# terms

id: FYPO:0001180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0001180)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased tyrosine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001180"}


id: PBO:0074688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 68","termid":"PBO:0074688"}


id: PBO:0029959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquinol-cytochrome-c_reductase_activity","termid":"PBO:0029959"}


id: MONDO:0003240
data:
  {"annotated_genes":["SJAG_03453","SJAG_01970","SJAG_03689","SJAG_04300","SJAG_01926","SJAG_02463","SJAG_01941","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007681"},{"annotations":[85724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007785"},{"annotations":[85145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026731"},{"annotations":[84916,84915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010134"},{"annotations":[86524,85082,86525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A disease involving the thyroid gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01926":null,"SJAG_01941":null,"SJAG_01970":null,"SJAG_02463":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04067":null,"SJAG_04300":null},"genotype_count":0,"is_obsolete":false,"name":"thyroid gland disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:50","ICD10CM:E00-E07","UMLS:C4317107","EFO:1000627","Wikipedia:Thyroid_disease","ICD9:240-246.99","ICD9:246.8","ICD9:246.9","SCTID:14304000","MESH:D013959","MEDGEN:1378579","NCIT:C26893"],"synonyms":[{"name":"disease of thyroid gland","type":"exact"},{"name":"disease or disorder of thyroid gland","type":"exact"},{"name":"disorder of thyroid gland","type":"exact"},{"name":"thyroid disease","type":"exact"},{"name":"thyroid gland disease","type":"exact"},{"name":"thyroid gland disease or disorder","type":"exact"},{"name":"thyroid gland diseases","type":"exact"},{"name":"thyroid gland disorder","type":"exact"},{"name":"thyroid gland disorders","type":"exact"}],"termid":"MONDO:0003240","terms_by_termid":{"MONDO:0007681":null,"MONDO:0007785":null,"MONDO:0008566":null,"MONDO:0010134":null,"MONDO:0026731":null},"xrefs":{"Monarch":{"xref_id":"0003240"}}}


id: PBO:0057742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1537","termid":"PBO:0057742"}


id: GO:1905665
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101328],"is_not":false,"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17640527","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion import","termid":"GO:0090280"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"is_a","term_name":"regulation of calcium ion import across plasma membrane","termid":"GO:1905664"},{"relation_name":"positively_regulates","term_name":"calcium ion import across plasma membrane","termid":"GO:0098703"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium ion import across plasma membrane","type":"narrow"},{"name":"up regulation of calcium ion import across plasma membrane","type":"exact"},{"name":"up-regulation of calcium ion import across plasma membrane","type":"exact"},{"name":"upregulation of calcium ion import across plasma membrane","type":"exact"}],"termid":"GO:1905665","terms_by_termid":{"GO:1905665":null}}


id: PBO:0072711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 4","termid":"PBO:0072711"}


id: GO:1901358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-D-galactofuranose.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose biosynthetic process","termid":"GO:0046369"},{"relation_name":"is_a","term_name":"beta-D-galactofuranose metabolic process","termid":"GO:1901356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"beta-D-galactofuranose biosynthetic process","synonyms":[{"name":"beta-D-galactofuranose anabolism","type":"exact"},{"name":"beta-D-galactofuranose biosynthesis","type":"exact"},{"name":"beta-D-galactofuranose formation","type":"exact"},{"name":"beta-D-galactofuranose synthesis","type":"exact"}],"termid":"GO:1901358"}


id: GO:0010949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of phytosterols into the blood by absorption from the small intestine.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intestinal lipid absorption","termid":"GO:1904730"},{"relation_name":"negatively_regulates","term_name":"intestinal phytosterol absorption","termid":"GO:0060752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal phytosterol absorption","termid":"GO:0010949"}


id: PBO:0048039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous sheath interacting protein 2","termid":"PBO:0048039"}


id: MONDO:0013526
data:
  {"annotated_genes":["SJAG_04513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85258],"is_not":false,"summary":null,"term":"MONDO:0013526"}]},"cv_name":"mondo","definition":"Any progressive myoclonic epilepsy in which the cause of the disease is a mutation in the GOSR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"progressive myoclonic epilepsy type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3872","UMLS:C5190805","MEDGEN:1681379","OMIM:614018","DOID:0111449","Orphanet:280620","icd11.foundation:878291417"],"synonyms":[{"name":"EPM6","type":"exact"},{"name":"GOSR2 progressive myoclonic epilepsy","type":"exact"},{"name":"GOSR2-related progressive myoclonus ataxia","type":"exact"},{"name":"North Sea progressive myoclonus epilepsy","type":"exact"},{"name":"PME type 6","type":"exact"},{"name":"epilepsy, progressive myoclonic 6","type":"exact"},{"name":"epilepsy, progressive myoclonic, 6","type":"related"},{"name":"epilepsy, progressive myoclonic, type 6","type":"exact"},{"name":"progressive myoclonic epilepsy caused by mutation in GOSR2","type":"exact"},{"name":"progressive myoclonus epilepsy type 6","type":"exact"}],"termid":"MONDO:0013526","terms_by_termid":{"MONDO:0013526":null},"xrefs":{"Monarch":{"xref_id":"0013526"}}}


id: PBO:0067268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 342, pseudogene","termid":"PBO:0067268"}


id: MOD:01066
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-phenylalanine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated phenylalanine","synonyms":[{"name":"HalPhe","type":"exact"}],"termid":"MOD:01066"}


id: PBO:0089096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane acetate transmembrane transporter","termid":"PBO:0089096"}


id: MONDO:0000824
data:
  {"annotated_genes":["SJAG_00938","SJAG_01941","SJAG_04049","SJAG_02463","SJAG_03011","SJAG_04059"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85663,85662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014375"},{"annotations":[84712,84711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008964"},{"annotations":[84543,84542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease","termid":"MONDO:0001673"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_03011":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital diarrhea","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060774","OMIMPS:214700"],"synonyms":[{"name":"diarrhea, congenital","type":"exact"}],"termid":"MONDO:0000824","terms_by_termid":{"MONDO:0008964":null,"MONDO:0009635":null,"MONDO:0014375":null},"xrefs":{"Monarch":{"xref_id":"0000824"}}}


id: GO:1901204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901204)","synonyms":[{"name":"regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901204"}


id: GO:0005777
data:
  {"annotated_genes":["SJAG_03440","SJAG_03671","SJAG_01685","SJAG_01474","SJAG_00326","SJAG_04823","SJAG_00114","SJAG_00706","SJAG_04315","SJAG_01165","SJAG_05950","SJAG_04467","SJAG_04299","SJAG_03166","SJAG_04146","SJAG_01854","SJAG_02247","SJAG_02384","SJAG_00891","SJAG_02630","SJAG_03781","SJAG_02997","SJAG_04428","SJAG_04763","SJAG_02619","SJAG_00702","SJAG_00947","SJAG_03493","SJAG_03091","SJAG_02848","SJAG_02496","SJAG_02693","SJAG_03715","SJAG_03324"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63013,95785,96777,99034,99146,101943,102268,104274,108769,110992,113065,113199,115857],"is_not":false,"summary":null,"term":"GO:0005777"},{"annotations":[104466,110973,114893,117412,110990,113878,89642],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005782"},{"annotations":[110991,114894,117297,110381,89634,89431,102267,97771,100491,104402,94621,96151,114434,105847,116436,114033,110533,116386],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.","definition_xrefs":["PMID:9302272","GOC:pm","UniProtKB-KW:KW-0576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody","termid":"GO:0042579"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_01165":null,"SJAG_01474":null,"SJAG_01685":null,"SJAG_01854":null,"SJAG_02247":null,"SJAG_02384":null,"SJAG_02496":null,"SJAG_02619":null,"SJAG_02630":null,"SJAG_02693":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03091":null,"SJAG_03166":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03493":null,"SJAG_03671":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04299":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04467":null,"SJAG_04763":null,"SJAG_04823":null,"SJAG_05950":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"peroxisome","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao499555322","Wikipedia:Peroxisome","GO:0019818"],"synonyms":[{"name":"peroxisomal","type":"related"},{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0005777","terms_by_termid":{"GO:0005777":null,"GO:0005778":null,"GO:0005782":null}}


id: FYPO:0005755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->3)-beta-D-glucan measured in the periplasmic space is greater than normal.","definition_xrefs":["PMID:11514435","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased (1->3)-beta-D-glucan level","termid":"FYPO:0007949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased (1->3)-beta-D-glucan level in periplasmic space","synonyms":[{"name":"increased (1,3)beta-D-glucan level in periplasmic space","type":"exact"},{"name":"increased (1->3)-beta-D-glucan accumulation in periplasmic space","type":"related"},{"name":"increased (1->3)-beta-D-glucan level in periplasmic space during mitotic cell cycle","type":"related"},{"name":"increased (1->3)-beta-D-glucan level in periplasmic space during vegetative growth","type":"exact"},{"name":"increased 1,3-beta-D-glucan level in periplasmic space","type":"exact"},{"name":"increased level of (1->3)-beta-D-glucan in periplasmic space","type":"exact"}],"termid":"FYPO:0005755"}


id: PBO:0075906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6","termid":"PBO:0075906"}


id: PBO:0081980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5B","termid":"PBO:0081980"}


id: GO:0051917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"regulates","term_name":"fibrinolysis","termid":"GO:0042730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibrinolysis","termid":"GO:0051917"}


id: GO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of precursor Z to molybdopterin, the final step in molybdopterin biosynthesis.","definition_xrefs":["PMID:18154309","PMID:8514783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"molybdopterin synthase activity","secondary_identifiers":["RHEA:26333","EC:2.8.1.12","Reactome:R-HSA-947541"],"termid":"GO:0030366"}


id: PR:O74443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- laf2 gene.","definition_xrefs":["UniProtKB:O74443","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIRM domain-containing protein laf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.13","synonyms":[{"name":"Spom972h-laf2","type":"exact"},{"name":"clr6 L-associated factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74443"}


id: FYPO:0004567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype which the spindle is broken into fragments during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000120","FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"fragmented spindle during meiosis II","synonyms":[{"name":"fragmented meiotic spindle during meiosis II","type":"exact"},{"name":"fragmented spindle during second meiotic nuclear division","type":"exact"},{"name":"fragmented spindle pole body during mitotic cell cycle","type":"related"},{"name":"spindle fragmentation during meiosis II","type":"exact"}],"termid":"FYPO:0004567"}


id: PBO:0055179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2603","termid":"PBO:0055179"}


id: PBO:0078934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 2-1","termid":"PBO:0078934"}


id: GO:0004117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 3',5'-cyclic AMP + H2O = AMP + H+ and 3',5'-cyclic GMP + H2O = GMP + H+; this activity is activated by binding to calcium-bound calmodulin.","definition_xrefs":["PMID:8557689","PMID:9419816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-AMP phosphodiesterase activity","termid":"GO:0004115"},{"relation_name":"is_a","term_name":"3',5'-cyclic-GMP phosphodiesterase activity","termid":"GO:0047555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity","secondary_identifiers":["Reactome:R-HSA-111955"],"synonyms":[{"name":"calmodulin-activated cyclic-nucleotide dual specificity phosphodiesterase activity","type":"related"},{"name":"calmodulin-dependent cyclic-nucleotide phosphodiesterase activity","type":"broad"}],"termid":"GO:0004117"}


id: MONDO:0017055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycophenolate mofetil (MMF) embryopathy is a malformative syndrome due to the teratogenic effect of MMF, an effective immunosuppressive agent widely used for the prevention of organ rejection after organ transplantation.","definition_xrefs":["Orphanet:268249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycophenolate mofetil embryopathy","secondary_identifiers":["icd11.foundation:2111105927","UMLS:C4509879","SCTID:723406000","GARD:20946","MEDGEN:1387699"],"synonyms":[{"name":"MMF embryopathy","type":"exact"}],"termid":"MONDO:0017055","xrefs":{"Monarch":{"xref_id":"0017055"}}}


id: GO:0005552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete polyubiquitin (obsolete GO:0005552)","synonyms":[{"name":"polyubiquitin","type":"exact"}],"termid":"GO:0005552"}


id: PBO:0084925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monopolin; meiosis-specific kinetochore-associated protein involved in monopolar attachment of sister kinetochores to the meiotic spindle; subunit of monopolin, a complex that prevents biorientation of sister kinetochores to ensure homolog biorientation during meiosis I; regulates the conformation, enzyme kinetics and substrate specificity of the Dsn1p kinase, Hrr1p; expressed only during the first meiotic division","termid":"PBO:0084925"}


id: GO:0042397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphagen, any of a group of guanidine phosphates that occur in muscle and can be used to regenerate ATP from ADP during muscular contraction.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphagen metabolic process","termid":"GO:0006599"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphagen catabolic process","synonyms":[{"name":"phosphagen breakdown","type":"exact"},{"name":"phosphagen catabolism","type":"exact"},{"name":"phosphagen degradation","type":"exact"}],"termid":"GO:0042397"}


id: PBO:0088232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery protein Cia2","termid":"PBO:0088232"}


id: PBO:0080788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC1 N-terminal domain containing 1, C-terminal like pseudogene","termid":"PBO:0080788"}


id: GO:0050853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen receptor-mediated signaling pathway","termid":"GO:0050851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"B cell receptor signaling pathway","synonyms":[{"name":"B cell receptor signalling pathway","type":"exact"},{"name":"B lymphocyte receptor signaling pathway","type":"exact"},{"name":"B lymphocyte receptor signalling pathway","type":"exact"},{"name":"B-cell receptor signaling pathway","type":"exact"},{"name":"B-cell receptor signalling pathway","type":"exact"},{"name":"B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"B-lymphocyte receptor signalling pathway","type":"exact"}],"termid":"GO:0050853"}


id: PBO:0063796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 24","termid":"PBO:0063796"}


id: GO:0070532
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, BACH1 and TopBP1, and binds to DNA during S phase at DNA damage sites.","definition_xrefs":["GOC:mah","PMID:16391231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BRCA1-B complex","termid":"GO:0070532"}


id: MONDO:0032581
data:
  {"annotated_genes":["SJAG_01374","SJAG_03986"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85614,85615],"is_not":false,"summary":null,"term":"MONDO:0032581"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_03986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618177","GARD:16300","DOID:0080393","MEDGEN:1648464","UMLS:C4748549"],"synonyms":[{"name":"NEPHROTIC SYNDROME, TYPE 18","type":"related"},{"name":"NPHS18","type":"related"}],"termid":"MONDO:0032581","terms_by_termid":{"MONDO:0032581":null},"xrefs":{"Monarch":{"xref_id":"0032581"}}}


id: PBO:0072297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 15","termid":"PBO:0072297"}


id: GO:0003381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form that occurs when an epithelial cell progresses from it initial formation to its mature state, contributing to the process of gastrulation.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis involved in gastrulation","termid":"GO:0003381"}


id: PBO:0070387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1B","termid":"PBO:0070387"}


id: MONDO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the fallopian tube. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C40128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube cancer","termid":"MONDO:0002158"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube leiomyosarcoma","secondary_identifiers":["UMLS:C1517116","MEDGEN:274488","DOID:1965"],"synonyms":[{"name":"fallopian tube leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of fallopian tube","type":"exact"}],"termid":"MONDO:0002159","xrefs":{"Monarch":{"xref_id":"0002159"}}}


id: PBO:0044136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 2","termid":"PBO:0044136"}


id: GO:0035153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of epithelial cells within each migrating branch in an open tracheal system to distinct tracheal cell fates. During the migration phase each branch forms a well-defined number of cell types (including fusion cells, terminal cells and branch cells) at precise positions.","definition_xrefs":["GOC:mtg_sensu","PMID:10684581","PMID:11063940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell type specification, open tracheal system","synonyms":[{"name":"tracheal cell type specification","type":"broad"},{"name":"tracheal epithelial cell type specification","type":"exact"}],"termid":"GO:0035153"}


id: GO:0110073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apical constriction involved in ventral furrow formation.","definition_xrefs":["GOC:ha","PMID:28495958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastrulation","termid":"GO:0010470"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of actin filament-based movement","termid":"GO:1903115"},{"relation_name":"regulates","term_name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110073"}


id: GO:1901479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of benomyl from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transmembrane transporter activity (obsolete GO:1901479)","synonyms":[{"name":"benomyl transporter activity","type":"related"}],"termid":"GO:1901479"}


id: GO:0017171
data:
  {"annotated_genes":["SJAG_04785","SJAG_03648","SJAG_03910","SJAG_02432","SJAG_00737","SJAG_05286","SJAG_03258","SJAG_03261","SJAG_02809","SJAG_00975","SJAG_01136","SJAG_01868","SJAG_04398","SJAG_02565","SJAG_03760","SJAG_00984","SJAG_03121","SJAG_01285","SJAG_04819","SJAG_04928"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92231],"is_not":false,"summary":null,"term":"GO:0017171"},{"annotations":[87421,91021,103569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[102994,92473,104003,96833,103001,90815,93362,86695,112545,108349,100480,117567,107233,102254,92382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[88346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008236"},{"annotations":[100481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["Wikipedia:Serine_hydrolase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03760":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"serine hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017171","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null,"GO:0017171":null}}


id: GO:0046933
data:
  {"annotated_genes":["SJAG_02105","SJAG_00438","SJAG_MIT09","SJAG_02564","SJAG_04122","SJAG_05204","SJAG_00542","SJAG_02598","SJAG_03925","SJAG_03114","SJAG_00836","SJAG_07003","SJAG_00133","SJAG_00915","SJAG_MIT15","SJAG_MIT37","SJAG_00985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88341,92057,92058,92480,93066,94042,101004,102214,102832,102861,104170,106969,107061,107941,114981,118184,118190,118196],"is_not":false,"summary":null,"term":"GO:0046933"}]},"cv_name":"molecular_function","definition":"Enables the synthesis of ATP from ADP and phosphate by the transfer of protons from one side of a membrane to the other by a rotational mechanism driven by a gradient according to the reaction: ADP + H2O + phosphate + H+(in) -> ATP + H+(out).","definition_xrefs":["RHEA:57722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton channel activity","termid":"GO:0015252"},{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0016874","GO:0003674","GO:0003824","GO:0022857"],"is_obsolete":false,"name":"proton-transporting ATP synthase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:3.A.2.1.1","Reactome:R-HSA-164832"],"synonyms":[{"name":"H+-transporting ATP synthase activity","type":"related"},{"name":"hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"}],"termid":"GO:0046933","terms_by_termid":{"GO:0046933":null}}


id: PBO:0041033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2C","termid":"PBO:0041033"}


id: PBO:0071517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 20","termid":"PBO:0071517"}


id: MONDO:1011195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrodysplasia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplasia, domestic cat","secondary_identifiers":["OMIA:001315-9685"],"termid":"MONDO:1011195","xrefs":{"Monarch":{"xref_id":"1011195"}}}


id: MONDO:0042452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"yaws","termid":"MONDO:0006019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tertiary lesion of yaws","secondary_identifiers":["MEDGEN:575866","UMLS:C0343833","SCTID:88037009"],"synonyms":[{"name":"tertiary lesion of yaws","type":"exact"},{"name":"tertiary stage of yaws","type":"related"},{"name":"tertiary yaws","type":"related"}],"termid":"MONDO:0042452","xrefs":{"Monarch":{"xref_id":"0042452"}}}


id: MONDO:0002247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A coagulation disorder characterized by the partial or complete absence of factor X activity in the blood.","definition_xrefs":["NCIT:C131632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor X deficiency","secondary_identifiers":["SCTID:76642003","MESH:D005171","MEDGEN:4635","NANDO:2200678","UMLS:C0015519"],"termid":"MONDO:0002247","xrefs":{"Monarch":{"xref_id":"0002247"}}}


id: PBO:0030413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_purvalanol_A","termid":"PBO:0030413"}


id: PBO:0028067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitochondrion","termid":"PBO:0028067"}


id: PBO:0053018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMTOR5 antisense RNA 1","termid":"PBO:0053018"}


id: PBO:0059577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 4","termid":"PBO:0059577"}


id: GO:0141101
data:
  {"annotated_genes":["SJAG_03367"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117096],"is_not":false,"summary":null,"term":"GO:0141101"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Catalysis of the reaction: S-adenosyl-L-methionine + uridine44 in tRNASer = 2'-O-methyluridine44 in tRNASer + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:43100","PMID:18025252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0003824","GO:0016741","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"tRNA(Ser) (uridine(44)-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.211","MetaCyc:RXN-12368","Reactome:R-HSA-6788707"],"synonyms":[{"name":"tRNA(Ser) (uracil(44)-2'-O-)-methyltransferase activity","type":"exact"}],"termid":"GO:0141101","terms_by_termid":{"GO:0141101":null}}


id: PBO:0075223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 2","termid":"PBO:0075223"}


id: GO:0033826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-glucosyl residue from UDP-glucose on to a glucose residue in xyloglucan, forming a beta-1,4-D-glucosyl-D-glucose linkage.","definition_xrefs":["EC:2.4.1.168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"xyloglucan 4-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12419"],"synonyms":[{"name":"UDP-glucose:xyloglucan 1,4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:xyloglucan 1,4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-xyloglucan 4beta-glucosyltransferase activity","type":"related"},{"name":"xyloglucan 4beta-D-glucosyltransferase activity","type":"related"},{"name":"xyloglucan glucosyltransferase activity","type":"related"}],"termid":"GO:0033826"}


id: PATO:0000516
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having sensitivity toward an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitive toward","synonyms":[{"name":"sensitive","type":"exact"}],"termid":"PATO:0000516"}


id: SO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An ISRE is a transcriptional cis regulatory region, containing the consensus region: YAGTTTC(A/T)YTTTYCC, responsible for increased transcription via interferon binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISRE","synonyms":[{"name":"interferon stimulated response element","type":"exact"}],"termid":"SO:0001715"}


id: GO:1905656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of artery smooth muscle contraction.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GOC:BHF","PMID:27389411","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle contraction","termid":"GO:1904695"},{"relation_name":"is_a","term_name":"regulation of artery smooth muscle contraction","termid":"GO:1905654"},{"relation_name":"positively_regulates","term_name":"artery smooth muscle contraction","termid":"GO:0014824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of artery smooth muscle contraction","synonyms":[{"name":"activation of artery smooth muscle contraction","type":"narrow"},{"name":"up regulation of artery smooth muscle contraction","type":"exact"},{"name":"up-regulation of artery smooth muscle contraction","type":"exact"},{"name":"upregulation of artery smooth muscle contraction","type":"exact"}],"termid":"GO:1905656"}


