoma","type":"exact"}],"termid":"MONDO:0002189","xrefs":{"Monarch":{"xref_id":"0002189"}}}


id: PR:O94406
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04959","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.14","secondary_identifiers":["UniProtKB:O94406"],"synonyms":[{"name":"Spom972h-PRPF18","type":"exact"}],"termid":"PR:O94406"}


id: GO:1990020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Axon collateral that ramifies in the area of the soma of the cell of origin.","definition_xrefs":["NIF_Subcellular:sao1642494436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon collateral","termid":"GO:0044303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"recurrent axon collateral","synonyms":[{"name":"recurrent collateral","type":"broad"}],"termid":"GO:1990020"}


id: PBO:0074654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 41B","termid":"PBO:0074654"}


id: GO:0160025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sensory perception which causes the desire or reflex to scratch.","definition_xrefs":["PMID:29723501","PMID:26015312","Wikipedia:Itch","PMID:30734045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of itch","synonyms":[{"name":"pruritus","type":"exact"}],"termid":"GO:0160025"}


id: GO:0097735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A section of the Actinobacterium-type cell wall composed of (phenyl)phthiocerol, phthiodiolone, phthiotriol dimycocerosate, diphthioceranate and other compounds.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Gram-positive-bacterium-type cell wall","termid":"GO:0009275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"DIM/DIP cell wall layer","termid":"GO:0097735"}


id: SO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant is a non exact copy of a sequence_feature or genome exhibiting one or more sequence_alteration.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000109 sequence_variant_obs (obsolete SO:0000109)","synonyms":[{"name":"mutation","type":"related"}],"termid":"SO:0000109"}


id: MONDO:0015715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe hemophilia B is a form of hemophilia B characterized by a large deficiency of factor IX leading to frequent spontaneous hemorrhage and abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B","termid":"MONDO:0010604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"severe hemophilia B","secondary_identifiers":["GARD:17056","MEDGEN:1826004","UMLS:C5679576"],"synonyms":[{"name":"severe factor IX deficiency","type":"exact"},{"name":"severe haemophilia type B","type":"exact"},{"name":"severe hemophilia type B","type":"exact"}],"termid":"MONDO:0015715","xrefs":{"Monarch":{"xref_id":"0015715"}}}


id: GO:1990771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clathrin-mediated endocytosis of an extracellular exosome.","definition_xrefs":["PMID:24951588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"is_a","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"clathrin-dependent extracellular exosome endocytosis","synonyms":[{"name":"clathrin-mediated extracellular exosome endocytosis","type":"exact"},{"name":"exosome related","type":"exact"}],"termid":"GO:1990771"}


id: FYPO:0000014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"tapered cell","synonyms":[{"name":"bottle-shaped cell","type":"exact"},{"name":"cell morphology, bottle/skittle","type":"exact"},{"name":"skittle-shaped cell","type":"exact"}],"termid":"FYPO:0000014"}


id: MONDO:1011545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunoglobulin A glomerulonephropathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis, dog","termid":"MONDO:1011043"},{"relation_name":"is_a","term_name":"immunoglobulin A glomerulonephropathy, non-human animal","termid":"MONDO:1011449"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin A glomerulonephropathy, dog","secondary_identifiers":["OMIA:000553-9615"],"termid":"MONDO:1011545","xrefs":{"Monarch":{"xref_id":"1011545"}}}


id: MONDO:0009965
data:
  {"annotated_genes":["SJAG_03876","SJAG_03132","SJAG_01822"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84420,84421,84422],"is_not":false,"summary":null,"term":"MONDO:0009965"}]},"cv_name":"mondo","definition":"Perlman syndrome is characterized principally by polyhydramnios, neonatal macrosomia, bilateral renal tumors (hamartomas with or without nephroblastomatosis), hypertrophy of the islets of Langerhans and facial dysmorphism.","definition_xrefs":["Orphanet:2849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01822":null,"SJAG_03132":null,"SJAG_03876":null},"genotype_count":0,"is_obsolete":false,"name":"Perlman syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:162909","GARD:3936","icd11.foundation:795682441","NCIT:C103144","SCTID:722231005","DOID:0060476","OMIM:267000","MESH:C536399","UMLS:C0796113"],"synonyms":[{"name":"PRLMNS","type":"related"},{"name":"Perlman syndrome","type":"exact"},{"name":"nephroblastomatosis - fetal ascites - macrosomia - Wilms tumor","type":"exact"},{"name":"nephroblastomatosis - foetal ascites - macrosomia - Wilms tumour","type":"exact"},{"name":"nephroblastomatosis fetal ascites macrosomia and Wilms tumor","type":"related"},{"name":"nephroblastomatosis foetal ascites macrosomia and Wilms tumour","type":"related"},{"name":"nephroblastomatosis, fetal ascites, macrosomia and Wilms tumor","type":"exact"},{"name":"nephroblastomatosis, fetal ascites, macrosomia, and Wilms tumor","type":"related"},{"name":"nephroblastomatosis, foetal ascites, macrosomia and Wilms tumour","type":"exact"},{"name":"nephroblastomatosis, foetal ascites, macrosomia, and Wilms tumour","type":"related"},{"name":"nephroblastomatosis-fetal ascites-macrosomia-Wilms tumor syndrome","type":"exact"},{"name":"nephroblastomatosis-fetal ascites-macrosomia-Wilms tumour syndrome","type":"exact"},{"name":"renal hamartomas, nephroblastomatosis and fetal gigantism","type":"exact"},{"name":"renal hamartomas, nephroblastomatosis and foetal gigantism","type":"exact"},{"name":"renal hamartomas, nephroblastomatosis, and fetal gigantism","type":"related"},{"name":"renal hamartomas, nephroblastomatosis, and foetal gigantism","type":"related"}],"termid":"MONDO:0009965","terms_by_termid":{"MONDO:0009965":null},"xrefs":{"Monarch":{"xref_id":"0009965"}}}


id: PBO:0042109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 182","termid":"PBO:0042109"}


id: PBO:0028726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_actin_filament_polymerization_at_cell_tip","termid":"PBO:0028726"}


id: PBO:0075776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 5","termid":"PBO:0075776"}


id: MONDO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymoma type AB (obsolete MONDO:0002589)","termid":"MONDO:0002589","xrefs":{"Monarch":{"xref_id":"0002589"}}}


id: PBO:0080854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS2 antisense RNA 1","termid":"PBO:0080854"}


id: GO:2001167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2B ubiquitination.","definition_xrefs":["PMID:12876293"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2B ubiquitination (obsolete GO:2001167)","termid":"GO:2001167"}


id: GO:0008291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["ISBN:0192800752","GOC:nln","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine metabolic process","synonyms":[{"name":"acetylcholine metabolism","type":"exact"}],"termid":"GO:0008291"}


id: GO:1902610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a N-phenylthiourea stimulus.","definition_xrefs":["GOC:rjd","GOC:TermGenie","PMID:24006265","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to N-phenylthiourea","termid":"GO:1902610"}


id: PBO:0064182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XI, pseudogene","termid":"PBO:0064182"}


id: PBO:0044026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 subunit alpha' interacting protein","termid":"PBO:0044026"}


id: PBO:0091721
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure update","termid":"PBO:0091721"}


id: MOD:01432
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S,4S)-4,5-dihydroxyleucine.","definition_xrefs":["ChEBI:141819","PubMed:3718926","RESID:AA0446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated leucine","termid":"MOD:01412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4S)-4,5-dihydroxyleucine","synonyms":[{"name":"(2S,4S)-2-amino-4,5-dihydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S,4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"(4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"MOD_RES (4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"gamma,delta-dihydroxyleucine","type":"exact"}],"termid":"MOD:01432"}


id: PBO:0058305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4679-1","termid":"PBO:0058305"}


id: GO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lymphoid progenitor cell becomes committed to become any type of B cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell lineage commitment","synonyms":[{"name":"B lymphocyte lineage commitment","type":"exact"},{"name":"B-cell lineage commitment","type":"exact"},{"name":"B-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002326"}


id: PBO:0062435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 99 pseudogene","termid":"PBO:0062435"}


id: GO:0043971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 18 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K18 acetylation (obsolete GO:0043971)","synonyms":[{"name":"histone H3 acetylation at K18","type":"exact"},{"name":"histone H3K18 acetylation","type":"exact"}],"termid":"GO:0043971"}


id: PBO:0058667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6795","termid":"PBO:0058667"}


id: GO:0045733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"acetate catabolic process","secondary_identifiers":["GO:0019663"],"synonyms":[{"name":"acetate breakdown","type":"exact"},{"name":"acetate catabolism","type":"exact"},{"name":"acetate degradation","type":"exact"},{"name":"homoacetate catabolic process","type":"related"}],"termid":"GO:0045733"}


id: MONDO:0001273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal dilation of the colon not due to obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacolon","secondary_identifiers":["DOID:11372","SCTID:33995003","UMLS:C0025160","NCIT:C34810","icd11.foundation:1742998538","MEDGEN:6285","ICD9:564.7","MESH:D008531"],"synonyms":[{"name":"dilatation of colon","type":"exact"}],"termid":"MONDO:0001273","xrefs":{"Monarch":{"xref_id":"0001273"}}}


id: PBO:0053832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1097","termid":"PBO:0053832"}


id: PBO:0005111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin","termid":"PBO:0005111"}


id: PBO:0090897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit, ubiquitin-protein ligase E4 Prp19","termid":"PBO:0090897"}


id: GO:0034353
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90900],"is_not":false,"summary":null,"term":"GO:0034353"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a 5' terminal diphosphate from the 5'-triphosphate end of an mRNA, leaving a 5'-monophosphate end.","definition_xrefs":["PMID:17612492","PMID:18202662","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016787"],"is_obsolete":false,"name":"mRNA 5'-diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA pyrophosphohydrolase activity","type":"broad"}],"termid":"GO:0034353","terms_by_termid":{"GO:0034353":null}}


id: GO:0018727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-phenanthrol + X-SO3(-) = HX + 2-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-phenanthrol sulfotransferase activity (obsolete GO:0018727)","synonyms":[{"name":"2-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018727"}


id: PBO:0059176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 2 receptor accessory protein 2","termid":"PBO:0059176"}


id: GO:0061305
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102880],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"The maintenance of established bipolar anisotropic intracellular organization or cell growth patterns that results in the shaping of a cell.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061305","terms_by_termid":{"GO:0061361":null}}


id: PBO:0050247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 25","termid":"PBO:0050247"}


id: GO:0103002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-hydroxypalmitate + NADP = H+ + 16-oxo-palmitate + NADPH.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"16-hydroxypalmitate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-9802"],"termid":"GO:0103002"}


id: GO:0005304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-valine from one side of a membrane to the other. L-valine is 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-valine transmembrane transporter activity","synonyms":[{"name":"L-valine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"},{"name":"valine/tyrosine/tryptophan permease activity","type":"narrow"}],"termid":"GO:0005304"}


id: GO:0072188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the metanephric cap acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system pattern specification","termid":"GO:0072048"},{"relation_name":"is_a","term_name":"metanephric cap formation","termid":"GO:0072187"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap specification","termid":"GO:0072188"}


id: GO:1901208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heart looping.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart looping","termid":"GO:1901207"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"heart looping","termid":"GO:0001947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart looping","synonyms":[{"name":"down regulation of cardiac looping","type":"exact"},{"name":"down regulation of heart looping","type":"exact"},{"name":"down-regulation of cardiac looping","type":"exact"},{"name":"down-regulation of heart looping","type":"exact"},{"name":"downregulation of cardiac looping","type":"exact"},{"name":"downregulation of heart looping","type":"exact"},{"name":"inhibition of cardiac looping","type":"exact"},{"name":"inhibition of heart looping","type":"narrow"},{"name":"negative regulation of cardiac looping","type":"exact"}],"termid":"GO:1901208"}


id: GO:0047246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: luteolin 7-O-beta-D-glucosiduronate + UDP-alpha-D-glucuronate = H+ + luteolin 7-O-[(beta-D-glucosiduronate)-(1->2)-(beta-D-glucosiduronate)] + UDP.","definition_xrefs":["EC:2.4.1.190","RHEA:14149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"luteolin-7-O-glucuronide 7-O-glucuronosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06827","MetaCyc:2.4.1.190-RXN"],"synonyms":[{"name":"LMT activity","type":"related"},{"name":"UDP-glucuronate:luteolin 7-O-glucuronide-glucuronosyltransferase activity","type":"related"},{"name":"UDP-glucuronate:luteolin-7-O-beta-D-glucuronide 2''-O-glucuronosyltransferase activity","type":"related"},{"name":"luteolin-7-O-glucuronide 2''-O-glucuronosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronate-luteolin 7-O-glucuronide glucuronosyltransferase activity","type":"related"}],"termid":"GO:0047246"}


id: GO:1901314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A K63-linked ubiquitination (obsolete GO:1901314)","termid":"GO:1901314"}


id: PR:Q9UU88
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylate kinase isoenzyme 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12595:SF0","OMA:SCHPO04983","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase isoenzyme 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.11c","secondary_identifiers":["UniProtKB:Q9UU88"],"synonyms":[{"name":"AK/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AK6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AK6","type":"exact"},{"name":"dual activity adenylate kinase/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU88"}


id: PBO:0087710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein abundance increases in response to DNA replication stress","termid":"PBO:0087710"}


id: GO:0072496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of Pup from one protein to another via the reaction X-Pup + Y = Y-Pup + X, where both X-Pup and Y-Pup are covalent linkages.","definition_xrefs":["GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0019787","GO:0016740","GO:0003674","GO:0016746","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"Pup transferase activity","synonyms":[{"name":"Pup conjugating enzyme activity","type":"narrow"}],"termid":"GO:0072496"}


id: PBO:0068468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 45, pseudogene","termid":"PBO:0068468"}


id: PBO:0044035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 4 Y-linked","termid":"PBO:0044035"}


id: MONDO:0700207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient state of hypogonadotropic hypogonadism associated with prolongation of childhood phase of growth, delayed skeletal maturation, delayed and attenuated pubertal growth spurt, and relatively low insulin-like growth factor-1 secretion.","definition_xrefs":["PMID:23087852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutional delay of growth and puberty","secondary_identifiers":["UMLS:C0342538","icd11.foundation:1683573263","MEDGEN:575091","SCTID:237813007"],"termid":"MONDO:0700207","xrefs":{"Monarch":{"xref_id":"0700207"}}}


id: PBO:0057330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520e","termid":"PBO:0057330"}


id: PBO:0070816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 46","termid":"PBO:0070816"}


id: MONDO:0010673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifier, X-linked, for Neurofunctional defects","secondary_identifiers":["MEDGEN:326945","MESH:C564098","OMIM:309840","UMLS:C1839708"],"synonyms":[{"name":"Tourette syndrome, modifier of","type":"related"},{"name":"modifier, X-linked, for Neurofunctional defects","type":"exact"}],"termid":"MONDO:0010673","xrefs":{"Monarch":{"xref_id":"0010673"}}}


id: MONDO:0957454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare form of composite dysraphism characterized by the presence of a split cord malformation and a myelomeningocele on one of the two hemicords. Hemicords can be in a single dural sac or in two separated dural sacs. Other spinal cord malformations can be associated. Due to the comparable prognosis it is considered as a subtype of myelomeningocele.","definition_xrefs":["Orphanet:645388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelomeningocele","termid":"MONDO:0019773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"hemi-myelomeningocele","secondary_identifiers":["UMLS:C5816710","MEDGEN:1843407"],"termid":"MONDO:0957454","xrefs":{"Monarch":{"xref_id":"0957454"}}}


id: GO:0102350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexacosanoyl-CoA(4-) + NADP(3-) = trans-2-hexacosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-cerot-2-enoyl-CoA reductase activity (obsolete GO:0102350)","termid":"GO:0102350"}


id: PBO:0004235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase complex subunit H (predicted)","termid":"PBO:0004235"}


id: PBO:0058234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4523","termid":"PBO:0058234"}


id: GO:0042835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BRE RNA element (Bruno response element).","definition_xrefs":["PMID:10893231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BRE binding","termid":"GO:0042835"}


id: PBO:0068392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 212B","termid":"PBO:0068392"}


id: PBO:0084516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm Y57G7A.10/EMC-2, fly CG17556, human TTC35","termid":"PBO:0084516"}


id: PBO:0070675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 46","termid":"PBO:0070675"}


id: PBO:0046266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4","termid":"PBO:0046266"}


id: PBO:0001035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human 4F5S homolog","termid":"PBO:0001035"}


id: GO:0034775
data:
  {"annotated_genes":["SJAG_01344","SJAG_01660","SJAG_05213","SJAG_03497","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94721],"is_not":false,"summary":null,"term":"GO:0034775"},{"annotations":[94720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[112269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[117327,95266,96247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"}]},"cv_name":"biological_process","definition":"A process in which glutathione is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione transport","termid":"GO:0034635"},{"relation_name":"is_a","term_name":"tripeptide transmembrane transport","termid":"GO:0035443"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"glutathione transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione membrane transport","type":"exact"},{"name":"transmembrane glutathione transport","type":"exact"}],"termid":"GO:0034775","terms_by_termid":{"GO:0034775":null,"GO:0071996":null,"GO:0098709":null,"GO:0160007":null}}


id: PBO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 183 pseudogene","termid":"PBO:0070243"}


id: GO:0075242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of zoospore formation, a process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zoospore formation","termid":"GO:0075240"},{"relation_name":"is_a","term_name":"negative regulation of sporangiospore formation","termid":"GO:0075288"},{"relation_name":"negatively_regulates","term_name":"zoospore formation","termid":"GO:0075239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of zoospore formation","termid":"GO:0075242"}


id: PBO:0083190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized ORF YLL066C","termid":"PBO:0083190"}


