# terms

id: PBO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3h (p40)","termid":"PBO:0000708"}


id: GO:0061197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the fungiform papilla are generated and organized. The fungiform papilla is a mushroom-shaped papilla of the tongue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"tongue morphogenesis","termid":"GO:0043587"},{"relation_name":"part_of","term_name":"fungiform papilla development","termid":"GO:0061196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fungiform papilla morphogenesis","termid":"GO:0061197"}


id: CHEBI:16526
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon dioxide","termid":"CHEBI:16526"}


id: FYPO:0004426
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dephosphorylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein dephosphorylation","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"termid":"FYPO:0004426","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PBO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4196 and DUF4211, human CCDC82 ortholog","termid":"PBO:0090134"}


id: MOD:00752
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with ADP-ribose through formation of a glycosidic bond.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","synonyms":[{"name":"ADP-rybosylation (from NAD)","type":"exact"},{"name":"ADPRibRes","type":"exact"}],"termid":"MOD:00752"}


id: PBO:0085866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has similarity to Torpedo californica tCTL1p, which is postulated to be a choline transporter, neither null mutation nor overexpression affects choline transport","termid":"PBO:0085866"}


id: PBO:0090195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi zinc importer, CDF family, Zrg17","termid":"PBO:0090195"}


id: MONDO:0012029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CENPJ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly 6 with or without short stature","termid":"MONDO:0700054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 6, primary, autosomal recessive","secondary_identifiers":["GARD:15431","DOID:0070290","MEDGEN:330770","MESH:C564247","OMIM:608393","UMLS:C1842109"],"synonyms":[{"name":"CENPJ autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH6","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CENPJ","type":"exact"},{"name":"microcephaly 6, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0012029","xrefs":{"Monarch":{"xref_id":"0012029"}}}


id: MOD:00984
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dichloro-L-tyrosine","termid":"MOD:01045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(35)Cl labeled 3',5'-dichlorotyrosine","termid":"MOD:00984"}


id: GO:1905031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane repolarization during cardiac muscle cell action potential.","definition_xrefs":["GOC:TermGenie","PMID:23157812","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:mtg_cardiac_conduct_nov11","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane repolarization during action potential","termid":"GO:0098903"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell membrane repolarization","termid":"GO:0099623"},{"relation_name":"regulates","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"}


id: PBO:0056126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LysM domain containing 3","termid":"PBO:0056126"}


id: PBO:0042396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine deaminase","termid":"PBO:0042396"}


id: PR:000030005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe ypt5 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt5 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC6F6.15","synonyms":[{"name":"SPAC6F6.15","type":"related"},{"name":"Spom-ypt5","type":"exact"}],"termid":"PR:000030005"}


id: PBO:0039053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 2","termid":"PBO:0039053"}


id: GO:0061388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of cell growth.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of rate of cell growth","termid":"GO:0061388"}


id: PR:O94560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- far8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1773.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.01","synonyms":[{"name":"Spom972h-far8","type":"exact"}],"termid":"PR:O94560"}


id: MONDO:0018577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pseudoxanthoma elasticum-like skin manifestations with retinitis pigmentosa","secondary_identifiers":["GARD:21820","Orphanet:436274","UMLS:C5680045","MEDGEN:1810682"],"synonyms":[{"name":"PXE-like syndrome with retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0018577","xrefs":{"Monarch":{"xref_id":"0018577"}}}


id: PR:O14228
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoribosylformylglycinamidine synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10099:SF0","OMA:SCHPO00539","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.10c","secondary_identifiers":["UniProtKB:O14228"],"synonyms":[{"name":"FGAM synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FGAMS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FGAR amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FGAR-AT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PFAS","type":"exact"},{"name":"formylglycinamide ribonucleotide amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"formylglycinamide ribotide amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14228"}


id: GO:0032196
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115674],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0141005"}]},"cv_name":"biological_process","definition":"Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites. For elements that are transcribed as the first step of transposition, the process starts with the transcription of the transposable element, its translation and maturation, and ending with integration into DNA. For elements that are cut out, the process starts with the excision of the donor DNA and integrated into another site.","definition_xrefs":["PMID:25893143","ISBN:1555812090","PMID:14682279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transposition","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Transposon"],"termid":"GO:0032196","terms_by_termid":{"GO:0141005":null}}


id: GO:0017136
data:
  {"annotated_genes":["SJAG_04186","SJAG_01075","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89260,113553,103369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[89261,103370,113554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097372"},{"annotations":[89262,103371,113555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[103372,89263,113556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[113557,89264,103373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[89265,103374,113558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-acetyl-L-lysyl-[histone] + NAD+ + H2O = L-lysyl-[protein] + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group from a histone to NAD, producing nicotinamide.","definition_xrefs":["PMID:24691964","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"},{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacetylase activity","termid":"GO:0034979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0019213","GO:0140096","GO:0016746","GO:0016740","GO:0033558"],"is_obsolete":false,"name":"histone deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone deacetylase activity","type":"exact"},{"name":"NAD-dependent histone lysine deacetylase activity","type":"exact"},{"name":"SIR2","type":"related"},{"name":"histone deacetylase activity","type":"broad"},{"name":"sirtuin","type":"narrow"}],"termid":"GO:0017136","terms_by_termid":{"GO:0032041":null,"GO:0046969":null,"GO:0046970":null,"GO:0097372":null,"GO:0140765":null,"GO:0141222":null}}


id: PBO:0091056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing RNA export factor Rsm1","termid":"PBO:0091056"}


id: GO:0034591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the rhoptry membrane.","definition_xrefs":["GOC:rph","PMID:17997128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle lumen","termid":"GO:0043233"},{"relation_name":"part_of","term_name":"rhoptry","termid":"GO:0020008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhoptry lumen","termid":"GO:0034591"}


id: MONDO:0006245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma with apocrine and less often eccrine differentiation, arising from the sweat glands. It usually presents as a solitary slow growing nodule in the dermis or subcutaneous tissues. It is characterized by a nodular growth pattern and it is often associated with necrotic changes.","definition_xrefs":["NCIT:C54664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"sweat gland carcinoma","termid":"MONDO:0005524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"hidradenocarcinoma","secondary_identifiers":["MEDGEN:137746","ICDO:8402/3","UMLS:C0334344","EFO:1000295"],"synonyms":[{"name":"clear cell eccrine carcinoma","type":"exact"},{"name":"hidradenocarcinoma","type":"exact"}],"termid":"MONDO:0006245","xrefs":{"Monarch":{"xref_id":"0006245"}}}


id: PBO:0076147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUN domain containing ossification factor","termid":"PBO:0076147"}


id: PBO:0049553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 15","termid":"PBO:0049553"}


id: GO:0035669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor 4 where the TRAM adaptor mediates transduction of the signal. Toll-like 4 receptors are pattern recognition receptors that bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:14556004","GOC:BHF","PMID:18297073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"},{"relation_name":"is_a","term_name":"TRAM-dependent toll-like receptor signaling pathway","termid":"GO:0035668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TRAM-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"TRAM-dependent TLR4 signaling pathway","type":"exact"},{"name":"TRAM-dependent toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0035669"}


id: GO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemopoietic precursor cell acquires the specialized features of a plasmacytoid dendritic cell.","definition_xrefs":["PMID:15990333","PMID:16174108","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmacytoid dendritic cell activation","termid":"GO:0002270"},{"relation_name":"is_a","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell differentiation","termid":"GO:0002273"}


id: PBO:0041225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf21 divergent transcript","termid":"PBO:0041225"}


id: GO:0052542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, a specific location during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"},{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"defense response by callose deposition","synonyms":[{"name":"callose deposition during defense response","type":"related"},{"name":"callose localization during defense response","type":"related"}],"termid":"GO:0052542"}


id: PBO:0056481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 3","termid":"PBO:0056481"}


id: GO:0032517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of superoxide dismutase 1 (SOD1) with calcineurin; complex formation is implicated in activation of calcineurin by SOD1.","definition_xrefs":["GOC:mah","PMID:17324120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SOD1-calcineurin complex","termid":"GO:0032517"}


id: GO:0009972
data:
  {"annotated_genes":["SJAG_01673","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88402,107530],"is_not":false,"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The removal of amino group in the presence of water.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidine catabolic process","termid":"GO:0006216"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cytidine deamination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009972","terms_by_termid":{"GO:0009972":null}}


id: GO:0008148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that decreases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative transcription elongation factor activity (obsolete GO:0008148)","synonyms":[{"name":"negative transcription elongation factor activity","type":"exact"}],"termid":"GO:0008148"}


id: PBO:0044072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSTB pseudogene 1","termid":"PBO:0044072"}


id: GO:0140617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epigenetic regulation of transcription by physical interaction between a cis-acting element (enhancer, silencer) of one allele on one chromosome and the promoter of the corresponding allele on the homologous chromosome. Transvection can lead to either gene activation or repression.","definition_xrefs":["PMID:24236213","PMID:33479152"],"gene_count":0,"genotype_count":0,"name":"obsolete transvection (obsolete GO:0140617)","termid":"GO:0140617"}


id: MOD:01170
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a 2-ketoimine of pyruvicacid with a residue amino group.","definition_xrefs":["Unimod:422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid iminylated residue","synonyms":[{"name":"N-pyruvic acid 2-iminyl","type":"related"},{"name":"PyruvicAcidIminyl","type":"related"}],"termid":"MOD:01170"}


id: GO:0099129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A rapid, force generating length change of an outer hair cell in response to electrical stimulation. This occurs naturally as during hearing where it serves a source of mechanical amplification.","definition_xrefs":["PMID:16887876","PMID:2187727","PMID:12239568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cochlear outer hair cell electromotile response","termid":"GO:0099129"}


id: FYECO:0000349
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which clomifene was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ clomifene","synonyms":[{"name":"+ clomiphene","type":"exact"}],"termid":"FYECO:0000349"}


id: GO:0140582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by extracellular cAMP binding to its receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:9578623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway","synonyms":[{"name":"extracellular cAMP signaling pathway","type":"exact"}],"termid":"GO:0140582"}


id: PBO:0050671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 6","termid":"PBO:0050671"}