id: PBO:0063138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin gamma","termid":"PBO:0063138"}


id: PBO:0067397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 503, pseudogene","termid":"PBO:0067397"}


id: PBO:0001024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp14 (predicted)","termid":"PBO:0001024"}


id: PBO:0091747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter Sul1","termid":"PBO:0091747"}


id: GO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a protozoan is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to protozoan","termid":"GO:0001562"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of protozoan","synonyms":[{"name":"detection of protozoa","type":"exact"},{"name":"detection of protozoon","type":"exact"},{"name":"perception of protozoa","type":"related"}],"termid":"GO:0001563"}


id: MONDO:0018485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen storage disease due to acid maltase deficiency, late onset (AMDL), a form of Glycogen storage disease due to acid maltase deficiency (AMD), a degenerative metabolic myopathy particularly affecting respiratory and skeletal muscles, is characterized by an accumulation of glycogen in lysosomes.","definition_xrefs":["Orphanet:420429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease II","termid":"MONDO:0009290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561","MONDO:0005267"],"is_obsolete":false,"name":"glycogen storage disease due to acid maltase deficiency, late-onset","secondary_identifiers":["GARD:21746","MEDGEN:575206","UMLS:C0342753","SCTID:722343009"],"synonyms":[{"name":"Alpha-1,4-glucosidase acid deficiency, late onset","type":"exact"},{"name":"Alpha-1,4-glucosidase acid deficiency, late-onset","type":"exact"},{"name":"GSD due to acid maltase deficiency, late onset","type":"exact"},{"name":"GSD due to acid maltase deficiency, late-onset","type":"exact"},{"name":"GSD type 2, late onset","type":"exact"},{"name":"GSD type 2, late-onset","type":"exact"},{"name":"GSD type II, late onset","type":"exact"},{"name":"GSD type II, late-onset","type":"exact"},{"name":"LOPD","type":"exact"},{"name":"Pompe disease, late onset","type":"exact"},{"name":"Pompe disease, late-onset","type":"exact"},{"name":"glycogen storage disease type 2, late onset","type":"exact"},{"name":"glycogen storage disease type 2, late-onset","type":"exact"},{"name":"glycogen storage disease type II, late onset","type":"exact"},{"name":"glycogen storage disease type II, late-onset","type":"exact"},{"name":"glycogenosis type 2, late onset","type":"exact"},{"name":"glycogenosis type 2, late-onset","type":"exact"},{"name":"glycogenosis type II, late onset","type":"exact"},{"name":"glycogenosis type II, late-onset","type":"exact"}],"termid":"MONDO:0018485","xrefs":{"Monarch":{"xref_id":"0018485"}}}


id: PBO:0028094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028094"}


id: GO:0046762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral budding that starts with formation of a membrane curvature in the host ER membrane.","definition_xrefs":["ISBN:0072370319","GOC:jl","GOC:bf","VZ:1947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from endoplasmic reticulum membrane","secondary_identifiers":["GO:0046764","GO:0046751"],"synonyms":[{"name":"ER membrane viral budding","type":"exact"},{"name":"ER membrane viral budding during viral capsid envelopment","type":"related"},{"name":"endoplasmic reticulum membrane viral budding","type":"exact"},{"name":"endoplasmic reticulum membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from ER membrane","type":"exact"},{"name":"viral budding from ER membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from ER membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from ER membrane","type":"exact"},{"name":"virus budding from ER membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from ER membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046762"}


id: GO:1900631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tridecane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tridecane metabolic process","synonyms":[{"name":"tridecane metabolism","type":"exact"}],"termid":"GO:1900631"}


id: PBO:0066684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting pseudogene 2","termid":"PBO:0066684"}


id: MONDO:0010602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common form of hemophilia characterized by spontaneous or prolonged hemorrhages due to factor VIII deficiency.","definition_xrefs":["Orphanet:98878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"hemophilia","termid":"MONDO:0018660"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemophilia A","secondary_identifiers":["OMIM:306700","NANDO:2200676","icd11.foundation:337607970","OMIM:134500","DOID:12134","NORD:1221","ICD9:286.0","NCIT:C27146","MESH:D006467","UMLS:C0019069","MedDRA:10016080","GARD:6591","MEDGEN:5501","SCTID:234440005"],"synonyms":[{"name":"HEMA","type":"related"},{"name":"Haemophilia A","type":"related"},{"name":"Subhemophilia","type":"exact"},{"name":"autosomal haemophilia a","type":"related"},{"name":"autosomal hemophilia a","type":"related"},{"name":"classic haemophilia","type":"related"},{"name":"classic hemophilia","type":"related"},{"name":"classical haemophilia","type":"related"},{"name":"classical hemophilia","type":"related"},{"name":"congenital factor VIII disorder","type":"exact"},{"name":"factor 8 deficiency","type":"related"},{"name":"factor VIII deficiency","type":"exact"},{"name":"haemophilia A, congenital","type":"related"},{"name":"haemophilia a, X-linked recessive","type":"exact"},{"name":"haemophilia type A","type":"exact"},{"name":"haemophilia type a","type":"exact"},{"name":"hem A","type":"related"},{"name":"hemophilia A","type":"exact"},{"name":"hemophilia A, congenital","type":"related"},{"name":"hemophilia a, X-linked recessive","type":"exact"},{"name":"hemophilia type A","type":"exact"},{"name":"hemophilia type a","type":"exact"},{"name":"hemophilia, classic","type":"related"},{"name":"hereditary Factor VIII deficiency","type":"exact"},{"name":"hereditary Factor VIII deficiency disease","type":"exact"}],"termid":"MONDO:0010602","xrefs":{"Monarch":{"xref_id":"0010602"}}}


id: PBO:0041877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"castor zinc finger 1","termid":"PBO:0041877"}


id: GO:0070341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of fat cells by cell division, resulting in the expansion of their population. A fat cell is an animal connective tissue cell specialized for the synthesis and storage of fat.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat cell proliferation","synonyms":[{"name":"adipocyte proliferation","type":"exact"},{"name":"adipose cell proliferation","type":"exact"}],"termid":"GO:0070341"}


id: MONDO:1040012
data:
  {"annotated_genes":["SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030669"},{"annotations":[84325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014679"},{"annotations":[85268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030482"}]},"cv_name":"mondo","definition":"Any human disease in which the cause of the disease is a variation in the PI4KA gene. This disease is characterized primarily by neurologic dysfunction (limb spasticity, developmental delay, intellectual disability, seizures, ataxia, nystagmus), gastrointestinal manifestations (multiple intestinal atresia, inflammatory bowel disease), and combined immunodeficiency (leukopenia, variable immunoglobulin defects). Age of onset is typically antenatal or in early childhood; individuals can present with any combination of these features. Rare individuals present with later-onset hereditary spastic paraplegia. Brain MRI findings can include hypomyelinating leukodystrophy, cerebellar hypoplasia/atrophy, thin or dysplastic corpus callosum, and/or perisylvian polymicrogyria.","definition_xrefs":["PMID:35951779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"bilateral perisylvian polymicrogyria","termid":"MONDO:0020340"},{"relation_name":"is_a","term_name":"gastrointestinal defect and immunodeficiency syndrome","termid":"MONDO:0030831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"PI4KA-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:1040012","terms_by_termid":{"MONDO:0014679":null,"MONDO:0030482":null,"MONDO:0030669":null},"xrefs":{"Monarch":{"xref_id":"1040012"}}}


id: PBO:0057337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 523","termid":"PBO:0057337"}


id: PBO:0053260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF antisense RNA 1","termid":"PBO:0053260"}


id: MONDO:0007538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the FAM83H gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcified amelogenesis imperfecta","termid":"MONDO:0968955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, type 3A","secondary_identifiers":["SCTID:109471001","DOID:0110055","MESH:C562880","OMIM:130900"],"synonyms":[{"name":"ADHCAI","type":"exact"},{"name":"AI3","type":"exact"},{"name":"AI3A","type":"related"},{"name":"FAM83H amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in FAM83H","type":"exact"},{"name":"amelogenesis imperfecta hypomineralization type","type":"broad"},{"name":"amelogenesis imperfecta type 3","type":"broad"},{"name":"amelogenesis imperfecta type 3A","type":"related"},{"name":"amelogenesis imperfecta type III","type":"broad"},{"name":"amelogenesis imperfecta, hypocalcification type, autosomal dominant","type":"related"},{"name":"amelogenesis imperfecta, hypomineralization type","type":"related"},{"name":"amelogenesis imperfecta, type 3","type":"related"},{"name":"amelogenesis imperfecta, type 3A","type":"exact"},{"name":"amelogenesis imperfecta, type III","type":"related"},{"name":"amelogenesis imperfecta, type IIIA","type":"related"},{"name":"autosomal dominant amelogenesis imperfecta hypocalcification type","type":"exact"}],"termid":"MONDO:0007538","xrefs":{"Monarch":{"xref_id":"0007538"}}}


id: GO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal-associated lymphoid tissue (MALT) mediated by B cells.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction in mucosal-associated lymphoid tissue","termid":"GO:0002401"},{"relation_name":"is_a","term_name":"peripheral B cell tolerance induction","termid":"GO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction in mucosal-associated lymphoid tissue","synonyms":[{"name":"B cell tolerance induction in MALT","type":"exact"}],"termid":"GO:0002402"}


id: MONDO:0021394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the vagina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of vagina","secondary_identifiers":["ICD10CM:N84.2","SCTID:29609001","UMLS:C0156390","MEDGEN:56378","NCIT:C3664","icd11.foundation:1664143745","ICD9:623.7"],"synonyms":[{"name":"polyp of the vagina","type":"exact"},{"name":"polyp, vaginal, benign","type":"exact"},{"name":"vagina polyp","type":"exact"},{"name":"vaginal polyp","type":"exact"}],"termid":"MONDO:0021394","xrefs":{"Monarch":{"xref_id":"0021394"}}}


id: PBO:0042168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCM2 scaffold protein","termid":"PBO:0042168"}


id: PBO:0083753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential cytoplasmic iron-sulfur cluster binding protein; forms a complex with Cfd1p that is involved in iron-sulfur protein assembly in the cytosol; similar to P-loop NTPases","termid":"PBO:0083753"}


id: PBO:0090201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone N-acetyltransferase Naa40/NatD","termid":"PBO:0090201"}


id: GO:1901376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organic heteropentacyclic compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organic heteropentacyclic compound metabolic process","synonyms":[{"name":"organic heteropentacyclic compound metabolism","type":"exact"}],"termid":"GO:1901376"}


id: MONDO:0054843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 38","secondary_identifiers":["DOID:0111852","GARD:16288","MEDGEN:1648465","UMLS:C4748052","OMIM:618063"],"synonyms":[{"name":"CILD38","type":"related"},{"name":"ciliary dyskinesia, PRIMARY, 38","type":"related"},{"name":"ciliary dyskinesia, Primary, 38, with or without situs inversus","type":"related"}],"termid":"MONDO:0054843","xrefs":{"Monarch":{"xref_id":"0054843"}}}


id: PBO:0039939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 2","termid":"PBO:0039939"}


id: PBO:0046205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B pseudogene 2","termid":"PBO:0046205"}


id: PBO:0049586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 4","termid":"PBO:0049586"}


id: GO:1902401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any detection of stimulus that is involved in mitotic DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic DNA damage checkpoint (obsolete GO:1902401)","synonyms":[{"name":"perception of stimulus involved in mitotic DNA damage checkpoint","type":"related"},{"name":"stimulus detection involved in mitotic DNA damage checkpoint","type":"exact"},{"name":"stimulus sensing involved in mitotic DNA damage checkpoint","type":"related"}],"termid":"GO:1902401"}


id: MONDO:0024625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"disorder of lacrimal gland","secondary_identifiers":["MEDGEN:536365","UMLS:C0235228","SCTID:95766002"],"synonyms":[{"name":"disease of lacrimal gland","type":"exact"},{"name":"disease or disorder of lacrimal gland","type":"exact"},{"name":"disorder of lacrimal gland","type":"exact"},{"name":"lacrimal gland disease","type":"exact"},{"name":"lacrimal gland disease or disorder","type":"exact"}],"termid":"MONDO:0024625","xrefs":{"Monarch":{"xref_id":"0024625"}}}


id: PBO:0046178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II","termid":"PBO:0046178"}


id: MONDO:0005930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postpoliomyelitis syndrome (obsolete MONDO:0005930)","termid":"MONDO:0005930","xrefs":{"Monarch":{"xref_id":"0005930"}}}


id: MONDO:0014554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infantile multisystem neurologic-endocrine-pancreatic disease (obsolete MONDO:0014554)","termid":"MONDO:0014554","xrefs":{"Monarch":{"xref_id":"0014554"}}}


id: PBO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl5 (predicted)","termid":"PBO:0002622"}


id: GO:0070469
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The protein complexes that form the electron transport system (the respiratory chain), associated with a cell membrane, usually the plasma membrane (in prokaryotes) or the inner mitochondrial membrane (on eukaryotes). The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["ISBN:0198547684","Wikipedia:Respirasome","GOC:mah","GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete respirasome (obsolete GO:0070469)","synonyms":[{"name":"membrane electron transport chain","type":"exact"},{"name":"respiratory chain","type":"exact"}],"termid":"GO:0070469"}


id: PBO:0057469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 587","termid":"PBO:0057469"}


id: PBO:0050594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2","termid":"PBO:0050594"}


id: PBO:0086602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is induced by activation of the HOG1 mitogen-activated signaling pathway and this induction is Hog1p/Pbs2p dependent; YJL107C and adjacent ORF, YJL108C are merged in related fungi","termid":"PBO:0086602"}


id: MONDO:0044281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Cis-3-hexen-1-ol (C3HEX) is present in a wide range of foods and beverages, including wine and spirits, olive oil, vegetables, fruit, and green tea. C3HEX is commonly associated with sensory characteristics such as 'green' and 'grassy.' The probability of an individual's ability to detect C3HEX at a particular intensity (the R-index) can be estimated, and the threshold for detection is normally distributed (summary by {1:Jaeger et al., 2010}).","definition_xrefs":["OMIM:615082"],"gene_count":0,"genotype_count":0,"name":"obsolete c3hex, ability to smell (obsolete MONDO:0044281)","synonyms":[{"name":"C3HEX, ability to smell","type":"exact"}],"termid":"MONDO:0044281","xrefs":{"Monarch":{"xref_id":"0044281"}}}


id: PR:Q9USM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coenzyme Q-binding protein COQ10 homolog A, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04486","PANTHER:PTHR12901:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q-binding protein coq10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.07","secondary_identifiers":["UniProtKB:Q9USM9"],"synonyms":[{"name":"Spom972h-COQ10A","type":"exact"}],"termid":"PR:Q9USM9"}


id: GO:1903589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23388056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell proliferation","termid":"GO:0001938"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:1903587"},{"relation_name":"positively_regulates","term_name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"activation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"activation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"narrow"},{"name":"positive regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"up-regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up-regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"upregulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"upregulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"}],"termid":"GO:1903589"}


id: PBO:0065104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type II regulatory subunit beta","termid":"PBO:0065104"}


id: MONDO:0037792
data:
  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id: PBO:0112850
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id: MONDO:0006664
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id: PBO:0002539
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id: PBO:0017438
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id: PBO:0074015
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id: MONDO:0012792
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id: GO:2000311
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id: MONDO:1010436
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id: GO:0102897
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id: PBO:0051826
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id: PR:Q69Z14
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id: PBO:0071856
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id: PBO:0085542
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id: GO:1902160
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id: PBO:0091539
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id: PBO:0000185
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id: PBO:0071109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 111","termid":"PBO:0071109"}


id: PBO:0069519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 788, pseudogene","termid":"PBO:0069519"}


id: PBO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP4 antisense RNA 1","termid":"PBO:0047834"}


id: PBO:0070916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 24","termid":"PBO:0070916"}


id: PBO:0052023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctophilin 1","termid":"PBO:0052023"}


id: PR:Q9UT74
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys2 gene.","definition_xrefs":["UniProtKB:Q9UT74","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoaconitase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.16","synonyms":[{"name":"Spom972h-lys2","type":"exact"},{"name":"homoaconitate hydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT74"}


id: FYECO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nocodazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ nocodazole","termid":"FYECO:0000222"}


id: PBO:0110051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tranlagtion factor Sls1","termid":"PBO:0110051"}


id: PBO:0083965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID Complex regulatory subunit; binds GID Complex in response to glucose through interactions with complex member Vid28p; regulates fructose-1,6-bisphosphatase (FBPase) targeting to the vacuole; promotes proteasome-dependent catabolite degradation of FBPase; peripheral membrane protein located at Vid (vacuole import and degradation) vesicles","termid":"PBO:0083965"}


id: PBO:0079586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D2","termid":"PBO:0079586"}


id: MONDO:0005635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of a glandular and a mesenchymal (fibromyomatous) component. It occurs in the uterine corpus and the cervix. A variant of adenomyoma associated with glandular architectural complexity is called atypical polypoid adenomyoma. Simple polypectomy is usually curative. Atypical polypoid adenomyoma may recur following polypectomy.","definition_xrefs":["NCIT:C3726"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"carcinosarcoma","termid":"MONDO:0002928"},{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomyoma","secondary_identifiers":["EFO:0007133","UMLS:C0206622","DOID:2609","MEDGEN:64617","MESH:D018194","ICDO:8932/0"],"synonyms":[{"name":"adenomyoma","type":"exact"},{"name":"adenomyoma (morphologic abnormality)","type":"exact"},{"name":"adenomyoma, benign","type":"exact"}],"termid":"MONDO:0005635","xrefs":{"Monarch":{"xref_id":"0005635"}}}


id: GO:0040035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of the hermaphrodite genitalia over time, from formation to the mature structures.","definition_xrefs":["ISBN:0140512888","GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete hermaphrodite genitalia development (obsolete GO:0040035)","termid":"GO:0040035"}


id: PBO:0110072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing Dbl1, implicated in DNA repair","termid":"PBO:0110072"}


id: PBO:0046369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD4 divergent transcript","termid":"PBO:0046369"}


id: GO:0003796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the beta-(1->4) linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan.","definition_xrefs":["PMID:22748813","EC:3.2.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lysozyme activity","secondary_identifiers":["MetaCyc:3.2.1.17-RXN","Reactome:R-HSA-8862320"],"synonyms":[{"name":"1,4-N-acetylmuramidase activity","type":"exact"},{"name":"L-7001","type":"related"},{"name":"N,O-diacetylmuramidase activity","type":"exact"},{"name":"PR1-lysozyme","type":"related"},{"name":"globulin G","type":"related"},{"name":"globulin G1","type":"related"},{"name":"lysozyme g","type":"related"},{"name":"mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"mucopeptide glucohydrolase activity","type":"exact"},{"name":"muramidase activity","type":"exact"},{"name":"peptidoglycan N-acetylmuramoylhydrolase activity","type":"related"}],"termid":"GO:0003796"}


id: PBO:0073354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 13","termid":"PBO:0073354"}


id: MONDO:0006218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic, non-invasive lesion that affects the gallbladder epithelium. It is characterized by the presence of atypical epithelial cells with an increased nuclear/cytoplasmic ratio, nuclear hyperchromasia, and loss of nuclear polarity.","definition_xrefs":["NCIT:C43606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder neoplasm","termid":"MONDO:0021253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder biliary intraepithelial neoplasia","secondary_identifiers":["EFO:1000265","MEDGEN:317714","UMLS:C1708174"],"synonyms":[{"name":"gallbladder BilIN","type":"exact"},{"name":"gallbladder biliary intraepithelial neoplasia","type":"exact"},{"name":"gallbladder dysplasia","type":"exact"},{"name":"gallbladder intraepithelial neoplasia","type":"exact"},{"name":"intracystic BilIN","type":"exact"},{"name":"intracystic biliary intraepithelial neoplasia","type":"exact"}],"termid":"MONDO:0006218","xrefs":{"Monarch":{"xref_id":"0006218"}}}


id: PBO:0071921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 6","termid":"PBO:0071921"}


id: PBO:0062779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily B member 1","termid":"PBO:0062779"}


id: FYPO:0003475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arsenate reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal arsenate reductase activity","termid":"FYPO:0003475"}


id: PBO:0066750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 48","termid":"PBO:0066750"}


id: MONDO:0011674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant intermediate Charcot-Marie-Tooth disease type B is a rare hereditary motor and sensory neuropathy characterized by intermediate motor median nerve conduction velocities (usually between 25 and 45 m/s) and signs of both demyelination and axonal degeneration in nerve biopsies. It presents with mild to moderately severe, slowly progressive usual clinical features of Charcot-Marie-Tooth disease (muscle weakness and atrophy of the distal extremities, distal sensory loss, reduced or absent deep tendon reflexes, and feet deformities). Other findings include asymptomatic neutropenia and early-onset cataracts.","definition_xrefs":["Orphanet:100044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0019548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease dominant intermediate B","secondary_identifiers":["MEDGEN:338346","GARD:12438","DOID:0110197","OMIM:606482","SCTID:765745007","UMLS:C1847902"],"synonyms":[{"name":"CMTDI1","type":"exact"},{"name":"CMTDIB","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in DNM2","type":"exact"},{"name":"Charcot-Marie-Tooth disease dominant intermediate type B","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal type 2M","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2M","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2M","type":"related"},{"name":"Charcot-Marie-Tooth disease, dominant Intermediate B, with neutropenia","type":"related"},{"name":"Charcot-Marie-Tooth disease, dominant Intermediate type B","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant intermediate B","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy dominant intermediate B","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, type 2M","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy, dominant Intermediate B","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy, dominant Intermediate B, with neutropenia","type":"related"},{"name":"Cmtdi1","type":"related"},{"name":"DI-CMTB","type":"exact"},{"name":"DNM2 Charcot-Marie-Tooth disease","type":"exact"},{"name":"DNM2-related intermediate Charcot-Marie-Tooth neuropathy","type":"related"},{"name":"Di-CMTB","type":"related"},{"name":"autosomal dominant intermediate Charcot-Marie-Tooth disease type B","type":"related"}],"termid":"MONDO:0011674","xrefs":{"Monarch":{"xref_id":"0011674"}}}


id: PBO:0055825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LPS responsive beige-like anchor protein","termid":"PBO:0055825"}


id: MONDO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compensatory emphysema","secondary_identifiers":["icd11.foundation:318427535","SCTID:33325001","UMLS:C0155918","MEDGEN:510136","ICD9:518.2","DOID:10031","ICD10CM:J98.3"],"termid":"MONDO:0000924","xrefs":{"Monarch":{"xref_id":"0000924"}}}