id: PBO:0083012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; associated with topoisomerase II; binds to mRNAs under glucose starvation, most often in the 3' UTR; functionally linked to Pab1p; forms cytoplasmic foci upon DNA replication stress; phosphorylation by PKA inhibits P body foci formation","termid":"PBO:0083012"}


id: MONDO:0026157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic pigmentation anomaly of the skin (obsolete MONDO:0026157)","secondary_identifiers":["Orphanet:183463"],"termid":"MONDO:0026157","xrefs":{"Monarch":{"xref_id":"0026157"}}}


id: MONDO:0012458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 5","secondary_identifiers":["MEDGEN:339933","UMLS:C1853227","OMIM:610261"],"synonyms":[{"name":"Hyt5","type":"related"},{"name":"hypertension, essential, body Mass-related","type":"related"},{"name":"hypertension, essential, susceptibility to, 5","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 5","type":"exact"}],"termid":"MONDO:0012458","xrefs":{"Monarch":{"xref_id":"0012458"}}}


id: MONDO:0014160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-severe combined immunodeficiency disorder manifesting with recurrent respiratory infections, candidiasis, diarrhea, and failure to thrive. Patients show a clear predisposition to herpes viral infections, and features of immune dysregulation, including hypereosinophilia, vitiligo, and alopecia areata. Other features include lymphadenopathy and hepatosplenomegaly. CD3+ T-cells express TCR- gamma|delta, but little or no TCR-alpha|beta.","definition_xrefs":["OMIM:615387","DOID:0111977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"TCR-alpha-beta-positive T-cell deficiency","secondary_identifiers":["GARD:17646","UMLS:C3809332","MEDGEN:815662","Orphanet:397959"],"synonyms":[{"name":"IMD7","type":"exact"},{"name":"T-cell receptor-ALPHA/BETA deficiency","type":"related"},{"name":"TCR-Alpha/Beta deficiency","type":"related"},{"name":"TCR-alpha-beta+ T-cell deficiency","type":"exact"},{"name":"immunodeficiency 7","type":"related"},{"name":"immunodeficiency 7, TCR-alpha/beta deficient","type":"exact"}],"termid":"MONDO:0014160","xrefs":{"Monarch":{"xref_id":"0014160"}}}


id: GO:0070049
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains endobrevin (VAMP8), SNAP-25, and syntaxin 2 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"endobrevin-SNAP-25-syntaxin-2 complex","synonyms":[{"name":"SNARE complex (Stx2, Snap25, Vamp8)","type":"narrow"},{"name":"Stx2-Snap25-Vamp8 complex","type":"narrow"}],"termid":"GO:0070049"}


id: PBO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 22 pseudogene","termid":"PBO:0042647"}


id: PBO:0081546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 462","termid":"PBO:0081546"}


id: MONDO:0043195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rubinstein Taybi like syndrome","secondary_identifiers":["MEDGEN:418972","MESH:C535877","UMLS:C2931052","OMIM:180850"],"synonyms":[{"name":"Broad terminal phalanges of the thumbs and great toes, antimongoloid slant of the palpebral fissures, and characteristic beaked noses","type":"related"}],"termid":"MONDO:0043195","xrefs":{"Monarch":{"xref_id":"0043195"}}}


id: PBO:0076467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1","termid":"PBO:0076467"}


id: PBO:0047747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 11","termid":"PBO:0047747"}


id: PBO:0072131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 8","termid":"PBO:0072131"}


id: MONDO:0009495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keutel syndrome is characterized by diffuse cartilage calcification, brachytelephalangism, peripheral pulmonary artery stenoses and facial dysmorphism.","definition_xrefs":["Orphanet:85202"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Keutel syndrome","secondary_identifiers":["GARD:8449","UMLS:C1855607","SCTID:724208006","MEDGEN:383722","OMIM:245150","icd11.foundation:1083151379","MESH:C536167"],"synonyms":[{"name":"KEUTEL syndrome","type":"related"},{"name":"KTLS","type":"related"},{"name":"Keutel syndrome","type":"exact"},{"name":"pulmonic stenosis brachytelephalangism and calcification of cartilages","type":"related"},{"name":"pulmonic stenosis, brachytelephalangism, and calcification of cartilages","type":"related"},{"name":"pulmonic stenosis-brachytelephalangism-calcification of cartilages syndrome","type":"exact"}],"termid":"MONDO:0009495","xrefs":{"Monarch":{"xref_id":"0009495"}}}


id: PBO:0051655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 10","termid":"PBO:0051655"}


id: GO:0071533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by an ankyrin repeat interaction.","definition_xrefs":["GOC:amm","InterPro:IPR002110"],"gene_count":0,"genotype_count":0,"name":"obsolete ankyrin repeat-mediated complex assembly (obsolete GO:0071533)","synonyms":[{"name":"ANK repeat-mediated complex assembly","type":"exact"}],"termid":"GO:0071533"}


id: GO:0061456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal stem cell from one site to another contributing to the shaping of the ureteric bud. A mesenchymal stem cell, or MSC, is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in kidney development","termid":"GO:0035787"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell migration involved in uteric bud morphogenesis","termid":"GO:0061456"}


id: PBO:0072896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCA7/ATXN7 antisense RNA 1","termid":"PBO:0072896"}


id: GO:0060544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"regulates","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of necroptotic process","synonyms":[{"name":"regulation of necroptosis","type":"narrow"}],"termid":"GO:0060544"}


id: MONDO:0014126
data:
  {"annotated_genes":["SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85234],"is_not":false,"summary":null,"term":"MONDO:0014126"}]},"cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the LARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0006025","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"Perrault syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815435","UMLS:C3809105","OMIM:615300","GARD:15943"],"synonyms":[{"name":"LARS2 Perrault syndrome","type":"exact"},{"name":"PRLTS4","type":"related"},{"name":"Perrault syndrome 4","type":"exact"},{"name":"Perrault syndrome caused by mutation in LARS2","type":"exact"},{"name":"Perrault syndrome type 4","type":"exact"}],"termid":"MONDO:0014126","terms_by_termid":{"MONDO:0014126":null},"xrefs":{"Monarch":{"xref_id":"0014126"}}}


id: FYPO:0007704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is decreased when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:26443240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to lateral cell cortex during glucose starvation","synonyms":[{"name":"decreased protein localisation to lateral cell cortex during glucose starvation","type":"exact"},{"name":"decreased protein localization to cell side during glucose starvation","type":"related"},{"name":"decreased protein localization to lateral cell cortex during cellular response to glucose starvation","type":"exact"},{"name":"decreased protein localization to lateral cell cortex during glucose depletion","type":"exact"},{"name":"decreased protein localization to lateral cell cortex during glucose deprivation","type":"exact"},{"name":"decreased protein localization to lateral cortex during glucose starvation","type":"exact"},{"name":"reduced protein localization to lateral cell cortex during glucose starvation","type":"exact"}],"termid":"FYPO:0007704"}


id: GO:0031229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of nuclear inner membrane (obsolete GO:0031229)","synonyms":[{"name":"intrinsic to nuclear inner membrane","type":"narrow"}],"termid":"GO:0031229"}


id: PBO:0091121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase complex subunit Gta3","termid":"PBO:0091121"}


id: PBO:0048712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 3 pseudogene 1","termid":"PBO:0048712"}


id: GO:0070291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acylethanolamines. An N-acylethanolamine is an ethanolamine substituted at nitrogen by an acyl group.","definition_xrefs":["PMID:14634025","CHEBI:52640","PMID:15878693","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ethanolamine-containing compound metabolic process","termid":"GO:0042439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"N-acylethanolamine metabolic process","synonyms":[{"name":"N-acylethanolamine metabolism","type":"exact"},{"name":"NAE metabolic process","type":"exact"},{"name":"NAE metabolism","type":"exact"}],"termid":"GO:0070291"}


id: PBO:0086783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP fusion protein localizes to the cell periphery while mCherry fusion protein localizes to both the cell periphery and vacuole; YFL051C is not an essential gene","termid":"PBO:0086783"}


id: PBO:0047839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD dependent oxidoreductase domain containing 2","termid":"PBO:0047839"}


id: PBO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1, human ASCC3 ortholog (predicted)","termid":"PBO:0018054"}


id: GO:0034906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-isopropylaniline + O2 + 2 H+ + NADH = catechol + NAD+ + isopropylamine.","definition_xrefs":["UM-BBD_reactionID:r0721"],"gene_count":0,"genotype_count":0,"name":"obsolete N-isopropylaniline 1,2-dixoxygenase activity (obsolete GO:0034906)","termid":"GO:0034906"}


id: PBO:0045473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRG1 pseudogene 2","termid":"PBO:0045473"}


id: PBO:0082487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catabolic L-serine (L-threonine) deaminase; catalyzes the degradation of both L-serine and L-threonine; required to use serine or threonine as the sole nitrogen source, transcriptionally induced by serine and threonine","termid":"PBO:0082487"}


id: PBO:0069545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 816, pseudogene","termid":"PBO:0069545"}


id: PBO:0031149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polysaccharide_level","termid":"PBO:0031149"}


id: GO:0030521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by an androgen binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"androgen receptor signaling pathway","synonyms":[{"name":"androgen receptor signalling pathway","type":"exact"},{"name":"nuclear-receptor-mediated androgen receptor signaling pathway","type":"exact"}],"termid":"GO:0030521"}


id: PBO:0047036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 99 member A","termid":"PBO:0047036"}


id: PBO:0054019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1349","termid":"PBO:0054019"}


id: SO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet in which the main chains of two consecutive residues are H-bonded to that of the third, and in which the dihedral angles are as follows: Residue(i): -140 degrees < phi(l) -20 degrees , -90 degrees < psi(l) < 40 degrees. Residue (i+1): -180 degrees < phi < -25 degrees or +120 degrees < phi < +180 degrees, +40 degrees < psi < +180 degrees or -180 degrees < psi < -120 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge","secondary_identifiers":["http://en.wikipedia.org/wiki/Beta_bulge","BS:00208"],"synonyms":[{"name":"beta bulge","type":"exact"}],"termid":"SO:0001107"}


id: PBO:0084634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2843 methylation of the 25S rRNA; S-adenosylmethionine-dependent; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR063W is not an essential gene","termid":"PBO:0084634"}


id: GO:0006546
data:
  {"annotated_genes":["SJAG_03290","SJAG_02901","SJAG_03641","SJAG_01271","SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97057],"is_not":false,"summary":null,"term":"GO:0006546"},{"annotations":[86643,112162,87882,95600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01271":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"glycine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycine breakdown","type":"exact"},{"name":"glycine catabolism","type":"exact"},{"name":"glycine degradation","type":"exact"}],"termid":"GO:0006546","terms_by_termid":{"GO:0006546":null,"GO:0019464":null}}


id: PBO:0067956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 258","termid":"PBO:0067956"}


id: GO:0140972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AIM2 inflammasome complex assembly.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of AIM2 inflammasome complex assembly","termid":"GO:0140971"},{"relation_name":"negatively_regulates","term_name":"AIM2 inflammasome complex assembly","termid":"GO:0140970"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of AIM2 inflammasome complex assembly","termid":"GO:0140972"}


id: FYPO:0009102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain less cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002399","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"interphase microtubules present in decreased numbers","synonyms":[{"name":"decreased number of interphase microtubules","type":"exact"},{"name":"fewer microtubules present during mitotic interphase","type":"exact"}],"termid":"FYPO:0009102"}


id: PBO:0057087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 183","termid":"PBO:0057087"}


id: PBO:0048674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid induced 1","termid":"PBO:0048674"}


id: PBO:0038706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1","termid":"PBO:0038706"}


id: PBO:0109081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3105","termid":"PBO:0109081"}


id: PBO:0091824
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by A. thaliana cdc2bAt","termid":"PBO:0091824"}


id: PBO:0085156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome spacing factor; subunit of complex containing actin and actin-related proteins that has chromatin remodeling activity and 3' to 5' DNA helicase activity; involved in positioning and spacing of nucleosomes over most genes independently of transcription; promotes nucleosome shifts in the 3' direction; has a role in modulating stress gene transcription","termid":"PBO:0085156"}


id: FYPO:0000688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","termid":"FYPO:0000687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","synonyms":[{"name":"reduced peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","type":"exact"}],"termid":"FYPO:0000688"}


id: FYPO:0005306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"abnormal protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to chromatin at centromere","type":"exact"}],"termid":"FYPO:0005306"}


id: GO:0031427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methotrexate stimulus. Methotrexate is 4-amino-10-methylformic acid, a folic acid analogue that is a potent competitive inhibitor of dihydrofolate reductase.","definition_xrefs":["GOC:ef","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methotrexate","termid":"GO:0031427"}


id: PBO:0054210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1590","termid":"PBO:0054210"}


id: MONDO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a oculomotor nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"third cranial nerve disorder","termid":"MONDO:0003546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor nerve neoplasm","secondary_identifiers":["DOID:2817","UMLS:C1263895","NCIT:C6994","ICD9:239.7","MEDGEN:220391","SCTID:126969002"],"synonyms":[{"name":"IIIrd cranial nerve tumor","type":"exact"},{"name":"IIIrd cranial nerve tumour","type":"exact"},{"name":"cranial nerve III tumor","type":"related"},{"name":"cranial nerve III tumour","type":"related"},{"name":"neoplasm of oculomotor nerve","type":"exact"},{"name":"oculomotor nerve neoplasm","type":"exact"},{"name":"oculomotor nerve neoplasm (disease)","type":"exact"},{"name":"oculomotor nerve tumor","type":"exact"},{"name":"oculomotor nerve tumour","type":"exact"},{"name":"tumor of oculomotor nerve","type":"exact"},{"name":"tumour of oculomotor nerve","type":"exact"}],"termid":"MONDO:0002435","xrefs":{"Monarch":{"xref_id":"0002435"}}}


id: PBO:0068947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 191, pseudogene","termid":"PBO:0068947"}


id: MONDO:0020759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"childhood absence epilepsy","termid":"MONDO:0010826"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, childhood absence, susceptibility to, 1","secondary_identifiers":["MEDGEN:325057","UMLS:C1838604","OMIM:600131"],"synonyms":[{"name":"ECA1","type":"exact"},{"name":"epilepsy, childhood absence, 1","type":"exact"},{"name":"epilepsy, childhood absence, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0020759","xrefs":{"Monarch":{"xref_id":"0020759"}}}


id: PBO:0036386
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Saitoella complicata DPS1","termid":"PBO:0036386"}


id: PBO:0047719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 10, pseudogene","termid":"PBO:0047719"}


id: PBO:0046298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"empty spiracles homeobox 1","termid":"PBO:0046298"}


id: GO:0090152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the mitochondrial membrane that contributes to mitochondrial fission.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179","GO:0007005"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrial membrane involved in mitochondrial fission","synonyms":[{"name":"establishment of protein localisation in mitochondrial membrane involved in mitochondrial fission","type":"exact"},{"name":"establishment of protein localization in mitochondrial membrane involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090152"}


id: MONDO:0019045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare form of sleep disorder.","gene_count":0,"genotype_count":0,"name":"obsolete rare sleep disorder (obsolete MONDO:0019045)","secondary_identifiers":["MedDRA:10040984","MESH:D012893","Orphanet:68354"],"synonyms":[{"name":"rare sleep disorder","type":"exact"},{"name":"rare sleep wake disorder","type":"exact"},{"name":"rare sleep-wake disorder","type":"exact"}],"termid":"MONDO:0019045","xrefs":{"Monarch":{"xref_id":"0019045"}}}


id: PBO:0052868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-11","termid":"PBO:0052868"}


id: GO:0000993
data:
  {"annotated_genes":["SJAG_04353","SJAG_00448","SJAG_01610","SJAG_01151","SJAG_04933","SJAG_00139","SJAG_00483","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70403,71691,75700,77859,77873],"is_not":false,"summary":null,"term":"GO:0000993"},{"annotations":[64600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[77334,71819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal RNA polymerase II transcription machinery binding","termid":"GO:0001099"},{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II complex binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase II core binding","type":"exact"},{"name":"RNAP II core binding","type":"exact"}],"termid":"GO:0000993","terms_by_termid":{"GO:0000993":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0080017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 3","termid":"PBO:0080017"}


id: MONDO:0006000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of peritonitis seen in patients with tuberculosis, characterized by lesion either as a miliary form or as a pelvic mass on the peritoneal surfaces. Most patients have ascites, abdominal swelling, abdominal pain, and other systemic symptoms such as fever; weight loss; and anemia.","definition_xrefs":["MESH:D014395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal tuberculosis","termid":"MONDO:0000369"},{"relation_name":"is_a","term_name":"peritonitis","termid":"MONDO:0004522"},{"relation_name":"is_a","term_name":"gastrointestinal tuberculosis","termid":"MONDO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"tuberculous peritonitis","secondary_identifiers":["ICD10CM:A18.31","ICD9:014.01","ICD9:014.00","MEDGEN:22516","SCTID:44572005","icd11.foundation:925657864","EFO:0007529","DOID:9801","ICD9:014.0","UMLS:C0041325"],"synonyms":[{"name":"Mycobacterium tuberculosis caused peritonitis","type":"exact"},{"name":"Mycobacterium tuberculosis peritonitis","type":"exact"}],"termid":"MONDO:0006000","xrefs":{"Monarch":{"xref_id":"0006000"}}}


id: PBO:0038793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase like","termid":"PBO:0038793"}


id: MONDO:0013794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial thrombocytosis in which the cause of the disease is a mutation in the JAK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential thrombocythemia","termid":"MONDO:0005029"},{"relation_name":"is_a","term_name":"familial thrombocytosis","termid":"MONDO:0019111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocythemia 3","secondary_identifiers":["OMIM:614521","UMLS:C3281125","MEDGEN:482755"],"synonyms":[{"name":"JAK2 familial thrombocytosis","type":"exact"},{"name":"THCYT3","type":"related"},{"name":"familial thrombocytosis caused by mutation in JAK2","type":"exact"},{"name":"thrombocythemia 3","type":"exact"},{"name":"thrombocythemia 3, autosomal dominant, somatic mutation","type":"exact"},{"name":"thrombocythemia type 3","type":"exact"},{"name":"thrombocytosis 3","type":"related"}],"termid":"MONDO:0013794","xrefs":{"Monarch":{"xref_id":"0013794"}}}