id: PBO:0113508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Cx(9)C protein involved in cytochrome c oxidase organization; organization includes assembly or stability; localizes to the mitochondrial intermembrane space via the Mia40p-Erv1p system; interacts genetically with CYC1 and with cytochrome c oxidase assembly factors; mutation can be complemented by human COA4","termid":"PBO:0113508"}


id: PBO:0074099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 2","termid":"PBO:0074099"}


id: PBO:0064125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin family receptor for egg jelly","termid":"PBO:0064125"}


id: GO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the contraction and relaxation movements of the pharyngeal muscle that mediates feeding in nematodes.","definition_xrefs":["GOC:cab1","PMID:2181052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"regulates","term_name":"nematode pharyngeal pumping","termid":"GO:0043050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode pharyngeal pumping","termid":"GO:0043051"}


id: PBO:0062772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Z member 1 pseudogene","termid":"PBO:0062772"}


id: SO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_J_C_cluster","synonyms":[{"name":"V D DJ J C cluster","type":"exact"},{"name":"V-D-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000529"}


id: GO:0018823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexa-1,5-diene-1-carbonyl-CoA + H2O = 6-hydroxycyclohex-1-enecarbonyl-CoA.","definition_xrefs":["EC:4.2.1.100","RHEA:21856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"cyclohexa-1,5-dienecarbonyl-CoA hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0203","MetaCyc:4.2.1.100-RXN","KEGG_REACTION:R05597"],"synonyms":[{"name":"6-hydroxycyclohex-1-enecarbonyl-CoA (cyclohexa-1,5-dienecarbonyl-CoA-forming)","type":"related"},{"name":"cyclohex-1,5-diene-1-carbonyl-CoA hydratase activity","type":"exact"},{"name":"cyclohexa-1,5-diene-1-carbonyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-diene-1-carboxyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-dienecarbonyl-CoA hydro-lyase activity","type":"related"},{"name":"dienoyl-CoA hydratase activity","type":"related"}],"termid":"GO:0018823"}


id: PR:O13898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ogm1 gene.","definition_xrefs":["UniProtKB:O13898","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.07c","synonyms":[{"name":"Spom972h-ogm1","type":"exact"}],"termid":"PR:O13898"}


id: GO:0004803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transposition of transposable elements or transposons. Transposases are involved in recombination required for transposition and are site-specific for the transposon/transposable element.","definition_xrefs":["GOC:bm","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"transposase activity","secondary_identifiers":["GO:0004804"],"synonyms":[{"name":"P-element encoded transposase activity","type":"narrow"}],"termid":"GO:0004803"}


id: PBO:0110230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1/2 complex WD repeat protein Wat1/Lst8","termid":"PBO:0110230"}


id: PBO:0052293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 1 pseudogene 1","termid":"PBO:0052293"}


id: PBO:0069783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1068, pseudogene","termid":"PBO:0069783"}


id: GO:0034851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethyl-3-oxopentanoyl-CoA + CoASH = pivalyl-CoA + propanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethyl-3-oxopentanoyl-CoA 2-C-propanoyl transferase activity (obsolete GO:0034851)","termid":"GO:0034851"}


id: PBO:0034455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_UV_during_mitotic_S_phase","termid":"PBO:0034455"}


id: PBO:0082717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the p24 complex; role in misfolded protein quality control; binds to GPI anchor proteins and mediates their efficient transport from the ER to the Golgi; integral membrane protein that associates with endoplasmic reticulum-derived COPII-coated vesicles","termid":"PBO:0082717"}


id: PBO:0068612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 63, pseudogene","termid":"PBO:0068612"}


id: MONDO:0007970
data:
  {"annotated_genes":["SJAG_02342","SJAG_00993","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84713,84714,84715],"is_not":false,"summary":null,"term":"MONDO:0007970"}]},"cv_name":"mondo","definition":"Melorheostosis is a rare connective tissue disorder characterized by a sclerosing bone dysplasia, usually limited to one side of the body (rarely bilateral), that manifests with pain, stiffness, joint contractures and deformities.","definition_xrefs":["Orphanet:2485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"is_obsolete":false,"name":"melorheostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3149631","GARD:9474","MEDGEN:460981","MESH:D008557","ICD9:756.89","icd11.foundation:312433776","NANDO:2201364","OMIM:155950","DOID:4253","MedDRA:10050284","NCIT:C84887","NORD:1431","SCTID:44697002"],"synonyms":[{"name":"Mel","type":"related"},{"name":"melorheostosis, isolated","type":"related"},{"name":"melorheostosis, isolated, somatic mosaic","type":"exact"}],"termid":"MONDO:0007970","terms_by_termid":{"MONDO:0007970":null},"xrefs":{"Monarch":{"xref_id":"0007970"}}}


id: FYPO:0002331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 4 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 dimethylation during vegetative growth","termid":"FYPO:0005225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K4 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K4 dimethylation at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K4 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K4 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K4me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002331"}


id: PBO:0057037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 130a","termid":"PBO:0057037"}


id: PBO:0026637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_centromeric_chromatin_during_vegetative_growth","termid":"PBO:0026637"}


id: GO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a member of the Wnt-family of signaling molecules to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete frizzled receptor activity (obsolete GO:0004928)","synonyms":[{"name":"frizzled receptor activity","type":"exact"}],"termid":"GO:0004928"}


id: MONDO:0005991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermittent fever characterized by intervals of chills, fever, and splenomegaly each of which may last as long as 40 hours. It is caused by bartonella quintana and transmitted by the human louse.","definition_xrefs":["MESH:D014205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bartonellosis","termid":"MONDO:0005664"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trench fever","secondary_identifiers":["Orphanet:64694","icd11.foundation:1587737629","EFO:0007519","GARD:18862","MedDRA:10044582","SCTID:82214002","UMLS:C0040830","ICD10CM:A79.0","ICD9:083.1","DOID:11101","MEDGEN:21637"],"synonyms":[{"name":"Bartonella quintana caused disease or disorder","type":"exact"},{"name":"Bartonella quintana disease or disorder","type":"exact"},{"name":"Bartonella quintana infectious disease","type":"exact"},{"name":"His-Werner disease","type":"exact"},{"name":"Wolhynian fever","type":"exact"},{"name":"bartonellosis due to Bartonella quintana infection","type":"exact"},{"name":"fever, trench","type":"related"},{"name":"fevers, trench","type":"related"},{"name":"quintan fever","type":"exact"},{"name":"shin bone fever","type":"exact"},{"name":"tibialgic fever","type":"exact"},{"name":"trench fever","type":"exact"},{"name":"trench fevers","type":"related"}],"termid":"MONDO:0005991","xrefs":{"Monarch":{"xref_id":"0005991"}}}


id: FYPO:0005253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tamoxifen than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to tamoxifen","synonyms":[{"name":"resistance to tamoxifen during mitotic cell cycle","type":"related"},{"name":"resistance to tamoxifen during vegetative growth","type":"exact"},{"name":"resistant to tamoxifen","type":"exact"}],"termid":"FYPO:0005253"}


id: GO:0008413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-7,8-dihydroguanosine triphosphate (8-oxo-GTP) + H2O = 8-oxo-7,8-dihydroguanosine diphosphate (8-oxo-GDP) + phosphate. 8-oxo-7,8-dihydroguanosine triphosphate (8-oxo-GTP) is the oxidised form of the free guanine nucleotide and can act as a potent mutagenic substrate for transcription.","definition_xrefs":["RHEA:60032","PMID:15878881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0047429","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity","secondary_identifiers":["EC:3.6.1.69"],"synonyms":[{"name":"7,8-dihydro-8-oxoguanine-triphosphatase activity","type":"exact"},{"name":"8-oxo-7,8-dihydroguanine triphosphatase activity","type":"exact"},{"name":"8-oxo-7,8-dihydroguanosine triphosphatase activity","type":"exact"},{"name":"8-oxo-GTPase activity","type":"exact"}],"termid":"GO:0008413"}


id: GO:0031774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a leukotriene receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"leukotriene receptor binding","synonyms":[{"name":"leukotriene receptor ligand","type":"narrow"}],"termid":"GO:0031774"}


id: GO:0046371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP-mannose, a substance composed of mannose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dTDP-mannose metabolic process","synonyms":[{"name":"dTDP-mannose metabolism","type":"exact"}],"termid":"GO:0046371"}


id: MONDO:0015535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"xanthoma disseminatum","secondary_identifiers":["GARD:13186","MEDGEN:12178","UMLS:C0043322","Orphanet:158003","MedDRA:10052575","icd11.foundation:1785140754","SCTID:399970005"],"synonyms":[{"name":"Montgomery syndrome","type":"exact"}],"termid":"MONDO:0015535","xrefs":{"Monarch":{"xref_id":"0015535"}}}


id: PBO:0028032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_chromosome_fragmentation_upon_segregation","termid":"PBO:0028032"}


id: MONDO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes in the colon region of the large intestine (intestine, large).","definition_xrefs":["MESH:D003108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colonic disorder","secondary_identifiers":["SCTID:128524007","MEDGEN:1049","DOID:5353","UMLS:C0009373"],"synonyms":[{"name":"colon disease","type":"exact"},{"name":"colon disease or disorder","type":"exact"},{"name":"colon disorder","type":"exact"},{"name":"disease of colon","type":"exact"},{"name":"disease or disorder of colon","type":"exact"},{"name":"disorder of colon","type":"exact"}],"termid":"MONDO:0003409","xrefs":{"Monarch":{"xref_id":"0003409"}}}


id: MONDO:0020358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coloboma of optic disk (obsolete MONDO:0020358)","termid":"MONDO:0020358","xrefs":{"Monarch":{"xref_id":"0020358"}}}


id: GO:0044527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a peptidyl-cystine residue in a protein by the direct addition of H2S, followed by the removal of 2 protons to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of peptidyl-cystine persulfide by sulphur transfer from H2S (obsolete GO:0044527)","termid":"GO:0044527"}


id: PBO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Der1-like (degradation in the ER) family (predicted)","termid":"PBO:0000670"}