id: PBO:0082787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; promotes assembly and stability of the TOM complex","termid":"PBO:0082787"}


id: GO:0042327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"positively_regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphorylation","synonyms":[{"name":"activation of phosphorylation","type":"narrow"},{"name":"stimulation of phosphorylation","type":"narrow"},{"name":"up regulation of phosphorylation","type":"exact"},{"name":"up-regulation of phosphorylation","type":"exact"},{"name":"upregulation of phosphorylation","type":"exact"}],"termid":"GO:0042327"}


id: PBO:0113457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of nuclear RNase P; nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; not shared between RNase MRP and RNase P, in contrast to all other RNase P protein subunits; increases the activity and thermal stability of the complex, along with Pop2p; protein abundance increases in response to DNA replication stress","termid":"PBO:0113457"}


id: PBO:0063755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 20","termid":"PBO:0063755"}


id: PBO:0064102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 3","termid":"PBO:0064102"}


id: MONDO:0030993
data:
  {"annotated_genes":["SJAG_00336","SJAG_00303","SJAG_03542"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86048,86049,86050],"is_not":false,"summary":null,"term":"MONDO:0030993"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tessadori-Van-Haaften neurodevelopmental syndrome","termid":"MONDO:0031400"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00303":null,"SJAG_00336":null,"SJAG_03542":null},"genotype_count":0,"is_obsolete":false,"name":"Tessadori-Van Haaften neurodevelopmental syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619950","UMLS:C5774310","MEDGEN:1824083"],"synonyms":[{"name":"TEVANED3","type":"exact"},{"name":"Tessadori-Van Haaften neurodevelopmental syndrome 3","type":"exact"}],"termid":"MONDO:0030993","terms_by_termid":{"MONDO:0030993":null},"xrefs":{"Monarch":{"xref_id":"0030993"}}}


id: GO:0034986
data:
  {"annotated_genes":["SJAG_03862","SJAG_01418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99761,113013],"is_not":false,"summary":null,"term":"GO:0034986"}]},"cv_name":"molecular_function","definition":"Directly binding to and delivering iron ions to a target protein.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01418":null,"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"iron chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9854405","Reactome:R-HSA-9854984","Reactome:R-HSA-9866272"],"termid":"GO:0034986","terms_by_termid":{"GO:0034986":null}}


id: PBO:0071318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 2","termid":"PBO:0071318"}


id: RO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"is_symbiosis","termid":"RO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_parasitism","termid":"RO:0002468"}


id: MONDO:0019579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discrete papular lichen myxedematosus is a rare chronic, slowly progressive form of localized lichen myxedematosus characterized by the development of a few to multiple small symmetrical skin-coloured mucinous papules on the limbs and trunk.","definition_xrefs":["Orphanet:90394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"discrete papular lichen myxedematosus","secondary_identifiers":["MEDGEN:898313","UMLS:C4273967","SCTID:717258005","GARD:19138"],"termid":"MONDO:0019579","xrefs":{"Monarch":{"xref_id":"0019579"}}}


id: RO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"before_or_simultaneous_with","termid":"RO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"before","termid":"RO:0002083"}


id: MONDO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 106","secondary_identifiers":["UMLS:C5774212","DOID:0070392","MEDGEN:1823985","OMIM:620028"],"synonyms":[{"name":"DEE106","type":"exact"},{"name":"developmental and epileptic encephalopathy 106","type":"exact"}],"termid":"MONDO:0031052","xrefs":{"Monarch":{"xref_id":"0031052"}}}


id: PBO:0087402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stretch-activated Ca2+-permeable cation channel; required for Ca2+ influx stimulated by mating pheromones and some abiotic stresses; sensor of compressive mechanical stress; N-glycosylated membrane protein of the ER and plasma membrane; interacts with Cch1p; oligomerizes; is an alpha2/delta-like protein and participates in the generation of stretch-activated Ca2+-permeable cation channel activity when expressed in mammalian cells","termid":"PBO:0087402"}


id: MONDO:0021742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection occurring in puerperium, the period of 6-8 weeks after giving birth.","definition_xrefs":["MESH:D011645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"puerperal disorder","termid":"MONDO:0044013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"puerperal infection","secondary_identifiers":["EFO:1001407","MEDGEN:11022","UMLS:C0034041"],"synonyms":[{"name":"Infection, Puerperal","type":"related"},{"name":"Infections, Puerperal","type":"related"},{"name":"Puerperal Infection","type":"related"},{"name":"Puerperal Infections","type":"related"}],"termid":"MONDO:0021742","xrefs":{"Monarch":{"xref_id":"0021742"}}}


id: MONDO:0022098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Catamenial pneumothorax is an extremely rare condition that affects women. Pneumothorax is the medical term for a collapsed lung, a condition in which air or gas is trapped in the space surrounding the lungs causing the lungs to collapse. Women with catamenial pneumothorax have recurrent episodes of pneumothorax that occur within 72 hours before or after the start of menstruation. The exact cause of catamenial pneumothorax is unknown and several theories have been proposed. Many cases are associated with the abnormal development of endometrial tissue outside of the uterus (endometriosis). Some believe that catamenial pneumothorax is the most common form of thoracic endometriosis (a condition in which the endometrial tissue grows in or around the lungs). A diagnosis of catamenial pneumothorax is usually suspected when a woman of reproductive age and with endometriosis has episodes of pneumothorax.Treatment is with hormones and surgery.","definition_xrefs":["GARD:0009858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catamenial pneumothorax","secondary_identifiers":["icd11.foundation:1744257132","MEDGEN:83298","MESH:C538279","SCTID:233642001","UMLS:C0340007"],"synonyms":[{"name":"catamenial pneumothorax","type":"exact"},{"name":"premenstrual pneumothorax","type":"related"}],"termid":"MONDO:0022098","xrefs":{"Monarch":{"xref_id":"0022098"}}}


id: MONDO:0010363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the ZDHHC15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 91","secondary_identifiers":["UMLS:C1845142","OMIM:300577","DOID:0112043","MESH:C564482","MEDGEN:375592"],"synonyms":[{"name":"MRX91","type":"related"},{"name":"ZDHHC15 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"intellectual disability, X-linked 91","type":"exact"},{"name":"intellectual disability, X-linked type 91","type":"exact"},{"name":"mental retardation, X-linked 91","type":"related"},{"name":"mental retardation, X-linked 91, X-linked dominant","type":"exact"},{"name":"mental retardation, X-linked type 91","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in ZDHHC15","type":"exact"}],"termid":"MONDO:0010363","xrefs":{"Monarch":{"xref_id":"0010363"}}}


id: PBO:0066875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 175","termid":"PBO:0066875"}


id: MONDO:0013233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, primary bone dysplasia characterized by three distinct phenotypes, namely: 1) patients of average height with painful, osteoarthritic changes of the hip joints and no spinal abnormalities, 2) short-statured patients with predominantly truncal shortening, arm span exceeding height, dyspalstic changes of hips and varying degrees of platyspondyly, and 3) patients with dwarfism, various associated skeletal abnormalities (particularly of the knees and hands) and severe epiphyseal dysplasia (of hips, knees, hands, wrists) associated with significant platyspondyly. Most patients cannot walk long distances, and many have decreased joint spaces and sclerotic and cystic changes on imaging.","definition_xrefs":["Orphanet:99642"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Handigodu type","secondary_identifiers":["icd11.foundation:2048058677","OMIM:613343","GARD:10741","UMLS:C3150545","MEDGEN:461895"],"synonyms":[{"name":"Handigodu JOINT disease","type":"related"},{"name":"Hjd","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Handigodu type","type":"exact"}],"termid":"MONDO:0013233","xrefs":{"Monarch":{"xref_id":"0013233"}}}


id: MONDO:0018948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary neuromuscular disorder characterized by multiple cores on muscle biopsy and clinical features of a congenital myopathy.","definition_xrefs":["Orphanet:598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of selenoprotein N1","termid":"MONDO:0016197"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiminicore myopathy","secondary_identifiers":["NANDO:2200871","SCTID:55133004","UMLS:C0270962","DOID:0080991","MEDGEN:75731","GARD:16536","NANDO:1200480"],"synonyms":[{"name":"MmD","type":"exact"},{"name":"multicore disease","type":"exact"},{"name":"multicore myopathy","type":"exact"},{"name":"multiminicore disease","type":"exact"}],"termid":"MONDO:0018948","xrefs":{"Monarch":{"xref_id":"0018948"}}}


id: GO:0034498
data:
  {"annotated_genes":["SJAG_04219","SJAG_02750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114356,115561],"is_not":false,"summary":null,"term":"GO:0034498"}]},"cv_name":"biological_process","definition":"The directed movement of substances from early endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02750":null,"SJAG_04219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"early endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PGE to Golgi transport","type":"exact"},{"name":"post-Golgi endosome to Golgi transport","type":"exact"}],"termid":"GO:0034498","terms_by_termid":{"GO:0034498":null}}


id: FYPO:0000903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule depolymerization rate during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule catastrophe during vegetative growth","type":"related"},{"name":"decreased rate of microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule shrinkage during vegetative growth","type":"related"},{"name":"increased microtubule stability during vegetative growth","type":"related"},{"name":"reduced rate of microtubule depolymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0000903"}


id: GO:0046370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructose, the ketohexose arabino-2-hexulose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose metabolic process","termid":"GO:0006000"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"fructose biosynthetic process","synonyms":[{"name":"fructose anabolism","type":"exact"},{"name":"fructose biosynthesis","type":"exact"},{"name":"fructose formation","type":"exact"},{"name":"fructose synthesis","type":"exact"}],"termid":"GO:0046370"}


id: PBO:0052777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 19","termid":"PBO:0052777"}


id: GO:0039508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host receptor.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host receptor activity (obsolete GO:0039508)","synonyms":[{"name":"down-regulation by virus of host receptor activity","type":"exact"},{"name":"downregulation by virus of host receptor activity","type":"exact"},{"name":"inhibition by virus of host receptor activity","type":"narrow"},{"name":"negative regulation by virus of host receptor activity","type":"exact"},{"name":"suppression by virus of host receptor function","type":"exact"},{"name":"viral inhibition of host receptor","type":"exact"}],"termid":"GO:0039508"}


id: GO:0046949
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006629","GO:0055086","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"fatty-acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acyl CoA biosynthetic process","type":"exact"},{"name":"fatty-acyl-CoA anabolism","type":"exact"},{"name":"fatty-acyl-CoA biosynthesis","type":"exact"},{"name":"fatty-acyl-CoA formation","type":"exact"},{"name":"fatty-acyl-CoA synthesis","type":"exact"}],"termid":"GO:0046949","terms_by_termid":{"GO:0035338":null}}


id: PBO:0041322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 74","termid":"PBO:0041322"}


id: PBO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Prr1","termid":"PBO:0001258"}


id: GO:0032812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epinephrine secretion","termid":"GO:0014060"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epinephrine secretion","synonyms":[{"name":"activation of epinephrine secretion","type":"narrow"},{"name":"positive regulation of adrenaline secretion","type":"exact"},{"name":"stimulation of epinephrine secretion","type":"narrow"},{"name":"up regulation of epinephrine secretion","type":"exact"},{"name":"up-regulation of epinephrine secretion","type":"exact"},{"name":"upregulation of epinephrine secretion","type":"exact"}],"termid":"GO:0032812"}


id: MONDO:0020217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary dysgenetic glaucoma associated with neural crest cell migration anomaly (obsolete MONDO:0020217)","secondary_identifiers":["Orphanet:98632"],"synonyms":[{"name":"glaucoma associated with neural crest cell migration anomaly","type":"related"}],"termid":"MONDO:0020217","xrefs":{"Monarch":{"xref_id":"0020217"}}}


id: FYPO:0003692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to oxidative stress","synonyms":[{"name":"increased protein phosphorylation during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during oxidative stress response","type":"exact"}],"termid":"FYPO:0003692"}


id: MONDO:0020320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia (AML) characterized by blasts with evidence of maturation to more mature neutrophils. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloblastic leukemia with maturation","secondary_identifiers":["NCIT:C3250","EFO:0003028","NANDO:2200006","GARD:527","MEDGEN:361829","UMLS:C1879321","DOID:0081087","Orphanet:98834","ICDO:9874/3","ONCOTREE:AM"],"synonyms":[{"name":"AM","type":"related"},{"name":"AML M2","type":"exact"},{"name":"AML with maturation","type":"exact"},{"name":"FAB M2","type":"exact"},{"name":"LAM M2","type":"related"},{"name":"M2 acute granulocytic leukaemia","type":"exact"},{"name":"M2 acute granulocytic leukemia","type":"exact"},{"name":"M2 acute myeloblastic leukaemia","type":"exact"},{"name":"M2 acute myeloblastic leukaemia with maturation","type":"exact"},{"name":"M2 acute myeloblastic leukemia","type":"exact"},{"name":"M2 acute myeloblastic leukemia with maturation","type":"exact"},{"name":"M2 acute myelocytic leukaemia with maturation","type":"exact"},{"name":"M2 acute myelocytic leukemia with maturation","type":"exact"},{"name":"M2 acute myelogenous leukaemia","type":"exact"},{"name":"M2 acute myelogenous leukaemia with maturation","type":"exact"},{"name":"M2 acute myelogenous leukemia","type":"exact"},{"name":"M2 acute myelogenous leukemia with maturation","type":"exact"},{"name":"M2 acute myeloid leukaemia","type":"exact"},{"name":"M2 acute myeloid leukaemia with maturation","type":"exact"},{"name":"M2 acute myeloid leukemia","type":"exact"},{"name":"M2 acute myeloid leukemia with maturation","type":"exact"},{"name":"acute M2 myeloid leukaemia","type":"exact"},{"name":"acute M2 myeloid leukemia","type":"exact"},{"name":"acute myeloblastic leukaemia M2","type":"exact"},{"name":"acute myeloblastic leukaemia type 2","type":"related"},{"name":"acute myeloblastic leukemia M2","type":"exact"},{"name":"acute myeloblastic leukemia type 2","type":"related"},{"name":"acute myelocytic leukaemia with maturation","type":"exact"},{"name":"acute myelocytic leukemia with maturation","type":"exact"},{"name":"acute myelogenous leukaemia with maturation","type":"exact"},{"name":"acute myelogenous leukemia with maturation","type":"exact"},{"name":"acute myeloid leukaemia (AML-M2)","type":"exact"},{"name":"acute myeloid leukaemia with maturation","type":"exact"},{"name":"acute myeloid leukemia (AML-M2)","type":"exact"},{"name":"acute myeloid leukemia with maturation","type":"exact"}],"termid":"MONDO:0020320","xrefs":{"Monarch":{"xref_id":"0020320"}}}


id: PBO:0070770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12","termid":"PBO:0070770"}


id: PBO:0109300
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low codon stabilization coefficient","termid":"PBO:0109300"}


id: MONDO:0015572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral malformation due to abnormal neuronal migration (obsolete MONDO:0015572)","secondary_identifiers":["Orphanet:163209"],"synonyms":[{"name":"brain malformation due to abnormal neuronal migration","type":"exact"},{"name":"non-syndromic cerebral malformation due to abnormal neuronal migration","type":"related"}],"termid":"MONDO:0015572","xrefs":{"Monarch":{"xref_id":"0015572"}}}


id: PBO:0082977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic thioredoxin reductase; key regulatory enzyme that determines the redox state of the thioredoxin system, which acts as a disulfide reductase system and protects cells against both oxidative and reductive stress; protein abundance increases in response to DNA replication stress; TRR1 has a paralog, TRR2, that arose from the whole genome duplication","termid":"PBO:0082977"}


id: GO:0045489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues.","definition_xrefs":["PMID:11931668","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"pectin metabolic process","termid":"GO:0045488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pectin biosynthetic process","synonyms":[{"name":"pectin anabolism","type":"exact"},{"name":"pectin biosynthesis","type":"exact"},{"name":"pectin formation","type":"exact"},{"name":"pectin synthesis","type":"exact"}],"termid":"GO:0045489"}


id: FYPO:0000224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell grows in the form of a lemon. A lemon shape is defined mathematically as having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"lemon-shaped cell","synonyms":[{"name":"cell morphology, lemon shaped","type":"exact"},{"name":"lemon-shaped cell during mitotic cell cycle","type":"related"},{"name":"lemon-shaped cell during vegetative growth","type":"exact"},{"name":"lemon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0000224"}


id: FYECO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which adenine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ade","synonyms":[{"name":"+ adenine","type":"related"}],"termid":"FYECO:0000142"}


id: PBO:0059926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 12","termid":"PBO:0059926"}


id: GO:0052140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in host (obsolete GO:0052140)","synonyms":[{"name":"positive chemotaxis within host","type":"exact"}],"termid":"GO:0052140"}


id: GO:0044348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, which forms part of the cell wall.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"is_a","term_name":"plant-type cell wall cellulose metabolic process","termid":"GO:0052541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"plant-type cell wall cellulose catabolic process","synonyms":[{"name":"plant-type cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:0044348"}


id: FYPO:0007772
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118252,118349,118350,118356,118357,118638,118639,118646],"is_not":false,"summary":null,"term":"FYPO:0007772"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which reformation of the nuclear envelope after mitotic nuclear division begins later than normal.","definition_xrefs":["PMID:32109380","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01745":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_05207":null},"genotype_count":5,"genotypes_by_uniquename":{"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of mitotic nuclear membrane reassembly","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_05207","SJAG_03891","SJAG_01242","SJAG_01745","SJAG_03892"],"single_locus_genotype_uniquenames":["alx1delta","cmp7delta","vps32delta","vps4delta","lem2delta"],"synonyms":[{"name":"delayed mitotic nuclear membrane reassembly","type":"exact"},{"name":"delayed onset of mitotic nuclear envelope reassembly","type":"related"},{"name":"delayed onset of mitotic nuclear membrane reassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitotic nuclear membrane reassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007772","terms_by_termid":{"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0047316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate + L-glutamine = 2-oxoglutaramate + L-phenylalanine.","definition_xrefs":["RHEA:17593","EC:2.6.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"glutamine-phenylpyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.64-RXN","KEGG_REACTION:R01375"],"synonyms":[{"name":"L-glutamine:phenylpyruvate aminotransferase activity","type":"related"},{"name":"glutamine transaminase K activity","type":"related"},{"name":"glutamine--phenylpyruvate aminotransferase activity","type":"related"},{"name":"glutamine-phenylpyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047316"}


id: SO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a CDS.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_region","synonyms":[{"name":"CDS region","type":"exact"}],"termid":"SO:0000851"}


id: PBO:0055337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2765","termid":"PBO:0055337"}


id: PBO:0029842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maintenance_of_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029842"}


id: PBO:0111943
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease_3 family","termid":"PBO:0111943"}


id: MONDO:0044316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, anemia, and myelofibrosis","secondary_identifiers":["MEDGEN:1378448","UMLS:C4479504","OMIM:617441"],"synonyms":[{"name":"THAMY","type":"related"},{"name":"thrombocytopenia, anemia, and myelofibrosis","type":"exact"}],"termid":"MONDO:0044316","xrefs":{"Monarch":{"xref_id":"0044316"}}}


id: PBO:0005577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L39","termid":"PBO:0005577"}


id: PBO:0081240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF8 divergent transcript","termid":"PBO:0081240"}


id: FYPO:0000965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000965"}


id: GO:0080134
data:
  {"annotated_genes":["SJAG_04522","SJAG_02244","SJAG_00610","SJAG_02682","SJAG_05000","SJAG_01528","SJAG_04825","SJAG_01787","SJAG_00573","SJAG_00823","SJAG_03263","SJAG_04666","SJAG_01205","SJAG_03160","SJAG_02392","SJAG_01632","SJAG_03568","SJAG_02104","SJAG_04457","SJAG_01585","SJAG_03048","SJAG_03695","SJAG_00293","SJAG_03969","SJAG_00424","SJAG_01150","SJAG_01114","SJAG_00642","SJAG_01253","SJAG_03345","SJAG_00369","SJAG_03417"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102980,106204,95048,106769,98633,117439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[101548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[99059,95735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[110902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[110855,90443,105057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[89976,91619,87296,88645,102024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[88470,115528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900039"},{"annotations":[111177,116405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[106565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[92881,92882,112568,112569,116117,92883,112570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[101571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[93079,109333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006282"},{"annotations":[90118,105739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[108468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00369":null,"SJAG_00424":null,"SJAG_00573":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00823":null,"SJAG_01114":null,"SJAG_01150":null,"SJAG_01205":null,"SJAG_01253":null,"SJAG_01528":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01787":null,"SJAG_02104":null,"SJAG_02244":null,"SJAG_02392":null,"SJAG_02682":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03263":null,"SJAG_03345":null,"SJAG_03417":null,"SJAG_03568":null,"SJAG_03695":null,"SJAG_03969":null,"SJAG_04457":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0080134","terms_by_termid":{"GO:0006282":null,"GO:0010569":null,"GO:0045739":null,"GO:1900039":null,"GO:1903138":null,"GO:1903139":null,"GO:1904293":null,"GO:1904332":null,"GO:1904547":null,"GO:2000639":null,"GO:2000640":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0088343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidic acid transfer protein Ups1","termid":"PBO:0088343"}


id: PBO:0042586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration related protein 2","termid":"PBO:0042586"}


id: PBO:0040699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 related protein A1","termid":"PBO:0040699"}


id: MONDO:0018041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other immunodeficiency syndrome with predominantly antibody defects (obsolete MONDO:0018041)","secondary_identifiers":["Orphanet:331244"],"termid":"MONDO:0018041","xrefs":{"Monarch":{"xref_id":"0018041"}}}


id: PBO:0083480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL134W/LCB3","termid":"PBO:0083480"}


id: PBO:0044469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 7 subfamily B member 1","termid":"PBO:0044469"}


id: PBO:0071625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 44","termid":"PBO:0071625"}