id: PBO:0064751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 87","termid":"PBO:0064751"}


id: GO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a calcium channel in the bitten organism.","definition_xrefs":["PMID:20920515","GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of calcium channel activity in another organism","termid":"GO:0044472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044473"}


id: MONDO:0000375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a bronchus.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchogenic carcinoma","termid":"MONDO:0002806"},{"relation_name":"is_a","term_name":"lung carcinoma in situ","termid":"MONDO:0004660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bronchus carcinoma in situ","secondary_identifiers":["UMLS:C2939445","DOID:0050614","MEDGEN:754440","SCTID:92557009"],"synonyms":[{"name":"bronchus in situ carcinoma","type":"exact"},{"name":"carcinoma in situ of bronchus","type":"exact"},{"name":"stage 0 bronchus carcinoma","type":"exact"}],"termid":"MONDO:0000375","xrefs":{"Monarch":{"xref_id":"0000375"}}}


id: GO:0032184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polymer of the small ubiquitin-like protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO binding","termid":"GO:0032183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"SUMO polymer binding","synonyms":[{"name":"Smt3 polymer binding","type":"exact"}],"termid":"GO:0032184"}


id: MOD:00613
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:10906242","Unimod:294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"biotinoyl-iodoacetyl-ethylenediamine","synonyms":[{"name":"IED-Biotin","type":"related"},{"name":"biotinoyl-iodoacetyl-ethylenediamine","type":"related"}],"termid":"MOD:00613"}


id: MONDO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving the Capillaria.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Enoplea infectious disease","termid":"MONDO:0005745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillariasis","secondary_identifiers":["ICD9:127.5","MEDGEN:507518","DOID:12474","SCTID:52979002","UMLS:C0006897","icd11.foundation:839653996"],"synonyms":[{"name":"Capillaria infection","type":"exact"},{"name":"infections, Capillaria","type":"related"}],"termid":"MONDO:0001532","xrefs":{"Monarch":{"xref_id":"0001532"}}}


id: PBO:0070430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog","termid":"PBO:0070430"}


id: PATO:0001627
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wholeness quality inhering in a bearer by virtue of the bearer's has enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sufficiency","termid":"PATO:0001626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sufficient","synonyms":[{"name":"adequate","type":"related"}],"termid":"PATO:0001627"}


id: PBO:0062175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily L member 1","termid":"PBO:0062175"}


id: MONDO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilatation of the intestinal lymphatic system usually caused by an obstruction in the intestinal wall. It may be congenital or acquired and is characterized by diarrhea; hypoproteinemia; peripheral and/or abdominal edema; and protein-losing enteropathies.","definition_xrefs":["MESH:D008201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal lymphangiectasia","secondary_identifiers":["GARD:12331","Orphanet:36204","icd11.foundation:1255239964","MedDRA:10025213","ICD9:457.1","SCTID:197260007","UMLS:C0024215","NANDO:2100256","MEDGEN:9828","NANDO:2200914","HP:0002593"],"synonyms":[{"name":"intestinal lymphangiectasia","type":"exact"},{"name":"intestinal lymphangiectasia (disease)","type":"exact"}],"termid":"MONDO:0018178","xrefs":{"Monarch":{"xref_id":"0018178"}}}


id: GO:0006226
data:
  {"annotated_genes":["SJAG_04487","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98185,107532],"is_not":false,"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dUMP, deoxyuridine monophosphate (2'-deoxyuridine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dUMP metabolic process","termid":"GO:0046078"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dUMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dUMP anabolism","type":"exact"},{"name":"dUMP biosynthesis","type":"exact"},{"name":"dUMP formation","type":"exact"},{"name":"dUMP synthesis","type":"exact"}],"termid":"GO:0006226","terms_by_termid":{"GO:0006226":null}}


id: PBO:0001798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase (predicted)","termid":"PBO:0001798"}


id: PBO:0078362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 7-1","termid":"PBO:0078362"}


id: GO:0090172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins that contributes to chromosomal pairing and precedes synapsis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule cytoskeleton organization involved in homologous chromosome segregation (obsolete GO:0090172)","synonyms":[{"name":"microtubule cytoskeleton organisation involved in homologous chromosome segregation","type":"exact"},{"name":"microtubule organization involved in chromosome pairing","type":"exact"}],"termid":"GO:0090172"}


id: MONDO:0009178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa dystrophica Neurotrophica","secondary_identifiers":["SCTID:254176007","OMIM:226500","UMLS:C0268368","ICD9:757.39","MEDGEN:78666","MESH:C562637"],"synonyms":[{"name":"epidermolysis bullosa dystrophica Neurotrophica","type":"exact"},{"name":"epidermolysis bullosa progressiva, recessive","type":"related"},{"name":"epidermolysis bullosa with congenital deafness","type":"related"}],"termid":"MONDO:0009178","xrefs":{"Monarch":{"xref_id":"0009178"}}}


id: SO:0001292
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5-hydroxymethylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_hydroxymethylcytidine","secondary_identifiers":["RNAMOD:084"],"synonyms":[{"name":"5-hydroxymethylcytidine","type":"exact"},{"name":"five hydroxymethylcytidine","type":"exact"},{"name":"hm5C","type":"exact"}],"termid":"SO:0001292"}


id: PBO:0030530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0030530"}


id: PBO:0079662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 10","termid":"PBO:0079662"}


id: MONDO:1012909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brittle, discolored, translucent teeth, disproportionate growth and progressive retinal degeneration resulting in vision loss that occurs in dogs due to a mutation in the MIA3 gene.","definition_xrefs":["PMID:34680893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental-skeletal-retinal anomaly, MIA3-related, dog","secondary_identifiers":["OMIA:002465-9615"],"termid":"MONDO:1012909","xrefs":{"Monarch":{"xref_id":"1012909"}}}


id: PR:000027512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-phase inducer phosphatase phosphorylated 1 in Schizosaccharomyces pombe. This form is produced by phosphorylation by Cds1 or Chk1 during replication checkpoint. Example: UniProtKB:P06652-1, Ser-99/Ser-192/Ser-359, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:9774107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-phase inducer phosphatase","termid":"PR:000027506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc25/Phos(S99,S192,S359)","pombase_gene_id":"SPAC24H6.05","synonyms":[{"name":"PomBase_original_PRO_term_name: M-phase inducer phosphatase phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc25/Phos:1","type":"exact"},{"name":"cdc25/Phos(S99,S192,S359)","type":"exact"}],"termid":"PR:000027512"}


id: MONDO:0018608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pure autonomic failure (PAF) is a neurodegenerative disease that affects the sympathetic branch of the autonomous nervous system and that manifests with orthostatic hypotension.","definition_xrefs":["Orphanet:441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005559"],"is_obsolete":false,"name":"pure autonomic failure","secondary_identifiers":["MEDGEN:98293","SCTID:84438001","MESH:D054970","UMLS:C0393911","NORD:1948","icd11.foundation:734022291","GARD:10428"],"synonyms":[{"name":"Bradbury Eggleston syndrome","type":"exact"},{"name":"Bradbury-Eggleston syndrome","type":"exact"},{"name":"PAF","type":"exact"},{"name":"Pure dysautonomia","type":"exact"},{"name":"Pure idiopatic dysautonomia","type":"exact"},{"name":"idiopathic orthostatic hypotension","type":"exact"},{"name":"idiopathic orthostatic hypotension (a symptom)","type":"related"},{"name":"orthostatic hypotension (a symptom)","type":"related"}],"termid":"MONDO:0018608","xrefs":{"Monarch":{"xref_id":"0018608"}}}


id: GO:0072248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a metanephric glomerular visceral epithelial cell. A metanephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"podocyte differentiation","termid":"GO:0072112"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric podocyte differentiation","synonyms":[{"name":"metanephric glomerular visceral epithelial cell differentiation","type":"exact"}],"termid":"GO:0072248"}


id: MONDO:0017605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ependymal tumor (obsolete MONDO:0017605)","termid":"MONDO:0017605","xrefs":{"Monarch":{"xref_id":"0017605"}}}


id: PBO:0054321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1713","termid":"PBO:0054321"}


id: PBO:0112883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dihydrolipoamide S-succinyltransferase, (e2 component of oxoglutarate dehydrogenase complex) Kgd2","termid":"PBO:0112883"}


id: PBO:0043569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 6 chain","termid":"PBO:0043569"}


id: PBO:0078160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 38-1","termid":"PBO:0078160"}


id: GO:1903249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of citrulline biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:19278978","GOC:BHF","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of citrulline biosynthetic process","termid":"GO:1903248"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"citrulline biosynthetic process","termid":"GO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of citrulline biosynthetic process","synonyms":[{"name":"down regulation of citrulline anabolism","type":"exact"},{"name":"down regulation of citrulline biosynthesis","type":"exact"},{"name":"down regulation of citrulline biosynthetic process","type":"exact"},{"name":"down regulation of citrulline formation","type":"exact"},{"name":"down regulation of citrulline synthesis","type":"exact"},{"name":"down-regulation of citrulline anabolism","type":"exact"},{"name":"down-regulation of citrulline biosynthesis","type":"exact"},{"name":"down-regulation of citrulline biosynthetic process","type":"exact"},{"name":"down-regulation of citrulline formation","type":"exact"},{"name":"down-regulation of citrulline synthesis","type":"exact"},{"name":"downregulation of citrulline anabolism","type":"exact"},{"name":"downregulation of citrulline biosynthesis","type":"exact"},{"name":"downregulation of citrulline biosynthetic process","type":"exact"},{"name":"downregulation of citrulline formation","type":"exact"},{"name":"downregulation of citrulline synthesis","type":"exact"},{"name":"inhibition of citrulline anabolism","type":"narrow"},{"name":"inhibition of citrulline biosynthesis","type":"narrow"},{"name":"inhibition of citrulline biosynthetic process","type":"narrow"},{"name":"inhibition of citrulline formation","type":"narrow"},{"name":"inhibition of citrulline synthesis","type":"narrow"},{"name":"negative regulation of citrulline anabolism","type":"exact"},{"name":"negative regulation of citrulline biosynthesis","type":"exact"},{"name":"negative regulation of citrulline formation","type":"exact"},{"name":"negative regulation of citrulline synthesis","type":"exact"}],"termid":"GO:1903249"}


id: PBO:0005747
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.11.-","termid":"PBO:0005747"}


id: PBO:0049636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 39","termid":"PBO:0049636"}


id: PBO:0047741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 4","termid":"PBO:0047741"}


id: MONDO:0016077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations","termid":"MONDO:0016581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital aortopulmonary window","secondary_identifiers":["Orphanet:2037","icd11.foundation:1988278118","MEDGEN:419119","MESH:C537782","UMLS:C2931610","GARD:738"],"synonyms":[{"name":"aorta-pulmonary artery fistula","type":"related"},{"name":"aorto-pulmonary artery fistula","type":"related"},{"name":"aortopulmonary fistula","type":"related"},{"name":"congenital aortopulmonary artery fistula","type":"exact"},{"name":"congenital aortopulmonary septal defect","type":"exact"}],"termid":"MONDO:0016077","xrefs":{"Monarch":{"xref_id":"0016077"}}}


id: PBO:0057340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 526a-1","termid":"PBO:0057340"}


id: MONDO:0958076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of spina bifida/open neural tube defect (NTD) chacterized by absence of a cystic component, dysplastic meninges and neural placode exposed through a defect in the posterior vertebral arches (spina bifida) that are contiguous with surrounding skin. The placode is at or below the skin plane and is typically associated with a Chiari II malformation. It is usually isolated or rarely associated with split cord malformation.","definition_xrefs":["Orphanet:645398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myeloschisis","secondary_identifiers":["UMLS:C0266507","icd11.foundation:1547705800","MEDGEN:539965"],"termid":"MONDO:0958076","xrefs":{"Monarch":{"xref_id":"0958076"}}}


id: PBO:0086744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possibly involved in zinc homeostasis; Bdf1p-dependent transcription induced by salt stress; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086744"}


id: PBO:0013010
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Homologue of HOG1","termid":"PBO:0013010"}


id: PBO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc5","termid":"PBO:0001205"}


id: MONDO:0006799
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A primary or metastatic neoplasm that affects the hypothalamus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thalamic cancer","termid":"MONDO:0003766"},{"relation_name":"is_a","term_name":"hypothalamic disorder","termid":"MONDO:0002150"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"hypothalamic neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3644","SCTID:254968009","UMLS:C0020659","icd11.foundation:1383549237","MESH:D007029","NCIT:C3129","EFO:1000979","MEDGEN:5717"],"synonyms":[{"name":"hypothalamic neoplasms","type":"exact"},{"name":"hypothalamic tumor","type":"exact"},{"name":"hypothalamic tumour","type":"exact"},{"name":"hypothalamus neoplasm","type":"exact"},{"name":"hypothalamus tumor","type":"exact"},{"name":"hypothalamus tumour","type":"exact"},{"name":"neoplasm of hypothalamus","type":"exact"},{"name":"neoplasm of the hypothalamus","type":"exact"},{"name":"tumor of hypothalamus","type":"exact"},{"name":"tumor of the hypothalamus","type":"exact"},{"name":"tumour of hypothalamus","type":"exact"},{"name":"tumour of the hypothalamus","type":"exact"}],"termid":"MONDO:0006799","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0006799"}}}


id: GO:0004628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-independent cytosolic phospholipase A2 activity (obsolete GO:0004628)","synonyms":[{"name":"calcium-independent cytosolic phospholipase A2 activity","type":"exact"}],"termid":"GO:0004628"}


id: MONDO:0009801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial osteodysplasia, Anderson type is a rare, genetic dysostosis disorder characterized by craniofacial bone abnormalities (i.e. midface hypoplasia, broad, flat nasal bridge, narrow, thin prognathic mandible with pointed chin, malocclusion, partial dental agenesis) associated with additional osseous anomalies, including scoliosis, calvarial thinning, pointed spinous processes, clinodactyly and abnormal phalanges. Elevated erythrocyte sedimentation rate, hyperuricemia and hypertension have also been reported. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:2769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial osteodysplasia, Anderson type","secondary_identifiers":["OMIM:259250","icd11.foundation:107132680","MESH:C564923","UMLS:C1850186","GARD:4136","MEDGEN:337990"],"synonyms":[{"name":"osteodysplasia familial Anderson type","type":"related"},{"name":"osteodysplasia, familial, Anderson type","type":"related"}],"termid":"MONDO:0009801","xrefs":{"Monarch":{"xref_id":"0009801"}}}


id: GO:0046607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the centrosome cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"positive regulation of centrosome cycle","synonyms":[{"name":"activation of centrosome cycle","type":"narrow"},{"name":"stimulation of centrosome cycle","type":"narrow"},{"name":"up regulation of centrosome cycle","type":"exact"},{"name":"up-regulation of centrosome cycle","type":"exact"},{"name":"upregulation of centrosome cycle","type":"exact"}],"termid":"GO:0046607"}


id: PBO:0005070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha B-subunit","termid":"PBO:0005070"}


id: PBO:0043371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 1","termid":"PBO:0043371"}


id: MONDO:0000633
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the sense organ.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system benign neoplasm","termid":"MONDO:0000648"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"sensory organ benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060096"],"synonyms":[{"name":"sense organ benign neoplasm","type":"exact"}],"termid":"MONDO:0000633","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0000633"}}}


id: PBO:0068409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNFT1 divergent transcript","termid":"PBO:0068409"}


id: PBO:0038862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with dual PH domains 2","termid":"PBO:0038862"}


id: PBO:0029104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_lysine_level","termid":"PBO:0029104"}


id: PBO:0027752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus","termid":"PBO:0027752"}


id: MONDO:0010912
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85991],"is_not":false,"summary":null,"term":"MONDO:0010912"}]},"cv_name":"mondo","definition":"Any congenital fibrosis of extraocular muscles in which the cause of the disease is a mutation in the TUBB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"},{"relation_name":"is_a","term_name":"TUBB3-related tubulinopathy","termid":"MONDO:0100154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fibrosis of extraocular muscles, congenital, 3A, with or without extraocular involvement","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15321","MEDGEN:412638","DOID:0081017","UMLS:C2748801","MESH:C567572","OMIM:600638"],"synonyms":[{"name":"CFEOM3A","type":"related"},{"name":"Feom3 locus","type":"related"},{"name":"TUBB3 congenital fibrosis of extraocular muscles","type":"exact"},{"name":"congenital fibrosis of extraocular muscles caused by mutation in TUBB3","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 3A","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 3A, with or without extraocular involvement","type":"exact"}],"termid":"MONDO:0010912","terms_by_termid":{"MONDO:0010912":null},"xrefs":{"Monarch":{"xref_id":"0010912"}}}


id: PBO:0088611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim10","termid":"PBO:0088611"}


id: PBO:0081103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZEB2 antisense RNA 1","termid":"PBO:0081103"}


id: GO:0047437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-oxalocrotonate = CO2 + 2-oxopent-4-enoate.","definition_xrefs":["EC:4.1.1.77","MetaCyc:4.1.1.77-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-oxalocrotonate decarboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r1435","RHEA:24260"],"synonyms":[{"name":"4-oxalocrotonate carboxy-lyase (2-oxopent-4-enoate-forming)","type":"related"},{"name":"4-oxalocrotonate carboxy-lyase activity","type":"related"}],"termid":"GO:0047437"}


id: PBO:0030433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_methyltransferase_activity","termid":"PBO:0030433"}