id: GO:0031664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031664"}


id: SO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A beta strand describes a single length of polypeptide chain that forms part of a beta sheet. A single continuous stretch of amino acids adopting an extended conformation of hydrogen bonds between the N-O and the C=O of another part of the peptide. This forms a secondary protein structure in which two or more extended polypeptide regions are hydrogen-bonded to one another in a planar array.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_strand","secondary_identifiers":["BS:00042","http://en.wikipedia.org/wiki/Beta_sheet"],"synonyms":[{"name":"strand","type":"related"}],"termid":"SO:0001111"}


id: PBO:0076545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAT antisense RNA 1","termid":"PBO:0076545"}


id: MONDO:1011468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, domestic cat","secondary_identifiers":["OMIA:000037-9685"],"termid":"MONDO:1011468","xrefs":{"Monarch":{"xref_id":"1011468"}}}


id: PATO:0001481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having an oblique or slanted direction.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sloped","termid":"PATO:0001481"}


id: PBO:0043196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 4","termid":"PBO:0043196"}


id: GO:0075119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of the host G protein-coupled receptor signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host G protein-coupled receptor signal transduction (obsolete GO:0075119)","synonyms":[{"name":"positive regulation by symbiont of host G protein-coupled receptor signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host G-protein coupled receptor protein signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host signal transduction mediated by G-protein alpha subunit","type":"narrow"},{"name":"positive regulation by symbiont of host signal transduction mediated by G-protein beta subunit","type":"narrow"},{"name":"positive regulation by symbiont of host signal transduction mediated by G-protein gamma subunit","type":"narrow"}],"termid":"GO:0075119"}


id: FYPO:0000364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal plasma membrane morphology during vegetative growth","synonyms":[{"name":"abnormal plasma membrane morphology during mitotic cell cycle","type":"related"},{"name":"plasma membrane morphology: abnormal","type":"related"}],"termid":"FYPO:0000364"}


id: PBO:0080628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 75","termid":"PBO:0080628"}


id: GO:0044582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butanol.","definition_xrefs":["GOC:tt","PMID:19539744","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"1-butanol biosynthetic process","termid":"GO:0071271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0055086","GO:0006790","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butanol","synonyms":[{"name":"butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:0044582"}


id: PBO:0030950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation","termid":"PBO:0030950"}


id: PBO:0081350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 165","termid":"PBO:0081350"}


id: PBO:0074748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 107","termid":"PBO:0074748"}


id: PBO:0065268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR29 antisense RNA 1","termid":"PBO:0065268"}


id: MOD:01157
data:
  {"annotated_genes":["SJAG_00331","SJAG_03914","SJAG_02472","SJAG_00733","SJAG_01671","SJAG_04953","SJAG_04553","SJAG_05230","SJAG_02504","SJAG_03671","SJAG_02902","SJAG_00784","SJAG_04125","SJAG_01626","SJAG_02498","SJAG_02522","SJAG_03032","SJAG_00096","SJAG_00937","SJAG_03861","SJAG_02592","SJAG_01587","SJAG_04067","SJAG_02450","SJAG_02388","SJAG_02980","SJAG_02972","SJAG_01766","SJAG_02183","SJAG_03641","SJAG_02205","SJAG_03290","SJAG_02260","SJAG_00288","SJAG_02827","SJAG_03524","SJAG_02763","SJAG_04789","SJAG_01970","SJAG_03012","SJAG_02694","SJAG_02489","SJAG_00318","SJAG_04149","SJAG_03632","SJAG_04972","SJAG_00827","SJAG_04238","SJAG_01029","SJAG_02766","SJAG_00109","SJAG_02435","SJAG_01162","SJAG_00043","SJAG_00464","SJAG_00254","SJAG_00432"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[79762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"},{"annotations":[79851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00793"},{"annotations":[79985,79898,79919,79688,79689,79670,79897,79903,79902,79770,79704,79918,79921,79707,79964,79703,79974,79983,79984,79965,79977,79745,79933,79729,79665,79731,79920,79958,79959,79924,79743,79942,79957,79773,79901,79981,79687,79696,79899,79686,79744,79963,79973,79976,79784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"},{"annotations":[79982,79857,79866,79812,79906,79917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00042"},{"annotations":[79905,79932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"},{"annotations":[79797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[79956,79796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"},{"annotations":[79730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"},{"annotations":[79758,79912,79835,79710,79829,79778,79836,79913,79936,79979,79991,79680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00128"},{"annotations":[118685,118683,118569,79828,118684,118570,118686,79827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[79870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00159"},{"annotations":[79675,79783,79779,79950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"A protein modification considered either as modified amino acid residues derived from natural amino acids, as a replacement by another natural amino acid, or as a replacement by an unnatural amino acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00318":null,"SJAG_00331":null,"SJAG_00432":null,"SJAG_00464":null,"SJAG_00733":null,"SJAG_00784":null,"SJAG_00827":null,"SJAG_00937":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01587":null,"SJAG_01626":null,"SJAG_01671":null,"SJAG_01766":null,"SJAG_01970":null,"SJAG_02183":null,"SJAG_02205":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02450":null,"SJAG_02472":null,"SJAG_02489":null,"SJAG_02498":null,"SJAG_02504":null,"SJAG_02522":null,"SJAG_02592":null,"SJAG_02694":null,"SJAG_02763":null,"SJAG_02766":null,"SJAG_02827":null,"SJAG_02902":null,"SJAG_02972":null,"SJAG_02980":null,"SJAG_03012":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_03524":null,"SJAG_03632":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04149":null,"SJAG_04238":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04953":null,"SJAG_04972":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification categorized by amino acid modified","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:01157","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00042":null,"MOD:00046":null,"MOD:00050":null,"MOD:00123":null,"MOD:00126":null,"MOD:00127":null,"MOD:00128":null,"MOD:00159":null,"MOD:00226":null,"MOD:00689":null,"MOD:00793":null,"MOD:01154":null}}


id: PBO:0108904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 1","termid":"PBO:0108904"}


id: PBO:0088233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog1","termid":"PBO:0088233"}


id: GO:1990579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of a peptidyl-serine to form peptidyl-O-phospho-L-serine on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:21317875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine autophosphorylation","termid":"GO:0036289"},{"relation_name":"is_a","term_name":"protein trans-autophosphorylation","termid":"GO:0036290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine trans-autophosphorylation","synonyms":[{"name":"serine autophosphorylation in trans","type":"exact"},{"name":"serine transautophosphorylation","type":"exact"}],"termid":"GO:1990579"}


id: MONDO:0010441
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86127],"is_not":false,"summary":null,"term":"MONDO:0010441"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"CK syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:251383","UMLS:C3151781","OMIM:300831","DOID:0111898","GARD:17210","MEDGEN:463131"],"synonyms":[{"name":"CK syndrome","type":"exact"},{"name":"CK syndrome, X-linked recessive","type":"exact"},{"name":"X-linked intellectual disability-microcephaly-cortical malformation-thin habitus syndrome","type":"exact"},{"name":"intellectual disability, X-linked, with thin body habitus and cortical malformation","type":"related"},{"name":"mental retardation, X-linked, with thin body habitus and cortical malformation","type":"related"}],"termid":"MONDO:0010441","terms_by_termid":{"MONDO:0010441":null},"xrefs":{"Monarch":{"xref_id":"0010441"}}}


id: MONDO:0007957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediosternal depigmentation line","secondary_identifiers":["UMLS:C1835085","OMIM:155200","MEDGEN:371971"],"synonyms":[{"name":"mediosternal depigmentation line","type":"exact"}],"termid":"MONDO:0007957","xrefs":{"Monarch":{"xref_id":"0007957"}}}


id: GO:0120166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing fruiting body precursors, called protoperithecia. Protoperitheicium is a spherical structure that is formed in the sexual phase of ascomycetous fungi such as Neurospora crassa and Sordaria macrospora. Protoperithecium is formed by the enveloping of ascogonia cells by sterile hyphae and it develops into perithecium.","definition_xrefs":["PMID:125266","DOI:10.1007/978-3-642-00286-1_2","PMID:25311923","PMID:4410944","PMID:6235212","PMID:20739093","PMID:6235211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoperithecium formation","termid":"GO:0120166"}


id: GO:0102707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-alanine + S-adenosyl-L-methionine = H+ + N-methyl-beta-alanine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosyl-L-methionine:beta-alanine N-methyltransferase activity (obsolete GO:0102707)","termid":"GO:0102707"}


id: PBO:0058313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4686","termid":"PBO:0058313"}


id: GO:0071519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of actin filament bundle formation that occurs in the context of assembling an actomyosin contractile ring during cytokinesis.","definition_xrefs":["GOC:mah","PMID:19713940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0007049","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"actomyosin contractile ring actin filament bundle assembly","synonyms":[{"name":"actin filament bundle assembly involved in actomyosin contractile ring formation","type":"related"},{"name":"actin filament bundle assembly involved in cytokinetic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:0071519"}


id: PBO:0054110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1475","termid":"PBO:0054110"}


id: PBO:0079993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 31","termid":"PBO:0079993"}


id: GO:0000052
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"citrulline metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"citrulline metabolism","type":"exact"}],"termid":"GO:0000052","terms_by_termid":{"GO:0019240":null}}


id: GO:0050035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-sorbose + O2 = 5-dehydro-D-fructose + H2O2.","definition_xrefs":["EC:1.1.3.11","RHEA:17853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-sorbose oxidase activity","secondary_identifiers":["KEGG_REACTION:R01695","MetaCyc:L-SORBOSE-OXIDASE-RXN"],"synonyms":[{"name":"L-sorbose:oxygen 5-oxidoreductase activity","type":"related"}],"termid":"GO:0050035"}


id: PBO:0062918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y2","termid":"PBO:0062918"}


id: PBO:0039315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase","termid":"PBO:0039315"}


id: GO:0046786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of organizing and assembling viral replication proteins in preparation for viral replication.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral replication complex formation and maintenance","termid":"GO:0046786"}


id: PBO:0059562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1F","termid":"PBO:0059562"}


id: PBO:0111802
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase family","termid":"PBO:0111802"}


id: GO:0097128
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D1 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D1-CDK4 complex","termid":"GO:0097128"}


id: FYPO:0003052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is abnormal at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:23117617","PMID:24173580","PMID:22582262","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"abnormal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"abnormal homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"abnormal synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003052"}