id: MONDO:0020797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition occurring as a result of exposure to a rapid fall in ambient pressure. Gases, nitrogen in particular, come out of solution and form bubbles in body fluid and blood. These gas bubbles accumulate in joint spaces and the peripheral circulation impairing tissue oxygenation causing disorientation, severe pain, and potentially death.","definition_xrefs":["MESH:D003665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high pressure neurological syndrome","termid":"MONDO:0002570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decompression sickness","secondary_identifiers":["MEDGEN:41434","ICD9:993.3","SCTID:89684003","UMLS:C0011119"],"synonyms":[{"name":"Bends","type":"related"},{"name":"CAISSON DIS","type":"related"},{"name":"Caisson Disease","type":"related"},{"name":"Caisson Diseases","type":"related"},{"name":"Caisson disease","type":"related"},{"name":"Compressed air disease","type":"related"},{"name":"Compressed-air disease","type":"related"},{"name":"Decompression Sickness","type":"related"},{"name":"Decompression sickness","type":"related"},{"name":"Disease, Caisson","type":"related"},{"name":"Diseases, Caisson","type":"related"},{"name":"Divers' palsy","type":"related"},{"name":"Divers' paralysis","type":"related"},{"name":"Rapture of the deep syndrome","type":"related"},{"name":"Sickness, Decompression","type":"related"},{"name":"The bends","type":"related"},{"name":"bends","type":"exact"},{"name":"caisson disease","type":"related"},{"name":"compressed-air disease","type":"related"},{"name":"decompression sickness","type":"exact"},{"name":"divers' palsy","type":"related"},{"name":"divers' paralysis","type":"related"},{"name":"the bends","type":"related"}],"termid":"MONDO:0020797","xrefs":{"Monarch":{"xref_id":"0020797"}}}


id: GO:0010158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an abaxial cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abaxial cell fate specification","termid":"GO:0010158"}


id: GO:0071066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of wind in which a mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:mah","PMID:19279637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of wind","termid":"GO:0071063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of wind","synonyms":[{"name":"detection of mechanical stimulus involved in sensory perception of air flow","type":"exact"},{"name":"detection of wind","type":"exact"},{"name":"perception of wind, detection of mechanical stimulus","type":"exact"},{"name":"perception of wind, sensory detection of mechanical stimulus","type":"exact"},{"name":"perception of wind, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during perception of wind","type":"exact"},{"name":"sensory transduction of mechanical stimulus during perception of wind","type":"exact"},{"name":"sensory transduction of wind","type":"exact"}],"termid":"GO:0071066"}


id: MONDO:0043112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"lachiewicz sibley syndrome","secondary_identifiers":["MESH:C538131","UMLS:C2931742","MEDGEN:419151"],"synonyms":[{"name":"hereditary renal disease and preauricular pits","type":"related"}],"termid":"MONDO:0043112","xrefs":{"Monarch":{"xref_id":"0043112"}}}


id: GO:0061816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of proteasomes by macroautophagy.","definition_xrefs":["PMID:26670610","GOC:dph","PMID:27477278","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"proteaphagy","termid":"GO:0061816"}


id: GO:0018978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane (DDT), a chlorinated, broad spectrum, contact insecticide, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process","termid":"GO:0018977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"anaerobic 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ddt2"],"synonyms":[{"name":"anaerobic 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolism","type":"exact"},{"name":"anaerobic DDT metabolic process","type":"exact"},{"name":"anaerobic DDT metabolism","type":"exact"}],"termid":"GO:0018978"}


id: PBO:0048826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 11","termid":"PBO:0048826"}


id: MONDO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratosis follicularis spinulosa decalvans is a rare genodermatosis occurring during infancy or childhood, predominantly affecting males, and characterized by diffuse follicular hyperkeratosis associated with progressive cicatricial alopecia of the scalp, eyebrows and eyelashes. Additional findings can include photophobia, corneal dystrophy, facial erythema, and/or palmoplantar keratoderma.","definition_xrefs":["Orphanet:2340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"},{"relation_name":"is_a","term_name":"keratosis pilaris atrophicans","termid":"MONDO:0018855"},{"relation_name":"is_a","term_name":"disorder of polyamine metabolism","termid":"MONDO:0800159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"keratosis follicularis spinulosa decalvans","secondary_identifiers":["NORD:1288","SCTID:238626006","icd11.foundation:303213910","DOID:0080753","GARD:6829","MEDGEN:83355","UMLS:C0343057","ICD9:757.39"],"synonyms":[{"name":"keratosis pilaris decalvans","type":"exact"}],"termid":"MONDO:0000136","xrefs":{"Monarch":{"xref_id":"0000136"}}}


id: PBO:0069088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 335, pseudogene","termid":"PBO:0069088"}


id: PBO:0067384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 488, pseudogene","termid":"PBO:0067384"}


id: PR:Q9HGP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bdf2 gene.","definition_xrefs":["UniProtKB:Q9HGP4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain-containing protein C631.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC631.02","synonyms":[{"name":"Spom972h-bdf2","type":"exact"}],"termid":"PR:Q9HGP4"}


id: PBO:0001447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein","termid":"PBO:0001447"}


id: GO:0031670
data:
  {"annotated_genes":["SJAG_03911","SJAG_01162","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71248,71796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"},{"annotations":[104385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient","termid":"GO:0007584"},{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01162":null,"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nutrient","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031670","terms_by_termid":{"GO:0000433":null,"GO:0036245":null}}


id: PR:000050529
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf1 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PMID:22150589","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf1/Me1(K20)","pombase_gene_id":"SPAC1834.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf1 gene translation product, initiator methionine removed monomethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf1/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf1/Me1(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf1 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050529"}


id: FYPO:0003381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular glycerol level","synonyms":[{"name":"increased cellular glycerol level during mitotic cell cycle","type":"related"},{"name":"increased cellular glycerol level during vegetative growth","type":"exact"},{"name":"increased glycerol accumulation","type":"related"}],"termid":"FYPO:0003381"}


id: PBO:0047804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box K1","termid":"PBO:0047804"}


id: FYPO:0007925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of sodium chloride and methyl methanesulfonate. Cells stop growing (and may die) at concentrations of sodium chloride and methyl methanesulfonate that allow wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to sodium chloride and methyl methanesulfonate","synonyms":[{"name":"sensitive to sodium chloride and methyl methanesulfonate  during vegetative growth","type":"exact"}],"termid":"FYPO:0007925"}


id: PBO:0071968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase B1","termid":"PBO:0071968"}


id: MOD:00469
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag heavy d10","synonyms":[{"name":"ESP-Tag heavy d10","type":"related"},{"name":"ESP:2H(10)","type":"related"}],"termid":"MOD:00469"}


id: MONDO:0800109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A interstial lung disease characterized by the presence of persistent or intermittent tachypnea (usually noticed in neonatal period or after an acute infection for the first time in first months of life), crackles in 86 %, retractions in 82%, failure to thrive in 66%, chest wall abnormalities in 22% and hypoxemia or desaturation in 88%.","definition_xrefs":["PMID:32761949","PMID:20623780","PMID:26474448","PMID:16957891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent tachypnoe of infancy","synonyms":[{"name":"PTI","type":"exact"}],"termid":"MONDO:0800109","xrefs":{"Monarch":{"xref_id":"0800109"}}}


id: GO:0051042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-independent cell-cell adhesion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of calcium-independent cell-cell adhesion","termid":"GO:0051040"},{"relation_name":"negatively_regulates","term_name":"calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules","termid":"GO:0016338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium-independent cell-cell adhesion","synonyms":[{"name":"down regulation of calcium-independent cell-cell adhesion","type":"exact"},{"name":"down-regulation of calcium-independent cell-cell adhesion","type":"exact"},{"name":"downregulation of calcium-independent cell-cell adhesion","type":"exact"},{"name":"inhibition of calcium-independent cell-cell adhesion","type":"narrow"}],"termid":"GO:0051042"}


id: MONDO:0008273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"actinic prurigo","secondary_identifiers":["MEDGEN:98348","Orphanet:330061","GARD:17510","OMIM:174770","MESH:C566780","SCTID:201015007","UMLS:C0406217","icd11.foundation:1528164728"],"synonyms":[{"name":"Hutchinson summer prurigo","type":"exact"},{"name":"actinic prurigo","type":"exact"},{"name":"familial polymorphous light eruption of American Indians","type":"exact"},{"name":"hereditary polymorphous light eruption of American Indians","type":"exact"},{"name":"hydroa aestivale","type":"exact"},{"name":"juvenile Spring eruption of ears","type":"related"},{"name":"polymorphic Light eruption, hereditary","type":"related"}],"termid":"MONDO:0008273","xrefs":{"Monarch":{"xref_id":"0008273"}}}


id: PBO:0075140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptides B and B1","termid":"PBO:0075140"}


id: PBO:0039261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1 pseudogene 3","termid":"PBO:0039261"}


id: PBO:0038689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin beta like 2","termid":"PBO:0038689"}


id: FYPO:0003926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains a larger number of sites where replication forks have converged than normal. Additional converged forks are usually detected at sites that are normally replicated unidirectionally.","definition_xrefs":["PomBase:mah","PMID:22426534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of converged replication forks","synonyms":[{"name":"increased converged forks","type":"exact"},{"name":"increased number of converged replication forks during mitotic cell cycle","type":"related"},{"name":"increased number of converged replication forks during vegetative growth","type":"exact"}],"termid":"FYPO:0003926"}


id: PBO:0062523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily S member 1","termid":"PBO:0062523"}


id: GO:0042660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or enables a cell to adopt a specific fate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"positively_regulates","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate specification","synonyms":[{"name":"activation of cell fate specification","type":"narrow"},{"name":"stimulation of cell fate specification","type":"narrow"},{"name":"up regulation of cell fate specification","type":"exact"},{"name":"up-regulation of cell fate specification","type":"exact"},{"name":"upregulation of cell fate specification","type":"exact"}],"termid":"GO:0042660"}


id: MONDO:0003718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occlusion precerebral artery","secondary_identifiers":["ICD9:433.81","UMLS:C0265090","ICD9:433.80","ICD9:433","SCTID:28790007","MEDGEN:539069","EFO:0009677","ICD9:433.3","ICD9:433.9","DOID:5976"],"synonyms":[{"name":"occlusion and stenosis of multiple and bilateral precerebral arteries","type":"related"},{"name":"occlusion and stenosis of precerebral artery","type":"related"}],"termid":"MONDO:0003718","xrefs":{"Monarch":{"xref_id":"0003718"}}}


id: PBO:0088077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves Ub-protein fusions; interacts with cofactor Bre5p to regulate transport between ER and Golgi, deubiquitinating COPII and COPI proteins, Sec23p and Sec27p; mediates steady-state retention of Golgi membrane proteins with Bre5p; phosphorylation (S695) by Hog1p regulates transcriptional activation by osmostress; inhibits Ras/PKA signaling through Ira2p; inhibits silencing; role in ribophagy; protein abundance increases in response to DNA replication stress","termid":"PBO:0088077"}


id: PBO:0040607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 5","termid":"PBO:0040607"}


id: MONDO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tracheal agenesis (TA) is a rare congenital malformation in which the trachea may be completely absent (agenesis), or partially in place but underdeveloped (atresia). In both cases, proximal-distal communication between the larynx and the alveoli of the lungs is lacking.","definition_xrefs":["Orphanet:3346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tracheal agenesis","secondary_identifiers":["NCIT:C35376","MEDGEN:266059","MESH:C536975","SCTID:3987009","GARD:5233","UMLS:C1261567"],"synonyms":[{"name":"congenital absence of trachea","type":"exact"},{"name":"congenital tracheal agenesis","type":"related"},{"name":"tracheal absence","type":"exact"}],"termid":"MONDO:0018058","xrefs":{"Monarch":{"xref_id":"0018058"}}}


id: GO:0051718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + CpG (in DNA) = S-adenosyl-L-homocysteine + 5-MeCpG (in DNA).","definition_xrefs":["PMID:15689527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140097","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates","secondary_identifiers":["Reactome:R-HSA-5334151"],"synonyms":[{"name":"HpaII methylase","type":"narrow"},{"name":"HpaII' methylase","type":"narrow"},{"name":"M.BsuRIa","type":"narrow"},{"name":"M.BsuRIb","type":"narrow"}],"termid":"GO:0051718"}


id: MONDO:0001996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"borderline glaucoma","termid":"MONDO:0004744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"steroid-induced glaucoma - borderline","secondary_identifiers":["DOID:14548","ICD9:365.03","SCTID:302895007","UMLS:C0339572","MEDGEN:573233"],"synonyms":[{"name":"borderline glaucoma steroid responder","type":"exact"},{"name":"steroid responders borderline glaucoma","type":"exact"}],"termid":"MONDO:0001996","xrefs":{"Monarch":{"xref_id":"0001996"}}}


id: MONDO:0007999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder characterized by the partial separation of the cerebral hemispheres. It is associated with mutations in the SIX3 gene.","definition_xrefs":["NCIT:C74995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 2","secondary_identifiers":["UMLS:C1834877","MEDGEN:322517","OMIM:157170","DOID:0110872","MESH:C563579"],"synonyms":[{"name":"HPE2","type":"exact"},{"name":"SIX3 holoprosencephaly","type":"exact"},{"name":"holoprosencephaly 2","type":"exact"},{"name":"holoprosencephaly caused by mutation in SIX3","type":"exact"},{"name":"holoprosencephaly type 2","type":"exact"}],"termid":"MONDO:0007999","xrefs":{"Monarch":{"xref_id":"0007999"}}}


id: GO:0090529
data:
  {"annotated_genes":["SJAG_04690","SJAG_01114","SJAG_03581","SJAG_05290","SJAG_02645","SJAG_04468","SJAG_01774","SJAG_00442","SJAG_03048","SJAG_01386","SJAG_04455","SJAG_02215","SJAG_03508","SJAG_04943","SJAG_04666","SJAG_03936","SJAG_03379","SJAG_04509","SJAG_04597","SJAG_00526","SJAG_01453","SJAG_00514","SJAG_02916","SJAG_02514","SJAG_00082","SJAG_00229","SJAG_03704","SJAG_02222","SJAG_05285","SJAG_05179","SJAG_03681","SJAG_03353","SJAG_01805","SJAG_03123","SJAG_00883","SJAG_01464","SJAG_03342","SJAG_02169","SJAG_04776","SJAG_03592","SJAG_01790","SJAG_06270","SJAG_03631","SJAG_01188"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000917"},{"annotations":[98483,101826,100119,103832,105265,107766,105281,112212,106203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140278"},{"annotations":[98860],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010974"},{"annotations":[101555],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[106395,100460,104199,115037,98862,109319,98784,92041,92126,92655,106256,106699,90931,94836,89936],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[104342,92999,88448,112494,106205,105544,117019,89075,91620,114604],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[86750,91621,93614],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[89207,101569,109667,93003,86751],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[113514,105266],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[77492,89077,87109,91625,93780],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032955"},{"annotations":[117021],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[114954],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"The assembly and arrangement of a cellular component that is composed of peptidoglycan and often chitin in addition to other materials and usually forms perpendicular to the long axis of a cell or hypha. It grows centripetally from the cell wall to the center of the cell and often functions in the compartmentalization of a cell into two daughter cells.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00442":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01453":null,"SJAG_01464":null,"SJAG_01774":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02514":null,"SJAG_02645":null,"SJAG_02916":null,"SJAG_03048":null,"SJAG_03123":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03379":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_05179":null,"SJAG_05285":null,"SJAG_05290":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"cell septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0090530"],"synonyms":[{"name":"cell septum assembly involved in cell cycle cytokinesis","type":"exact"}],"termid":"GO:0090529","terms_by_termid":{"GO:0000917":null,"GO:0010974":null,"GO:0031030":null,"GO:0031031":null,"GO:0031671":null,"GO:0032955":null,"GO:0140278":null,"GO:0140279":null,"GO:0140281":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: PBO:0040495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A and ninein interacting protein","termid":"PBO:0040495"}


id: GO:0034715
data:
  {"annotated_genes":["SJAG_03469","SJAG_02843","SJAG_03279","SJAG_00147","SJAG_02304"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88678,94366,94790,101721,109211],"is_not":false,"summary":null,"term":"GO:0034715"}]},"cv_name":"cellular_component","definition":"A protein complex that contains pICln (CLNS1A) and several Sm proteins, including SmD1, SmD2, SmE, SmF, and SmG.","definition_xrefs":["GOC:mah","PMID:11713266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03279":null,"SJAG_03469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pICln-Sm protein complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"6S pICln complex","type":"exact"}],"termid":"GO:0034715","terms_by_termid":{"GO:0034715":null}}


id: FYPO:0003742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes two or more rounds of cell division during which chromosomes segregate unequally, and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, unequal chromosome segregation","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, unequal chromosome segregation","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, unequal chromosome segregation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, unequal chromosome segregation","type":"exact"}],"termid":"FYPO:0003742"}


id: FYPO:0007390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body (SPB)-led chromosome movement in mitotic interphase takes place at an angle that varies more than normal. Normally, the SPB oscillation angle remains nearly parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:18495844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased variability of angle of spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"increased variability of angle of SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"increased variability of angle of mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"increased variability of angle of mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"increased variability of angle of mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"increased variability of angle of spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"exact"},{"name":"increased variability of angle of spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"variable trajectory angle of SPB oscillation","type":"related"}],"termid":"FYPO:0007390"}


id: MONDO:0010700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic atrophy--spastic paraplegia syndrome","secondary_identifiers":["MEDGEN:326914","UMLS:C1839565","OMIM:311100","MESH:C564084"],"synonyms":[{"name":"optic atrophy--spastic paraplegia syndrome","type":"exact"}],"termid":"MONDO:0010700","xrefs":{"Monarch":{"xref_id":"0010700"}}}


id: MONDO:0032485
data:
  {"annotated_genes":["SJAG_01778"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85755],"is_not":false,"summary":null,"term":"MONDO:0032485"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder 61","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231400","OMIM:618009","MEDGEN:1684867","GARD:18514"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER 61","type":"related"},{"name":"MRD61","type":"related"},{"name":"Mental Retardation, Autosomal Dominant 61","type":"related"}],"termid":"MONDO:0032485","terms_by_termid":{"MONDO:0032485":null},"xrefs":{"Monarch":{"xref_id":"0032485"}}}


id: PBO:0045362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 2","termid":"PBO:0045362"}


id: GO:0086046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which SA node cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"SA node cell action potential","termid":"GO:0086015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during SA node cell action potential","synonyms":[{"name":"membrane depolarization involved in regulation of SA node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of SAN cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086046"}


id: MONDO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated amyelia","secondary_identifiers":["Orphanet:268868","icd11.foundation:1787577133","GARD:20976"],"termid":"MONDO:0017088","xrefs":{"Monarch":{"xref_id":"0017088"}}}


id: MONDO:0007912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lithium transport","secondary_identifiers":["MEDGEN:331956","UMLS:C1835356","OMIM:152420"],"synonyms":[{"name":"lithium transport","type":"exact"}],"termid":"MONDO:0007912","xrefs":{"Monarch":{"xref_id":"0007912"}}}


id: PR:000085722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651, 2-136, Lys-37, MOD:00083.","definition_xrefs":["PMID:37459529","PomBase:VW","PRO:DAN"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me3(K36)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-37, MOD:00083","type":"narrow"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K36-trimethylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K36Me3","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-37, MOD:00083","type":"narrow"},{"name":"hht3/Me3(K36)","type":"exact"}],"termid":"PR:000085722"}


id: GO:0018003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the peptidyl-lysine of proteins to form the derivative peptidyl-N6-acetyl-L-lysine.","definition_xrefs":["RESID:AA0055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"internal peptidyl-lysine acetylation","termid":"GO:0018393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine N6-acetylation","termid":"GO:0018003"}


id: MONDO:0003697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"penis verrucous carcinoma","termid":"MONDO:0003698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-invasive verrucous carcinoma of the penis","secondary_identifiers":["DOID:5907","NCIT:C27791","UMLS:C1334984","MEDGEN:233765"],"synonyms":[{"name":"non-invasive penile verrucous carcinoma","type":"exact"},{"name":"non-invasive verrucous carcinoma of penis","type":"exact"},{"name":"non-invasive verrucous carcinoma of the penis","type":"exact"},{"name":"penis non-invasive verrucous carcinoma","type":"related"}],"termid":"MONDO:0003697","xrefs":{"Monarch":{"xref_id":"0003697"}}}


id: GO:0052871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-alpha-tocopherol + O2 + reduced [NADPH--hemoprotein reductase] = 13-hydroxy-alpha-tocopherol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:45108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-tocopherol omega-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11003"],"synonyms":[{"name":"alpha-tocopherol 13-hydroxylase activity","type":"exact"}],"termid":"GO:0052871"}


id: MONDO:0022888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"craniostenosis cataract","termid":"MONDO:0022888","xrefs":{"Monarch":{"xref_id":"0022888"}}}


id: GO:1903187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:19467235","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of vitellogenesis","termid":"GO:1903186"},{"relation_name":"negatively_regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vitellogenesis","synonyms":[{"name":"down regulation of vitellogenesis","type":"exact"},{"name":"down regulation of yolk production","type":"exact"},{"name":"down-regulation of vitellogenesis","type":"exact"},{"name":"down-regulation of yolk production","type":"exact"},{"name":"downregulation of vitellogenesis","type":"exact"},{"name":"downregulation of yolk production","type":"exact"},{"name":"inhibition of vitellogenesis","type":"narrow"},{"name":"inhibition of yolk production","type":"narrow"},{"name":"negative regulation of yolk production","type":"exact"}],"termid":"GO:1903187"}


id: PBO:0079793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A1 complex locus","termid":"PBO:0079793"}


id: MONDO:0971116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borderline vascular tumor","secondary_identifiers":["Orphanet:673473"],"termid":"MONDO:0971116","xrefs":{"Monarch":{"xref_id":"0971116"}}}


id: GO:0097668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Saf1 in S. cerevisiae (Pof9 in S. pombe).","definition_xrefs":["PMID:15147268","PMID:11283612","GOC:vw","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Saf1/Pof9 ubiquitin ligase complex","termid":"GO:0097668"}


id: GO:0009214
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"cyclic nucleotide metabolic process","termid":"GO:0009187"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyclic nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cyclic nucleotide breakdown","type":"exact"},{"name":"cyclic nucleotide catabolism","type":"exact"},{"name":"cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0009214","terms_by_termid":{"GO:0006198":null}}


id: MONDO:0014340
data:
  {"annotated_genes":["SJAG_02757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85859],"is_not":false,"summary":null,"term":"MONDO:0014340"}]},"cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the NUP155 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014269","GARD:16010","MEDGEN:862706","OMIM:615770"],"synonyms":[{"name":"ATFB15","type":"related"},{"name":"NUP155 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation 15","type":"exact"},{"name":"atrial fibrillation, familial, 15","type":"exact"},{"name":"atrial fibrillation, familial, type 15","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in NUP155","type":"exact"}],"termid":"MONDO:0014340","terms_by_termid":{"MONDO:0014340":null},"xrefs":{"Monarch":{"xref_id":"0014340"}}}