id: GO:0051343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyclic nucleotide phosphodiesterase activity, the catalysis of the reaction: nucleotide 3',5'-cyclic phosphate + H2O = nucleotide 5'-phosphate.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclic-nucleotide phosphodiesterase activity","termid":"GO:0051342"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyclic-nucleotide phosphodiesterase activity","synonyms":[{"name":"3',5' cyclic nucleotide phosphodiesterase activator","type":"exact"},{"name":"3',5'-cyclic-AMP phosphodiesterase activator","type":"narrow"},{"name":"activation of cyclic nucleotide phosphodiesterase activity","type":"narrow"},{"name":"cAMP phosphodiesterase activator","type":"narrow"},{"name":"phosphodiesterase activator","type":"related"},{"name":"positive regulation of 3',5' cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"positive regulation of 3',5'-cyclic-AMP phosphodiesterase activity","type":"narrow"},{"name":"positive regulation of cAMP phosphodiesterase activity","type":"narrow"},{"name":"positive regulation of cGMP phosphodiesterase activity","type":"narrow"},{"name":"positive regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"stimulation of cyclic nucleotide phosphodiesterase activity","type":"narrow"},{"name":"up regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"upregulation of cyclic nucleotide phosphodiesterase activity","type":"exact"}],"termid":"GO:0051343"}


id: PBO:0027992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0027992"}


id: MONDO:0020503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete resistance to thyrotropin-releasing hormone syndrome (obsolete MONDO:0020503)","termid":"MONDO:0020503","xrefs":{"Monarch":{"xref_id":"0020503"}}}


id: MONDO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spotted fever that has material basis in Rickettsia honei, which is transmitted by cayenne ticks (Amblyomma cajennense). The infection has symptom mild spotted fever, has symptom eschar and has symptom adenopathy.","definition_xrefs":["DOID:0050047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flinders island spotted fever","secondary_identifiers":["UMLS:C4505102","MEDGEN:1375989"],"synonyms":[{"name":"FISF","type":"related"},{"name":"Thai tick typhus","type":"exact"}],"termid":"MONDO:0000232","xrefs":{"Monarch":{"xref_id":"0000232"}}}


id: FYPO:0003519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular hercynylcysteine sulfoxide level","termid":"FYPO:0003522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"increased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"increased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"increased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0003519"}


id: GO:1900161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"regulation of lipid transporter activity","termid":"GO:0110112"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of phospholipid scramblase activity","termid":"GO:1900161"}


id: GO:0030134
data:
  {"annotated_genes":["SJAG_05345","SJAG_04740","SJAG_03907","SJAG_02264","SJAG_02839","SJAG_00557","SJAG_00906","SJAG_05013","SJAG_03558","SJAG_04023","SJAG_04196","SJAG_01633","SJAG_03933","SJAG_02539","SJAG_01939","SJAG_03153","SJAG_01991","SJAG_04002","SJAG_04513","SJAG_00785","SJAG_02349","SJAG_02120","SJAG_01642","SJAG_00284","SJAG_04112","SJAG_00357","SJAG_04598","SJAG_03270","SJAG_04402","SJAG_00767","SJAG_00072","SJAG_04592","SJAG_05344"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89478,90731,92339,93457,93584,94807,95284,102443,103449,106460,107570,109883,113459,114738,115473,115650,116095,117922],"is_not":false,"summary":null,"term":"GO:0030134"},{"annotations":[92554,111845,107877,115725,111115,70770,94706,74362,105723,109353],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[107179,108949,100262,94744,113324],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of the COPII coat complex proteins. The COPII coat complex is formed by the Sec23p/Sec24p and the Sec13p/Sec31p heterodimers. COPII-associated vesicles transport proteins from the rough endoplasmic reticulum to the Golgi apparatus (anterograde transport).","definition_xrefs":["PMID:8004676","Wikipedia:COPII","PMID:11252894","PMID:17499046","PMID:22160157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00357":null,"SJAG_00557":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01939":null,"SJAG_01991":null,"SJAG_02120":null,"SJAG_02264":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03270":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04402":null,"SJAG_04513":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04740":null,"SJAG_05013":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"COPII-coated ER to Golgi transport vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030138","GO:0140045"],"synonyms":[{"name":"COPII vesicle","type":"related"},{"name":"COPII-associated ER to Golgi transport vesicle","type":"exact"},{"name":"COPII-associated vesicle","type":"exact"},{"name":"COPII-coated vesicle","type":"exact"},{"name":"ER to Golgi constitutive secretory pathway transport vesicle","type":"related"},{"name":"ER to Golgi transport vesicle","type":"related"},{"name":"ER-Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum to Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum-Golgi transport vesicle","type":"related"}],"termid":"GO:0030134","terms_by_termid":{"GO:0012507":null,"GO:0030127":null,"GO:0030134":null}}


id: MONDO:0015662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to an acquired coagulation factor defect (obsolete MONDO:0015662)","secondary_identifiers":["Orphanet:166775"],"synonyms":[{"name":"rare bleeding disorder due to an acquired coagulation factor defect","type":"exact"},{"name":"rare coagulopathy due to an acquired coagulation factor defect","type":"exact"}],"termid":"MONDO:0015662","xrefs":{"Monarch":{"xref_id":"0015662"}}}


id: GO:0120252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a hydrocarbon, a compound consisting of carbon and hydrogen only.","definition_xrefs":["Wikipedia:Hydrocarbon","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrocarbon metabolic process","synonyms":[{"name":"hydrocarbon metabolism","type":"exact"}],"termid":"GO:0120252"}


id: PBO:0062903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXR1 antisense RNA 1","termid":"PBO:0062903"}


id: PBO:0085789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; almost completely overlaps verified ORF RCO1/YMR075W","termid":"PBO:0085789"}


id: PBO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCD2 pseudogene 2","termid":"PBO:0047280"}


id: PBO:0054545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1945","termid":"PBO:0054545"}


id: PBO:0079707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 1 pseudogene 1","termid":"PBO:0079707"}


id: PBO:0050633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked member 3","termid":"PBO:0050633"}


id: MONDO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A labyrinthitis which is a bacterial infectious disease of the inner ear, often causing deafness and loss of vestibular function. This is caused when bacteria spread to the inner ear during the course of severe acute otitis media, purulent meningitis, or an enlarging cholesteatoma.","definition_xrefs":["DOID:13534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purulent labyrinthitis","secondary_identifiers":["SCTID:24817009","UMLS:C0155506","ICD9:386.33","icd11.foundation:479586656","MEDGEN:509995"],"synonyms":[{"name":"acute suppurative labyrinthitis","type":"related"},{"name":"bacterial labyrinthitis","type":"exact"},{"name":"suppurative labyrinthitis","type":"exact"}],"termid":"MONDO:0001739","xrefs":{"Monarch":{"xref_id":"0001739"}}}


id: GO:0031674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end.","definition_xrefs":["ISBN:0321204131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"I band","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"I disc","type":"exact"},{"name":"J disc","type":"exact"},{"name":"isotropic disc","type":"exact"}],"termid":"GO:0031674"}


id: PBO:0073807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A12 antisense RNA 1","termid":"PBO:0073807"}


id: RO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"releases_neurotransmitter","termid":"RO:0002111"}


id: GO:0008481
data:
  {"annotated_genes":["SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a sphingoid base + ATP = a sphingoid 1-phosphate + ADP + H+.","definition_xrefs":["RHEA:51496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02429":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"sphingosine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.91","GO:0001728","MetaCyc:SPHINGANINE-KINASE-RXN"],"synonyms":[{"name":"ATP:sphinganine 1-phosphotransferase activity","type":"related"},{"name":"dihydrosphingosine kinase (phosphorylating)","type":"related"},{"name":"dihydrosphingosine kinase activity","type":"related"},{"name":"sphinganine kinase activity","type":"related"},{"name":"sphingosine kinase (phosphorylating)","type":"related"}],"termid":"GO:0008481","terms_by_termid":{"GO:0017050":null}}


id: PBO:0080626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 73","termid":"PBO:0080626"}


id: PBO:0073163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC63 homolog, protein translocation regulator","termid":"PBO:0073163"}


id: MONDO:0014839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea, childhood-onset, with psychomotor retardation","secondary_identifiers":["MEDGEN:934754","OMIM:616939","UMLS:C4310787"],"synonyms":[{"name":"COCPMR","type":"exact"},{"name":"chorea, childhood-onset, with psychomotor retardation","type":"exact"},{"name":"chorea, childhood-onset, with psychomotor retardation; COCPMR","type":"exact"}],"termid":"MONDO:0014839","xrefs":{"Monarch":{"xref_id":"0014839"}}}


id: PBO:0028250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cytokinesis","termid":"PBO:0028250"}


id: GO:0102985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z)-hexadecenoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (9Z,12Z)-hexadecadienoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O. Also converts (9Z)-octadecenoyl-CoA into (9Z,12Z)-octadecadienoyl-CoA. This microsomal enzyme introduces a cis double bond at position 12 of fatty-acyl-CoAs that contain a cis double bond at position 9.","definition_xrefs":["EC:1.14.19.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"delta12-fatty-acid desaturase activity","termid":"GO:0102985"}


id: PBO:0036532
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ3 with an S. pombe MTS","termid":"PBO:0036532"}


id: GO:0015151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of alpha-glucosides from one side of a membrane to the other. Alpha-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in an alpha configuration.","definition_xrefs":["ISBN:0815340729","PMID:28510148","GOC:jl","GOC:mtg_transport","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"alpha-glucoside transmembrane transporter activity","termid":"GO:0015151"}


id: MONDO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of a non-infectious thrombus, referred to as vegetation, on previously undamaged endocardium. It usually occurs as a complication of connective-tissue diseases and cancers because of the associated hypercoagulable state (see thrombophilia).","definition_xrefs":["MESH:D059905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"},{"relation_name":"is_a","term_name":"endocarditis","termid":"MONDO:0005025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005570"],"is_obsolete":false,"name":"marantic endocarditis","secondary_identifiers":["MEDGEN:452215","UMLS:C0221390","DOID:0060068","SCTID:57181007"],"synonyms":[{"name":"non-bacterial thrombotic endocarditis","type":"exact"},{"name":"nonbacterial thrombotic endocarditis","type":"exact"}],"termid":"MONDO:0000610","xrefs":{"Monarch":{"xref_id":"0000610"}}}


id: PR:O74841
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An FAD synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23293:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.04c","secondary_identifiers":["UniProtKB:O74841"],"synonyms":[{"name":"FAD pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FLAD1","type":"exact"},{"name":"flavin adenine dinucleotide synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74841"}


id: GO:0030794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (S)-coclaurine = S-adenosyl-L-homocysteine + (S)-N-methylcoclaurine.","definition_xrefs":["EC:2.1.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"(S)-coclaurine-N-methyltransferase activity","secondary_identifiers":["RHEA:17409","MetaCyc:2.1.1.140-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-coclaurine-N-methyltransferase activity","type":"related"}],"termid":"GO:0030794"}


id: PBO:0012031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase","termid":"PBO:0012031"}


id: MONDO:0011597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 20p.","definition_xrefs":["DOID:0110099","MONDO:patterns/inherited_susceptibility","PMID:11279517"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 3","secondary_identifiers":["MEDGEN:344173","UMLS:C1853964","MESH:C565292","OMIM:605804"],"synonyms":[{"name":"ATOD3","type":"exact"},{"name":"atopic dermatitis 3","type":"exact"},{"name":"atopic dermatitis type 3","type":"exact"},{"name":"atopic dermatitis with asthma","type":"exact"},{"name":"dermatitis, ATOPIC, 3","type":"related"},{"name":"dermatitis, Atopic, with asthma","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0011597","xrefs":{"Monarch":{"xref_id":"0011597"}}}


id: GO:0033558
data:
  {"annotated_genes":["SJAG_00581","SJAG_04039","SJAG_01075","SJAG_03627","SJAG_03844","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108627,113560],"is_not":false,"summary":null,"term":"GO:0033558"},{"annotations":[111252,108620,96416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004407"},{"annotations":[108621,111253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[103369,113553,89260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[113554,89261,103370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097372"},{"annotations":[89262,103371,113555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[103372,113556,89263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[108622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[89264,103373,113557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[108623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[108624,96417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[103374,89265,113558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[108625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[108626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Removal of an acetyl group from a lysine residue in a protein.","definition_xrefs":["RHEA:58108","PMID:27296530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_01075":null,"SJAG_03627":null,"SJAG_03844":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0019213","GO:0003824"],"is_obsolete":false,"name":"protein lysine deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9841847","Reactome:R-HSA-5693092","Reactome:R-HSA-9701565","Reactome:R-HSA-9626962","Reactome:R-HSA-8952069","Reactome:R-HSA-9825772"],"synonyms":[{"name":"protein deacetylase activity","type":"exact"}],"termid":"GO:0033558","terms_by_termid":{"GO:0004407":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0033558":null,"GO:0034739":null,"GO:0046969":null,"GO:0046970":null,"GO:0097372":null,"GO:0140765":null,"GO:0140937":null,"GO:0141222":null,"GO:0180032":null,"GO:0180033":null}}


id: GO:0016339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","synonyms":[{"name":"calcium-dependent cell adhesion molecule activity","type":"related"}],"termid":"GO:0016339"}


id: MONDO:0025376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An insect-borne reovirus infection of horses, mules and donkeys in Africa and the Middle East; characterized by pulmonary edema, cardiac involvement, and edema of the head and neck.","definition_xrefs":["MESH:D000355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"Reoviridae infectious disease, non-human animal","termid":"MONDO:0700095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"African horse sickness","synonyms":[{"name":"African Horsesickness","type":"related"},{"name":"African Horsesicknesses","type":"related"},{"name":"African horse Sicknesses","type":"related"},{"name":"Horsesickness, African","type":"related"},{"name":"Horsesicknesses, African","type":"related"},{"name":"Plagues, equine","type":"related"},{"name":"Sicknesses, African horse","type":"related"},{"name":"equine Plagues","type":"related"},{"name":"equine plague","type":"related"},{"name":"horse Sicknesses, African","type":"related"},{"name":"horse sickness, African","type":"related"},{"name":"plague, equine","type":"related"},{"name":"sickness, African horse","type":"related"}],"termid":"MONDO:0025376","xrefs":{"Monarch":{"xref_id":"0025376"}}}


id: GO:0009068
data:
  {"annotated_genes":["SJAG_00714","SJAG_02450","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[93404,76762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_00830":null,"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"aspartate family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"aspartate family amino acid breakdown","type":"exact"},{"name":"aspartate family amino acid catabolism","type":"exact"},{"name":"aspartate family amino acid degradation","type":"exact"}],"termid":"GO:0009068","terms_by_termid":{"GO:0006533":null,"GO:0006567":null}}


id: GO:0071570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cement gland over time, from its formation to the mature structure. The cement gland is a simple mucus-secreting organ positioned at the anterior of amphibious embryos. The cement gland attaches the newly hatched embryo to a support before the hatchling can swim well or feed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cement gland development","termid":"GO:0071570"}


id: PBO:0034237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_taxon","termid":"PBO:0034237"}


id: PBO:0004199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0A (p40)","termid":"PBO:0004199"}


id: PBO:0017031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GEMIN7 ortholog","termid":"PBO:0017031"}


id: PBO:0088807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein Pof11","termid":"PBO:0088807"}


id: PBO:0040763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain enriched guanylate kinase associated","termid":"PBO:0040763"}


id: PBO:0034342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-distributary_of","termid":"PBO:0034342"}


id: FYPO:0008287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1-chloro-2,4-dinitrobenzene (CDNB). Cells stop growing (and may die) at a concentration of 1-chloro-2,4-dinitrobenzene that allows wild type cells to grow.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to 1-chloro-2,4-dinitrobenzene","termid":"FYPO:0008287"}


id: PBO:0111649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex and Lid2 complex subunit Ash2-trithorax family","termid":"PBO:0111649"}


id: FYPO:0003846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to acetone.","definition_xrefs":["PMID:24727291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores sensitive to acetone","termid":"FYPO:0003846"}


id: PBO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin ligase complex subunit, involved in proteasome-dependent catabolite inactivation of FBPase (predicted)","termid":"PBO:0003169"}


id: FYPO:0006826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4-fluorophenylalanine. Cells stop growing (and may die) at a concentration of 4-fluorophenylalanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to 4-fluorophenylalanine","synonyms":[{"name":"hypersensitive to 4-fluorophenylalanine","type":"exact"},{"name":"sensitive to 4-fluorophenylalanine during mitotic cell cycle","type":"related"},{"name":"sensitive to 4-fluorophenylalanine during vegetative growth","type":"exact"},{"name":"sensitive to p-fluoro-phenylalanine","type":"exact"},{"name":"sensitive to p-fluorophenylalanine","type":"exact"}],"termid":"FYPO:0006826"}


id: PBO:0050883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDNK gluconokinase","termid":"PBO:0050883"}


id: PBO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak1","termid":"PBO:0002650"}


id: MONDO:0014809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary neoplastic syndrome in which the cause of the disease is a mutation in the DDX41 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX41-related hematologic malignancy predisposition syndrome","secondary_identifiers":["UMLS:C4225174","MEDGEN:895780","GARD:17899","Orphanet:488647","OMIM:616871"],"synonyms":[{"name":"DDX41 hereditary neoplastic syndrome","type":"exact"},{"name":"DDX41-related hematologic malignancy predisposition syndrome","type":"exact"},{"name":"MPLPF","type":"exact"},{"name":"hereditary neoplastic syndrome caused by mutation in DDX41","type":"exact"},{"name":"myeloproliferative/lymphoproliferative neoplasms, familial (multiple types), susceptibility to","type":"exact"},{"name":"susceptibility to familial (multiple types) myeloproliferative/lymphoproliferative neoplasms","type":"related"}],"termid":"MONDO:0014809","xrefs":{"Monarch":{"xref_id":"0014809"}}}


id: PBO:0067062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 87, pseudogene","termid":"PBO:0067062"}


id: MONDO:0000582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunoglobulin alpha deficiency (obsolete MONDO:0000582)","termid":"MONDO:0000582","xrefs":{"Monarch":{"xref_id":"0000582"}}}