id: PBO:0049974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1C","termid":"PBO:0049974"}


id: GO:0060486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a club cell. A club cell is an unciliated epithelial cell found in the respiratory and terminal bronchioles.","definition_xrefs":["GOC:dph","GOC:mtg_lung","PMID:28144783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelial cell differentiation","termid":"GO:0060487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"club cell differentiation","synonyms":[{"name":"Clara cell differentiation","type":"exact"}],"termid":"GO:0060486"}


id: PR:P0CT62
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps3001 gene.","definition_xrefs":["UniProtKB:P0CT62","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.04","synonyms":[{"name":"Spom972h-rps3001","type":"exact"}],"termid":"PR:P0CT62"}


id: MONDO:0030981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 79","secondary_identifiers":["DOID:0112277","UMLS:C5543220","GARD:9523","OMIM:619238","MEDGEN:1783683"],"synonyms":[{"name":"CD4 Deficiency","type":"exact"},{"name":"IMD79","type":"exact"},{"name":"immunodeficiency 79","type":"exact"}],"termid":"MONDO:0030981","xrefs":{"Monarch":{"xref_id":"0030981"}}}


id: GO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with serotonin and transmitting the signal across the membrane by activation of the Gi/o subunit of an associated cytoplasmic heterotrimeric G protein complex. The Gi/o subunit subsequently inhibits adenylate cyclase and results in a decrease in cyclic AMP (cAMP) levels.","definition_xrefs":["PMID:18571247","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor activity","termid":"GO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"Gi/o-coupled serotonin receptor activity","synonyms":[{"name":"5-HT1 receptor activity","type":"exact"},{"name":"serotonin receptor activity, coupled via Gi/o","type":"exact"}],"termid":"GO:0001586"}


id: MOD:01549
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01549"}


id: PBO:0057941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3666","termid":"PBO:0057941"}


id: MONDO:1010914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary abnormal increase in muscular tissue caused by enlargement of existing cells in cattle due to a variation in the MSTN gene.","definition_xrefs":["OMIA:000683-9913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular hypertrophy, MSTN-related, cattle","synonyms":[{"name":"double muscling","type":"exact"}],"termid":"MONDO:1010914","xrefs":{"Monarch":{"xref_id":"1010914"}}}


id: GO:0060687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of prostate gland branching, the process in which the branching structure of the prostate gland is generated and organized. A branch is a division or offshoot from a main stem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"branching involved in prostate gland morphogenesis","termid":"GO:0060442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in prostate gland morphogenesis","termid":"GO:0060687"}


id: SO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within the splice region (1-3 bases of the exon or 3-8 bases of the intron) of a non coding transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_coding_transcript_variant","termid":"SO:0001619"},{"relation_name":"is_a","term_name":"splice_region_variant","termid":"SO:0001630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_coding_transcript_splice_region_variant","synonyms":[{"name":"ANNOVAR:ncRNA_splicing","type":"narrow"}],"termid":"SO:0002088"}


id: SO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes one or more structural features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_variant","termid":"SO:0001060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"Jannovar:structural_variant","type":"exact"},{"name":"VAT:svOverlap","type":"exact"},{"name":"structural variant","type":"related"}],"termid":"SO:0001537"}


id: MONDO:0020100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hemolytic anemia.","gene_count":0,"genotype_count":0,"name":"obsolete rare hemolytic anemia (obsolete MONDO:0020100)","secondary_identifiers":["Orphanet:98363"],"synonyms":[{"name":"rare hemolytic anemia","type":"exact"}],"termid":"MONDO:0020100","xrefs":{"Monarch":{"xref_id":"0020100"}}}


id: GO:0006250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP reduction (obsolete GO:0006250)","synonyms":[{"name":"CDP reduction","type":"exact"}],"termid":"GO:0006250"}


id: PBO:0047916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRA10A associated CGG repeat 1","termid":"PBO:0047916"}


id: GO:0016576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of phosphate groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone dephosphorylation (obsolete GO:0016576)","termid":"GO:0016576"}


id: MONDO:0025506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A worldwide emerging disease of weaned piglets first recognized in swine herds in western Canada in 1997. This syndrome is characterized by progressive weight loss, rapid (tachypnea) and difficult (dyspnea) breathing, and yellowing of skin. PMWS is caused by porcine circovirus infection, specifically type 2 or PCV-2.","definition_xrefs":["MESH:D053570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcine postweaning multisystemic wasting syndrome","synonyms":[{"name":"postweaning multisystemic wasting syndrome","type":"exact"},{"name":"postweaning multisystemic wasting syndrome, porcine","type":"exact"}],"termid":"MONDO:0025506","xrefs":{"Monarch":{"xref_id":"0025506"}}}


id: MONDO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple mitochondrial dysfunctions syndrome (obsolete MONDO:0000143)","termid":"MONDO:0000143","xrefs":{"Monarch":{"xref_id":"0000143"}}}


id: PBO:0052645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 13","termid":"PBO:0052645"}


id: PBO:0067798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 100","termid":"PBO:0067798"}


id: PBO:0066996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 299","termid":"PBO:0066996"}


id: GO:0042181
data:
  {"annotated_genes":["SJAG_00933","SJAG_00459","SJAG_01043","SJAG_01866","SJAG_00721","SJAG_04642","SJAG_06603","SJAG_01865","SJAG_04000","SJAG_01820","SJAG_04568","SJAG_01672","SJAG_01668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88398],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[118676,86921,91029,91024,107321,112878,114995,116226,88841,108430,97587,118675,102415,114002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"},{"annotations":[107322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032194"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ketones, a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_04000":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ketone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29191091":null},"synonyms":[{"name":"ketone anabolism","type":"exact"},{"name":"ketone biosynthesis","type":"exact"},{"name":"ketone formation","type":"exact"},{"name":"ketone synthesis","type":"exact"}],"termid":"GO:0042181","terms_by_termid":{"GO:0006744":null,"GO:0032194":null,"GO:1904775":null}}


id: MONDO:0010149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transcobalamin deficiency (TC) is a disorder of cobalamin transport that usually presents during the first few months of life and is characterized by megaloblastic anemia, failure to thrive, vomiting, weakness and pancytopenia.","definition_xrefs":["Orphanet:859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"inherited deficiency anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0002280","MONDO:0005046"],"is_obsolete":false,"name":"transcobalamin II deficiency","secondary_identifiers":["SCTID:237934001","NCIT:C142806","ICD10CM:D51.2","DOID:0050818","MEDGEN:137976","UMLS:C0342701","GARD:12338","OMIM:275350"],"synonyms":[{"name":"TC 2 deficiency","type":"related"},{"name":"TCN2 deficiency","type":"exact"},{"name":"Tcn2 deficiency","type":"related"},{"name":"inherited deficiency of transcobalamin","type":"exact"},{"name":"transcobalamin 2 deficiency","type":"related"},{"name":"transcobalamin II deficiency","type":"exact"},{"name":"transcobalamin deficiency","type":"related"}],"termid":"MONDO:0010149","xrefs":{"Monarch":{"xref_id":"0010149"}}}


id: PBO:0079783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A4","termid":"PBO:0079783"}


id: GO:0007000
data:
  {"annotated_genes":["SJAG_03844","SJAG_01075","SJAG_03982","SJAG_04039","SJAG_00934","SJAG_02778","SJAG_01579"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89257,111248,107316,103268,91274,112428,113552],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000183"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleolus.","definition_xrefs":["GOC:dph","GOC:jid","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_01075":null,"SJAG_01579":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null,"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleolus organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleolus organisation","type":"exact"},{"name":"nucleolus organization and biogenesis","type":"related"}],"termid":"GO:0007000","terms_by_termid":{"GO:0000183":null}}


id: MONDO:0971130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of choroid","termid":"MONDO:0021487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"choroidal osteoma","secondary_identifiers":["Orphanet:674965"],"termid":"MONDO:0971130","xrefs":{"Monarch":{"xref_id":"0971130"}}}


id: GO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045714)","synonyms":[{"name":"regulation of LDLr biosynthesis","type":"exact"},{"name":"regulation of LDLr biosynthetic process","type":"exact"},{"name":"regulation of low-density lipoprotein receptor anabolism","type":"exact"},{"name":"regulation of low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"regulation of low-density lipoprotein receptor formation","type":"exact"},{"name":"regulation of low-density lipoprotein receptor synthesis","type":"exact"}],"termid":"GO:0045714"}


id: PR:Q10357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A copper chaperone for superoxide dismutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 copper chaperone (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.04","secondary_identifiers":["UniProtKB:Q10357"],"synonyms":[{"name":"SPAC22E12.04","type":"related"},{"name":"Spom972h-CCS","type":"exact"},{"name":"pccs","type":"related"}],"termid":"PR:Q10357"}


id: MONDO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive distal osteolysis syndrome is an early-onset distal osteolysis characterized by severe resorption of the hands and feet and absence of the distal and middle phalanges. It has been described in a son and daughter born to consanguineous parents. Other manifestations include distal muscular hypertrophy, flexion contractures, short stature, mild intellectual deficit and characteristic facies (maxillary hypoplasia, exophthalmos, and a broad nasal tip). It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:2776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive distal osteolysis syndrome","secondary_identifiers":["MEDGEN:376714","SCTID:715487005","MESH:C536052","OMIM:259610","UMLS:C1850143","GARD:4299","icd11.foundation:1878981266"],"synonyms":[{"name":"Petit-Fryns syndrome","type":"exact"},{"name":"distal osteolysis-short stature-intellectual disability syndrome","type":"exact"},{"name":"osteolysis syndrome recessive","type":"related"},{"name":"osteolysis syndrome, recessive","type":"related"},{"name":"osteolysis, distal, with short stature, intellectual disability, and characteristic Facial appearance","type":"related"},{"name":"osteolysis, distal, with short stature, intellectual disability, and characteristic facial appearance","type":"related"},{"name":"osteolysis, distal, with short stature, mental retardation, and characteristic Facial appearance","type":"related"},{"name":"osteolysis, distal, with short stature, mental retardation, and characteristic facial appearance","type":"related"}],"termid":"MONDO:0009810","xrefs":{"Monarch":{"xref_id":"0009810"}}}