id: GO:0018299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a Rieske 4Fe-4S iron-sulfur cluster via bis-L-cysteinyl bis-L-histidino diiron disulfide.","definition_xrefs":["RESID:AA0225"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into the Rieske iron-sulfur cluster via bis-L-cysteinyl bis-L-histidino diiron disulfide (obsolete GO:0018299)","synonyms":[{"name":"iron incorporation into the Rieske iron-sulphur cluster via bis-L-cysteinyl bis-L-histidino diiron disulphide","type":"exact"}],"termid":"GO:0018299"}


id: GO:0075297
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110342],"is_not":false,"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043942"},{"relation_name":"negatively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0030437"],"is_obsolete":false,"name":"negative regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075297","terms_by_termid":{"GO:0075297":null}}


id: GO:0045570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the growth of the imaginal disc.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"imaginal disc growth","termid":"GO:0007446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc growth","termid":"GO:0045570"}


id: GO:0034657
data:
  {"annotated_genes":["SJAG_01678","SJAG_01886","SJAG_03385","SJAG_04309","SJAG_02197","SJAG_01637","SJAG_01472"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87504,94270,95801,96590,101052,107023,113383],"is_not":false,"summary":null,"term":"GO:0034657"}]},"cv_name":"cellular_component","definition":"A protein complex with ubiquitin ligase activity that, in Saccharomyces cerevisiae, is involved in proteasomal degradation of fructose-1,6-bisphosphatase (FBPase) and phosphoenolpyruvate carboxykinase during the transition from gluconeogenic to glycolytic growth conditions. It appears to play a broader role in cellular homeostasis and development in other species.","definition_xrefs":["PMID:18508925","PMID:35682545","PMID:12686616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01472":null,"SJAG_01637":null,"SJAG_01678":null,"SJAG_01886":null,"SJAG_02197":null,"SJAG_03385":null,"SJAG_04309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GID complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal to LisH complex","type":"exact"},{"name":"CTLH complex","type":"exact"}],"termid":"GO:0034657","terms_by_termid":{"GO:0034657":null}}


id: GO:0019842
data:
  {"annotated_genes":["SJAG_00582","SJAG_03985","SJAG_03362","SJAG_04031","SJAG_03671","SJAG_04178","SJAG_03434","SJAG_00495","SJAG_04678","SJAG_02972","SJAG_01766","SJAG_03961","SJAG_02305","SJAG_05230","SJAG_03861","SJAG_01019","SJAG_00432","SJAG_03055","SJAG_00830","SJAG_02464","SJAG_02205","SJAG_02791","SJAG_00673","SJAG_03743","SJAG_00714","SJAG_03312","SJAG_00869","SJAG_04145","SJAG_03306","SJAG_03914","SJAG_00186","SJAG_04149","SJAG_00937","SJAG_00706","SJAG_00097","SJAG_04988","SJAG_03102","SJAG_04842","SJAG_02734"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100390,93306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031177"},{"annotations":[101489,117512,59863,91420,109584,109653,110379,110959,93687,113068,98219,87056,65677,90509,66881,94974,105934,91981,98580,106042,104701,87885,64096,97550,100024,68272,90908,92832,102775,102957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030170"},{"annotations":[98723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030975"},{"annotations":[112392,96466,87720,96467,109278,110977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00706":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00869":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03362":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03743":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_03985":null,"SJAG_04031":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04842":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vitamin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0019842","terms_by_termid":{"GO:0030170":null,"GO:0030975":null,"GO:0030976":null,"GO:0031177":null}}


id: PBO:0086953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of filamentous growth; interacts with FLO11 promoter and regulates FLO11 expression; binds to transcription factors Flo8p and Mss11p; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YDL233W is not an essential gene","termid":"PBO:0086953"}


id: GO:0016482
data:
  {"annotated_genes":["SJAG_04275","SJAG_03756","SJAG_00632","SJAG_04359","SJAG_02750","SJAG_01039","SJAG_03005","SJAG_04966","SJAG_04219","SJAG_02912","SJAG_00143","SJAG_02823","SJAG_01645","SJAG_00287","SJAG_00971","SJAG_06588","SJAG_04629","SJAG_01488","SJAG_00380","SJAG_04609","SJAG_05030","SJAG_04902","SJAG_04338","SJAG_04112","SJAG_00314","SJAG_03963","SJAG_00379","SJAG_02282","SJAG_04822","SJAG_02811","SJAG_04552","SJAG_02240","SJAG_01448","SJAG_02852","SJAG_03504","SJAG_04023","SJAG_04565","SJAG_01598","SJAG_02277","SJAG_02177","SJAG_01027","SJAG_01809","SJAG_02193"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114356,115561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034498"},{"annotations":[117553,91488,99437,100304,103239,106528,117623,99102,88358,94093,112139,100751,116100,99497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006895"},{"annotations":[111593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034499"},{"annotations":[94142,96343,117624,94982,91491,96940,98962,91519,100316,117534,108331,112141,88599,108961,116102,101848,90400,97886,100896,104692,101316,106154,97393,96075,102609,106717,111919,118010,94293,118140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042147"}]},"cv_name":"biological_process","definition":"The directed movement of substances or organelles within the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00287":null,"SJAG_00314":null,"SJAG_00379":null,"SJAG_00380":null,"SJAG_00632":null,"SJAG_00971":null,"SJAG_01027":null,"SJAG_01039":null,"SJAG_01448":null,"SJAG_01488":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02193":null,"SJAG_02240":null,"SJAG_02277":null,"SJAG_02282":null,"SJAG_02750":null,"SJAG_02811":null,"SJAG_02823":null,"SJAG_02852":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03504":null,"SJAG_03756":null,"SJAG_03963":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04219":null,"SJAG_04275":null,"SJAG_04338":null,"SJAG_04359":null,"SJAG_04552":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04629":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04966":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cytosolic transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016482","terms_by_termid":{"GO:0006895":null,"GO:0034498":null,"GO:0034499":null,"GO:0042147":null}}


id: PBO:0039978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 1","termid":"PBO:0039978"}


id: PBO:0045285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 36","termid":"PBO:0045285"}


id: GO:0070803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of metula development","termid":"GO:0070802"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metula development","termid":"GO:0070803"}


id: MOD:01541
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01541"}


id: PBO:0071120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 122","termid":"PBO:0071120"}


id: PBO:0084447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannitol dehydrogenase; MAN2 has a paralog, DSF1, that arose from a segmental duplication","termid":"PBO:0084447"}


id: PBO:0059642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 8","termid":"PBO:0059642"}


id: PBO:0031616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_transposition","termid":"PBO:0031616"}


id: MONDO:0008315
data:
  {"annotated_genes":["SJAG_04885","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86538,86539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant tumor involving the prostate gland. The vast majority are carcinomas.","definition_xrefs":["NCIT:C7378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic urogenital tumor (obsolete MONDO:0017130)","termid":"MONDO:0017130"},{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"},{"relation_name":"is_a","term_name":"prostate neoplasm","termid":"MONDO:0021259"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:185","MEDGEN:138169","DOID:10283","MESH:D011471","SCTID:399068003","UMLS:C0376358"],"synonyms":[{"name":"NGP - new growth of prostate","type":"exact"},{"name":"cancer of prostate gland","type":"exact"},{"name":"hereditary prostate cancer","type":"narrow"},{"name":"malignant neoplasm of prostate","type":"exact"},{"name":"malignant neoplasm of prostate gland","type":"exact"},{"name":"malignant neoplasm of the prostate","type":"exact"},{"name":"malignant prostate gland neoplasm","type":"exact"},{"name":"malignant prostate neoplasm","type":"exact"},{"name":"malignant prostate tumor","type":"exact"},{"name":"malignant prostate tumour","type":"exact"},{"name":"malignant tumor of prostate","type":"exact"},{"name":"malignant tumor of the prostate","type":"exact"},{"name":"malignant tumour of prostate","type":"exact"},{"name":"malignant tumour of the prostate","type":"exact"},{"name":"prostate cancer, familial","type":"narrow"},{"name":"prostate gland cancer","type":"exact"},{"name":"prostate neoplasm","type":"broad"},{"name":"prostatic cancer","type":"exact"},{"name":"prostatic neoplasm","type":"broad"},{"name":"tumor of the prostate","type":"broad"},{"name":"tumour of the prostate","type":"broad"}],"termid":"MONDO:0008315","terms_by_termid":{"MONDO:0013872":null},"xrefs":{"Monarch":{"xref_id":"0008315"}}}


id: MONDO:0957481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy associated osteoporosis","termid":"MONDO:0100194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"idiopathic pregnancy-associated osteoporosis","secondary_identifiers":["Orphanet:647823","UMLS:C5782297","MEDGEN:1843391"],"termid":"MONDO:0957481","xrefs":{"Monarch":{"xref_id":"0957481"}}}


id: FYPO:0002131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects an interaction between a protein and RNA. One of the relevant gene product may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"protein-RNA interaction phenotype","synonyms":[{"name":"RNA binding phenotype","type":"exact"},{"name":"RNA-protein interaction phenotype","type":"exact"},{"name":"fission yeast RNA binding phenotype","type":"exact"},{"name":"fission yeast protein-RNA interaction phenotype","type":"exact"}],"termid":"FYPO:0002131"}


id: PBO:0086221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap185p; SAP190 has a paralog, SAP185, that arose from the whole genome duplication","termid":"PBO:0086221"}


id: MONDO:1011300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute disease, non-human animal","termid":"MONDO:1011300","xrefs":{"Monarch":{"xref_id":"1011300"}}}


id: GO:0000049
data:
  {"annotated_genes":["SJAG_04582","SJAG_00169","SJAG_00466","SJAG_01797","SJAG_03629","SJAG_04993","SJAG_04762","SJAG_01314","SJAG_00358","SJAG_02288","SJAG_03626","SJAG_00886","SJAG_03584","SJAG_02263","SJAG_01877","SJAG_04181","SJAG_03932","SJAG_02637","SJAG_02977","SJAG_01248","SJAG_03545","SJAG_02099","SJAG_04700","SJAG_04680","SJAG_02042","SJAG_02352","SJAG_03071","SJAG_03461","SJAG_01074","SJAG_04285","SJAG_00325","SJAG_04175","SJAG_04856","SJAG_01704","SJAG_01302","SJAG_02615","SJAG_04756","SJAG_02661","SJAG_00195","SJAG_00579","SJAG_04409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86952,87789,89670,91818,92920,93128,93467,93679,93867,93912,94630,94662,95283,96407,97685,97686,98602,99638,100645,101455,102071,103314,104718,104944,105023,106433,107568,108640,108831,111290,111778,112007,112667,113542,114813,115183,117055,117168,117747,118113],"is_not":false,"summary":null,"term":"GO:0000049"},{"annotations":[96428,104582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990856"}]},"cv_name":"molecular_function","definition":"Binding to a transfer RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00195":null,"SJAG_00325":null,"SJAG_00358":null,"SJAG_00466":null,"SJAG_00579":null,"SJAG_00886":null,"SJAG_01074":null,"SJAG_01248":null,"SJAG_01302":null,"SJAG_01314":null,"SJAG_01704":null,"SJAG_01797":null,"SJAG_01877":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02263":null,"SJAG_02288":null,"SJAG_02352":null,"SJAG_02615":null,"SJAG_02637":null,"SJAG_02661":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03461":null,"SJAG_03545":null,"SJAG_03584":null,"SJAG_03626":null,"SJAG_03629":null,"SJAG_03932":null,"SJAG_04175":null,"SJAG_04181":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04582":null,"SJAG_04680":null,"SJAG_04700":null,"SJAG_04756":null,"SJAG_04762":null,"SJAG_04856":null,"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000946"],"synonyms":[{"name":"base pairing with tRNA","type":"narrow"}],"termid":"GO:0000049","terms_by_termid":{"GO:0000049":null,"GO:1990856":null}}


id: SO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_array_member","synonyms":[{"name":"gene array member","type":"exact"}],"termid":"SO:0000081"}


id: PBO:0077939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha locus","termid":"PBO:0077939"}


id: GO:0051149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["CL:0000187","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"positively_regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle cell differentiation","synonyms":[{"name":"activation of muscle cell differentiation","type":"narrow"},{"name":"stimulation of muscle cell differentiation","type":"narrow"},{"name":"up regulation of muscle cell differentiation","type":"exact"},{"name":"up-regulation of muscle cell differentiation","type":"exact"},{"name":"upregulation of muscle cell differentiation","type":"exact"}],"termid":"GO:0051149"}


id: MONDO:0043237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Painful sensations in the tongue, including a sensation of burning.","definition_xrefs":["MESH:D005926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glossodynia","secondary_identifiers":["UMLS:C0017672","MEDGEN:6617","SCTID:30731004","icd11.foundation:1755751917"],"synonyms":[{"name":"Glossalgias","type":"related"},{"name":"Glossodynias","type":"related"},{"name":"Glossopyroses","type":"related"},{"name":"glossalgia","type":"related"},{"name":"glossodynia","type":"exact"},{"name":"glossopyrosis","type":"related"},{"name":"painful tongue","type":"related"},{"name":"soreness of tongue","type":"related"}],"termid":"MONDO:0043237","xrefs":{"Monarch":{"xref_id":"0043237"}}}


id: PBO:0071404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 10","termid":"PBO:0071404"}


id: GO:1904350
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein catabolic process in the vacuole.","definition_xrefs":["GOC:TermGenie","PMID:25635054","GOC:rl","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"regulates","term_name":"protein catabolic process in the vacuole","termid":"GO:0007039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of protein catabolic process in the vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of vacuolar protein breakdown","type":"related"},{"name":"regulation of vacuolar protein catabolic process","type":"related"},{"name":"regulation of vacuolar protein catabolism","type":"related"},{"name":"regulation of vacuolar protein degradation","type":"related"}],"termid":"GO:1904350","terms_by_termid":{"GO:1904352":null}}


id: MONDO:0003577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cribriform carcinoma (obsolete MONDO:0003577)","termid":"MONDO:0003577","xrefs":{"Monarch":{"xref_id":"0003577"}}}


id: FYPO:0002015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to iron ion starvation","synonyms":[{"name":"decreased growth during cellular response to iron ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to iron ion starvation","type":"exact"},{"name":"hypersensitive to iron ion starvation","type":"exact"},{"name":"sensitive to iron ion depletion","type":"exact"},{"name":"sensitive to iron ion deprivation","type":"exact"},{"name":"sensitive to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to iron ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to iron starvation","type":"exact"}],"termid":"FYPO:0002015"}


id: PBO:0060443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACC family member 2","termid":"PBO:0060443"}


id: PBO:0080514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASF1 pseudogene 1","termid":"PBO:0080514"}


id: MONDO:0023696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease with similar features to Marinesco-Sjogren syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marinesco-Sjogren-like syndrome","secondary_identifiers":["UMLS:C0796036","MEDGEN:163207","MESH:C535913","OMIM:248810"],"synonyms":[{"name":"Marinesco-Sjogren-like syndrome (MSLS)","type":"related"},{"name":"juvenile cataract, cerebellar atrophy, intellectual disability, and myopathy","type":"related"},{"name":"juvenile cataract, cerebellar atrophy, mental retardation, and myopathy","type":"related"}],"termid":"MONDO:0023696","xrefs":{"Monarch":{"xref_id":"0023696"}}}


id: GO:0018643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: carbon disulfide + NADH + H+ + O2 = [S] + H2O + NAD+ + carbonyl sulfide.","definition_xrefs":["UM-BBD_reactionID:r0599"],"gene_count":0,"genotype_count":0,"name":"obsolete carbon disulfide oxygenase activity (obsolete GO:0018643)","synonyms":[{"name":"carbon disulphide oxygenase activity","type":"exact"}],"termid":"GO:0018643"}


id: PBO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are1 (predicted)","termid":"PBO:0001480"}


id: PR:O14325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear valosin-containing protein-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23077:SF16","PRO:DNx","OMA:SCHPO03059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C16E9.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.10c","secondary_identifiers":["UniProtKB:O14325"],"synonyms":[{"name":"Spom972h-NVL","type":"exact"}],"termid":"PR:O14325"}


id: GO:0051867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of behavioral processes that occur as part of the general adaptation syndrome, the response of the body to a strong, stressful stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"general adaptation syndrome","termid":"GO:0051866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"general adaptation syndrome, behavioral process","synonyms":[{"name":"behavioral process during general adaptation syndrome","type":"exact"},{"name":"behavioral response during general adaptation syndrome","type":"exact"},{"name":"behavioural process during general adaptation syndrome","type":"exact"},{"name":"behavioural response during general adaptation syndrome","type":"exact"},{"name":"general adaptation syndrome, behavioral response","type":"exact"},{"name":"general adaptation syndrome, behavioural process","type":"exact"},{"name":"general adaptation syndrome, behavioural response","type":"exact"}],"termid":"GO:0051867"}


id: FYPO:0006072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' end of a small RNA (sRNA) molecule does not occur.","definition_xrefs":["PMID:28541282","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abolished small RNA 3' uridylation","synonyms":[{"name":"abolished sRNA 3' uridylation","type":"exact"},{"name":"abolished small RNA 3' uridylation during mitotic cell cycle","type":"related"},{"name":"abolished small RNA 3' uridylation during vegetative growth","type":"exact"},{"name":"abolished small regulatory RNA 3' uridylation","type":"exact"},{"name":"small RNA 3' uridylation abolished","type":"exact"}],"termid":"FYPO:0006072"}


id: MONDO:0013868
data:
  {"annotated_genes":["SJAG_03349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85373],"is_not":false,"summary":null,"term":"MONDO:0013868"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disseminated superficial actinic porokeratosis","termid":"MONDO:0019212"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 7, multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15838","MEDGEN:766463","OMIM:614714","UMLS:C3553549"],"synonyms":[{"name":"POROK7","type":"exact"},{"name":"porokeratosis 7, disseminated superficial actinic type","type":"exact"},{"name":"porokeratosis 7, multiple types","type":"exact"}],"termid":"MONDO:0013868","terms_by_termid":{"MONDO:0013868":null},"xrefs":{"Monarch":{"xref_id":"0013868"}}}


id: PBO:0089835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Brc1-like","termid":"PBO:0089835"}


id: GO:0033076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.","definition_xrefs":["PMID:26503307","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isoquinoline alkaloid metabolic process","synonyms":[{"name":"ipecac alkaloid metabolism","type":"related"},{"name":"isoquinoline alkaloid metabolism","type":"exact"}],"termid":"GO:0033076"}


id: GO:0019683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate catabolic process","synonyms":[{"name":"glyceraldehyde 3-phosphate catabolic process","type":"exact"},{"name":"glyceraldehyde 3-phosphate catabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate breakdown","type":"exact"},{"name":"glyceraldehyde-3-phosphate catabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate degradation","type":"exact"}],"termid":"GO:0019683"}


id: PBO:0048699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylated lysosomal membrane protein","termid":"PBO:0048699"}


id: PBO:0031477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_actin_cortical_patch_internalization","termid":"PBO:0031477"}


id: MONDO:0003690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic ependymoma occurring in adults.","definition_xrefs":["NCIT:C8269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic ependymoma","termid":"MONDO:0016700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult anaplastic ependymoma","secondary_identifiers":["MEDGEN:83709","UMLS:C0280787","DOID:5890"],"synonyms":[{"name":"adult anaplastic ependymoma","type":"exact"},{"name":"adult malignant ependymoma","type":"exact"},{"name":"anaplastic ependymoma","type":"broad"},{"name":"anaplastic ependymoma of adults","type":"exact"},{"name":"malignant adult ependymoma","type":"exact"}],"termid":"MONDO:0003690","xrefs":{"Monarch":{"xref_id":"0003690"}}}


id: PR:Q9Y7K5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7K5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C2A9.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.03","synonyms":[{"name":"Spom972h-SPBC2A9.03","type":"exact"}],"termid":"PR:Q9Y7K5"}


id: PBO:0025489
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA Like Protein","termid":"PBO:0025489"}


id: GO:0034288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a disaccharide is received and converted into a molecular signal.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbohydrate stimulus","termid":"GO:0009730"},{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of disaccharide stimulus","synonyms":[{"name":"perception of disaccharide stimulus","type":"related"}],"termid":"GO:0034288"}


id: PBO:0062638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 7 pseudogene","termid":"PBO:0062638"}


id: PBO:0018181
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Encephalopathy","termid":"PBO:0018181"}


id: GO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ascus development, a saclike structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of ascus development","termid":"GO:0075318"},{"relation_name":"negatively_regulates","term_name":"ascus development","termid":"GO:0075317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ascus development","termid":"GO:0075320"}


id: PBO:0048312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 23","termid":"PBO:0048312"}


id: GO:0098750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a FXYD domain.","definition_xrefs":["PMID:18000745","GOC:mr","PMID:16403837","GOC:dos","PMID:10950925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"FYXD domain binding","termid":"GO:0098750"}


id: GO:1900665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emodin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of emodin biosynthetic process","termid":"GO:1900664"},{"relation_name":"negatively_regulates","term_name":"emodin biosynthetic process","termid":"GO:1900575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of emodin biosynthetic process","synonyms":[{"name":"down regulation of emodin anabolism","type":"exact"},{"name":"down regulation of emodin biosynthesis","type":"exact"},{"name":"down regulation of emodin biosynthetic process","type":"exact"},{"name":"down regulation of emodin formation","type":"exact"},{"name":"down regulation of emodin synthesis","type":"exact"},{"name":"down-regulation of emodin anabolism","type":"exact"},{"name":"down-regulation of emodin biosynthesis","type":"exact"},{"name":"down-regulation of emodin biosynthetic process","type":"exact"},{"name":"down-regulation of emodin formation","type":"exact"},{"name":"down-regulation of emodin synthesis","type":"exact"},{"name":"downregulation of emodin anabolism","type":"exact"},{"name":"downregulation of emodin biosynthesis","type":"exact"},{"name":"downregulation of emodin biosynthetic process","type":"exact"},{"name":"downregulation of emodin formation","type":"exact"},{"name":"downregulation of emodin synthesis","type":"exact"},{"name":"inhibition of emodin anabolism","type":"exact"},{"name":"inhibition of emodin biosynthesis","type":"exact"},{"name":"inhibition of emodin biosynthetic process","type":"narrow"},{"name":"inhibition of emodin formation","type":"exact"},{"name":"inhibition of emodin synthesis","type":"exact"},{"name":"negative regulation of emodin anabolism","type":"exact"},{"name":"negative regulation of emodin biosynthesis","type":"exact"},{"name":"negative regulation of emodin formation","type":"exact"},{"name":"negative regulation of emodin synthesis","type":"exact"}],"termid":"GO:1900665"}