id: PBO:0059425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRS2 pseudogene 2","termid":"PBO:0059425"}


id: GO:0102256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: neoagarohexaose + H2O = 3,6-anhydro-alpha-L-galactopyranose + agaropentaose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete neoagarohexaose 1,3-alpha-3,6-anhydro-L-galactosidase activity (obsolete GO:0102256)","termid":"GO:0102256"}


id: PBO:0075822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcospan","termid":"PBO:0075822"}


id: GO:0018329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient adenylylation of lysine to form N6-(phospho-5'-adenosine)-L-lysine, found in the active site of DNA ligase and RNA ligase.","definition_xrefs":["RESID:AA0227"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via N6-(phospho-5'-adenosine)-L-lysine (obsolete GO:0018329)","termid":"GO:0018329"}


id: PBO:0024821
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GEN1","termid":"PBO:0024821"}


id: PBO:0086647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion","termid":"PBO:0086647"}


id: GO:0048045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-pentaprenyl diphosphate + isopentenyl diphosphate = all-trans-hexaprenyl diphosphate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-pentaprenyltranstransferase activity (obsolete GO:0048045)","synonyms":[{"name":"all-trans-hexaprenyl-diphosphate synthase activity","type":"related"},{"name":"all-trans-pentaprenyl-diphosphate:isopentenyl-diphosphate pentaprenyltranstransferase activity","type":"related"},{"name":"hexaprenyl diphosphate synthase activity","type":"related"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"exact"}],"termid":"GO:0048045"}


id: MONDO:0002521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple symmetrical lipomatosis (obsolete MONDO:0002521)","termid":"MONDO:0002521","xrefs":{"Monarch":{"xref_id":"0002521"}}}


id: PBO:0042127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 201","termid":"PBO:0042127"}


id: PBO:0030896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transport_phenotype_during_vegetative_growth","termid":"PBO:0030896"}


id: PBO:0072380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 6","termid":"PBO:0072380"}


id: SO:0000593
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.","direct_ancestors":[{"relation_name":"derives_from","term_name":"C_D_box_snoRNA_primary_transcript","termid":"SO:0000595"},{"relation_name":"is_a","term_name":"snoRNA","termid":"SO:0000275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA","synonyms":[{"name":"C D box snoRNA","type":"exact"},{"name":"C/D box snoRNA","type":"exact"},{"name":"SNORD","type":"exact"},{"name":"box C/D snoRNA","type":"exact"}],"termid":"SO:0000593"}


id: GO:0032032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin I heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin tail binding","termid":"GO:0032029"},{"relation_name":"is_a","term_name":"myosin I heavy chain binding","termid":"GO:0032037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"myosin I tail binding","termid":"GO:0032032"}


id: PBO:0088216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTA-like protein","termid":"PBO:0088216"}


id: PBO:0087562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Snt2C complex, RING finger ubiquitin ligase (E3); physically associates with Ecm5p and Rpd3p; along with Ecm5p, recruits Rpd3p to small number of promoters; colocalizes with Ecm5p, independently of Rpd3p, to promoters of stress response genes upon oxidative stress; involved in ubiquitination, degradation of excess histones; interacts with Ubc4p; role in regulating genes encoding amine transporters; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087562"}


id: GO:0031333
data:
  {"annotated_genes":["SJAG_01993","SJAG_02700","SJAG_04638","SJAG_01894","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87468,98093,113451,91527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[117073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex assembly.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of protein-containing complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein complex assembly","type":"exact"},{"name":"down-regulation of protein complex assembly","type":"exact"},{"name":"downregulation of protein complex assembly","type":"exact"},{"name":"inhibition of protein complex assembly","type":"narrow"},{"name":"negative regulation of protein complex assembly","type":"related"}],"termid":"GO:0031333","terms_by_termid":{"GO:0051016":null,"GO:1905560":null}}


id: PBO:0069164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 416, pseudogene","termid":"PBO:0069164"}


id: PBO:0030795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0030795"}


id: FYPO:0000877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"decreased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000877"}


id: FYPO:0007373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of histones in silent mating-type cassettes is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abnormal histone methylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal histone methylation at silent mating-type cassette during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007373"}


id: GO:0031634
data:
  {"annotated_genes":["SJAG_04855","SJAG_00073","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990943"},{"annotations":[101465,114159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[101466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"}]},"cv_name":"molecular_function","definition":"Binding to replication fork barriers, sites that inhibit the progress of replication forks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"replication fork barrier binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031634","terms_by_termid":{"GO:0043110":null,"GO:0110035":null,"GO:1990943":null}}


id: PBO:0076564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3E","termid":"PBO:0076564"}


id: FYPO:0002633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTTP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular dTTP level","synonyms":[{"name":"increased cellular dTTP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dTTP level during vegetative growth","type":"exact"},{"name":"increased dTTP accumulation","type":"related"}],"termid":"FYPO:0002633"}


id: GO:0072565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular component organization process in which microparticles bud off from an endothelial cell.","definition_xrefs":["GOC:BHF","PMID:16373184","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial microparticle formation","synonyms":[{"name":"endothelial microparticle generation","type":"exact"},{"name":"endothelial microparticle release","type":"exact"}],"termid":"GO:0072565"}


id: GO:1901179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of spheroidene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"spheroidene metabolic process","termid":"GO:1901178"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"spheroidene catabolic process","synonyms":[{"name":"spheroidene breakdown","type":"exact"},{"name":"spheroidene catabolism","type":"exact"},{"name":"spheroidene degradation","type":"exact"}],"termid":"GO:1901179"}


id: GO:0005055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a laminin, a glycoprotein that constitutes the majority of proteins in the basement membrane, to initiate a change in cell activity.","definition_xrefs":["GOC:ai","PMID:2970671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0098631","GO:0003674"],"is_obsolete":false,"name":"laminin receptor activity","termid":"GO:0005055"}


id: GO:0004560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-L-fucoside + H2O = an alcohol + L-fucose.","definition_xrefs":["EC:3.2.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosidase activity","termid":"GO:0015928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"alpha-L-fucosidase activity","secondary_identifiers":["MetaCyc:ALPHA-L-FUCOSIDASE-RXN","RHEA:12288","Reactome:R-HSA-5693807"],"synonyms":[{"name":"alpha-L-fucoside fucohydrolase activity","type":"related"},{"name":"alpha-fucosidase activity","type":"related"}],"termid":"GO:0004560"}


id: MONDO:0011159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the COL11A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 13","secondary_identifiers":["OMIM:601868","DOID:0110545","MEDGEN:400917","GARD:18108","MESH:C566612","UMLS:C1866095"],"synonyms":[{"name":"COL11A2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"DFNA13","type":"narrow"},{"name":"autosomal dominant deafness 13","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 13","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in COL11A2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 13","type":"narrow"},{"name":"deafness, autosomal dominant 13","type":"narrow"},{"name":"deafness, autosomal dominant type 13","type":"narrow"}],"termid":"MONDO:0011159","xrefs":{"Monarch":{"xref_id":"0011159"}}}


id: MONDO:1011205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Van den Ende-Gupta syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Van den Ende-Gupta syndrome, non-human animal","termid":"MONDO:1010314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Van den Ende-Gupta syndrome, dog","secondary_identifiers":["OMIA:002016-9615"],"termid":"MONDO:1011205","xrefs":{"Monarch":{"xref_id":"1011205"}}}


id: PBO:0028872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_poly(A)_tail_length","termid":"PBO:0028872"}


id: FYPO:0005526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the transport of organelles or other particles along microtubules is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"decreased microtubule-based movement during vegetative growth","termid":"FYPO:0005462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased transport along microtubule during vegetative growth","synonyms":[{"name":"decreased establishment of localization by movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased microtubule-based transport during vegetative growth","type":"broad"},{"name":"decreased movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased transport along microtubule during mitotic cell cycle","type":"related"},{"name":"reduced transport along microtubule during vegetative growth","type":"exact"}],"termid":"FYPO:0005526"}


id: PBO:0065472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 10 pseudogene 3","termid":"PBO:0065472"}


id: PBO:0061902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid related nociceptin receptor 1","termid":"PBO:0061902"}


id: PR:O94396
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus1 gene.","definition_xrefs":["UniProtKB:O94396","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.03","synonyms":[{"name":"Spom972h-pus1","type":"exact"},{"name":"tRNA pseudouridylate synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-uridine isomerase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94396"}


id: MONDO:0007006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the ulnar nerve from its origin in the brachial plexus to its termination in the hand. Clinical manifestations may include paresis or paralysis of wrist flexion, finger flexion, thumb adduction, finger abduction, and finger adduction. Sensation over the medial palm, fifth finger, and ulnar aspect of the ring finger may also be impaired. Common sites of injury include the axilla, cubital tunnel at the elbow, and Guyon's canal at the wrist. (From Joynt, Clinical Neurology, 1995, Ch51 pp43-5)","definition_xrefs":["MESH:D020424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"ulnar neuropathy","secondary_identifiers":["MEDGEN:57596","DOID:4613","EFO:1001224","SCTID:359837005","UMLS:C0154743"],"synonyms":[{"name":"mononeuropathy of ulnar nerve","type":"exact"},{"name":"ulnar nerve mononeuropathy","type":"exact"},{"name":"ulnar neuropathy","type":"exact"},{"name":"ulnar neuropathy (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0007006","xrefs":{"Monarch":{"xref_id":"0007006"}}}


id: PBO:0055134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2553","termid":"PBO:0055134"}


id: MONDO:0017201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spasmus nutans (SN) is a rare eye disease characterized by the clinical triad of asymmetric and pendular nystagmus, head nodding, and torticollis.","definition_xrefs":["Orphanet:279882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Spasmus nutans","secondary_identifiers":["HP:0010533","MedDRA:10059593","GARD:21058","icd11.foundation:1868433558","MEDGEN:154280","SCTID:400948003","UMLS:C0546878"],"synonyms":[{"name":"Spasmus nutans","type":"exact"},{"name":"Spasmus nutans (disease)","type":"exact"}],"termid":"MONDO:0017201","xrefs":{"Monarch":{"xref_id":"0017201"}}}


id: PBO:0042965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3","termid":"PBO:0042965"}


id: PBO:0058065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4284","termid":"PBO:0058065"}


id: FYPO:0005957
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118580],"is_not":false,"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["GO:0006470","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation during vegetative growth","termid":"FYPO:0005956"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein dephosphorylation during vegetative growth","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"synonyms":[{"name":"decreased protein dephosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein dephosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005957","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: SO:0000942
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An integration/excision site of a phage chromosome at which a recombinase acts to insert the phage DNA at a cognate integration/excision site on a bacterial chromosome.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"phage_sequence","termid":"SO:0001042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attP_site","synonyms":[{"name":"attP site","type":"exact"}],"termid":"SO:0000942"}


id: PBO:0030102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_citrulline_level","termid":"PBO:0030102"}


id: MONDO:0014760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"TFRC-related combined immunodeficiency","secondary_identifiers":["DOID:0111948","MEDGEN:1799556","Orphanet:476113","GARD:17849","UMLS:C5568133","OMIM:616740"],"synonyms":[{"name":"CID due to TFRC deficiency","type":"exact"},{"name":"IMD46","type":"exact"},{"name":"combined immunodeficiency due to TFRC deficiency","type":"related"},{"name":"immunodeficiency 46","type":"exact"},{"name":"immunodeficiency type 46","type":"exact"}],"termid":"MONDO:0014760","xrefs":{"Monarch":{"xref_id":"0014760"}}}


id: PBO:0070140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 54 pseudogene","termid":"PBO:0070140"}


id: FYPO:0005591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lysophosphatidylcholine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular lysophosphatidylcholine level","synonyms":[{"name":"decreased cellular lysophosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lysophosphatidylcholine level during vegetative growth","type":"exact"},{"name":"decreased lysophosphatidylcholine accumulation","type":"related"},{"name":"reduced cellular lysophosphatidylcholine level","type":"exact"}],"termid":"FYPO:0005591"}


id: GO:0000479
data:
  {"annotated_genes":["SJAG_04524","SJAG_03425","SJAG_01551","SJAG_03796","SJAG_01581","SJAG_06613","SJAG_04916","SJAG_01623","SJAG_00965","SJAG_03789","SJAG_02250","SJAG_01476","SJAG_02553","SJAG_03234","SJAG_00772","SJAG_02644","SJAG_03952","SJAG_02547","SJAG_00897","SJAG_02275","SJAG_04582","SJAG_00955","SJAG_03846","SJAG_00344","SJAG_02374","SJAG_04224","SJAG_04174"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87558,93526,107854],"is_not":false,"summary":null,"term":"GO:0000479"},{"annotations":[90895,103290,117682,94153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000448"},{"annotations":[99008,106777,114329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000480"},{"annotations":[103725,92610,93907,98685,114441,95984,102301,99009,95692,114529,106778,108154,104819,104820,112620,103941,107106,117716,104723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000447"},{"annotations":[104724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[106779,114330,99010,108155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with three genes, in this order, are produced in the nuclei of many eukaryotic species, including S. cerevisiae.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00344":null,"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000479","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000461":null,"GO:0000472":null,"GO:0000479":null,"GO:0000480":null}}


id: PATO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of male and external sexual characteristics of female.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male pseudohermaphrodite","termid":"PATO:0001828"}


id: PBO:0040735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 1","termid":"PBO:0040735"}


id: PBO:0003033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase (predicted)","termid":"PBO:0003033"}


id: GO:0035143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the caudal fin are generated and organized. A caudal fin is an unpaired medial fin mounted at the caudal end of the fish, and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"caudal fin development","termid":"GO:0033336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin morphogenesis","termid":"GO:0035143"}


id: PBO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended Fer/CIP4 (EFC) domain protein Cdc15","termid":"PBO:0000954"}


id: PBO:0091798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-Pro dipeptidase","termid":"PBO:0091798"}


id: PBO:0058895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12113","termid":"PBO:0058895"}


id: PBO:0061735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin like 2","termid":"PBO:0061735"}


id: PBO:0070779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 9","termid":"PBO:0070779"}


id: PBO:0041489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 4","termid":"PBO:0041489"}


id: PBO:0046719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 5","termid":"PBO:0046719"}


id: FYPO:0002413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable curved vegetative cell population (obsolete FYPO:0002413)","synonyms":[{"name":"inviable curved vegetative cell population","type":"exact"},{"name":"population of inviable curved cells","type":"exact"}],"termid":"FYPO:0002413"}


id: PBO:0061748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 1 pseudogene 1","termid":"PBO:0061748"}


id: PBO:0053993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1312","termid":"PBO:0053993"}


id: PBO:0064597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox associating factor 3","termid":"PBO:0064597"}


id: PBO:0082979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic tryptophanyl-tRNA synthetase; aminoacylates tryptophanyl-tRNA; human homolog WARS can complement yeast null mutant","termid":"PBO:0082979"}


id: SO:0001416
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A flanking region located five prime of a specific region.","definition_xrefs":["SO:chado"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanking_region","termid":"SO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_flanking_region","synonyms":[{"name":"5' flanking region","type":"related"},{"name":"five prime flanking region","type":"exact"}],"termid":"SO:0001416"}


id: RO:HOM0000074
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Iterative homology that involves two structures, one of which originated as a duplicate of the other and co-opted the expression of patterning genes of the ancestral structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homocracy_relationship_with","termid":"RO:HOM0000003"},{"relation_name":"is_a","term_name":"in_iterative_homology_relationship_with","termid":"RO:HOM0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paramorphism_relationship_with","synonyms":[{"name":"axis paramorphism","type":"related"}],"termid":"RO:HOM0000074"}


id: GO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + [ribulose-1,5-bisphosphate carboxylase]-lysine = S-adenosyl-L-homocysteine + [ribulose-1,5-bisphosphate carboxylase]-N6-methyl-L-lysine.","definition_xrefs":["EC:2.1.1.127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity","secondary_identifiers":["RHEA:50996","MetaCyc:2.1.1.127-RXN"],"synonyms":[{"name":"RuBisCO LSMT activity","type":"related"},{"name":"RuBisCO methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3-phospho-D-glycerate-carboxy-lyase (dimerizing)-lysine 6-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3-phospho-D-glycerate-carboxy-lyase (dimerizing)-lysine N6-methyltransferase activity","type":"related"},{"name":"ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit epsilonN-methyltransferase activity","type":"related"},{"name":"ribulose-bisphosphate carboxylase-lysine N-methyltransferase activity","type":"related"},{"name":"ribulose-bisphosphate-carboxylase/oxygenase N-methyltransferase activity","type":"related"}],"termid":"GO:0030785"}


id: PBO:0069361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 621, pseudogene","termid":"PBO:0069361"}


id: MONDO:0001651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare squamous cell carcinoma that arises from the scrotum. It has been associated with exposure to environmental and industrial carcinogens. The prognosis depends on the extent of lymph node involvement.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scrotal carcinoma","termid":"MONDO:0002650"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"scrotum squamous cell carcinoma","secondary_identifiers":["DOID:13159","MEDGEN:138101","UMLS:C0349551","SCTID:276860003","NCIT:C4643"],"synonyms":[{"name":"scrotal squamous cell carcinoma","type":"exact"},{"name":"scrotum squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of scrotum","type":"related"},{"name":"squamous cell carcinoma of the scrotum","type":"exact"}],"termid":"MONDO:0001651","xrefs":{"Monarch":{"xref_id":"0001651"}}}


id: PBO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mating_projection_absent","termid":"PBO:0031838"}


id: PBO:0067911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 213","termid":"PBO:0067911"}


id: MONDO:0958192
data:
  {"annotated_genes":["SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85626],"is_not":false,"summary":null,"term":"MONDO:0958192"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycine encephalopathy","termid":"MONDO:0011612"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"glycine encephalopathy 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830559","MEDGEN:1841195","OMIM:620398"],"termid":"MONDO:0958192","terms_by_termid":{"MONDO:0958192":null},"xrefs":{"Monarch":{"xref_id":"0958192"}}}