id: GO:0004382
data:
  {"annotated_genes":["SJAG_01595","SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99518,113095],"is_not":false,"summary":null,"term":"GO:0004382"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP + H2O = GMP + phosphate.","definition_xrefs":["RHEA:22156","PMID:2989286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01595":null,"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"GDP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.42","MetaCyc:GUANOSINE-DIPHOSPHATASE-RXN"],"synonyms":[{"name":"GDP diphosphatase activity","type":"related"},{"name":"GDP phosphohydrolase activity","type":"related"},{"name":"GDPase activity","type":"related"},{"name":"guanosine 5'-diphosphatase activity","type":"related"},{"name":"guanosine diphosphatase activity","type":"exact"},{"name":"guanosine-diphosphatase activity","type":"exact"}],"termid":"GO:0004382","terms_by_termid":{"GO:0004382":null}}


id: FYPO:0002346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the outer repeat region of the centromere is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal chromatin silencing at centromere outer repeat","synonyms":[{"name":"abnormal centromere outer repeat region chromatin silencing","type":"exact"},{"name":"abnormal chromatin silencing at centromere otr","type":"exact"},{"name":"abnormal chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abnormal chromatin silencing at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"abnormal chromatin silencing at pericentric region","type":"related"},{"name":"abnormal chromatin silencing at pericentromeric region","type":"related"},{"name":"abnormal heterochromatic silencing at centromere outer repeat region","type":"exact"},{"name":"abnormal heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0002346"}


id: PBO:0054554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1955","termid":"PBO:0054554"}


id: PBO:0082670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Dsl1p tethering complex; this complex interacts with ER SNAREs Sec20p and Use1p; mediates Sey1p-independent homotypic ER fusion; proposed to be involved in protein secretion; localizes to the ER and nuclear envelope","termid":"PBO:0082670"}


id: PBO:0113168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane peptide transporter; mediates transport of di- and tri-peptides; conserved protein that contains 12 transmembrane domains; PTR2 expression is regulated by N-end rule pathway via repression by Cup9p; targeted to vacuole via AP-3 pathway","termid":"PBO:0113168"}


id: GO:0051424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticotropin-releasing hormone, a polypeptide hormone involved in the stress response. It is released by the hypothalamus and stimulates the release of corticotropin by the anterior pituitary gland.","definition_xrefs":["PMID:7556876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"corticotropin-releasing hormone binding","secondary_identifiers":["GO:0017047"],"synonyms":[{"name":"CRF binding","type":"exact"},{"name":"CRH binding","type":"exact"},{"name":"corticoliberin binding","type":"exact"},{"name":"corticotropin-releasing factor binding","type":"exact"}],"termid":"GO:0051424"}


id: MONDO:1010485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, cattle","secondary_identifiers":["OMIA:000994-9913"],"termid":"MONDO:1010485","xrefs":{"Monarch":{"xref_id":"1010485"}}}


id: MONDO:0008080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"schwannomatosis","termid":"MONDO:0008075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"neurofibromatosis, type III, mixed central and peripheral","secondary_identifiers":["SCTID:254240003","UMLS:C2931480","OMIM:162260","MEDGEN:419422","GARD:15094","MESH:C537389"],"synonyms":[{"name":"NF3A","type":"related"},{"name":"Nf 3","type":"related"},{"name":"neurofibromas, palmar cutaneous","type":"related"},{"name":"neurofibromatosis, type III, Riccardi type","type":"related"},{"name":"neurofibromatosis, type III, mixed central and peripheral","type":"exact"},{"name":"neurofibromatosis, type III, of Riccardi","type":"related"}],"termid":"MONDO:0008080","xrefs":{"Monarch":{"xref_id":"0008080"}}}


id: GO:0039596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of dephosphorylation of a host protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein dephosphorylation (obsolete GO:0039596)","termid":"GO:0039596"}


id: PBO:0064000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 34","termid":"PBO:0064000"}


id: PBO:0052391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 28, pseudogene","termid":"PBO:0052391"}


id: PBO:0055448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2880","termid":"PBO:0055448"}


id: MONDO:0016199
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010977"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of protein SERCA1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843114","GARD:20438","Orphanet:209199","UMLS:C5680836"],"termid":"MONDO:0016199","terms_by_termid":{"MONDO:0010977":null},"xrefs":{"Monarch":{"xref_id":"0016199"}}}


id: PATO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being locked together or interconnected to another entity.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interlocked with","termid":"PATO:0002437"}


id: FYPO:0007114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, and morphology of microtubule bundles are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal microtubule bundle","synonyms":[{"name":"normal MT bundle","type":"exact"},{"name":"normal microtubule array","type":"related"},{"name":"normal microtubule bundle physical object quality","type":"exact"}],"termid":"FYPO:0007114"}


id: SO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region enriched in DNA loop anchors and across which DNA loops occur less often than expected by chance.","definition_xrefs":["PMID:32782014","GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"topologically_associated_domain","termid":"SO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_associated_domain_boundary","synonyms":[{"name":"TAD boundary","type":"exact"},{"name":"TAD_boundary","type":"exact"},{"name":"topologically associated domain boundary","type":"exact"}],"termid":"SO:0002305"}


id: PBO:0059012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMEL1 antisense RNA 1","termid":"PBO:0059012"}


id: MONDO:0032918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 84","secondary_identifiers":["OMIM:618792","UMLS:C5394081","DOID:0112219","MEDGEN:1720141","NORD:102487"],"synonyms":[{"name":"DEE84","type":"exact"},{"name":"EIEE84","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 84","type":"exact"},{"name":"Jamuar Syndrome","type":"related"},{"name":"UGDH-Related Disorder","type":"exact"},{"name":"developmental and epileptic encephalopathy 84","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 84","type":"exact"}],"termid":"MONDO:0032918","xrefs":{"Monarch":{"xref_id":"0032918"}}}


id: GO:0019082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a viral protein.","definition_xrefs":["GOC:bf","GOC:jl","ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral gene expression","termid":"GO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral protein processing","termid":"GO:0019082"}


id: PBO:0070005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1301, pseudogene","termid":"PBO:0070005"}


id: MONDO:0056822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotonia congenita","secondary_identifiers":["MEDGEN:8042","OMIM:205000","UMLS:C0002735"],"synonyms":[{"name":"Oppenheim disease","type":"related"},{"name":"amyotonia congenita","type":"exact"}],"termid":"MONDO:0056822","xrefs":{"Monarch":{"xref_id":"0056822"}}}


id: MONDO:0007241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bundle branch block, familial isolated complete right","secondary_identifiers":["SCTID:233919006","MEDGEN:83311","OMIM:113950","UMLS:C0340504","MESH:C562759"],"synonyms":[{"name":"bundle branch block, familial isolated complete right","type":"exact"}],"termid":"MONDO:0007241","xrefs":{"Monarch":{"xref_id":"0007241"}}}


id: GO:0035516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a methylated nucleobase within DNA + 2-oxoglutarate + O2 = a nucleobase within DNA + formaldehyde + succinate + CO2. Catalyzes oxidative demethylation of the DNA base lesions N1- methyladenine, N3-methylcytosine, N1-methylguanine, and N3- methylthymine. Can also act of RNA.","definition_xrefs":["PMID:16482161","RHEA:30299","PMID:12594517","PMID:18775698","PMID:19786499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"DNA demethylase activity","termid":"GO:0035514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"broad specificity oxidative DNA demethylase activity","secondary_identifiers":["GO:0103052","EC:1.14.11.33","GO:0103053","MetaCyc:RXN-12353","Reactome:R-HSA-112118","GO:0103051","Reactome:R-HSA-112123"],"synonyms":[{"name":"1-ethyladenine demethylase activity","type":"narrow"},{"name":"2-oxoglutarate-dependent DNA demethylase","type":"exact"},{"name":"5-formylcytosine dioxygenase activity","type":"narrow"},{"name":"5-hydroxymethylcytosine dioxygenase activity","type":"narrow"},{"name":"5fC dioxygenase","type":"narrow"},{"name":"5hmC dioxygenase","type":"narrow"},{"name":"N1-methyladenine demethylase activity","type":"narrow"},{"name":"N3-methylcytosine demethylase activity","type":"narrow"},{"name":"oxidative DNA demethylase activity","type":"broad"}],"termid":"GO:0035516"}


id: PBO:0087828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIF (Transcription Factor II) middle subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP30","termid":"PBO:0087828"}


id: PATO:0001923
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the side of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised laterally","termid":"PATO:0001923"}


id: PBO:0056844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoglyceride lipase","termid":"PBO:0056844"}


id: MONDO:1012020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"audiogenic seizure, non-human animal","termid":"MONDO:1011830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"audiogenic seizure, rabbit","secondary_identifiers":["OMIA:000093-9986"],"termid":"MONDO:1012020","xrefs":{"Monarch":{"xref_id":"1012020"}}}


id: PBO:0038618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin I converting enzyme 3, pseudogene","termid":"PBO:0038618"}


id: PBO:0065543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreas associated transcription factor 1a","termid":"PBO:0065543"}


id: PBO:0056964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR-23a/27a/24-2 cluster host gene","termid":"PBO:0056964"}


id: PBO:0045666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNAP pseudogene 1","termid":"PBO:0045666"}


id: PBO:0116192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human NEDD4 family-interacting protein ortholog Bsd1","termid":"PBO:0116192"}


id: GO:1904385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an angiotensin stimulus. Angiotensin is any of three physiologically active peptides (angiotensin II, III, or IV) processed from angiotensinogen.","definition_xrefs":["GO_REF:0000071","PMID:22982863","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to angiotensin","termid":"GO:1990776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to angiotensin","termid":"GO:1904385"}


id: PBO:0084550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; active during alcoholic fermentation, regulated by anaerobiosis, inhibited by oxygen, repressed by heme","termid":"PBO:0084550"}


id: PBO:0054810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2223","termid":"PBO:0054810"}


id: GO:0120500
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric E1 complex that activates the ubiquitin-like protein NEDD8. In humans the subunits are NAE1 (also known as APPBP1) and UBA3.","definition_xrefs":["PMID:12740388","PMID:21931660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NAE1-UBA3 complex","synonyms":[{"name":"APPBP1-UBA3 complex","type":"exact"},{"name":"NAE","type":"exact"},{"name":"NEDD8 activating enzyme","type":"exact"}],"termid":"GO:0120500"}