id: PR:P50530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sck1 gene.","definition_xrefs":["UniProtKB:P50530","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sck1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B9.02c","synonyms":[{"name":"Spom972h-sck1","type":"exact"}],"termid":"PR:P50530"}


id: MONDO:1012519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lethal acrodermatitis, non-human animal","termid":"MONDO:1011763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal acrodermatitis, dog","secondary_identifiers":["OMIA:002146-9615"],"termid":"MONDO:1012519","xrefs":{"Monarch":{"xref_id":"1012519"}}}


id: MONDO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrocalcinosis is a disorder that occurs when too much calcium is deposited in the kidneys. It commonly occurs in premature infants. Individuals may not have symptoms or may have symptoms related to thecondition causing nephrocalcinosis. If kidney stones are present, symptoms may include blood in the urine, fever and chills, nausea and vomiting, and severe pain in the belly area, sides of the back (flank), groin, or testicles. Later symptoms may be associated with chronic kidney failure. It may be caused by use of certain medications or supplements, infection, or any condition that leads to high levels of calcium in the blood or urine including hyperparathyroidism, renal tubular acidosis, Alport syndrome, Bartter syndrome,and a variety of other conditions. Some of the underlying disorders that can cause nephrocalcinosis are genetic, with the inheritance pattern depending on the specific disorder. Treatment differs depending on the cause of nephrocalcinosis and often aims to prevent more calcium from being deposited in the kidneys.","direct_ancestors":[{"relation_name":"is_a","term_name":"calcinosis","termid":"MONDO:0002123"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"nephrocalcinosis","secondary_identifiers":["MEDGEN:10222","ICD9:275.49","UMLS:C0027709","DOID:12679","NCIT:C84918","MESH:D009397","icd11.foundation:1359282431","SCTID:48638002"],"synonyms":[{"name":"hypercalcemic nephropathy","type":"related"}],"termid":"MONDO:0001567","xrefs":{"Monarch":{"xref_id":"0001567"}}}


id: PATO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000182 abdominal tone (obsolete PATO:0000182)","termid":"PATO:0000182"}


id: PBO:0071648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 12","termid":"PBO:0071648"}


id: GO:0046457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prostanoids, any compound based on or derived from the prostanoate structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"prostanoid metabolic process","termid":"GO:0006692"},{"relation_name":"is_a","term_name":"icosanoid biosynthetic process","termid":"GO:0046456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"prostanoid biosynthetic process","secondary_identifiers":["Wikipedia:Prostanoid#Biosynthesis"],"synonyms":[{"name":"prostanoid anabolism","type":"exact"},{"name":"prostanoid biosynthesis","type":"exact"},{"name":"prostanoid formation","type":"exact"},{"name":"prostanoid synthesis","type":"exact"}],"termid":"GO:0046457"}


id: PBO:0046297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMSY divergent transcript","termid":"PBO:0046297"}


id: GO:0140039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules as a result of an extracellular stimulus.","definition_xrefs":["PMID:14996911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion in response to extracellular stimulus","termid":"GO:0140039"}


id: PBO:0110971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CREG1 ortholog, probable oxidase, implicated in lipid metabolism, vitamin metabolism or lipoylation","termid":"PBO:0110971"}


id: GO:0031601
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex","termid":"GO:0005839"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome complex","termid":"GO:0031595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear proteasome core complex","termid":"GO:0031601"}


id: GO:0039718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory that consists of a double-membrane bound vesicle. Has a diameter of 200-300nm and is derived from the endoplasmic reticulum or Golgi apparatus. Produced by Picornaviridae, Nidovirales, Arteriviridae and Coronaviridae.","definition_xrefs":["PMID:22440839","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory","synonyms":[{"name":"DMV viral factory","type":"exact"}],"termid":"GO:0039718"}


id: MONDO:0100564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild microcytic anemia caused by variation in two of the four copies of the alpha hemoglobin genes, which can be in cis (e.g., large deletion of HBA1 and HBA2 genes) or in trans (e.g., HBA1 variant on one chromosome and HBA2 variant on the other chromosome).","direct_ancestors":[{"relation_name":"is_a","term_name":"digenic alpha thalassemia spectrum","termid":"MONDO:0100563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"HBA1; HBA2-related digenic alpha thalassemia spectrum","synonyms":[{"name":"alpha-thalassemia trait","type":"related"}],"termid":"MONDO:0100564","xrefs":{"Monarch":{"xref_id":"0100564"}}}


id: MONDO:1010247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly and cerebellar hypoplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"lymphoid system disorder, non-human animal","termid":"MONDO:1011330"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lissencephaly and cerebellar hypoplasia, non-human animal","secondary_identifiers":["OMIA:001867"],"termid":"MONDO:1010247","xrefs":{"Monarch":{"xref_id":"1010247"}}}


id: GO:0036496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation in response to stress by the dephosphorylation of eIF2 alpha.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"},{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation by eIF2 alpha dephosphorylation","termid":"GO:0036496"}


id: PBO:0043130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIBAR1 pseudogene 2","termid":"PBO:0043130"}


id: PBO:0066300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 2","termid":"PBO:0066300"}


id: GO:0010328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxin, from one side of a membrane to the other, into a cell.","definition_xrefs":["PMID:16839804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"auxin influx transmembrane transporter activity","synonyms":[{"name":"auxin influx facilitator","type":"related"}],"termid":"GO:0010328"}


id: MONDO:0019257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemochromatosis type 2 (juvenile) is the early-onset and most severe form of rare hereditary hemochromatosis (HH), a group of diseases characterized by excessive tissue iron deposition of genetic origin.","definition_xrefs":["Orphanet:79230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemochromatosis","termid":"MONDO:0006507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemochromatosis type 2","secondary_identifiers":["SCTID:50855007","DOID:0111034","UMLS:C0268060","GARD:10092","MEDGEN:82769","MESH:C537247","NORD:1315"],"synonyms":[{"name":"HFE2","type":"exact"},{"name":"JHH","type":"exact"},{"name":"Juvenile Hemochromatosis","type":"exact"},{"name":"hemochromatosis juvenile","type":"related"},{"name":"iron overload disease juvenile","type":"related"},{"name":"juvenile hemochromatosis","type":"exact"}],"termid":"MONDO:0019257","xrefs":{"Monarch":{"xref_id":"0019257"}}}


id: MONDO:0019428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare X-linked syndrome characterized by psychomotor delay, intellectual deficit, hydrocephalus, and mild facial anomalies.","definition_xrefs":["Orphanet:85335"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fried syndrome","secondary_identifiers":["GARD:16753","MEDGEN:930803","SCTID:718848000","UMLS:C4305134"],"termid":"MONDO:0019428","xrefs":{"Monarch":{"xref_id":"0019428"}}}


id: PBO:0050446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U","termid":"PBO:0050446"}


id: GO:0047435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-guanidino-2-oxopentanoate + H+ = 4-guanidinobutanal + CO2.","definition_xrefs":["RHEA:11340","EC:4.1.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-guanidino-2-oxopentanoate decarboxylase activity","secondary_identifiers":["MetaCyc:4.1.1.75-RXN","KEGG_REACTION:R03178"],"synonyms":[{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase (4-guanidinobutanal-forming)","type":"related"},{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase activity","type":"related"},{"name":"2-oxo-5-guanidinopentanoate decarboxylase activity","type":"related"},{"name":"2-oxo-5-guanidinovalerate alpha-ketoarginine decarboxylase activity","type":"related"},{"name":"alpha-ketoarginine decarboxylase activity","type":"related"}],"termid":"GO:0047435"}


id: PATO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000480 positive regulation (obsolete PATO:0000480)","termid":"PATO:0000480"}


id: PBO:0066262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 2","termid":"PBO:0066262"}


id: GO:0070033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, and complexin II (or orthologs thereof).","definition_xrefs":["PMID:7553862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex","synonyms":[{"name":"SNARE complex (Vamp2, Snap25, Stx1a, Cplx2)","type":"narrow"},{"name":"Vamp2-Snap25-Stx1a-Cplx2 complex","type":"narrow"}],"termid":"GO:0070033"}


id: GO:0047848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + dephospho-[[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase] = ADP + [[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase].","definition_xrefs":["MetaCyc:DEPHOSPHO-REDUCTASE-KINASE-KINASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete dephospho-[reductase kinase] kinase activity (obsolete GO:0047848)","synonyms":[{"name":"AMP-activated kinase activity","type":"related"},{"name":"AMP-activated protein kinase kinase activity","type":"related"},{"name":"ATP:dephospho-{hydroxymethylglutaryl-CoA reductase (NADPH)kinase} phosphotransferase activity","type":"related"},{"name":"STK30","type":"related"},{"name":"dephospho-reductase kinase kinase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase kinase (phosphorylating) activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase kinase activity","type":"related"},{"name":"reductase kinase activity","type":"broad"},{"name":"reductase kinase kinase activity","type":"related"}],"termid":"GO:0047848"}


id: MONDO:0016622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melhem-Fahl syndrome was described in two siblings born to consanguineous parents in 1985 and was characterized by the presence of 15 dorsal vertebrae and rib pairs. No other cases have been documented since the initial report.","definition_xrefs":["Orphanet:2482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Melhem-Fahl syndrome","secondary_identifiers":["GARD:3462","MEDGEN:444059","MESH:C537238","SCTID:732263008","UMLS:C2931453","icd11.foundation:999539082"],"synonyms":[{"name":"Melhem Fahl syndrome","type":"related"},{"name":"fifteen dorsal vertebrae and rib pairs","type":"related"}],"termid":"MONDO:0016622","xrefs":{"Monarch":{"xref_id":"0016622"}}}


id: PBO:0068752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 7, pseudogene","termid":"PBO:0068752"}


id: PBO:0004128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof2","termid":"PBO:0004128"}


id: PBO:0043107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity factor 8 pseudogene 1","termid":"PBO:0043107"}


id: FYPO:0000562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular respiration does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished cellular respiration","synonyms":[{"name":"abolished cellular respiration during mitotic cell cycle","type":"related"},{"name":"absent respiratory metabolism","type":"exact"},{"name":"cellular respiration abolished","type":"exact"},{"name":"cellular respiration abolished during vegetative growth","type":"exact"},{"name":"respiration abolished","type":"broad"},{"name":"respiratory metabolism abolished","type":"exact"},{"name":"respiratory metabolism: absent","type":"related"}],"termid":"FYPO:0000562"}


id: GO:1904801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron remodeling.","definition_xrefs":["PMID:21609829","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron maturation","termid":"GO:0014042"},{"relation_name":"is_a","term_name":"regulation of neuron remodeling","termid":"GO:1904799"},{"relation_name":"positively_regulates","term_name":"neuron remodeling","termid":"GO:0016322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron remodeling","synonyms":[{"name":"activation of axon pruning","type":"narrow"},{"name":"activation of neuron remodeling","type":"narrow"},{"name":"activation of neuronal remodeling","type":"narrow"},{"name":"positive regulation of axon pruning","type":"narrow"},{"name":"positive regulation of neuron remodelling","type":"exact"},{"name":"positive regulation of neuronal remodeling","type":"exact"},{"name":"up regulation of axon pruning","type":"narrow"},{"name":"up regulation of neuron remodeling","type":"exact"},{"name":"up regulation of neuronal remodeling","type":"exact"},{"name":"up-regulation of axon pruning","type":"narrow"},{"name":"up-regulation of neuron remodeling","type":"exact"},{"name":"up-regulation of neuronal remodeling","type":"exact"},{"name":"upregulation of axon pruning","type":"narrow"},{"name":"upregulation of neuron remodeling","type":"exact"},{"name":"upregulation of neuronal remodeling","type":"exact"}],"termid":"GO:1904801"}


id: PBO:0054338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1731","termid":"PBO:0054338"}


id: PBO:0077748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll interacting protein","termid":"PBO:0077748"}


id: GO:1904147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:19260726","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonylphenol","termid":"GO:1904147"}


id: PBO:0065525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 2","termid":"PBO:0065525"}


id: PBO:0003456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit, Anp family (predicted)","termid":"PBO:0003456"}


id: MONDO:0018156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 3","termid":"MONDO:0016902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3q26q27 microdeletion syndrome","secondary_identifiers":["GARD:21534","UMLS:C4755255","MEDGEN:1668723","Orphanet:356947"],"synonyms":[{"name":"3q26-q27microdeletion syndrome","type":"exact"},{"name":"Del(3)(q26q27)","type":"exact"},{"name":"monosomy 3q26-q27","type":"exact"},{"name":"monosomy 3q26q27","type":"exact"}],"termid":"MONDO:0018156","xrefs":{"Monarch":{"xref_id":"0018156"}}}


id: FYPO:0006317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis II","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis II","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis II","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis II","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0006317"}


id: PBO:0081076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 8","termid":"PBO:0081076"}


id: GO:0008978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Gly-Phe bond to release an N-terminal, basic peptide of 5-8 residues from type IV prepilin, and then N-methylates the new N-terminal amino group, the methyl donor being S-adenosyl-L-methionine.","definition_xrefs":["EC:3.4.23.43"],"gene_count":0,"genotype_count":0,"name":"obsolete prepilin peptidase activity (obsolete GO:0008978)","synonyms":[{"name":"prepilin peptidase activity","type":"exact"}],"termid":"GO:0008978"}


id: PBO:0028906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028906"}


id: GO:0042952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pathway of aromatic compound degradation by ortho-cleavage; one branch converts protocatechuate, derived from phenolic compounds, to beta-ketoadipate, and the other branch converts catechol, generated from various aromatic hydrocarbons, amino aromatics, and lignin monomers, also to beta-ketoadipate. Two additional steps accomplish the conversion of beta-ketoadipate to tricarboxylic acid cycle intermediates.","definition_xrefs":["PMID:8905091","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-ketoadipate pathway","synonyms":[{"name":"ortho-cleavage pathway","type":"broad"}],"termid":"GO:0042952"}


id: PBO:0026979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_prospore_membrane_present","termid":"PBO:0026979"}


id: PBO:0052377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 20B","termid":"PBO:0052377"}


id: PBO:0085222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pantothenate kinase, ATP:D-pantothenate 4'-phosphotransferase; catalyzes the first committed step in the universal biosynthetic pathway for synthesis of coenzyme A (CoA); transcriptionally regulated by Upc2p via a sterol response element","termid":"PBO:0085222"}


id: FYPO:0007494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of beta-D-glucan measured in the spore wall is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall beta-glucan level","termid":"FYPO:0004860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002946","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased ascospore wall beta-glucan level","synonyms":[{"name":"increased ascospore wall beta-D-glucan level","type":"exact"},{"name":"increased ascospore wall beta-glucan accumulation","type":"related"},{"name":"increased ascospore wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"increased ascospore wall beta-glucan level during vegetative growth","type":"exact"},{"name":"increased spore wall beta-glucan level","type":"exact"}],"termid":"FYPO:0007494"}


id: GO:0102954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dalcochinin-8'-O-beta-glucoside + H2O = dalcochinin + D-glucopyranose.","definition_xrefs":["PMID:16814564","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"dalcochinase activity","secondary_identifiers":["MetaCyc:RXN-9162"],"termid":"GO:0102954"}


id: PBO:0109518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPDYE1 and UBE2D4 antisense RNA 1","termid":"PBO:0109518"}


id: FYPO:0004538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more microtubules than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"microtubules present in increased numbers","synonyms":[{"name":"increased level of MTs","type":"exact"},{"name":"microtubules present in greater numbers","type":"exact"},{"name":"microtubules present in increased numbers during mitotic cell cycle","type":"related"},{"name":"microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004538"}


id: GO:0098623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: SeO3(2-) + 3NADPH + 5H+ = H2Se + 3NADP+ + 3H2O.","definition_xrefs":["PMID:1321713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"selenite reductase activity","secondary_identifiers":["Reactome:R-HSA-2408558"],"termid":"GO:0098623"}


id: GO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol efflux","termid":"GO:0010874"},{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"positively_regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol efflux","termid":"GO:0010875"}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114718],"is_not":false,"summary":null,"term":"GO:0007267"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null}}


id: MONDO:0044702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"X-linked deafness","termid":"MONDO:0020768"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked external auditory canal atresia-dilated internal auditory canal-facial dysmorphism syndrome","secondary_identifiers":["DOID:0111738","GARD:17926","MEDGEN:1648389","OMIM:301018","Orphanet:500188","UMLS:C4746975"],"synonyms":[{"name":"DFNX7","type":"exact"},{"name":"deafness, X-linked 7","type":"exact"},{"name":"deafness, X-linked 7, X-linked recessive","type":"narrow"}],"termid":"MONDO:0044702","xrefs":{"Monarch":{"xref_id":"0044702"}}}


id: PBO:0045779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial cell transforming 2 like","termid":"PBO:0045779"}


id: GO:0160190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together the peroxisome and the mitochondrial outer membrane, establishing the localization of the peroxisome close to the mitochondrion.","definition_xrefs":["PMID:38669296","PMID:29720625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"peroxisome-mitochondrion membrane tether activity","termid":"GO:0160190"}


id: GO:1900928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-threonine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-threonine import across plasma membrane","termid":"GO:1900926"},{"relation_name":"positively_regulates","term_name":"L-threonine import across plasma membrane","termid":"GO:1903807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-threonine import across plasma membrane","synonyms":[{"name":"activation of L-threonine import","type":"narrow"},{"name":"activation of L-threonine uptake","type":"narrow"},{"name":"positive regulation of L-threonine import","type":"broad"},{"name":"positive regulation of L-threonine uptake","type":"related"},{"name":"up regulation of L-threonine import","type":"exact"},{"name":"up regulation of L-threonine uptake","type":"related"},{"name":"up-regulation of L-threonine import","type":"exact"},{"name":"up-regulation of L-threonine uptake","type":"related"},{"name":"upregulation of L-threonine import","type":"exact"},{"name":"upregulation of L-threonine uptake","type":"related"}],"termid":"GO:1900928"}


id: PBO:0040181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate beta-hydroxylase domain containing 2","termid":"PBO:0040181"}


id: PBO:0084712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane half-type ABC transporter; required for respiratory growth at high temperature; localizes to vacuole membrane in response to H2O2; similar to human TAP1 and TAP2 implicated in bare lymphocyte syndrome and Wegener-like granulomatosis","termid":"PBO:0084712"}


id: GO:0031961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear cortisol receptor.","definition_xrefs":["PMID:12511169","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear glucocorticoid receptor binding","termid":"GO:0035259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nuclear cortisol receptor binding","synonyms":[{"name":"cortisol receptor binding","type":"broad"}],"termid":"GO:0031961"}


id: PBO:0083210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RPL33A/YPL143W, a component of the large (60S) ribosomal subunit","termid":"PBO:0083210"}


id: PBO:0061724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear VCP like","termid":"PBO:0061724"}


id: PATO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating in a round end, the centre of which is depressed.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blunt","termid":"PATO:0001950"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retuse","termid":"PATO:0001974"}


id: PBO:0031347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_enfumafungin","termid":"PBO:0031347"}


id: PBO:0080981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 16","termid":"PBO:0080981"}


id: GO:0043835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: uracil + H2O + acceptor = barbiturate + reduced acceptor; and thymine + H2O + acceptor = 5-methylbarbiturate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil/thymine dehydrogenase activity (obsolete GO:0043835)","synonyms":[{"name":"uracil/thymine dehydrogenase activity","type":"exact"},{"name":"uracil:acceptor oxidoreductase activity","type":"narrow"}],"termid":"GO:0043835"}


id: PBO:0050523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D11","termid":"PBO:0050523"}


id: PBO:0043988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSF2RB pseudogene 1","termid":"PBO:0043988"}


id: MONDO:0011959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sweet's syndrome (the eponym for acute febrile neutrophilic dermatosis) is characterized by a constellation of clinical symptoms, physical features, and pathologic findings which include fever, neutrophilia, tender erythematous skin lesions (papules, nodules, and plaques), and a diffuse infiltrate consisting predominantly of mature neutrophils that are typically located in the upper dermis.","definition_xrefs":["Orphanet:3243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sweet syndrome","secondary_identifiers":["MESH:D016463","NCIT:C85177","NORD:1749","UMLS:C0085077","MedDRA:10000748","DOID:0080746","ICD9:702.8","GARD:521","icd11.foundation:195212152","OMIM:608068","MEDGEN:43097","SCTID:84625002"],"synonyms":[{"name":"Afnd","type":"related"},{"name":"Gomm button disease","type":"related"},{"name":"Gomm-button disease","type":"related"},{"name":"acute febrile neutrophilic dermatosis","type":"exact"},{"name":"neutrophilic dermatosis, acute febrile","type":"related"},{"name":"sweet syndrome","type":"exact"}],"termid":"MONDO:0011959","xrefs":{"Monarch":{"xref_id":"0011959"}}}


id: MONDO:0021229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the ciliary body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary body disorder","termid":"MONDO:0002970"},{"relation_name":"is_a","term_name":"iris neoplasm","termid":"MONDO:0021224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ciliary body neoplasm","secondary_identifiers":["MEDGEN:137916","NCIT:C4364","UMLS:C0339349"],"synonyms":[{"name":"ciliary body neoplasm (disease)","type":"exact"},{"name":"ciliary body tumor","type":"exact"},{"name":"ciliary body tumour","type":"exact"},{"name":"neoplasm of ciliary body","type":"exact"},{"name":"neoplasm of the ciliary body","type":"exact"},{"name":"tumor of ciliary body","type":"exact"},{"name":"tumor of the ciliary body","type":"exact"},{"name":"tumour of ciliary body","type":"exact"},{"name":"tumour of the ciliary body","type":"exact"}],"termid":"MONDO:0021229","xrefs":{"Monarch":{"xref_id":"0021229"}}}


id: PBO:0011486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex16 family peroxisome import protein Pex16 (predicted)","termid":"PBO:0011486"}


id: SO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that has been processed \\\"incorrectly\\\", for example by the failure of splicing of one or more exons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aberrant_processed_transcript","synonyms":[{"name":"aberrant processed transcript","type":"exact"}],"termid":"SO:0000681"}