id: PR:O94686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L43-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.02c","synonyms":[{"name":"L37B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl4302","type":"exact"}],"termid":"PR:O94686"}


id: GO:0098017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral capsid that comprises the most common capsomere type. For example, in a T=3 icosahedral capsid, which is composed of 12 pentameric and 20 hexameric capsomeres, the hexameric capsomeres are major subunits.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capsomere","termid":"GO:0046727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, major subunit","synonyms":[{"name":"major capsomere","type":"exact"},{"name":"major head protein","type":"related"}],"termid":"GO:0098017"}


id: FYPO:0000232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the actomyosin contractile ring splits upon initiation of contraction during anaphase B, resulting in the formation of a primary ring that undergoes constriction and a secondary ring that does not constrict.","definition_xrefs":["PMID:18272786","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring morphology","termid":"FYPO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"split actomyosin contractile ring","synonyms":[{"name":"abnormal contractile ring contraction with contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting upon contraction","type":"related"},{"name":"cytokinesis defects, splitting of the actinomyosin ring","type":"related"},{"name":"split actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"split actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"split cytokinetic contractile ring","type":"exact"},{"name":"split mitotic contractile ring","type":"exact"}],"termid":"FYPO:0000232"}


id: SO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of a chloroplast DNA sample.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chloroplast_DNA","termid":"SO:0001033"},{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_DNA_read","synonyms":[{"name":"chloroplast DNA read","type":"exact"}],"termid":"SO:0001930"}


id: GO:0055124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the neural plate before the appropriate time.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete premature neural plate formation (obsolete GO:0055124)","synonyms":[{"name":"premature neural plate formation","type":"exact"}],"termid":"GO:0055124"}


id: GO:0102627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + parthenolide + reduced [NADPH--hemoprotein reductase] = 3beta-hydroxyparthenolide + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:61328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"parthenolide 3beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15532"],"termid":"GO:0102627"}


id: PBO:0088643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein Bcd1","termid":"PBO:0088643"}


id: PBO:0039454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 2","termid":"PBO:0039454"}


id: GO:0036155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of an acylglycerol, through sequential deacylation and re-acylation reactions, to generate an acylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"acylglycerol acyl-chain remodeling","synonyms":[{"name":"acylglycerol acyl-chain remodelling","type":"exact"},{"name":"glyceride acyl-chain remodeling","type":"exact"}],"termid":"GO:0036155"}


id: FYPO:0001870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is normal (i.e. indistinguishable from wild type). Centromere-kinetochore complexes normally cluster near the old spindle pole body during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal centromere clustering at nuclear periphery","synonyms":[{"name":"normal centromere clustering at SPB","type":"related"},{"name":"normal centromere clustering at nuclear periphery during interphase of mitotic cell cycle","type":"exact"},{"name":"normal centromere clustering at nuclear periphery during mitotic cell cycle","type":"exact"},{"name":"normal centromere clustering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal centromere clustering at spindle pole body","type":"related"},{"name":"normal centromere-SPB clustering","type":"related"},{"name":"normal kinetochore clustering at SPB","type":"related"},{"name":"normal kinetochore clustering at spindle pole body","type":"related"},{"name":"normal kinetochore localization at spindle pole body","type":"related"}],"termid":"FYPO:0001870"}


id: PR:Q10060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mso1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.05c","synonyms":[{"name":"Spom972h-mso1","type":"exact"}],"termid":"PR:Q10060"}


id: PBO:0034585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_vegetative_cell_population_growth_followed_by_return_to_normal_growth_rate","termid":"PBO:0034585"}


id: FYPO:0006155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mating mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Mating genes are normally transcribed during conjugation with cellular fusion (i.e. mating).","definition_xrefs":["PMID:19056896","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of mating gene mRNA during vegetative growth","synonyms":[{"name":"increased level of conjugation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of mating gene RNA during vegetative growth","type":"exact"},{"name":"increased level of mating gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of mating gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of mating with cellular fusion gene mRNA during vegetative growth","type":"exact"},{"name":"increased mating gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006155"}


id: GO:0010541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin from the base towards the apex of an organ, including the shoot, leaf, primary root, or lateral root.","definition_xrefs":["PMID:10677441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"acropetal auxin transport","termid":"GO:0010541"}


id: PBO:0036500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Urm1 (predicted)","termid":"PBO:0036500"}


id: PBO:0026717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell","termid":"PBO:0026717"}


id: MONDO:0013730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immune system disorder that occurs after allogeneic hematopoietic stem cell transplant and is a reaction of donor immune cells against host tissues. Activated donor T cells damage host epithelial cells after an inflammatory cascade that begins with the preparative regimen.","definition_xrefs":["Orphanet:39812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"disease related to hematopoietic stem cell transplant","termid":"MONDO:0700222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"graft versus host disease","secondary_identifiers":["UMLS:C0018133","MESH:D006086","ICD9:279.50","MEDGEN:9082","MedDRA:10018651","NCIT:C3063","DOID:0081267","NORD:1203","icd11.foundation:437372167","GARD:16642","SCTID:234646005"],"synonyms":[{"name":"GVH","type":"exact"},{"name":"GVHD","type":"exact"},{"name":"GvHD","type":"exact"},{"name":"disease, graft-versus-host","type":"exact"},{"name":"disease, graft-vs-host","type":"exact"},{"name":"disease, homologous wasting","type":"related"},{"name":"disease, runt","type":"related"},{"name":"diseases, graft-versus-host","type":"exact"},{"name":"diseases, graft-vs-host","type":"exact"},{"name":"graft versus host disease","type":"exact"},{"name":"graft vs host disease","type":"exact"},{"name":"graft vs. host disease","type":"exact"},{"name":"graft-VS-host diseases","type":"related"},{"name":"graft-versus-host disease","type":"exact"},{"name":"graft-versus-host disease, resistance to","type":"related"},{"name":"graft-versus-host disease, susceptibility to","type":"related"},{"name":"graft-versus-host diseases","type":"related"},{"name":"graft-versus-host-disease","type":"exact"},{"name":"graft-vs-host disease","type":"exact"},{"name":"homologous wasting disease","type":"related"},{"name":"runt disease","type":"exact"}],"termid":"MONDO:0013730","xrefs":{"Monarch":{"xref_id":"0013730"}}}


id: MONDO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumor of the kidney characterized by the absence of nuclear anaplasia.","definition_xrefs":["NCIT:C6951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney Wilms tumor","termid":"MONDO:0019004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"nonanaplastic kidney Wilms tumor","secondary_identifiers":["MEDGEN:277434","UMLS:C1335062"],"synonyms":[{"name":"nonanaplastic kidney Wilms tumor","type":"exact"},{"name":"nonanaplastic renal Wilm's tumor","type":"exact"},{"name":"nonanaplastic renal Wilm's tumour","type":"exact"},{"name":"nonanaplastic renal Wilms tumor","type":"exact"},{"name":"nonanaplastic renal Wilms tumour","type":"exact"},{"name":"nonanaplastic renal Wilms' tumor","type":"exact"},{"name":"nonanaplastic renal Wilms' tumour","type":"exact"}],"termid":"MONDO:0003316","xrefs":{"Monarch":{"xref_id":"0003316"}}}


id: GO:0070944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of bacterium","synonyms":[{"name":"neutrophil mediated killing of bacterium","type":"exact"}],"termid":"GO:0070944"}


id: PBO:0074912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 83A","termid":"PBO:0074912"}


id: PBO:0090261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex catalytic subunit","termid":"PBO:0090261"}


id: PBO:0049571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 8","termid":"PBO:0049571"}


id: MONDO:0000043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypomagnesemia (obsolete MONDO:0000043)","termid":"MONDO:0000043","xrefs":{"Monarch":{"xref_id":"0000043"}}}


id: PBO:0042630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 5 pseudogene","termid":"PBO:0042630"}


id: MONDO:1010020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Supravalvular aortic stenosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supravalvular aortic stenosis, non-human animal","secondary_identifiers":["OMIA:000960"],"termid":"MONDO:1010020","xrefs":{"Monarch":{"xref_id":"1010020"}}}


id: PBO:0056193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA4 antisense RNA 1","termid":"PBO:0056193"}


id: GO:1900949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isoprene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of isoprene metabolic process","termid":"GO:1900946"},{"relation_name":"is_a","term_name":"regulation of isoprene biosynthetic process","termid":"GO:1900947"},{"relation_name":"positively_regulates","term_name":"isoprene biosynthetic process","termid":"GO:0043612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isoprene biosynthetic process","synonyms":[{"name":"activation of 2-methyl-1,3-butadiene biosynthesis","type":"narrow"},{"name":"activation of 2-methyl-1,3-butadiene biosynthetic process","type":"narrow"},{"name":"activation of hemiterpene biosynthesis","type":"narrow"},{"name":"activation of hemiterpene biosynthetic process","type":"narrow"},{"name":"activation of isoprene biosynthetic process","type":"narrow"},{"name":"positive regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"positive regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"positive regulation of hemiterpene biosynthesis","type":"exact"},{"name":"positive regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"up regulation of hemiterpene biosynthesis","type":"exact"},{"name":"up regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up regulation of isoprene biosynthetic process","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"up-regulation of hemiterpene biosynthesis","type":"exact"},{"name":"up-regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up-regulation of isoprene biosynthetic process","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"upregulation of hemiterpene biosynthesis","type":"exact"},{"name":"upregulation of hemiterpene biosynthetic process","type":"exact"},{"name":"upregulation of isoprene biosynthetic process","type":"exact"}],"termid":"GO:1900949"}


id: MONDO:0000940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with protozoa of the genus trypanosoma.","definition_xrefs":["MESH:D014352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trypanosomiasis","secondary_identifiers":["ICD9:086","ICD9:086.9","NANDO:2200774","ICD10CM:B56","DOID:10113","MEDGEN:52872","SCTID:78940002","UMLS:C0041227"],"synonyms":[{"name":"Trypanosoma caused disease or disorder","type":"exact"},{"name":"Trypanosoma disease or disorder","type":"exact"},{"name":"Trypanosoma infectious disease","type":"exact"},{"name":"Trypanosomiases","type":"related"}],"termid":"MONDO:0000940","xrefs":{"Monarch":{"xref_id":"0000940"}}}


id: PBO:0061688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 160","termid":"PBO:0061688"}


id: GO:0051440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of ubiquitin ligase activity during the meiotic cell cycle.","definition_xrefs":["GOC:tb","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ubiquitin-protein ligase activity involved in meiotic cell cycle (obsolete GO:0051440)","synonyms":[{"name":"meiotic APC regulator","type":"narrow"},{"name":"meiotic SCF complex regulator","type":"narrow"},{"name":"meiotic anaphase-promoting complex regulator","type":"narrow"},{"name":"meiotic ubiquitin ligase regulator","type":"related"},{"name":"meiotic ubiquitin-protein ligase regulator","type":"related"},{"name":"regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"regulation of ubiquitin-protein ligase activity during meiotic cell cycle","type":"related"}],"termid":"GO:0051440"}


id: MONDO:1011964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic congenital chondrodystrophy, non-human animal","secondary_identifiers":["OMIA:001814"],"synonyms":[{"name":"congenital chondrodystrophy of unknown origin, non-human animal","type":"exact"}],"termid":"MONDO:1011964","xrefs":{"Monarch":{"xref_id":"1011964"}}}


id: MONDO:0006728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Inflammation of an intervertebral disk or disk space which may lead to disk erosion. Until recently, discitis has been defined as a nonbacterial inflammation and has been attributed to aseptic processes (e.g., chemical reaction to an injected substance). However, recent studies provide evidence that infection may be the initial cause, but perhaps not the promoter, of most cases of discitis. Discitis has been diagnosed in patients following discography, myelography, lumbar puncture, paravertebral injection, and obstetrical epidural anesthesia. Discitis following chemonucleolysis (especially with chymopapain) is attributed to chemical reaction by some and to introduction of microorganisms by others.","definition_xrefs":["MESH:D015299"],"gene_count":0,"genotype_count":0,"name":"obsolete discitis (obsolete MONDO:0006728)","secondary_identifiers":["SCTID:2304001","ICD9:722.90","DOID:10986"],"synonyms":[{"name":"inflammation of intervertebral disk","type":"exact"},{"name":"intervertebral disk inflammation","type":"exact"}],"termid":"MONDO:0006728","xrefs":{"Monarch":{"xref_id":"0006728"}}}


id: PBO:0114604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytic adaptor, F-BAR domain protein Syp1","termid":"PBO:0114604"}


id: PBO:0003467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc4","termid":"PBO:0003467"}


id: GO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs), to facilitate the aggregation, arrangement and bonding together of proteins on RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.","definition_xrefs":["PMID:16858867","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly (obsolete GO:0001129)","synonyms":[{"name":"TATA-binding protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly","type":"narrow"},{"name":"TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly","type":"exact"}],"termid":"GO:0001129"}


id: FYPO:0005697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the spindle pole body (SPB) does not occur during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the SPB.","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cytoplasmic interphase microtubule nucleation","termid":"FYPO:0004766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished cytoplasmic interphase microtubule nucleation from spindle pole body","synonyms":[{"name":"abolished cytoplasmic interphase microtubule nucleation from SPB","type":"exact"},{"name":"abolished cytoplasmic interphase microtubule nucleation from spindle pole body during vegetative growth","type":"exact"},{"name":"abolished cytoplasmic microtubule nucleation by spindle pole body","type":"exact"},{"name":"abolished cytoplasmic microtubule nucleation from spindle pole body during interphase of mitotic cell cycle","type":"exact"},{"name":"abolished cytoplasmic microtubule nucleation from spindle pole body during mitotic interphase","type":"exact"},{"name":"abolished interphase microtubule nucleation from spindle pole body","type":"exact"},{"name":"cytoplasmic microtubule nucleation from spindle pole body abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0005697"}


id: MONDO:0018598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Neonatal adrenoleukodystrophy (NALD) is the variant of intermediate severity of the PBD-Zellweger syndrome spectrum (PBD-ZSS), charcterized by hypotonia, leukodystrophy, and vision and sensorineural hearing deficiencies. Phenotypic overlap is seen between NALD and infantile Refsum disease (IRD).","definition_xrefs":["Orphanet:44"],"gene_count":0,"genotype_count":0,"name":"obsolete neonatal adrenoleukodystrophy (obsolete MONDO:0018598)","secondary_identifiers":["ICD10CM:E71.511","NANDO:1200761","NCIT:C99251","SCTID:238061001"],"synonyms":[{"name":"NALD","type":"exact"},{"name":"adrenoleukodystrophy autosomal neonatal form","type":"related"}],"termid":"MONDO:0018598","xrefs":{"Monarch":{"xref_id":"0018598"}}}


id: FYPO:0003205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a primary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"decreased primary cell septum thickness","synonyms":[{"name":"decreased primary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased primary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased primary septum thickness","type":"exact"},{"name":"reduced primary cell septum thickness","type":"exact"},{"name":"thin primary septum","type":"exact"}],"termid":"FYPO:0003205"}


id: MONDO:0011299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodegenerative disease with chorea in which the cause of the disease is a mutation in the PRNP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Huntington disease and related disorders","termid":"MONDO:0000167"},{"relation_name":"excluded_subClassOf","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Huntington disease-like 1","secondary_identifiers":["MEDGEN:355137","Orphanet:157941","UMLS:C1864112","DOID:0090103","MESH:C566398","OMIM:603218","GARD:16985"],"synonyms":[{"name":"HDL1","type":"exact"},{"name":"HLN1","type":"exact"},{"name":"Huntington disease-like 1","type":"exact"},{"name":"Huntington disease-like type 1","type":"exact"},{"name":"Huntington's disease-like 1","type":"related"},{"name":"Huntington-like neurodegenerative disorder 1","type":"exact"},{"name":"Huntington-like neurodegenerative disorder, autosomal dominant","type":"related"},{"name":"PRNP neurodegenerative disease with chorea","type":"exact"},{"name":"autosomal dominant Huntington-like neurodegenerative disorder","type":"exact"},{"name":"early-onset prion disease with prominent psychiatric features","type":"exact"},{"name":"neurodegenerative disease with chorea caused by mutation in PRNP","type":"exact"},{"name":"prion disease, early-onset, with prominent psychiatric features","type":"related"}],"termid":"MONDO:0011299","xrefs":{"Monarch":{"xref_id":"0011299"}}}


id: PBO:0086541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR006C is not an essential gene","termid":"PBO:0086541"}


id: PBO:0089697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, human NT5E family","termid":"PBO:0089697"}


id: MOD:00853
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with two (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled deamidated residue","termid":"MOD:00851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(18)O labeled deamidated residue","termid":"MOD:00853"}


id: GO:1900638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asperfuranone biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asperfuranone biosynthetic process","termid":"GO:1900637"},{"relation_name":"is_a","term_name":"negative regulation of polyketide biosynthetic process","termid":"GO:1900733"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"asperfuranone biosynthetic process","termid":"GO:1900554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of asperfuranone biosynthetic process","synonyms":[{"name":"down regulation of asperfuranone anabolism","type":"exact"},{"name":"down regulation of asperfuranone biosynthesis","type":"exact"},{"name":"down regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"down regulation of asperfuranone formation","type":"exact"},{"name":"down regulation of asperfuranone synthesis","type":"exact"},{"name":"down-regulation of asperfuranone anabolism","type":"exact"},{"name":"down-regulation of asperfuranone biosynthesis","type":"exact"},{"name":"down-regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"down-regulation of asperfuranone formation","type":"exact"},{"name":"down-regulation of asperfuranone synthesis","type":"exact"},{"name":"downregulation of asperfuranone anabolism","type":"exact"},{"name":"downregulation of asperfuranone biosynthesis","type":"exact"},{"name":"downregulation of asperfuranone biosynthetic process","type":"exact"},{"name":"downregulation of asperfuranone formation","type":"exact"},{"name":"downregulation of asperfuranone synthesis","type":"exact"},{"name":"inhibition of asperfuranone anabolism","type":"exact"},{"name":"inhibition of asperfuranone biosynthesis","type":"exact"},{"name":"inhibition of asperfuranone biosynthetic process","type":"narrow"},{"name":"inhibition of asperfuranone formation","type":"exact"},{"name":"inhibition of asperfuranone synthesis","type":"exact"},{"name":"negative regulation of asperfuranone anabolism","type":"exact"},{"name":"negative regulation of asperfuranone biosynthesis","type":"exact"},{"name":"negative regulation of asperfuranone formation","type":"exact"},{"name":"negative regulation of asperfuranone synthesis","type":"exact"}],"termid":"GO:1900638"}