id: PBO:0062157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 6B pseudogene","termid":"PBO:0062157"}


id: MONDO:0005834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the organism Mycobacterium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"},{"relation_name":"is_a","term_name":"granuloma inguinale","termid":"MONDO:0005777"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphogranuloma venereum","secondary_identifiers":["ICD9:099.1","MEDGEN:44221","NCIT:C26822","SCTID:186946009","EFO:0007353","UMLS:C0024286","DOID:13819","MESH:D008219"],"synonyms":[{"name":"Durand-Nicolas-Favre disease","type":"exact"},{"name":"LGV","type":"related"},{"name":"Poradenitis inguinale","type":"exact"},{"name":"climatic or tropical bubo","type":"exact"},{"name":"lymph granuloma inguinale","type":"exact"},{"name":"lymphogranuloma inguinale","type":"exact"},{"name":"strumous bubo","type":"exact"}],"termid":"MONDO:0005834","xrefs":{"Monarch":{"xref_id":"0005834"}}}


id: PBO:0080720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSC domain containing 2","termid":"PBO:0080720"}


id: GO:1990190
data:
  {"annotated_genes":["SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88605],"is_not":false,"summary":null,"term":"GO:1990190"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-glutamate in peptide = CoA + N-acetyl-L-glutamate-peptide.","definition_xrefs":["GOC:al","PMID:23912279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide alpha-N-acetyltransferase activity","termid":"GO:0004596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0034212","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"peptide-glutamate-alpha-N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990190","terms_by_termid":{"GO:1990190":null}}


id: PBO:0081917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 886, pseudogene","termid":"PBO:0081917"}


id: GO:0140161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monocarboxylate(out) + Na+(out) = monocarboxylate(in) + Na+(in).","definition_xrefs":["GOC:ln","PMID:15322102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"monocarboxylate:sodium symporter activity","termid":"GO:0140161"}


id: MONDO:0000168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mental retardation, X-linked, nonsyndromic (obsolete MONDO:0000168)","termid":"MONDO:0000168","xrefs":{"Monarch":{"xref_id":"0000168"}}}


id: MONDO:0005228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anaplastic large cell lymphoma (obsolete MONDO:0005228)","termid":"MONDO:0005228","xrefs":{"Monarch":{"xref_id":"0005228"}}}


id: MONDO:0015052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Primary interstitial lung disease specific to childhood due to pulmonary surfactant protein anomalies is a group of interstitial lung diseases (ILD) induced by genetic mutations disrupting surfactant function and gas exchange in the lung. The disorders caused by these mutations affect full-term infants and older children and exhibit considerable overlap in their clinical and histologic presentation.","definition_xrefs":["Orphanet:100049"],"gene_count":0,"genotype_count":0,"name":"obsolete primary interstitial lung disease specific to childhood due to pulmonary surfactant protein anomalies (obsolete MONDO:0015052)","synonyms":[{"name":"primary ILD specific to childhood due to pulmonary surfactant protein anomalies","type":"exact"}],"termid":"MONDO:0015052","xrefs":{"Monarch":{"xref_id":"0015052"}}}


id: GO:0160032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that generates the active Toll receptor ligand and consists of the cascade of enzymatic reactions initiated by extracellular recognition factors, leading to the cleavage of the inactive form of spatzle family of ligands.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}


id: PBO:0056158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACROD2 antisense RNA 1","termid":"PBO:0056158"}


id: GO:0004706
data:
  {"annotated_genes":["SJAG_04777","SJAG_01718","SJAG_03384","SJAG_03753"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86759,91468,100088,105440],"is_not":false,"summary":null,"term":"GO:0004706"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: JNKK + ATP = JNKK phosphate + ADP. This reaction is the phosphorylation and activation of JUN kinase kinases (JNKKs).","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase kinase kinase activity","termid":"GO:0004709"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01718":null,"SJAG_03384":null,"SJAG_03753":null,"SJAG_04777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004672","GO:0003824","GO:0016301","GO:0016740","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"JUN kinase kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"JNK kinase kinase activity","type":"related"},{"name":"JNKKK","type":"exact"}],"termid":"GO:0004706","terms_by_termid":{"GO:0004706":null}}


id: PBO:0029402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_cell_division_site","termid":"PBO:0029402"}


id: PBO:0075877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3 beta-galactoside alpha-2,3-sialyltransferase 4","termid":"PBO:0075877"}


id: MONDO:0030506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 9","secondary_identifiers":["MEDGEN:1794256","OMIM:619665","UMLS:C5562046"],"synonyms":[{"name":"ODG9","type":"exact"}],"termid":"MONDO:0030506","xrefs":{"Monarch":{"xref_id":"0030506"}}}


id: GO:0051614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of serotonin uptake","termid":"GO:0051612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"inhibition of serotonin uptake","synonyms":[{"name":"inhibition of 5-HT uptake","type":"exact"},{"name":"inhibition of 5-hydroxytryptamine uptake","type":"exact"},{"name":"inhibition of 5HT uptake","type":"exact"},{"name":"inhibition of serotonin import","type":"exact"}],"termid":"GO:0051614"}


id: PBO:0015238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractie ring myosin V regulator Rng8","termid":"PBO:0015238"}


id: PATO:0002211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or inward.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/recurved"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurved","termid":"PATO:0002211"}


id: PR:O94289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lub1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin homeostasis protein lub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.04c","synonyms":[{"name":"Spom972h-lub1","type":"exact"}],"termid":"PR:O94289"}


id: MONDO:1010601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, chicken","secondary_identifiers":["OMIA:000536-9031"],"termid":"MONDO:1010601","xrefs":{"Monarch":{"xref_id":"1010601"}}}


id: PBO:0069019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 263, pseudogene","termid":"PBO:0069019"}


id: PBO:0059262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L28","termid":"PBO:0059262"}


id: PBO:0056996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR34B and MIR34C host gene","termid":"PBO:0056996"}


id: PBO:0113406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; important regulator of substrate invagination from the vacuolar membrane; targeted to vacuole via AP-3 pathway; VTC2 has a paralog, VTC3, that arose from the whole genome duplication","termid":"PBO:0113406"}


id: MONDO:0003427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign lung neoplasm characterized by the presence of a fibrovascular stroma lined by cuboidal to columnar cells. Patients are usually asymptomatic and it is incidentally discovered as a pulmonary nodule during chest X-ray examination. Surgical excision is curative.","definition_xrefs":["NCIT:C3494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"},{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"},{"relation_name":"is_a","term_name":"lung adenoma","termid":"MONDO:0003422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchus adenoma","secondary_identifiers":["MEDGEN:56206","DOID:5391","ICDO:8260/0","UMLS:C0149845"],"synonyms":[{"name":"adenoma of bronchus","type":"exact"},{"name":"adenoma of the bronchus","type":"exact"},{"name":"adenoma, bronchial, benign","type":"exact"},{"name":"bronchial adenoma","type":"exact"},{"name":"bronchial adenoma NOS (morphologic abnormality)","type":"exact"},{"name":"bronchus adenoma","type":"exact"},{"name":"lung papillary adenoma","type":"exact"},{"name":"papillary adenoma of type II pneumocytes","type":"exact"},{"name":"peripheral papillary tumor of type II pneumocytes","type":"exact"},{"name":"peripheral papillary tumour of type II pneumocytes","type":"exact"},{"name":"type II pneumocyte adenoma","type":"exact"}],"termid":"MONDO:0003427","xrefs":{"Monarch":{"xref_id":"0003427"}}}


id: PBO:0062126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 6","termid":"PBO:0062126"}


id: PBO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy","termid":"PBO:0001063"}


id: PBO:0047723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 antisense RNA 1","termid":"PBO:0047723"}


id: RO:HOM0000011
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves genes that diverged after a duplication event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paralogy_relationship_with","synonyms":[{"name":"paralogous to","type":"exact"}],"termid":"RO:HOM0000011"}


id: MONDO:0006430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mantle cell lymphoma occurring in the spleen.","definition_xrefs":["NCIT:C7306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mantle cell lymphoma","termid":"MONDO:0018876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"splenic mantle cell lymphoma","secondary_identifiers":["EFO:1000549","MEDGEN:384473","UMLS:C2018777"],"synonyms":[{"name":"splenic mantle cell lymphoma","type":"exact"}],"termid":"MONDO:0006430","xrefs":{"Monarch":{"xref_id":"0006430"}}}


id: PBO:0062651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 1 pseudogene","termid":"PBO:0062651"}


id: PBO:0004995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmemembrane transporter (predicted)","termid":"PBO:0004995"}


id: PBO:0089239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit","termid":"PBO:0089239"}


id: GO:1903436
data:
  {"annotated_genes":["SJAG_04597","SJAG_01805","SJAG_03048","SJAG_04776","SJAG_02392","SJAG_04666","SJAG_02592","SJAG_00082","SJAG_01188","SJAG_03631","SJAG_01787","SJAG_00256","SJAG_02380","SJAG_04468","SJAG_02838","SJAG_00514","SJAG_03309","SJAG_03704","SJAG_05290","SJAG_00845","SJAG_03936","SJAG_03581","SJAG_03342","SJAG_01114"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[102876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[101555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[89203,93610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[93611,112493,93779,86749,109666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[89977,109908,118456,95052,102881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[112494,105544,117019,114604,92999,89075,88448,104342,106205,91620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[93614,86750,91621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[93005,93576,118658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[100571,87063,110518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[117021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinetic process","termid":"GO:0032954"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:1903436","terms_by_termid":{"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: GO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein (obsolete GO:0005187)","synonyms":[{"name":"storage protein","type":"exact"}],"termid":"GO:0005187"}


id: MONDO:0044633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic pleuroparenchymal fibroelastosis","secondary_identifiers":["GARD:22004","UMLS:C5567467","MEDGEN:1798890","Orphanet:494428"],"synonyms":[{"name":"IPPFE","type":"exact"},{"name":"idiopathic pleuropulmonary fibroelastosis","type":"exact"}],"termid":"MONDO:0044633","xrefs":{"Monarch":{"xref_id":"0044633"}}}