id: PBO:0083932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in cell cycle progression; activates Cdc28p kinase to promote G1 to S phase transition; plays a role in regulating transcription of other G1 cyclins, CLN1 and CLN2; regulated by phosphorylation and proteolysis; acetyl-CoA induces CLN3 transcription in response to nutrient repletion to promote cell-cycle entry; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083932"}


id: FYPO:0008286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate (1-IP7) is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular myo-inositol level","termid":"FYPO:0008284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular 1-IP7 level","termid":"FYPO:0008286"}


id: PBO:0042818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CERS6 antisense RNA 1","termid":"PBO:0042818"}


id: PBO:0059597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 9","termid":"PBO:0059597"}


id: GO:0033866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside bisphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleoside bisphosphate biosynthetic process","synonyms":[{"name":"nucleoside bisphosphate anabolism","type":"exact"},{"name":"nucleoside bisphosphate biosynthesis","type":"exact"},{"name":"nucleoside bisphosphate formation","type":"exact"},{"name":"nucleoside bisphosphatehate synthesis","type":"exact"}],"termid":"GO:0033866"}


id: GO:1902145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cell cycle checkpoint signaling","synonyms":[{"name":"regulation of G1/S transition checkpoint effector process","type":"related"},{"name":"regulation of G2/M transition checkpoint effector process","type":"related"},{"name":"regulation of cell cycle checkpoint effector process","type":"exact"},{"name":"regulation of response to G1/S transition checkpoint signaling","type":"related"},{"name":"regulation of response to G2/M transition checkpoint signaling","type":"related"},{"name":"regulation of response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"regulation of response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"regulation of response to signal involved in cell cycle checkpoint","type":"exact"}],"termid":"GO:1902145"}


id: PBO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase O (putative)","termid":"PBO:0039637"}


id: PBO:0080447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 8","termid":"PBO:0080447"}


id: PBO:0028047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_astral_microtubules","termid":"PBO:0028047"}


id: PBO:0057388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548BC","termid":"PBO:0057388"}


id: FYPO:0003690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing glycerol and ethanol as the carbon sources.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on glycerol/ethanol carbon source","termid":"FYPO:0000442"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0005447","FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell population growth on glycerol/ethanol carbon source","synonyms":[{"name":"abolished growth on glycerol/ethanol carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on glycerol/ethanol carbon source","type":"exact"},{"name":"cell population growth on glycerol/ethanol carbon source abolished","type":"exact"}],"termid":"FYPO:0003690"}


id: PBO:0064822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3D","termid":"PBO:0064822"}


id: GO:1900534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"palmitic acid metabolic process","termid":"GO:1900533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"palmitic acid catabolic process","termid":"GO:1900534"}


id: GO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replication of circular DNA following excision from the chromosome of dividing cells as they age; replication of extrachromosomal circular DNA generally occurs independently of chromosomal replication.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete replication of extrachromosomal circular DNA involved in replicative cell aging (obsolete GO:0001314)","synonyms":[{"name":"replication of extrachromosomal circular DNA during replicative cell ageing","type":"exact"},{"name":"replication of extrachromosomal circular DNA during replicative cell aging","type":"related"}],"termid":"GO:0001314"}


id: GO:0007228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates, members of the Gli protein family are activated in this way. Activation of the Gli/Ci transcription factor is distinct from its stabilization, when proteolytic cleavage is inhibited.","definition_xrefs":["PMID:11912487","PMID:15057936","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of hh target transcription factor activity (obsolete GO:0007228)","synonyms":[{"name":"activation of hh target transcription factor","type":"exact"},{"name":"positive regulation of hedgehog target transcription factor","type":"exact"}],"termid":"GO:0007228"}


id: GO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the glomerular mesangial cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric mesangial cell differentiation","termid":"GO:0061260"},{"relation_name":"is_a","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangium development","termid":"GO:0061247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}


id: MONDO:0004139
data:
  {"annotated_genes":["SJAG_04334","SJAG_03497","SJAG_02796","SJAG_00930","SJAG_00839","SJAG_04192","SJAG_02297","SJAG_01183","SJAG_05283","SJAG_02009","SJAG_01162","SJAG_04731","SJAG_04495","SJAG_01077","SJAG_00605","SJAG_02539","SJAG_04881","SJAG_03153","SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[84682,84683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[84726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[85619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008494"},{"annotations":[84687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[84528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012204"},{"annotations":[84906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[86294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[85410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[86555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859172"},{"annotations":[84697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012981"},{"annotations":[85692,85693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[85631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008493"},{"annotations":[84676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"},{"annotations":[86134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[85188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"},{"annotations":[84827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[84428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012700"},{"annotations":[86423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019107"},{"annotations":[84868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008165"},{"annotations":[85019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Anemia in which the red blood cell volume is normal.","definition_xrefs":["NCIT:C35142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_00846":null,"SJAG_00930":null,"SJAG_01077":null,"SJAG_01162":null,"SJAG_01183":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02539":null,"SJAG_02796":null,"SJAG_03153":null,"SJAG_03497":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04731":null,"SJAG_04881":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"normocytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:285.8","UMLS:C0085577","DOID:720","MEDGEN:39310","SCTID:300980002"],"synonyms":[{"name":"anaemia normocytic","type":"exact"},{"name":"anemia normocytic","type":"exact"},{"name":"normocytic Anaemia","type":"exact"},{"name":"normocytic Anemia","type":"exact"}],"termid":"MONDO:0004139","terms_by_termid":{"MONDO:0007109":null,"MONDO:0008165":null,"MONDO:0008493":null,"MONDO:0008494":null,"MONDO:0009113":null,"MONDO:0009134":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010438":null,"MONDO:0010480":null,"MONDO:0012204":null,"MONDO:0012700":null,"MONDO:0012981":null,"MONDO:0012992":null,"MONDO:0013275":null,"MONDO:0014166":null,"MONDO:0014221":null,"MONDO:0019107":null,"MONDO:0019531":null,"MONDO:0859172":null},"xrefs":{"Monarch":{"xref_id":"0004139"}}}


id: PBO:0053907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1201","termid":"PBO:0053907"}


id: PBO:0045764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase, short chain 1","termid":"PBO:0045764"}


id: PBO:0086141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for N-glycan mannosylphosphorylation; non-essential gene; transcription repressed by Rm101p; MNN14 has a paralog, MNN4, that arose from the whole genome duplication","termid":"PBO:0086141"}


id: MONDO:0009010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortic arch interruption is a rare heart defect characterized by complete lack of anatomical continuity between the transverse aortic arch and the descending thoracic aorta. AAI should be distinguished anatomically from atresia of the aortic arch where continuity between these segments is achieved by an imperforate fibrous strand of various lengths.","definition_xrefs":["Orphanet:2299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic arch interruption","secondary_identifiers":["GARD:740","NANDO:2200288","UMLS:C0152419","MEDGEN:57773","ICD10CM:Q25.21","ICD9:745.11","icd11.foundation:1769930414","MedDRA:10022599"],"termid":"MONDO:0009010","xrefs":{"Monarch":{"xref_id":"0009010"}}}


id: PBO:0070998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21","termid":"PBO:0070998"}


id: GO:2000678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}


id: PBO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L11 (predicted)","termid":"PBO:0000323"}


id: MONDO:0007928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Fechtner syndrome (obsolete MONDO:0007928)","secondary_identifiers":["NCIT:C131642"],"termid":"MONDO:0007928","xrefs":{"Monarch":{"xref_id":"0007928"}}}


id: MONDO:0005501
data:
  {"annotated_genes":["SJAG_03552","SJAG_00041","SJAG_01071","SJAG_03054","SJAG_04096","SJAG_04363","SJAG_02211","SJAG_01940","SJAG_00578","SJAG_06514","SJAG_03865","SJAG_04697","SJAG_01459","SJAG_03158","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012637"},{"annotations":[85416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013281"},{"annotations":[86257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013325"},{"annotations":[85681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013810"},{"annotations":[86162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012635"},{"annotations":[85587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957540"},{"annotations":[85467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957820"},{"annotations":[86111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054559"},{"annotations":[84784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859356"},{"annotations":[84783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859357"},{"annotations":[84842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[85811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011629"},{"annotations":[86147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010478"},{"annotations":[85380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013870"},{"annotations":[85011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014790"}]},"cv_name":"mondo","definition":"A congenital disorder of glycosylation that involves malfunctioning trimming/processing of the protein-bound oligosaccharide chain.","definition_xrefs":["DOID:0050571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00578":null,"SJAG_01071":null,"SJAG_01459":null,"SJAG_01940":null,"SJAG_01960":null,"SJAG_02211":null,"SJAG_03054":null,"SJAG_03158":null,"SJAG_03552":null,"SJAG_03865":null,"SJAG_04096":null,"SJAG_04363":null,"SJAG_04697":null,"SJAG_06514":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:212066","MEDGEN:1812737","EFO:0005546","MESH:C535747","UMLS:C5574948"],"synonyms":[{"name":"B4GALT1-CDG","type":"related"},{"name":"B4GALT1-CDG (CDG-2d)","type":"related"},{"name":"MGAT2-CDG","type":"related"},{"name":"MGAT2-CDG (CDG-2a)","type":"related"},{"name":"MOGS-CDG","type":"related"},{"name":"MOGS-CDG (CDG-2b)","type":"related"},{"name":"congenital disorder of glycosylation type II","type":"exact"},{"name":"congenital disorders of glycosylation, type II","type":"exact"}],"termid":"MONDO:0005501","terms_by_termid":{"MONDO:0009953":null,"MONDO:0010478":null,"MONDO:0011629":null,"MONDO:0012635":null,"MONDO:0012637":null,"MONDO:0013281":null,"MONDO:0013325":null,"MONDO:0013810":null,"MONDO:0013870":null,"MONDO:0014790":null,"MONDO:0054559":null,"MONDO:0859356":null,"MONDO:0859357":null,"MONDO:0957540":null,"MONDO:0957820":null},"xrefs":{"Monarch":{"xref_id":"0005501"}}}


id: GO:0014854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inactivity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inactivity","termid":"GO:0014854"}


id: GO:0034994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center attachment site. A microtubule organizing center attachment site is a region of the nuclear envelope to which a microtubule organizing center (MTOC) attaches.","definition_xrefs":["GOC:mah","PMID:18692466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"nuclear envelope organization","termid":"GO:0006998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"microtubule organizing center attachment site organization","synonyms":[{"name":"MAS organization","type":"exact"},{"name":"MTOC attachment site organization","type":"exact"},{"name":"microtubule organising centre attachment site organisation","type":"related"}],"termid":"GO:0034994"}


id: PBO:0061267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA alternative splicing regulator 1","termid":"PBO:0061267"}


id: GO:0019402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"galactitol metabolic process","synonyms":[{"name":"galactitol metabolism","type":"exact"}],"termid":"GO:0019402"}


id: GO:0045007
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94061],"is_not":false,"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The disruption of the bond between the sugar in the backbone and the A or G base, causing the base to be removed and leaving a depurinated sugar.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair, AP site formation","termid":"GO:0006285"},{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"depurination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Depurination"],"termid":"GO:0045007","terms_by_termid":{"GO:0045007":null}}


id: GO:0046469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"is_a","term_name":"ether lipid metabolic process","termid":"GO:0046485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"platelet activating factor metabolic process","synonyms":[{"name":"PAF metabolic process","type":"exact"},{"name":"PAF metabolism","type":"exact"},{"name":"platelet activating factor metabolism","type":"exact"}],"termid":"GO:0046469"}


id: PBO:0079889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine phosphorylase 2","termid":"PBO:0079889"}


id: MONDO:0003453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pre-malignant neoplasm","termid":"MONDO:0000611"},{"relation_name":"is_a","term_name":"conjunctival tumor","termid":"MONDO:0020204"},{"relation_name":"is_a","term_name":"squamous cell intraepithelial neoplasia","termid":"MONDO:0024475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival intraepithelial neoplasm","secondary_identifiers":["UMLS:C1333148","ICD9:239.89","DOID:5465","MEDGEN:234172","NCIT:C6120","SCTID:418134006"],"synonyms":[{"name":"conjunctiva intraepithelial neoplasia","type":"exact"},{"name":"conjunctival intraepithelial neoplasia","type":"exact"},{"name":"intraepithelial neoplasia of conjunctiva","type":"exact"},{"name":"intraepithelial neoplasia of the conjunctiva","type":"exact"}],"termid":"MONDO:0003453","xrefs":{"Monarch":{"xref_id":"0003453"}}}


id: GO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde-3-phosphate + H2O + 2 oxidized ferredoxin = 3-phospho-D-glycerate + 2 H+ + 2 reduced ferredoxin.","definition_xrefs":["PMID:7721730","PMID:11265456","RHEA:24148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) activity","secondary_identifiers":["EC:1.2.7.6","MetaCyc:1.2.7.6-RXN"],"synonyms":[{"name":"D-glyceraldehyde-3-phosphate:ferredoxin oxidoreductase activity","type":"exact"},{"name":"GAPOR","type":"related"},{"name":"glyceraldehyde-3-phosphate Fd oxidoreductase activity","type":"related"},{"name":"glyceraldehyde-3-phosphate ferredoxin reductase activity","type":"related"}],"termid":"GO:0043797"}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: GO:0016335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a larval imaginal disc epithelium are generated and organized.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of larval imaginal disc epithelium","termid":"GO:0016335"}


id: MONDO:0010874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enteropathy, familial, with villous edema and immunoglobulin G2 deficiency","secondary_identifiers":["MEDGEN:324980","OMIM:600351","MESH:C563949","UMLS:C1838238"],"synonyms":[{"name":"enteropathy, familial, with villous edema and immunoglobulin G2 deficiency","type":"exact"}],"termid":"MONDO:0010874","xrefs":{"Monarch":{"xref_id":"0010874"}}}


id: GO:0072761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a capsazepine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to capsazepine","termid":"GO:1901594"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to capsazepine","termid":"GO:0072761"}


id: PBO:0003780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine transporter Can1","termid":"PBO:0003780"}


id: PR:O14192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56E4.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic amino acid aminotransferase C56E4.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.03","synonyms":[{"name":"Spom972h-SPAC56E4.03","type":"exact"}],"termid":"PR:O14192"}


id: GO:0033624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of integrin activation","termid":"GO:0033623"},{"relation_name":"negatively_regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of integrin activation","synonyms":[{"name":"negative regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033624"}


id: GO:0035736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to compound eye morphogenesis.","definition_xrefs":["GOC:bf","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}


id: PBO:0072624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 10 homolog B2","termid":"PBO:0072624"}


id: PBO:0078499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 2-2","termid":"PBO:0078499"}


id: FYPO:0003484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1902967","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle","termid":"FYPO:0003186"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone","synonyms":[{"name":"abolished protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"protein absent from mitotic spindle midzone","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished","type":"exact"},{"name":"protein localization to spindle midzone abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003484"}


id: MONDO:0024661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm morphologically characterized by the presence of a villous and a tubular architectural pattern. Most often it occurs in the large intestine, small intestine, and the stomach in which the neoplastic epithelial cells show dysplastic features.","definition_xrefs":["NCIT:C4143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulovillous adenoma","secondary_identifiers":["UMLS:C0334307","ICDO:8263/0","MEDGEN:83125"],"synonyms":[{"name":"tubulovillous adenoma","type":"exact"}],"termid":"MONDO:0024661","xrefs":{"Monarch":{"xref_id":"0024661"}}}


id: PBO:0052593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 2 pseudogene 2","termid":"PBO:0052593"}


id: PBO:0005772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin family glycoprotien receptor (predicted)","termid":"PBO:0005772"}


id: GO:0070861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"regulates","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of protein exit from endoplasmic reticulum","synonyms":[{"name":"regulation of protein exit from ER","type":"exact"},{"name":"regulation of protein export from ER","type":"exact"},{"name":"regulation of protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0070861"}


id: GO:0021648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the vestibulocochlear nerve is generated and organized. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","ISBN:0838580343","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve development","termid":"GO:0021562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve morphogenesis","synonyms":[{"name":"CN VIII morphogenesis","type":"related"}],"termid":"GO:0021648"}


id: GO:0140935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone deubiquitinase that cleaves ubiquitin from the conserved C-terminal lysine residue of a histone H2B protein to which it is conjugated. The conserved lysine residue is K119 in fission yeast, K123 in budding yeast, and K120 in mammals.","definition_xrefs":["PMID:15657442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B deubiquitinase activity","termid":"GO:0140936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0016787","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H2B conserved C-terminal lysine deubiquitinase activity","synonyms":[{"name":"histone conserved C-terminal lysine deubiquitination","type":"related"}],"termid":"GO:0140935"}


id: PBO:0047705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin like 1","termid":"PBO:0047705"}


id: PBO:0045643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 1","termid":"PBO:0045643"}


id: FYPO:0001564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ornithine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular ornithine level","secondary_identifiers":["FYPO:0001618"],"synonyms":[{"name":"decreased cellular L-ornithine level","type":"exact"},{"name":"decreased cellular ornithine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular ornithine level during vegetative growth","type":"exact"},{"name":"decreased ornithine accumulation","type":"related"},{"name":"reduced cellular ornithine level","type":"exact"}],"termid":"FYPO:0001564"}


id: GO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 23-membered macrolide lactone FK506.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide binding","termid":"GO:0005527"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FK506 binding","synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"related"}],"termid":"GO:0005528"}


id: GO:0098556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the rough endoplasmic reticulum membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endoplasmic reticulum membrane","termid":"GO:0098554"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"cytoplasmic side of rough endoplasmic reticulum membrane","termid":"GO:0098556"}


id: MONDO:0100320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A SARS-CoV-2-related disease that is caused by infection by SARS-CoV-2, and manifests after the original primary infection.","definition_xrefs":["PMID:32201335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-COVID-19 disorder","termid":"MONDO:0100320","xrefs":{"Monarch":{"xref_id":"0100320"}}}


id: PBO:0074086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 3","termid":"PBO:0074086"}


id: PR:O74922
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.12 gene.","definition_xrefs":["UniProtKB:O74922","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.12","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC757.12","type":"exact"}],"termid":"PR:O74922"}


id: MONDO:0975755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eccrine angiomatous hamartoma","secondary_identifiers":["Orphanet:673568"],"termid":"MONDO:0975755","xrefs":{"Monarch":{"xref_id":"0975755"}}}


id: GO:0030760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + pyridine = N-methylpyridinium + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.87","RHEA:16893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"pyridine N-methyltransferase activity","secondary_identifiers":["MetaCyc:PYRIDINE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R02862","Reactome:R-HSA-175987"],"synonyms":[{"name":"S-adenosyl-L-methionine:pyridine N-methyltransferase activity","type":"related"},{"name":"pyridine methyltransferase activity","type":"related"}],"termid":"GO:0030760"}


id: GO:0008574
data:
  {"annotated_genes":["SJAG_00930","SJAG_00773","SJAG_02336","SJAG_04745","SJAG_00851","SJAG_01297","SJAG_00332"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74949,90357,93977,102728,102930,103082,107421],"is_not":false,"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule toward the plus end, driven by ATP hydrolysis.","definition_xrefs":["GOC:vw","PMID:32842864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule motor activity","termid":"GO:0003777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_02336":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003774"],"is_obsolete":false,"name":"plus-end-directed microtubule motor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:5.6.1.3","MetaCyc:3.6.4.4-RXN"],"synonyms":[{"name":"ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"ATP-dependent plus-end-directed microtubule motor activity","type":"exact"},{"name":"kinesin ATP phosphohydrolase (plus-end-directed)","type":"narrow"},{"name":"kinesin activity","type":"related"},{"name":"microtubule motor activity, plus-end-directed","type":"exact"},{"name":"plus-end-directed ATP-dependent microtubule motor activity","type":"exact"},{"name":"plus-end-directed kinesin ATPase activity","type":"narrow"}],"termid":"GO:0008574","terms_by_termid":{"GO:0008574":null}}


id: GO:0050368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine = 3-amino-3-(4-hydroxyphenyl)propanoate.","definition_xrefs":["RHEA:15781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-tyrosine 2,3-aminomutase activity","secondary_identifiers":["EC:5.4.3.6","KEGG_REACTION:R00739","MetaCyc:TYROSINE-23-AMINOMUTASE-RXN"],"synonyms":[{"name":"tyrosine 2,3-aminomutase activity","type":"related"},{"name":"tyrosine alpha,beta-mutase activity","type":"related"}],"termid":"GO:0050368"}


id: GO:1901806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucoside.","definition_xrefs":["PMID:15205427","PMID:8990303","GOC:TermGenie","PMID:16390337","GOC:yaf","Unipathway:UPA00237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-glucoside biosynthetic process","synonyms":[{"name":"beta-glucoside anabolism","type":"exact"},{"name":"beta-glucoside biosynthesis","type":"exact"},{"name":"beta-glucoside formation","type":"exact"},{"name":"beta-glucoside synthesis","type":"exact"}],"termid":"GO:1901806"}


id: MONDO:0014924
data:
  {"annotated_genes":["SJAG_02765"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86363],"is_not":false,"summary":null,"term":"MONDO:0014924"}]},"cv_name":"mondo","definition":"Any epilepsy, familial focal, with variable foci in which the cause of the disease is a mutation in the NPRL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02765":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081422","OMIM:617116","MEDGEN:934676","GARD:18203","UMLS:C4310709"],"synonyms":[{"name":"FFEVF2","type":"exact"},{"name":"NPRL2 epilepsy, familial focal, with variable foci","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 2","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 2; FFEVF2","type":"exact"},{"name":"epilepsy, familial focal, with variable foci caused by mutation in NPRL2","type":"exact"},{"name":"epilepsy, familial focal, with variable foci type 2","type":"exact"}],"termid":"MONDO:0014924","terms_by_termid":{"MONDO:0014924":null},"xrefs":{"Monarch":{"xref_id":"0014924"}}}


id: MONDO:0018735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human MALT1 wild-type allele is located in the vicinity of 18q21 and is approximately 79 kb in length. This allele, which encodes mucosa associated lymphoid tissue lymphoma translocation gene 1 protein, plays a role in the modulation of the nuclear factor kappa B complex signaling cascade. The gene is involved in a chromosomal translocation t(11;18)(q21;q21) with the BIRC2 gene in mucosa-associated lymphoid tissue lymphomas.","definition_xrefs":["NCIT:C60672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"multifocal lymphangioendotheliomatosis-thrombocytopenia syndrome","secondary_identifiers":["Orphanet:464321","UMLS:C5575322","GARD:10467","MEDGEN:1804470"],"synonyms":[{"name":"DKFZp434L132","type":"exact"},{"name":"MALT1 wt allele","type":"exact"},{"name":"MLT","type":"exact"},{"name":"MLT1","type":"exact"},{"name":"cutaneovisceral angiomatosis-thrombocytopenia syndrome","type":"exact"},{"name":"mucosa associated lymphoid tissue lymphoma translocation Gene 1 wt allele","type":"exact"},{"name":"multifocal lymphangioendotheliomatosis with thrombocytopenia","type":"exact"}],"termid":"MONDO:0018735","xrefs":{"Monarch":{"xref_id":"0018735"}}}