id: PBO:0017935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family (predicted)","termid":"PBO:0017935"}


id: PBO:0045724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 1","termid":"PBO:0045724"}


id: MONDO:1011084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, cattle","secondary_identifiers":["OMIA:001033-9913"],"termid":"MONDO:1011084","xrefs":{"Monarch":{"xref_id":"1011084"}}}


id: PBO:0073572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 5","termid":"PBO:0073572"}


id: GO:0031378
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity, located in a plastid.","definition_xrefs":["PMID:12957385","ISBN:0471331309","GOC:mah","ISBN:0716720094"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid type II fatty acid synthase complex (obsolete GO:0031378)","synonyms":[{"name":"plastid type II FAS complex","type":"exact"},{"name":"plastid type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031378"}


id: PBO:0068535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 138, pseudogene","termid":"PBO:0068535"}


id: MONDO:0043156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome","termid":"MONDO:0005377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome ocular anomalies","secondary_identifiers":["MESH:C536403","UMLS:C2931188","MEDGEN:419736"],"synonyms":[{"name":"Glastre Cochat Bouvier syndrome","type":"related"},{"name":"familial infantile nephrotic syndrome with ocular abnormalities","type":"related"}],"termid":"MONDO:0043156","xrefs":{"Monarch":{"xref_id":"0043156"}}}


id: MONDO:0019512
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016581"},{"annotations":[85828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008542"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of heart development.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of cardiovascular system","termid":"MONDO:0024239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"is_obsolete":false,"name":"congenital heart malformation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:88991","UMLS:C3649636","MEDGEN:1680993","EFO:0005269"],"synonyms":[{"name":"congenital heart malformation","type":"exact"},{"name":"congenital non-syndromic heart malformation","type":"related"},{"name":"disorder of heart development","type":"exact"},{"name":"heart development disease","type":"exact"},{"name":"rare congenital non-syndromic heart malformation","type":"related"}],"termid":"MONDO:0019512","terms_by_termid":{"MONDO:0008542":null,"MONDO:0016581":null},"xrefs":{"Monarch":{"xref_id":"0019512"}}}


id: PBO:0049276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gelsolin","termid":"PBO:0049276"}


id: GO:1904103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["PMID:24892953","GO_REF:0000058","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"}


id: PBO:0085446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of genes in multiple nitrogen degradation pathways; contains DNA binding domain but does not appear to bind the dodecanucleotide sequence present in the promoter region of many genes involved in allantoin catabolism","termid":"PBO:0085446"}


id: PBO:0064066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 100","termid":"PBO:0064066"}


id: PBO:0066053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2C, member of RAS oncogene family","termid":"PBO:0066053"}


id: GO:2000611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid hormone generation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of thyroid hormone generation","termid":"GO:2000609"},{"relation_name":"positively_regulates","term_name":"thyroid hormone generation","termid":"GO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thyroid hormone generation","termid":"GO:2000611"}


id: PBO:0041029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain PHD finger transcription factor","termid":"PBO:0041029"}


id: PBO:0039249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member L2","termid":"PBO:0039249"}


id: MONDO:0019205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The association of amelogenesis imperfecta and a microscopically typical hair dysplasia has been found in several members of a family in two generations. Transmission is X-linked.","definition_xrefs":["Orphanet:79129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichodysplasia-amelogenesis imperfecta syndrome","secondary_identifiers":["UMLS:C4304344","GARD:18943","MEDGEN:930013"],"termid":"MONDO:0019205","xrefs":{"Monarch":{"xref_id":"0019205"}}}


id: PBO:0005608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase Gst1","termid":"PBO:0005608"}


id: GO:0045597
data:
  {"annotated_genes":["SJAG_02169","SJAG_03581","SJAG_02392","SJAG_00514","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93776,89070,95044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[101473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[89937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell differentiation","type":"narrow"},{"name":"stimulation of cell differentiation","type":"narrow"},{"name":"up regulation of cell differentiation","type":"exact"},{"name":"up-regulation of cell differentiation","type":"exact"},{"name":"upregulation of cell differentiation","type":"exact"}],"termid":"GO:0045597","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:1903024":null}}


id: PBO:0058801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7843","termid":"PBO:0058801"}


id: PR:000041293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A core histone that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core histone (Schizosaccharomyces pombe)","synonyms":[{"name":"Spom-coreHistone","type":"exact"}],"termid":"PR:000041293"}


id: GO:0098530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:dph","GOC:tb","GOC:elh","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"positively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of strand invasion","synonyms":[{"name":"positive regulation of D-loop biosynthesis","type":"related"},{"name":"positive regulation of D-loop formation","type":"related"},{"name":"positive regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0098530"}


id: PATO:0005015
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an entity or set of entities in which size increases or decreases along the extent of the entity or set.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tapered size","synonyms":[{"name":"gradient of size","type":"exact"}],"termid":"PATO:0005015"}


id: PBO:0051215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 5-51","termid":"PBO:0051215"}


id: PBO:0076181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 6B member 1","termid":"PBO:0076181"}


id: PBO:0063557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pellino E3 ubiquitin protein ligase 1","termid":"PBO:0063557"}


id: PBO:0035798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0035798"}


id: PBO:0004548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 h3.3","termid":"PBO:0004548"}


id: PBO:0005308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Snx12 (predicted)","termid":"PBO:0005308"}


id: PBO:0070264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U105B small nucleolar","termid":"PBO:0070264"}


id: MONDO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arteriovenous malformation (PAVM) describes an anatomic communication between a pulmonary artery and a pulmonary vein leading to a right to left extracardiac shunt that can be asymptomatic or can lead to varying manifestations such as dyspnea, hemoptysis, and neurological symptoms.","definition_xrefs":["Orphanet:2038"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arteriovenous malformation (obsolete MONDO:0009930)","secondary_identifiers":["NANDO:2200295","NCIT:C99029","OMIM:265140","SCTID:303070000","MedDRA:10037332","MESH:C562404","icd11.foundation:913404991","HP:0006548"],"synonyms":[{"name":"PAVM","type":"exact"},{"name":"arteriovenous fistula of pulmonary vessels","type":"exact"},{"name":"pulmonar arteriovenous aneurysm","type":"related"},{"name":"pulmonary AV fistula","type":"exact"},{"name":"pulmonary arterio-veinous fistula","type":"related"},{"name":"pulmonary arteriovenous fistula","type":"exact"},{"name":"pulmonary arteriovenous fistulas","type":"related"},{"name":"pulmonary arteriovenous malformation","type":"exact"},{"name":"pulmonary arteriovenous malformation (disease)","type":"exact"}],"termid":"MONDO:0009930","xrefs":{"Monarch":{"xref_id":"0009930"}}}


id: GO:1902632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane hyperpolarization.","definition_xrefs":["PMID:23223304","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of membrane hyperpolarization","termid":"GO:1902630"},{"relation_name":"positively_regulates","term_name":"membrane hyperpolarization","termid":"GO:0060081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane hyperpolarization","synonyms":[{"name":"activation of membrane hyperpolarization","type":"narrow"},{"name":"up regulation of membrane hyperpolarization","type":"exact"},{"name":"up-regulation of membrane hyperpolarization","type":"exact"},{"name":"upregulation of membrane hyperpolarization","type":"exact"}],"termid":"GO:1902632"}


id: PBO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase Shk2","termid":"PBO:0000249"}


id: GO:0034016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-cis-icosa-5,8,11,14,17-pentaenoate = (5Z,7E,9E,14Z,17Z)-icosapentaenoate.","definition_xrefs":["RHEA:14889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"polyenoic fatty acid isomerase activity","secondary_identifiers":["MetaCyc:5.3.3.13-RXN","EC:5.3.3.13","KEGG_REACTION:R06502"],"synonyms":[{"name":"(5Z,8Z,11Z,14Z,17Z)-eicosapentaenoate delta8,11-delta7,8-isomerase activity","type":"related"},{"name":"(5Z,8Z,11Z,14Z,17Z)-eicosapentaenoate delta8,11-delta7,9-isomerase (trans-double-bond-forming) activity","type":"related"},{"name":"(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate delta8,11-delta7,9-isomerase (trans-double-bond-forming) activity","type":"related"},{"name":"PFI","type":"related"},{"name":"eicosapentaenoate cis-delta5,8,11,14,17-eicosapentaenoate cis-delta5-trans-delta7,9-cis-delta14,17 isomerase activity","type":"related"}],"termid":"GO:0034016"}


id: GO:1902542
data:
  {"annotated_genes":["SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to mitotic spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:22809626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"regulates","term_name":"protein localization to mitotic spindle pole body","termid":"GO:1902440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to mitotic spindle pole body","type":"exact"}],"termid":"GO:1902542","terms_by_termid":{"GO:1902543":null}}


id: GO:0018748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: iprodione + OH- = 3,5-dichlorophenylcarboximide + N-isopropylcarbamate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete iprodione amidohydrolase activity (obsolete GO:0018748)","termid":"GO:0018748"}


id: PBO:0054225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1607","termid":"PBO:0054225"}


id: PR:O94461
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.21 gene.","definition_xrefs":["UniProtKB:O94461","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase C1687.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.21","synonyms":[{"name":"Spom972h-SPAC1687.21","type":"exact"}],"termid":"PR:O94461"}


id: MONDO:0020858
data:
  {"annotated_genes":["SJAG_03114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85579],"is_not":false,"summary":null,"term":"MONDO:0020858"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 5 (ATP synthase) deficiency nuclear type 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070463","MEDGEN:1648429","OMIM:618120","UMLS:C4748269","GARD:18670"],"synonyms":[{"name":"MC5DN5","type":"exact"},{"name":"MITOCHONDRIAL COMPLEX V (ATP SYNTHASE) DEFICIENCY, NUCLEAR TYPE 5","type":"exact"},{"name":"Mitochondrial Complex 5 (ATP Synthase) Deficiency, ATP5F1D Type","type":"exact"},{"name":"mitochondrial complex v (atp synthase) deficiency","type":"exact"}],"termid":"MONDO:0020858","terms_by_termid":{"MONDO:0020858":null},"xrefs":{"Monarch":{"xref_id":"0020858"}}}


id: PBO:0056090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme g1","termid":"PBO:0056090"}


id: PBO:0041141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4","termid":"PBO:0041141"}


id: PBO:0032748
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate pathway absent from pombe","termid":"PBO:0032748"}


id: GO:2000769
data:
  {"annotated_genes":["SJAG_03581","SJAG_04461","SJAG_00661","SJAG_00845","SJAG_04666","SJAG_00610","SJAG_04522","SJAG_02536","SJAG_00596","SJAG_00236","SJAG_01799","SJAG_00333","SJAG_02022","SJAG_04509","SJAG_03637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87112,91627,102027],"is_not":false,"summary":null,"term":"GO:2000769"},{"annotations":[115719,106771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"},{"annotations":[99361,104518,102879,92937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[102880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"},{"annotations":[112184,99364,90344,117910,93782,103710,94858,104521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of cell polarity regulating cell shape.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"regulates","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02536":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment or maintenance of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000769","terms_by_termid":{"GO:0061361":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0079482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin gamma pseudogene, Y-linked","termid":"PBO:0079482"}


id: GO:0097003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an adipokinetic hormone to initiate a change in cell activity. Adipokinetic hormones (AKHs) are protein or peptide hormones that are important for sugar and fat homeostasis in metazoa. In insects, they mobilize sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.","definition_xrefs":["PMID:11904407","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"adipokinetic hormone receptor activity","synonyms":[{"name":"AKH receptor activity","type":"exact"}],"termid":"GO:0097003"}


id: GO:0034072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: squalene = triterpene.","definition_xrefs":["PMID:18033581","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0009975","GO:0003824"],"is_obsolete":false,"name":"squalene cyclase activity","termid":"GO:0034072"}


id: MONDO:0017535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central polydactyly of fingers","termid":"MONDO:0017456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central polydactyly of fingers, unilateral","secondary_identifiers":["Orphanet:295171","icd11.foundation:738371690"],"synonyms":[{"name":"mesoaxial polydactyly of fingers, unilateral","type":"exact"},{"name":"mirror hand, unilateral","type":"exact"}],"termid":"MONDO:0017535","xrefs":{"Monarch":{"xref_id":"0017535"}}}


id: GO:0051645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the Golgi is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"Golgi localization","synonyms":[{"name":"Golgi apparatus localization","type":"exact"},{"name":"Golgi body localization","type":"exact"},{"name":"Golgi localisation","type":"exact"},{"name":"establishment and maintenance of Golgi localization","type":"exact"}],"termid":"GO:0051645"}


id: PBO:0113505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; produces two isoforms based on alternative translational starts; localizes to the nucleus and mitochondrion, producing N2,N2-dimethylguanosine in tRNAs; involved in the methylation of guanosine and uridine ribonucleosides in mRNA; nuclear Trm1p is evenly distributed around the inner nuclear membrane in WT, but mislocalizes as puncta near ER-nucleus junctions in spindle pole body mutants; both Trm1p inner nuclear membrane targeting and maintenance depend upon the SPB","termid":"PBO:0113505"}


id: PBO:0017555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic (sporulation) septin Spn2","termid":"PBO:0017555"}


id: GO:0035977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of sugar residues from a glycosylated protein that contributes to the breakdown of a glycoprotein.","definition_xrefs":["GOC:bf","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglycosylation","termid":"GO:0006517"},{"relation_name":"part_of","term_name":"glycoprotein catabolic process","termid":"GO:0006516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"protein deglycosylation involved in glycoprotein catabolic process","termid":"GO:0035977"}


id: PBO:0057027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-3","termid":"PBO:0057027"}


id: MONDO:0700220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease that occurs as a consequence of immunosuppression in a recipient of a solid organ or bone marrow transplant, or as a consequence of the transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease related to transplantation","secondary_identifiers":["GARD:21259","MEDGEN:745174","UMLS:C1998172","Orphanet:306644"],"termid":"MONDO:0700220","xrefs":{"Monarch":{"xref_id":"0700220"}}}


id: FYPO:0009079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of calcofluor and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to calcofluor and sodium dodecyl sulfate","synonyms":[{"name":"resistance to calcofluor and SDS","type":"exact"},{"name":"resistance to calcofluor and SDS during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and SDS in combination","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to calcofluor and SDS","type":"exact"},{"name":"resistant to calcofluor and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009079"}


id: PBO:0082772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the spindle pole body outer plaque; required for spindle orientation and mitotic nuclear migration; CNM67 has a paralog, ADY3, that arose from the whole genome duplication","termid":"PBO:0082772"}


id: GO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intrinsic circulatory process resulting from stress relaxation that modulates the force with which blood travels through the systemic arterial circulatory system. Stress relaxation is the adaptation of vessels to a new size as a result of changes in pressure in storage areas such as veins, the liver, the spleen, and the lungs.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by physical factors","termid":"GO:0003045"},{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by stress relaxation","synonyms":[{"name":"blood pressure regulation by stress relaxation","type":"exact"}],"termid":"GO:0003046"}


id: PBO:0045983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euchromatic histone lysine methyltransferase 1","termid":"PBO:0045983"}


id: RO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of starts with","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts","termid":"RO:0002223"}


id: MONDO:0025303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder caused by infection with Anaplasma.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease","termid":"MONDO:0006922"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplasmosis","secondary_identifiers":["UMLS:C0002797","NCIT:C128425","MESH:D000712","MEDGEN:8053","SCTID:13906002","SCTID:427481004","ICD9:082.49"],"synonyms":[{"name":"anaplasma caused disease or disorder","type":"exact"},{"name":"anaplasma disease or disorder","type":"exact"},{"name":"anaplasma infectious disease","type":"exact"},{"name":"anaplasmoses","type":"exact"},{"name":"human anaplasmosis","type":"exact"}],"termid":"MONDO:0025303","xrefs":{"Monarch":{"xref_id":"0025303"}}}


id: GO:0033907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing beta-D-fucose residues in beta-D-fucosides.","definition_xrefs":["EC:3.2.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"beta-D-fucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.38-RXN"],"synonyms":[{"name":"beta-D-fucoside fucohydrolase activity","type":"related"},{"name":"beta-fucosidase activity","type":"related"}],"termid":"GO:0033907"}


id: PBO:0017523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding Yip5 (predicted)","termid":"PBO:0017523"}


id: GO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein intermediate chain (obsolete GO:0001684)","synonyms":[{"name":"axonemal dynein intermediate chain","type":"exact"}],"termid":"GO:0001684"}


id: PATO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating in a point or edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharpness","termid":"PATO:0000944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sharp","termid":"PATO:0001419"}


id: PBO:0069614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 891, pseudogene","termid":"PBO:0069614"}