id: PBO:0084096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p; mutations are synthetically lethal with mutations in rom1, which also encodes a GEF; Rom2p localization to the bud surface is dependent on Ack1p; ROM2 has a paralog, ROM1, that arose from the whole genome duplication","termid":"PBO:0084096"}


id: MONDO:0025152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of chimpanzees, gorillas, and orangutans.","definition_xrefs":["MESH:D018420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human primate disease","termid":"MONDO:0025013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-human ape disease","synonyms":[{"name":"Pongidae disease","type":"related"},{"name":"Pongidae diseases","type":"related"},{"name":"ape disease","type":"related"},{"name":"disease, Pongidae","type":"related"},{"name":"disease, ape","type":"related"},{"name":"diseases, Pongidae","type":"related"},{"name":"diseases, ape","type":"related"}],"termid":"MONDO:0025152","xrefs":{"Monarch":{"xref_id":"0025152"}}}


id: PBO:0113268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid binding protein; interacts with mitochondria and with Myo2p, functioning as an adaptor that recruits Myo2p and facilitates actin-based transport of mitochondria to the bud; mediates mitochondria anchorage at the bud tip; phosphorylated protein that localizes to the mitochondrial outer membrane; mRNA is targeted to the bud via the transport system involving She2p; member of the DSL1 family of tethering proteins","termid":"PBO:0113268"}


id: PBO:0045747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBNA1 binding protein 2","termid":"PBO:0045747"}


id: PBO:0072797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 3","termid":"PBO:0072797"}


id: GO:0072059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cortical collecting duct over time, from its formation to the mature structure. The cortical collecting duct is the portion of the collecting duct that resides in the renal cortex.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cortical collecting duct development","termid":"GO:0072059"}


id: FYPO:0007230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell grows in the form of a spindle, i.e. both cell tips are narrower and more pointed than normal.","definition_xrefs":["PMID:22137473","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"spindle-shaped cell","synonyms":[{"name":"spindle-shaped cell during mitotic cell cycle","type":"related"},{"name":"spindle-shaped cell during vegetative growth","type":"exact"},{"name":"spindle-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0007230"}


id: PBO:0073583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 1","termid":"PBO:0073583"}


id: PBO:0061796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase 1","termid":"PBO:0061796"}


id: PBO:0087504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of GPI-GlcNAc transferase involved in synthesis of GlcNAc-PI; N-acetylglucosaminyl phosphatidylinositol (GlcNAc-PI) is the first intermediate in glycosylphosphatidylinositol (GPI) anchor synthesis; shares similarity with mammalian PIG-P","termid":"PBO:0087504"}


id: MONDO:0005339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine alopecia","termid":"MONDO:0021208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgenetic alopecia","secondary_identifiers":["ICD9:704.09","MEDGEN:56404","SCTID:87872006","GARD:9269","DOID:0050801","UMLS:C0162311","EFO:0004191"],"synonyms":[{"name":"alopecia androgenetica, male pattern baldness","type":"exact"},{"name":"androgenetic alopecia","type":"exact"},{"name":"androgenic alopecia","type":"related"},{"name":"male pattern baldness","type":"narrow"}],"termid":"MONDO:0005339","xrefs":{"Monarch":{"xref_id":"0005339"}}}


id: MONDO:1011015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar degeneration that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"cerebellar degeneration, non-human animal","termid":"MONDO:1010243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration, chicken","secondary_identifiers":["OMIA:001221-9031"],"termid":"MONDO:1011015","xrefs":{"Monarch":{"xref_id":"1011015"}}}


id: MONDO:0968990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary central precocious puberty in male","termid":"MONDO:0958356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetic central precocious puberty in male","secondary_identifiers":["Orphanet:650097","UMLS:C5816761","MEDGEN:1853128"],"termid":"MONDO:0968990","xrefs":{"Monarch":{"xref_id":"0968990"}}}


id: PR:Q10083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.04c gene.","definition_xrefs":["UniProtKB:Q10083","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.04c","synonyms":[{"name":"Spom972h-SPAC11D3.04c","type":"exact"}],"termid":"PR:Q10083"}


id: MOD:00386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and a glycine residue to form L-lysine 5-imidazolinone glycine.","definition_xrefs":["PubMed:10504696","RESID:AA0381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1,5-diaminopentyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[(S)-1,5-diaminopentanyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"Anemonia majano fluorescent protein FP486 chromophore","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Lys-Gly)","type":"exact"},{"name":"L-lysine 5-imidazolinone glycine","type":"exact"},{"name":"[2-(1,5-diaminopentanyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"lysyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00386"}


id: GO:0044550
data:
  {"annotated_genes":["SJAG_00988","SJAG_04032","SJAG_01351","SJAG_04516","SJAG_04031","SJAG_00792","SJAG_02599","SJAG_00469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93303,93311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[93257],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[92507,96566,107587,96211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[104557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:0044550","terms_by_termid":{"GO:0019290":null,"GO:0031169":null,"GO:0046938":null,"GO:1905569":null}}


id: PBO:0078177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-2","termid":"PBO:0078177"}


id: PBO:0051608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 32","termid":"PBO:0051608"}


id: PBO:0065798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing like","termid":"PBO:0065798"}


id: GO:0004474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + glyoxylate + H2O = (S)-malate + CoA + H+.","definition_xrefs":["RHEA:18181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"malate synthase activity","secondary_identifiers":["EC:2.3.3.9","MetaCyc:MALSYN-RXN","KEGG_REACTION:R00472"],"synonyms":[{"name":"L-malate glyoxylate-lyase (CoA-acetylating) activity","type":"related"},{"name":"acetyl-CoA:glyoxylate C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"glyoxylate transacetase activity","type":"related"},{"name":"glyoxylate transacetylase activity","type":"related"},{"name":"glyoxylic transacetase activity","type":"related"},{"name":"malate condensing enzyme activity","type":"related"},{"name":"malate synthetase activity","type":"related"},{"name":"malic synthetase activity","type":"related"},{"name":"malic-condensing enzyme activity","type":"related"}],"termid":"GO:0004474"}


id: MONDO:0019269
data:
  {"annotated_genes":["SJAG_02326","SJAG_02085","SJAG_01307","SJAG_02842"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84502,84503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014010"},{"annotations":[85089,85088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100221"}]},"cv_name":"mondo","definition":"Disorders of cornification that are characterized by visible scaling and/or hyperkeratosis of most or all of the skin. Inherited ichthyoses, defined as the generalized form of Mendelian disorders of cornification, affect most or all of the skin. This etiologically and phenotypically heterogenous group of conditions is caused by mutations in various different genes important for keratinocyte differentiation and epidermal barrier function. Acquired forms of ichthyosis can be observed with certain autoimmune, inflammatory, metabolic, endocrine, or infectious diseases or with malignancies.","definition_xrefs":["PMID:22739337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02085":null,"SJAG_02326":null,"SJAG_02842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18985","HP:0008064","DOID:1697","Orphanet:79354","UMLS:C0020757","MedDRA:10021198","MESH:D007057","MEDGEN:7002","NANDO:1200618","NCIT:C84776"],"synonyms":[{"name":"DOC","type":"exact"},{"name":"disorder of cornification","type":"exact"},{"name":"fish scale disease","type":"exact"},{"name":"fish skin disease","type":"exact"},{"name":"ichthyoses","type":"exact"},{"name":"ichthyosis","type":"exact"},{"name":"ichthyosis (disease)","type":"exact"},{"name":"non-syndromic ichthyosis","type":"related"}],"termid":"MONDO:0019269","terms_by_termid":{"MONDO:0014010":null,"MONDO:0100221":null},"xrefs":{"Monarch":{"xref_id":"0019269"}}}


id: PBO:0069037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 282, pseudogene","termid":"PBO:0069037"}


id: _global:negatively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"_global:causally_upstream_of,_negative_effect"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","secondary_identifiers":["RO:0002212"],"termid":"_global:negatively_regulates"}


id: PR:O74748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs8502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs85-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.07c","synonyms":[{"name":"Spom972h-trs8502","type":"exact"},{"name":"TRAPP subunit trs85-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74748"}


id: PBO:0003761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component End3 (predicted)","termid":"PBO:0003761"}


id: MONDO:0030331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ritscher-Schinzel syndrome","termid":"MONDO:0019078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome 4","secondary_identifiers":["OMIM:619435","MEDGEN:1794149","UMLS:C5561939"],"synonyms":[{"name":"RTSC4","type":"exact"},{"name":"Ritscher-Schinzel syndrome 4","type":"exact"}],"termid":"MONDO:0030331","xrefs":{"Monarch":{"xref_id":"0030331"}}}


id: PBO:0057392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548e","termid":"PBO:0057392"}


id: GO:1901401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tetrapyrrole metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of tetrapyrrole metabolic process","synonyms":[{"name":"regulation of tetrapyrrole metabolism","type":"exact"}],"termid":"GO:1901401"}


id: GO:0052103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of induced systemic resistance in the host organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:31516360","GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host induced systemic resistance","termid":"GO:0052159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host induced systemic resistance","secondary_identifiers":["GO:0052533","GO:0052288","GO:0052532"],"synonyms":[{"name":"activation by organism of ISR in host","type":"exact"},{"name":"activation by organism of induced systemic resistance in host","type":"exact"},{"name":"activation by symbiont of induced systemic resistance in host","type":"narrow"},{"name":"induction by organism of ISR in host","type":"exact"},{"name":"induction by organism of induced systemic resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of host induced systemic resistance","type":"exact"},{"name":"induction by symbiont of induced systemic resistance in host","type":"exact"},{"name":"induction of host induced systemic resistance","type":"exact"},{"name":"positive regulation by organism of induced systemic resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host induced systemic resistance","type":"related"},{"name":"positive regulation by symbiont of induced systemic resistance in host","type":"related"},{"name":"stimulation by symbiont of induced systemic resistance in host","type":"narrow"},{"name":"up regulation by symbiont of induced systemic resistance in host","type":"related"},{"name":"up-regulation by symbiont of induced systemic resistance in host","type":"related"},{"name":"upregulation by symbiont of induced systemic resistance in host","type":"related"}],"termid":"GO:0052103"}