id: SO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a cyanelle, a photosynthetic plastid found in algae.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_sequence","synonyms":[{"name":"cyanelle sequence","type":"exact"}],"termid":"SO:0000746"}


id: PBO:0041721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyon neuron specific vesicular protein","termid":"PBO:0041721"}


id: PR:000085733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Ser-11, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Phos(S10)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"PRO_0000221366, Ser-11, MOD:00046","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/Phos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Ser-11, MOD:00046","type":"related"},{"name":"hht2/Phos(S10)","type":"exact"}],"termid":"PR:000085733"}


id: GO:0043183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor 1.","definition_xrefs":["GOC:st"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor binding","termid":"GO:0005172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor 1 binding","synonyms":[{"name":"Flt-1 binding","type":"exact"},{"name":"VEGF receptor 1 binding","type":"exact"},{"name":"VEGFR 1 binding","type":"exact"}],"termid":"GO:0043183"}


id: GO:2000065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid biosynthetic process","termid":"GO:0031947"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"is_a","term_name":"regulation of cortisol biosynthetic process","termid":"GO:2000064"},{"relation_name":"negatively_regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cortisol biosynthetic process","synonyms":[{"name":"negative regulation of cortisol anabolism","type":"related"},{"name":"negative regulation of cortisol biosynthesis","type":"exact"},{"name":"negative regulation of cortisol formation","type":"exact"},{"name":"negative regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000065"}


id: PBO:0049143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase pseudogene 1","termid":"PBO:0049143"}


id: PBO:0070443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 like","termid":"PBO:0070443"}


id: GO:1904966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitamin E biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:20823244","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of vitamin metabolic process","termid":"GO:0046136"},{"relation_name":"is_a","term_name":"regulation of vitamin E biosynthetic process","termid":"GO:1904965"},{"relation_name":"positively_regulates","term_name":"vitamin E biosynthetic process","termid":"GO:0010189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"positive regulation of vitamin E biosynthetic process","synonyms":[{"name":"activation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"activation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"activation of tocopherol biosynthesis","type":"narrow"},{"name":"activation of tocopherol biosynthetic process","type":"narrow"},{"name":"activation of vitamin E anabolism","type":"narrow"},{"name":"activation of vitamin E biosynthesis","type":"narrow"},{"name":"activation of vitamin E biosynthetic process","type":"narrow"},{"name":"activation of vitamin E formation","type":"narrow"},{"name":"activation of vitamin E synthesis","type":"narrow"},{"name":"positive regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"positive regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"positive regulation of tocopherol biosynthesis","type":"exact"},{"name":"positive regulation of tocopherol biosynthetic process","type":"exact"},{"name":"positive regulation of vitamin E anabolism","type":"exact"},{"name":"positive regulation of vitamin E biosynthesis","type":"exact"},{"name":"positive regulation of vitamin E formation","type":"exact"},{"name":"positive regulation of vitamin E synthesis","type":"exact"},{"name":"up regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"up regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"up regulation of tocopherol biosynthesis","type":"exact"},{"name":"up regulation of tocopherol biosynthetic process","type":"exact"},{"name":"up regulation of vitamin E anabolism","type":"exact"},{"name":"up regulation of vitamin E biosynthesis","type":"exact"},{"name":"up regulation of vitamin E biosynthetic process","type":"exact"},{"name":"up regulation of vitamin E formation","type":"exact"},{"name":"up regulation of vitamin E synthesis","type":"exact"},{"name":"up-regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"up-regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"up-regulation of tocopherol biosynthesis","type":"exact"},{"name":"up-regulation of tocopherol biosynthetic process","type":"exact"},{"name":"up-regulation of vitamin E anabolism","type":"exact"},{"name":"up-regulation of vitamin E biosynthesis","type":"exact"},{"name":"up-regulation of vitamin E biosynthetic process","type":"exact"},{"name":"up-regulation of vitamin E formation","type":"exact"},{"name":"up-regulation of vitamin E synthesis","type":"exact"},{"name":"upregulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"upregulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"upregulation of tocopherol biosynthesis","type":"exact"},{"name":"upregulation of tocopherol biosynthetic process","type":"exact"},{"name":"upregulation of vitamin E anabolism","type":"exact"},{"name":"upregulation of vitamin E biosynthesis","type":"exact"},{"name":"upregulation of vitamin E biosynthetic process","type":"exact"},{"name":"upregulation of vitamin E formation","type":"exact"},{"name":"upregulation of vitamin E synthesis","type":"exact"}],"termid":"GO:1904966"}


id: PBO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate reductase (predicted)","termid":"PBO:0002669"}


id: PBO:0045416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 5 pseudogene 1","termid":"PBO:0045416"}


id: PBO:0024482
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STaurosporine Supersensitive","termid":"PBO:0024482"}


id: FYPO:0004887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear envelope is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"},{"relation_name":"is_a","term_name":"normal protein localization to nuclear envelope","termid":"FYPO:0005612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nuclear envelope during vegetative growth","synonyms":[{"name":"normal protein localisation to nuclear envelope during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear envelope during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004887"}


id: GO:0016589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2L in mammals), a NURF301 homolog (BPTF in humans), and additional subunits, though the composition of these additional subunits varies slightly with species. NURF is involved in regulation of transcription from TRNA polymerase II promoters.","definition_xrefs":["GOC:bf","PMID:10779516","PMID:11279013","PMID:15284901","GOC:krc","PMID:16568949","PMID:21810179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"NURF complex","synonyms":[{"name":"nucleosome remodeling factor complex","type":"exact"}],"termid":"GO:0016589"}


id: MONDO:0015037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type D (LCHd) is a form of lissencephaly with cerebellar hypoplasia characterized by pronounced microcephaly (at least B1 3 SD), intellectual disability, spastic diplegia and moderate to severe cerebellar hypoplasia involving both vermis and hemispheres.","definition_xrefs":["Orphanet:100014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type D","secondary_identifiers":["icd11.foundation:1633599738","MEDGEN:895252","UMLS:C4274991","GARD:19734","SCTID:715821000"],"termid":"MONDO:0015037","xrefs":{"Monarch":{"xref_id":"0015037"}}}


id: PBO:0071325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 1","termid":"PBO:0071325"}


id: FYPO:0007858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes one or more rounds of rereplication of the entire genome without forming a mitotic spindle or undergoing cytokinesis.","definition_xrefs":["PMID:20967237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"mitotic DNA re-replication in absence of mitotic spindle","synonyms":[{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle","type":"exact"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"mitotic DNA re-replication in the absence of normal mitotic spindle assembly and cytokinesis","type":"exact"}],"termid":"FYPO:0007858"}


id: GO:0008439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Increases the activity of the enzyme monophenol monooxygenase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monophenol monooxygenase activator activity (obsolete GO:0008439)","synonyms":[{"name":"monophenol monooxygenase activator activity","type":"exact"},{"name":"prophenol oxidase activator","type":"related"}],"termid":"GO:0008439"}


id: MONDO:0009107
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86019,86020],"is_not":false,"summary":null,"term":"MONDO:0009107"}]},"cv_name":"mondo","definition":"Diastrophic dwarfism is a rare disorder marked by short stature with short extremities (final adult height is 120cm +/- 10cm), and joint malformations leading to multiple joint contractures (principally involving the shoulders, elbows, interphalangeal joints and hips).","definition_xrefs":["Orphanet:628"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with micromelia (obsolete MONDO:0018232)","termid":"MONDO:0018232"},{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"diastrophic dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:756.89","GARD:6275","MESH:C536170","NCIT:C156311","OMIM:222600","UMLS:C0220726","DOID:14687","ICD10CM:Q77.5","NORD:1051","icd11.foundation:1681550532","SCTID:58561002","MEDGEN:113103"],"synonyms":[{"name":"DD","type":"related"},{"name":"DTD","type":"related"},{"name":"diastrophic dwarfism","type":"related"},{"name":"diastrophic dysplasia","type":"exact"},{"name":"diastrophic dysplasia, Broad bone-Platyspondylic variant","type":"related"}],"termid":"MONDO:0009107","terms_by_termid":{"MONDO:0009107":null},"xrefs":{"Monarch":{"xref_id":"0009107"}}}


id: GO:0001598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chemokine receptor-like receptor activity (obsolete GO:0001598)","synonyms":[{"name":"chemokine receptor-like receptor activity","type":"exact"}],"termid":"GO:0001598"}


id: MONDO:0013300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Greatly exaggerated width of the mouth, resulting from failure of union of the maxillary and mandibular processes, with extension of the oral orifice toward the ear. The defect may be unilateral or bilateral. (Dorland, 27th ed)","definition_xrefs":["MESH:D008265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"commissural facial cleft","secondary_identifiers":["Orphanet:141276","UMLS:C3150792","OMIM:613545","GARD:16975","SCTID:40159009","icd11.foundation:1460924303","ICD9:744.83","MEDGEN:462142"],"synonyms":[{"name":"commissural cleft, isolated","type":"related"},{"name":"lateral cleft, isolated","type":"related"},{"name":"macrostomia","type":"exact"},{"name":"macrostomia, isolated","type":"related"},{"name":"transverse cleft, isolated","type":"related"}],"termid":"MONDO:0013300","xrefs":{"Monarch":{"xref_id":"0013300"}}}


id: PBO:0027903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_mitotic_G1_phase","termid":"PBO:0027903"}


id: PBO:0055939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 46","termid":"PBO:0055939"}


id: PBO:0065246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 18","termid":"PBO:0065246"}


id: GO:1901903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tyrocidine.","definition_xrefs":["GOC:yaf","PMID:9352938","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"tyrocidine metabolic process","termid":"GO:1901902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyrocidine catabolic process","synonyms":[{"name":"tyrocidine breakdown","type":"exact"},{"name":"tyrocidine catabolism","type":"exact"},{"name":"tyrocidine degradation","type":"exact"}],"termid":"GO:1901903"}


id: GO:0019419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the reduction of sulfate to another sulfur-containing ion or compound such as hydrogen sulfide, adenosine-phosphosulfate (APS) or thiosulfate.","definition_xrefs":["MetaCyc:SULFMETII-PWY"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfate reduction (obsolete GO:0019419)","synonyms":[{"name":"assimilatory sulfate reduction","type":"narrow"},{"name":"assimilatory sulphate reduction","type":"narrow"},{"name":"sulfate reduction, APS pathway","type":"narrow"},{"name":"sulphate reduction","type":"exact"},{"name":"sulphate reduction, APS pathway","type":"narrow"}],"termid":"GO:0019419"}


id: MONDO:0007386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete human coronavirus sensitivity (obsolete MONDO:0007386)","secondary_identifiers":["OMIM:122460"],"synonyms":[{"name":"Coronavirus 229E susceptibility","type":"related"},{"name":"HCVS","type":"exact"},{"name":"human coronavirus sensitivity","type":"related"}],"termid":"MONDO:0007386","xrefs":{"Monarch":{"xref_id":"0007386"}}}


id: PBO:0057091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 187","termid":"PBO:0057091"}


id: PATO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000835 auditory acuity value (obsolete PATO:0000835)","termid":"PATO:0000835"}


id: MONDO:0014389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, glycogen storage disorder characterized by polyglucosan accumulation in various tissues, manifesting with progressive proximal muscle weakness in the lower limbs and rapidly progressive, usually dilated, cardiomyopathy. Hepatic involvement and growth retardation may be associated. Early-onset immunodeficiency and autoinflammation, presenting with recurrent bacterial infections, have also been reported.","definition_xrefs":["Orphanet:397937"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuromuscular disease with dilated cardiomyopathy (obsolete MONDO:0016334)","termid":"MONDO:0016334"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neurometabolic disease (obsolete MONDO:0019058)","termid":"MONDO:0019058"},{"relation_name":"is_a","term_name":"polyglucosan body myopathy","termid":"MONDO:0000192"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"polyglucosan body myopathy 1 with or without immunodeficiency","secondary_identifiers":["MEDGEN:863042","NANDO:2200766","GARD:17643","UMLS:C4014605","OMIM:615895"],"synonyms":[{"name":"PGBM1","type":"exact"},{"name":"polyglucosan body myopathy 1 with or without immunodeficiency","type":"exact"},{"name":"polyglucosan body myopathy type 1","type":"exact"},{"name":"polyglucosan body myopathy, early-onset, with or without immunodeficiency","type":"exact"}],"termid":"MONDO:0014389","xrefs":{"Monarch":{"xref_id":"0014389"}}}


id: PR:Q10951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- byr4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein byr4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.10c","synonyms":[{"name":"Spom972h-byr4","type":"exact"}],"termid":"PR:Q10951"}


id: MONDO:0021501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the small intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal benign neoplasm","termid":"MONDO:0003062"},{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of small intestine","secondary_identifiers":["SCTID:92385005","MEDGEN:56324","ICD9:211.2","NCIT:C3600","UMLS:C0153944"],"synonyms":[{"name":"benign neoplasm of the small intestine","type":"exact"},{"name":"benign small intestinal neoplasm","type":"exact"},{"name":"benign small intestinal tumor","type":"exact"},{"name":"benign small intestinal tumour","type":"exact"},{"name":"benign small intestine neoplasm","type":"exact"},{"name":"benign small intestine tumor","type":"exact"},{"name":"benign small intestine tumour","type":"exact"},{"name":"benign tumor of small intestine","type":"exact"},{"name":"benign tumor of the small intestine","type":"exact"},{"name":"benign tumour of small intestine","type":"exact"},{"name":"benign tumour of the small intestine","type":"exact"},{"name":"small intestine benign neoplasm","type":"exact"}],"termid":"MONDO:0021501","xrefs":{"Monarch":{"xref_id":"0021501"}}}


id: PBO:0085460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted malonyl-CoA:ACP transferase; putative component of a type-II mitochondrial fatty acid synthase that produces intermediates for phospholipid remodeling","termid":"PBO:0085460"}


id: MONDO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic metabolic disorder characterized by excess urinary excretion of the purine base xanthine.","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"xanthinuria","secondary_identifiers":["UMLS:C0220988","NANDO:2200588","icd11.foundation:1565213608","SCTID:190919008","MEDGEN:450997","ICD9:277.2"],"termid":"MONDO:0000721","xrefs":{"Monarch":{"xref_id":"0000721"}}}


id: PBO:0087712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; required for proper termination of transcription for some genes; involved in telomere maintenance","termid":"PBO:0087712"}


id: PBO:0043966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin mu","termid":"PBO:0043966"}


id: FYPO:0003733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alcohol dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal alcohol dehydrogenase activity","synonyms":[{"name":"alcohol dehydrogenase (NAD) activity","type":"exact"}],"termid":"FYPO:0003733"}


id: PBO:0042844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 52","termid":"PBO:0042844"}


id: GO:0061030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland alveolus.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"},{"relation_name":"part_of","term_name":"mammary gland alveolus development","termid":"GO:0060749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in mammary gland alveolus development","termid":"GO:0061030"}


id: PBO:0050001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIRA interacting protein 3","termid":"PBO:0050001"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: PBO:0075982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 6","termid":"PBO:0075982"}


id: GO:0005223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cGMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"intracellularly cGMP-activated cation channel activity","synonyms":[{"name":"intracellular cGMP activated cation channel activity","type":"exact"},{"name":"intracellular cGMP-activated cation channel activity","type":"exact"}],"termid":"GO:0005223"}


id: GO:0016813
data:
  {"annotated_genes":["SJAG_00035","SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004037"},{"annotations":[112339,96546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004053"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2.","definition_xrefs":["EC:3.5.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016813","terms_by_termid":{"GO:0004037":null,"GO:0004053":null}}


id: PBO:0111902
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SANT subfamily","termid":"PBO:0111902"}


id: MONDO:1010993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, rabbit","secondary_identifiers":["OMIA:000487-9986"],"termid":"MONDO:1010993","xrefs":{"Monarch":{"xref_id":"1010993"}}}


id: MONDO:0014874
data:
  {"annotated_genes":["SJAG_04907"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85318],"is_not":false,"summary":null,"term":"MONDO:0014874"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the TSEN15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 2","termid":"MONDO:0016759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005559"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 2F","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310757","GARD:16178","MEDGEN:934724","DOID:0112329","OMIM:617026"],"synonyms":[{"name":"PCH2F","type":"exact"},{"name":"TSEN15 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in TSEN15","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2F","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2F; PCH2F","type":"exact"}],"termid":"MONDO:0014874","terms_by_termid":{"MONDO:0014874":null},"xrefs":{"Monarch":{"xref_id":"0014874"}}}


id: FYPO:0006438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which DNA molecules corresponding to alkylation damage repair intermediates are absent from the cell during DNA replication.","definition_xrefs":["PMID:23071723","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"alkylation damage repair intermediates absent","synonyms":[{"name":"alkylation damage repair intermediates absent during mitotic cell cycle","type":"related"},{"name":"alkylation damage repair intermediates absent during vegetative growth","type":"exact"}],"termid":"FYPO:0006438"}


id: GO:2001168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2B ubiquitination.","definition_xrefs":["PMID:12876293"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2B ubiquitination (obsolete GO:2001168)","termid":"GO:2001168"}


id: GO:0019930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-aspartic acid to form peptidyl-cis-14-hydroxy-10,13-dioxo-7-heptadecenoic acid aspartate ester, typical of the barley lipid transfer protein 1.","definition_xrefs":["RESID:AA0316"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-14-hydroxy-10,13-dioxo-7-heptadecenoic acid peptidyl-aspartate ester biosynthetic process from peptidyl-aspartic acid (obsolete GO:0019930)","synonyms":[{"name":"cis-14-hydroxy-10,13-dioxo-7-heptadecenoic acid peptidyl-aspartate ester anabolism from peptidyl-aspartic acid","type":"exact"},{"name":"cis-14-hydroxy-10,13-dioxo-7-heptadecenoic acid peptidyl-aspartate ester formation from peptidyl-aspartic acid","type":"exact"},{"name":"cis-14-hydroxy-10,13-dioxo-7-heptadecenoic acid peptidyl-aspartate ester synthesis from peptidyl-aspartic acid","type":"exact"}],"termid":"GO:0019930"}


id: MONDO:0011099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human HOXA1 syndromes is characterized by deafness, central hypoventilation, congenital ocular paralysis and developmental retardation. Cardiac anomalies and paralysis of the vocal chords may also be present. Six cases have been reported so far. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:69739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"human HOXA1 syndromes","secondary_identifiers":["SCTID:720518006","MEDGEN:330410","DOID:0050682","OMIM:601536","GARD:8333","UMLS:C1832215"],"synonyms":[{"name":"ABDS","type":"related"},{"name":"ABSD","type":"exact"},{"name":"Athabascan brainstem dysgenesis syndrome","type":"exact"},{"name":"Athabaskan brainstem dysgenesis","type":"related"},{"name":"Athabaskan brainstem dysgenesis syndrome","type":"exact"},{"name":"BSAS","type":"related"},{"name":"Bosley Salih Alorainy syndrome","type":"related"},{"name":"Bosley-Salih-Alorainy syndrome","type":"related"},{"name":"Human HOXA1 syndromes","type":"related"},{"name":"Navajo brainstem syndrome","type":"exact"}],"termid":"MONDO:0011099","xrefs":{"Monarch":{"xref_id":"0011099"}}}


id: GO:0007073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase I promoter as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis, from RNA polymerase I promoter (obsolete GO:0007073)","synonyms":[{"name":"activation of transcription on exit from mitosis, from Pol I promoter","type":"narrow"},{"name":"activation of transcription on exit from mitosis, from RNA polymerase I promoter","type":"narrow"}],"termid":"GO:0007073"}


id: FYPO:0001506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular phosphatidylcholine level","synonyms":[{"name":"normal cellular PC level","type":"exact"},{"name":"normal cellular phosphatidylcholine accumulation","type":"related"},{"name":"normal cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylcholine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001506"}


id: GO:0006884
data:
  {"annotated_genes":["SJAG_03401","SJAG_04668","SJAG_02019","SJAG_02532"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94878,104858,113054],"is_not":false,"summary":null,"term":"GO:0006884"},{"annotations":[91605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"}]},"cv_name":"biological_process","definition":"Any process involved in maintaining the steady state of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell size","termid":"GO:0008361"},{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02019":null,"SJAG_02532":null,"SJAG_03401":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell volume homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell volume","type":"exact"}],"termid":"GO:0006884","terms_by_termid":{"GO:0006884":null,"GO:0009992":null}}


id: PBO:0062696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 8 pseudogene","termid":"PBO:0062696"}


id: PBO:0053376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 302","termid":"PBO:0053376"}


id: PBO:0080689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 1","termid":"PBO:0080689"}


id: GO:0032460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"negatively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of protein oligomerization","synonyms":[{"name":"down regulation of protein oligomerization","type":"exact"},{"name":"down-regulation of protein oligomerization","type":"exact"},{"name":"downregulation of protein oligomerization","type":"exact"},{"name":"inhibition of protein oligomerization","type":"narrow"}],"termid":"GO:0032460"}


id: MONDO:0003917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal lymphoma that arises from the heart and/or the pericardium. The majority of the cases are diffuse large B-cell lymphomas. Patients may present with chest pain, heart failure, pericardial effusion, arrhythmia, or syncope.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart cancer","termid":"MONDO:0001340"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005267","MONDO:0005570"],"is_obsolete":false,"name":"heart lymphoma","secondary_identifiers":["NCIT:C5368","MEDGEN:232331","UMLS:C1332850","DOID:6547"],"synonyms":[{"name":"Cardiac lymphoma","type":"exact"},{"name":"PCL","type":"exact"},{"name":"Primary heart lymphoma","type":"exact"},{"name":"heart lymphoma","type":"exact"},{"name":"lymphoma of heart","type":"exact"},{"name":"lymphoma of the heart","type":"exact"},{"name":"primary Cardiac lymphoma","type":"exact"}],"termid":"MONDO:0003917","xrefs":{"Monarch":{"xref_id":"0003917"}}}