id: MONDO:0011927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tufted angioma is a very rare, benign, cutaneous, slow-growing, vascular tumor mostly developing in infancy or early childhood.","definition_xrefs":["Orphanet:1063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tufted angioma","secondary_identifiers":["MESH:C536924","SCTID:705155008","UMLS:C0346073","icd11.foundation:1994573217","GARD:425","HP:0012329","MEDGEN:83402","NCIT:C4487","OMIM:607859","ICD9:215.9","ICDO:9161/0"],"synonyms":[{"name":"Nakagawa angioblastoma","type":"exact"},{"name":"angioblastoma of Nakagawa","type":"exact"},{"name":"angioma tufted","type":"related"},{"name":"angioma, tufted","type":"related"},{"name":"tufted angioma","type":"exact"},{"name":"tufted angioma (disease)","type":"exact"},{"name":"tufted angioma of skin","type":"exact"},{"name":"tufted angioma of the skin","type":"exact"},{"name":"tufted hemangioma","type":"exact"},{"name":"tufted hemangioma of skin","type":"exact"},{"name":"tufted hemangioma of the skin","type":"exact"},{"name":"tufted skin angioma","type":"exact"}],"termid":"MONDO:0011927","xrefs":{"Monarch":{"xref_id":"0011927"}}}


id: PBO:0065553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTGER4P2-CDK2AP2P2 readthrough, transcribed pseudogene","termid":"PBO:0065553"}


id: GO:0039638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a lipopolysaccharide (LPS) on the host cell surface.","definition_xrefs":["GOC:bm","PMID:12837775","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion attachment to host cell","termid":"GO:0019062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide-mediated virion attachment to host cell","synonyms":[{"name":"LPS binding involved in viral attachment to host cell","type":"exact"},{"name":"lipopolysaccharide binding involved in viral attachment to host cell","type":"exact"},{"name":"virion attachment, binding to host lipopolysaccharide","type":"exact"}],"termid":"GO:0039638"}


id: PBO:0087883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087883"}


id: PBO:0043018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHL1 antisense RNA 2","termid":"PBO:0043018"}


id: PBO:0016112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus3 (predicted)","termid":"PBO:0016112"}


id: MONDO:0020139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete early-onset ataxia with dementia (obsolete MONDO:0020139)","secondary_identifiers":["Orphanet:98539"],"termid":"MONDO:0020139","xrefs":{"Monarch":{"xref_id":"0020139"}}}


id: PBO:0076867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 14, intercellular bridge forming factor","termid":"PBO:0076867"}


id: MONDO:0012093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 3","secondary_identifiers":["MEDGEN:373367","OMIM:608656","MESH:C563883","UMLS:C1837595","GARD:15439"],"synonyms":[{"name":"HPC3","type":"related"},{"name":"prostate cancer, hereditary, 3","type":"exact"},{"name":"prostate cancer, hereditary, type 3","type":"exact"},{"name":"prostate cancer, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0012093","xrefs":{"Monarch":{"xref_id":"0012093"}}}


id: PATO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's exhibiting vertical bars of one hue or degree of saturation crossing another.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"barred","termid":"PATO:0002276"}


id: PBO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer","termid":"PBO:0025453"}


id: GO:2000614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"is_a","term_name":"regulation of thyroid-stimulating hormone secretion","termid":"GO:2000612"},{"relation_name":"positively_regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"positive regulation of TSH secretion","type":"exact"},{"name":"positive regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000614"}


id: PBO:0091713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination protein Saw1","termid":"PBO:0091713"}


id: PBO:0054155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1522","termid":"PBO:0054155"}


id: PBO:0027421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_5'-3'_exonucleolytic_mRNA_catabolic_process","termid":"PBO:0027421"}


id: GO:2000372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA topoisomerase (ATP-hydrolyzing) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"},{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of DNA topoisomerase (ATP-hydrolyzing) activity","termid":"GO:2000371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA topoisomerase (ATP-hydrolyzing) activity","synonyms":[{"name":"negative regulation of DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"negative regulation of DNA topoisomerase II","type":"related"},{"name":"negative regulation of DNA topoisomerase IV activity","type":"exact"},{"name":"negative regulation of DNA topoisomerase type II activity","type":"exact"},{"name":"negative regulation of deoxyribonucleate topoisomerase","type":"related"},{"name":"negative regulation of deoxyribonucleic topoisomerase activity","type":"exact"},{"name":"negative regulation of topoisomerase","type":"related"},{"name":"negative regulation of topoisomerase II","type":"exact"},{"name":"negative regulation of type II DNA topoisomerase activity","type":"exact"}],"termid":"GO:2000372"}


id: GO:1990156
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing homohexameric DnaB helicase, and DnaG (a primase). Facilitates the unwinding of double-stranded DNA and the synthesis of RNA primer sequences during DNA replication and repair in Prokaryotes.","definition_xrefs":["GOC:bhm","PMID:14557266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"part_of","term_name":"core primosome complex","termid":"GO:1990098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"DnaB-DnaG complex","synonyms":[{"name":"DnaB-DnaG primosome complex","type":"related"}],"termid":"GO:1990156"}


id: GO:0071021
data:
  {"annotated_genes":["SJAG_02455"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113489],"is_not":false,"summary":null,"term":"GO:0071021"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed following the second splicing event and contains the spliced product, the excised intron, and three snRNPs, U5, U2 and U6.","definition_xrefs":["GOC:mah","GOC:krc","ISBN:0879695897","ISBN:0879697393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"post-spliceosomal complex","termid":"GO:0071020"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U2-type post-spliceosomal complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG post-spliceosomal complex","type":"narrow"},{"name":"major post-spliceosomal complex","type":"exact"},{"name":"mammalian U2-type spliceosomal complex C2","type":"narrow"},{"name":"yeast U2-type spliceosomal complex A2-3","type":"narrow"}],"termid":"GO:0071021","terms_by_termid":{"GO:0071021":null}}


id: PBO:0085417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; involved in resistance to azole drugs such as ketoconazole and fluconazole","termid":"PBO:0085417"}


id: GO:0035837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an ergot alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"ergot alkaloid metabolic process","termid":"GO:0035836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ergot alkaloid biosynthetic process","synonyms":[{"name":"ergot alkaloid anabolism","type":"exact"},{"name":"ergot alkaloid biosynthesis","type":"exact"},{"name":"ergot alkaloid formation","type":"exact"},{"name":"ergot alkaloid synthesis","type":"exact"}],"termid":"GO:0035837"}


id: MONDO:0010243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked immunoneurologic disorder is characterized by immune deficiency and neurological disorders in females, and by neonatal death in males.","definition_xrefs":["Orphanet:2571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"X-linked immunoneurologic disorder","secondary_identifiers":["SCTID:719827008","OMIM:300076","GARD:274","icd11.foundation:1464555617","MEDGEN:341162","MESH:C536743","UMLS:C1848144"],"synonyms":[{"name":"Woods Black Norbury syndrome","type":"exact"},{"name":"Woods-Black-Norbury syndrome","type":"exact"},{"name":"Woods-Black-Norbury syndrome, X-linked dominant","type":"exact"},{"name":"X-linked immunoneurological disorder","type":"exact"},{"name":"immunoneurologic disorder, X-linked","type":"exact"},{"name":"neonatal death immune deficiency","type":"exact"}],"termid":"MONDO:0010243","xrefs":{"Monarch":{"xref_id":"0010243"}}}


id: MONDO:0010340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Asperger syndrome, susceptibility to","termid":"MONDO:0100440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asperger syndrome, X-linked, susceptibility to, 1","secondary_identifiers":["OMIM:300494"],"synonyms":[{"name":"ASPERGER syndrome, X-linked, susceptibility to, 1","type":"related"},{"name":"ASPGX1","type":"related"},{"name":"Asperger syndrome susceptibility, X-linked 1, Isolated cases, X-linked","type":"exact"},{"name":"Asperger syndrome, X-linked, susceptibility to, 1","type":"exact"},{"name":"Asperger syndrome, X-linked, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to X-linked asperger syndrome 1","type":"related"}],"termid":"MONDO:0010340","xrefs":{"Monarch":{"xref_id":"0010340"}}}


id: GO:0048663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate commitment","secondary_identifiers":["GO:0042055"],"synonyms":[{"name":"neuron lineage restriction","type":"exact"},{"name":"neuronal lineage restriction","type":"exact"}],"termid":"GO:0048663"}


id: PBO:0067877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 179","termid":"PBO:0067877"}


id: PBO:0070046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 3, pseudogene","termid":"PBO:0070046"}


id: PBO:0039019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aftiphilin","termid":"PBO:0039019"}


id: PBO:0030100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutamate_level","termid":"PBO:0030100"}


id: PBO:0045177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJA4 divergent transcript","termid":"PBO:0045177"}


id: GO:0030210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heparin, any member of a group of glycosaminoglycans of average Mr (6000-20000), consisting predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"heparin metabolic process","termid":"GO:0030202"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"heparin biosynthetic process","synonyms":[{"name":"heparan sulfate biosynthetic process","type":"related"},{"name":"heparin anabolism","type":"exact"},{"name":"heparin biosynthesis","type":"exact"},{"name":"heparin formation","type":"exact"},{"name":"heparin synthesis","type":"exact"}],"termid":"GO:0030210"}


id: PBO:0069465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 730, pseudogene","termid":"PBO:0069465"}


id: PBO:0029627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_cohesion","termid":"PBO:0029627"}


id: PBO:0041404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 118","termid":"PBO:0041404"}


id: PBO:0043494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 3","termid":"PBO:0043494"}


id: GO:0033327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis.","definition_xrefs":["GOC:ln","PMID:12050120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Leydig cell differentiation","termid":"GO:0033327"}


id: PR:Q9P4X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh6 gene.","definition_xrefs":["UniProtKB:Q9P4X2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.04c","synonyms":[{"name":"Spom972h-omh6","type":"exact"}],"termid":"PR:Q9P4X2"}


id: MONDO:0014518
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85950],"is_not":false,"summary":null,"term":"MONDO:0014518"}]},"cv_name":"mondo","definition":"Any isolated hereditary giant platelet disorder in which the cause of the disease is a mutation in the PRKACG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17738","MEDGEN:863842","Orphanet:438207","UMLS:C4015405","OMIM:616176","DOID:0111048"],"synonyms":[{"name":"BDPLT19","type":"exact"},{"name":"PRKACG isolated hereditary giant platelet disorder","type":"exact"},{"name":"bleeding disorder, platelet-type, 19","type":"related"},{"name":"isolated hereditary giant platelet disorder caused by mutation in PRKACG","type":"exact"},{"name":"severe autosomal recessive macrothrombocytopenia","type":"exact"}],"termid":"MONDO:0014518","terms_by_termid":{"MONDO:0014518":null},"xrefs":{"Monarch":{"xref_id":"0014518"}}}


id: PBO:0029598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sodium:hydrogen_antiporter_activity","termid":"PBO:0029598"}


id: MONDO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphoid interstitial pneumonia (obsolete MONDO:0000268)","termid":"MONDO:0000268","xrefs":{"Monarch":{"xref_id":"0000268"}}}


id: GO:2000062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:obol","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell differentiation","termid":"GO:0051151"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"},{"relation_name":"negatively_regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ureter smooth muscle cell differentiation","termid":"GO:2000062"}


id: GO:0035144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anal fin are generated and organized. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"anal fin development","termid":"GO:0033335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anal fin morphogenesis","termid":"GO:0035144"}


id: PBO:0005310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-B (predicted)","termid":"PBO:0005310"}


id: GO:0031163
data:
  {"annotated_genes":["SJAG_03862","SJAG_00455","SJAG_02994","SJAG_03222","SJAG_01063","SJAG_01238","SJAG_02866","SJAG_01417","SJAG_02457","SJAG_00894","SJAG_00066","SJAG_02497","SJAG_00186","SJAG_00972","SJAG_02895","SJAG_03701","SJAG_00532","SJAG_04016","SJAG_02306","SJAG_04397","SJAG_01615","SJAG_04014"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106038,108835,113006,92388,88125,92159,102284,109028,97461,98436,100794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044571"},{"annotations":[100795,108399,116982,91976,87432,109015,98130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044572"},{"annotations":[88481,92161,67911,113897,103933,116983,99220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016226"}]},"cv_name":"biological_process","definition":"The incorporation of a metal and exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:pde","GOC:jl","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00186":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_00972":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_02306":null,"SJAG_02457":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04014":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"metallo-sulfur cluster assembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"metal-sulfur cluster assembly","type":"exact"},{"name":"metallo-sulfur cluster biosynthesis","type":"related"},{"name":"metallo-sulphur cluster assembly","type":"exact"}],"termid":"GO:0031163","terms_by_termid":{"GO:0016226":null,"GO:0044571":null,"GO:0044572":null}}


id: FYPO:0006472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation of one or more proteins involved in amino acid biosynthesis is decreased in response to starvation for one or more amino acids.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation of amino acid biosynthesis proteins during vegetative growth","termid":"FYPO:0006445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased translation of amino acid biosynthesis proteins in response to amino acid starvation","synonyms":[{"name":"decreased translation of amino acid biosynthesis genes in response to amino acid starvation","type":"exact"},{"name":"decreased translation of amino acid biosynthesis mRNAs in response to amino acid starvation","type":"exact"},{"name":"decreased translation of amino acid biosynthesis proteins during cellular response to amino acid starvation","type":"exact"},{"name":"decreased translation of amino acid biosynthesis proteins in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"decreased translation of amino acid biosynthesis proteins in response to amino acid starvation during vegetative growth","type":"exact"},{"name":"reduced translation of amino acid biosynthesis proteins in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006472"}


id: PBO:0070939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 47","termid":"PBO:0070939"}


id: GO:0061447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of endocardial cushion cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate specification","termid":"GO:0060912"},{"relation_name":"part_of","term_name":"endocardial cushion cell fate commitment","termid":"GO:0061445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion cell fate specification","termid":"GO:0061447"}


id: MONDO:0006595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Jaundice in perinates due to cellular damage of liver.","definition_xrefs":["EFO:1000750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"perinatal jaundice due to hepatocellular damage","secondary_identifiers":["MEDGEN:510683","DOID:11452","ICD9:774.4","UMLS:C0158976","SCTID:10877007"],"termid":"MONDO:0006595","xrefs":{"Monarch":{"xref_id":"0006595"}}}


id: PBO:0039445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKHD1-EIF4EBP3 readthrough","termid":"PBO:0039445"}


id: PBO:0080731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWC family member 3","termid":"PBO:0080731"}


id: MONDO:0003103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign and malignant neoplasms arising from one or more of the cervical, thoracic, lumbar, sacral, or coccygeal nerve roots. The majority of these tumors are benign. Clinical manifestations may include pain, weakness and loss of sensation along the course of the involved nerve root. Large tumors may cause spinal cord compression.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve root neoplasm","secondary_identifiers":["NCIT:C5119","DOID:4698","MEDGEN:233753","UMLS:C1334946"],"synonyms":[{"name":"neoplasm of nerve Root","type":"exact"},{"name":"neoplasm of nerve root","type":"exact"},{"name":"neoplasm of the nerve Root","type":"exact"},{"name":"neoplasms, nerve Root","type":"exact"},{"name":"nerve Root neoplasms","type":"exact"},{"name":"nerve Root tumor","type":"exact"},{"name":"nerve Root tumors","type":"exact"},{"name":"nerve Root tumour","type":"exact"},{"name":"nerve Root tumours","type":"exact"},{"name":"nerve root neoplasm (disease)","type":"exact"},{"name":"nerve root tumor","type":"exact"},{"name":"nerve root tumour","type":"exact"},{"name":"tumor of nerve Root","type":"exact"},{"name":"tumor of nerve root","type":"exact"},{"name":"tumor of the nerve Root","type":"exact"},{"name":"tumour of nerve Root","type":"exact"},{"name":"tumour of nerve root","type":"exact"},{"name":"tumour of the nerve Root","type":"exact"}],"termid":"MONDO:0003103","xrefs":{"Monarch":{"xref_id":"0003103"}}}


id: GO:0140843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine (position 7).","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain S7 O-GlcNAc transferase activity","termid":"GO:0140843"}


id: PBO:0005585
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YBR194W","termid":"PBO:0005585"}


id: RO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c acts upstream of or within p if c is enables 'p' and p' causally upstream of or within p","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","synonyms":[{"name":"affects","type":"related"}],"termid":"RO:0002264"}


id: PBO:0057172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 324","termid":"PBO:0057172"}


id: FYPO:0004927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore formation assembly is normal (i.e. indistinguishable from wild type). In prospore formation, the nascent membrane forms at the meiotic outer plaque and grows until closure occurs and forespores, or prospores, are formed.","definition_xrefs":["PomBase:mah","GO:0032120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal prospore membrane formation","synonyms":[{"name":"normal ascospore-type prospore membrane assembly","type":"exact"},{"name":"normal forespore membrane formation","type":"exact"}],"termid":"FYPO:0004927"}


id: MONDO:0005284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of multiple sclerosis characterized by a progressive deterioration in neurologic function which is in contrast to the more typical relapsing remitting form. If the clinical course is free of distinct remissions, it is referred to as primary progressive multiple sclerosis. When the progressive decline is punctuated by acute exacerbations, it is referred to as progressive relapsing multiple sclerosis. The term secondary progressive multiple sclerosis is used when relapsing remitting multiple sclerosis evolves into the chronic progressive form. (From Ann Neurol 1994;36 Suppl:S73-S79; Adams et al., Principles of Neurology, 6th ed, pp903-914)","definition_xrefs":["MESH:D020528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple sclerosis","termid":"MONDO:0005301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"chronic progressive multiple sclerosis","secondary_identifiers":["EFO:0003840","UMLS:C0393665","SCTID:230373008","MEDGEN:140733"],"termid":"MONDO:0005284","xrefs":{"Monarch":{"xref_id":"0005284"}}}


id: PBO:0073318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 1","termid":"PBO:0073318"}


id: MONDO:1010916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopathy that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"myopathy, non-human animal","termid":"MONDO:1010195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy, chicken","secondary_identifiers":["OMIA:000693-9031"],"termid":"MONDO:1010916","xrefs":{"Monarch":{"xref_id":"1010916"}}}