id: GO:1903279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium:sodium antiporter activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000059","GOC:mtg_cardiac_conduct_nov11","GOC:rl","PMID:19683723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transporter activity","termid":"GO:1901019"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium:sodium antiporter activity","synonyms":[{"name":"regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"regulation of sodium/calcium exchanger","type":"exact"},{"name":"regulation of sodium:calcium exchange","type":"related"}],"termid":"GO:1903279"}


id: MONDO:0011551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive dopa-responsive dystonia (DYT5b) is a very rare neurometabolic disorder characterized by a spectrum of symptoms ranging from those seen in dopa-responsive dystonia (DRD) to progressive infantile encephalopathy.","definition_xrefs":["Orphanet:101150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dopa-responsive dystonia","termid":"MONDO:0016812"},{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"},{"relation_name":"is_a","term_name":"tyrosine hydroxylase deficiency","termid":"MONDO:0100064"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"TH-deficient dopa-responsive dystonia","secondary_identifiers":["OMIM:605407","GARD:1902","UMLS:C2673535","NORD:1810","SCTID:715827001","MEDGEN:382128"],"synonyms":[{"name":"DOPA responsive dystonia, autosomal recessive","type":"related"},{"name":"DYT5b","type":"exact"},{"name":"Dopa-responsive dystonia, autosomal recessive","type":"exact"},{"name":"Parkinsonism, infantile, autosomal recessive","type":"related"},{"name":"Segawa syndrome, autosomal recessive","type":"related"},{"name":"Segawa syndrome, recessive","type":"exact"},{"name":"Tyrosine Hydroxylase Deficiency","type":"exact"},{"name":"autosomal recessive Segawa syndrome","type":"exact"},{"name":"autosomal recessive dopa-responsive dystonia","type":"exact"},{"name":"dopa-responsive dystonia, autosomal recessive","type":"exact"},{"name":"dystonia, DOPA responsive, autosomal recessive","type":"related"},{"name":"dystonia, Dopa-responsive, autosomal recessive","type":"related"},{"name":"tyrosine hydroxylase-deficient dopa-responsive dystonia","type":"exact"}],"termid":"MONDO:0011551","xrefs":{"Monarch":{"xref_id":"0011551"}}}


id: PBO:0031325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cyclosporin_A","termid":"PBO:0031325"}


id: FYPO:0004637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a DNA-directed DNA polymerase activity are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA-directed DNA polymerase activity","synonyms":[{"name":"normal DNA polymerase activity","type":"broad"}],"termid":"FYPO:0004637"}


id: MONDO:0001496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male genital organ stricture","secondary_identifiers":["SCTID:198064007","DOID:12333","ICD9:608.85","MEDGEN:510240","UMLS:C0156316"],"synonyms":[{"name":"stricture of male genital organs","type":"exact"}],"termid":"MONDO:0001496","xrefs":{"Monarch":{"xref_id":"0001496"}}}


id: PBO:0075738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 19","termid":"PBO:0075738"}


id: MONDO:0020191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow/eyelashes pigmentation anomaly (obsolete MONDO:0020191)","secondary_identifiers":["Orphanet:98601"],"termid":"MONDO:0020191","xrefs":{"Monarch":{"xref_id":"0020191"}}}


id: GO:0070957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a gram-negative bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of gram-negative bacterium","termid":"GO:0070951"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of bacterium","termid":"GO:0070956"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of gram-negative bacterium","termid":"GO:0070945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of gram-negative bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of gram-negative bacterium","type":"narrow"}],"termid":"GO:0070957"}


id: GO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylguanosine 5'-triphospho-5'-polynucleotide + H2O = 7-methylguanosine 5'-phosphate + polynucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete m7G(5')pppN diphosphatase activity (obsolete GO:0050072)","synonyms":[{"name":"M(7)G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:0050072"}


id: GO:0021666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 5. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 5 morphogenesis","termid":"GO:0021664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 formation","termid":"GO:0021666"}


id: PBO:0086630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; mRNA is enriched in Scp160p-associated mRNPs; YIL161W is a non-essential gene","termid":"PBO:0086630"}


id: MONDO:0033939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypohidrosis-electrolyte imbalance-lacrimal gland dysfunction-ichthyosis-xerostomia syndrome (obsolete MONDO:0033939)","termid":"MONDO:0033939","xrefs":{"Monarch":{"xref_id":"0033939"}}}


id: GO:2001027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell chemotaxis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell migration","termid":"GO:0010596"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis","termid":"GO:2001026"},{"relation_name":"negatively_regulates","term_name":"endothelial cell chemotaxis","termid":"GO:0035767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell chemotaxis","termid":"GO:2001027"}


id: GO:1990802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation that is required for DNA double-strand break processing.","definition_xrefs":["GO_REF:0000060","GOC:rb","GOC:TermGenie","PMID:21841787"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in DNA double-strand break processing (obsolete GO:1990802)","synonyms":[{"name":"protein amino acid phosphorylation involved in DNA double-strand break processing","type":"exact"}],"termid":"GO:1990802"}


id: MONDO:0008488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly-radial heart renal anomalies syndrome is characterized by holoprosencephaly, predominantly radial limb deficiency (absent thumbs, phocomelia), heart defects, kidney malformations and absence of gallbladder.","definition_xrefs":["Orphanet:3186"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holoprosencephaly-radial heart renal anomalies syndrome","secondary_identifiers":["MESH:C566655","SCTID:716233007","UMLS:C1866649","OMIM:184705","GARD:2727","MEDGEN:401047"],"synonyms":[{"name":"STEINFELD syndrome","type":"related"},{"name":"Steinfeld syndrome","type":"exact"},{"name":"holoprosencephaly radial heart renal anomalies","type":"related"}],"termid":"MONDO:0008488","xrefs":{"Monarch":{"xref_id":"0008488"}}}


id: MONDO:0014819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Robinow syndrome in which the cause of the disease is a mutation in the DVL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Robinow syndrome","termid":"MONDO:0008389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome 3","secondary_identifiers":["MEDGEN:907878","DOID:0060767","GARD:18549","OMIM:616894","UMLS:C4225164"],"synonyms":[{"name":"DRS3","type":"exact"},{"name":"DVL3 Robinow syndrome","type":"exact"},{"name":"Robinow syndrome caused by mutation in DVL3","type":"exact"},{"name":"Robinow syndrome, autosomal dominant 3","type":"exact"},{"name":"Robinow syndrome, autosomal dominant type 3","type":"exact"},{"name":"autosomal dominant Robinow syndrome type 3","type":"exact"}],"termid":"MONDO:0014819","xrefs":{"Monarch":{"xref_id":"0014819"}}}


id: PBO:0084277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein localized to mitochondria; required for sporulation and maintaining sphingolipid content; similar to SUR7; FMP45 has a paralog, YNL194C, that arose from the whole genome duplication","termid":"PBO:0084277"}


id: PR:Q10435
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase TRIP12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fusion degradation protein C12B10.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.01c","secondary_identifiers":["UniProtKB:Q10435"],"synonyms":[{"name":"Spom972h-TRIP12","type":"exact"}],"termid":"PR:Q10435"}


id: PBO:0056597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDH1 pseudogene 2","termid":"PBO:0056597"}


id: PBO:0050203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 20","termid":"PBO:0050203"}


id: GO:0030006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Regulation of the levels, transport, and metabolism of ions of a heavy metal, a metal that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:mah","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy cellular metal ion homeostasis (obsolete GO:0030006)","synonyms":[{"name":"heavy cellular metal ion homeostasis","type":"exact"}],"termid":"GO:0030006"}


id: PBO:0075768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 1","termid":"PBO:0075768"}


id: MONDO:0005261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pervasive developmental disorder - not otherwise specified (obsolete MONDO:0005261)","termid":"MONDO:0005261","xrefs":{"Monarch":{"xref_id":"0005261"}}}


id: MONDO:0004157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic mucinous cystadenoma (obsolete MONDO:0004157)","termid":"MONDO:0004157","xrefs":{"Monarch":{"xref_id":"0004157"}}}


id: PBO:0073931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 4","termid":"PBO:0073931"}


id: MONDO:0019921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paternal uniparental disomy of chromosome 6 is an uniparental disomy of paternal origin characterized by intrauterine growth retardation, transient neonatal diabetes mellitus, and macroglossia.","definition_xrefs":["Orphanet:96191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 6 disorder","termid":"MONDO:0700013"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome 6","secondary_identifiers":["GARD:19340","UMLS:C4749378","icd11.foundation:1267556610","MEDGEN:1662050"],"synonyms":[{"name":"UPD(6)pat","type":"exact"},{"name":"paternal uniparental disomy of chromosome type 6","type":"exact"}],"termid":"MONDO:0019921","xrefs":{"Monarch":{"xref_id":"0019921"}}}


id: PBO:0006181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-independent_of","termid":"PBO:0006181"}


id: PBO:0027195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_lateral_cell_cortex","termid":"PBO:0027195"}


id: MONDO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival folliculosis","secondary_identifiers":["ICD9:372.02","SCTID:41308008","UMLS:C0155143","DOID:11219","MEDGEN:509806"],"synonyms":[{"name":"acute follicular conjunctivitis","type":"exact"}],"termid":"MONDO:0001228","xrefs":{"Monarch":{"xref_id":"0001228"}}}


id: PBO:0080028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 14, pseudogene","termid":"PBO:0080028"}


id: GO:0070492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oligosaccharide, a molecule with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"oligosaccharide binding","termid":"GO:0070492"}


id: PBO:0040376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d pseudogene 4","termid":"PBO:0040376"}


id: GO:0030380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-17E receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-17E receptor binding","synonyms":[{"name":"IL-17E","type":"narrow"},{"name":"interleukin-17E receptor ligand","type":"narrow"}],"termid":"GO:0030380"}


id: PBO:0028618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U1_snRNP_binding","termid":"PBO:0028618"}


id: PBO:0051296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-27 (pseudogene)","termid":"PBO:0051296"}


id: MONDO:0015931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare urogenital tumor (obsolete MONDO:0015931)","secondary_identifiers":["Orphanet:182114"],"termid":"MONDO:0015931","xrefs":{"Monarch":{"xref_id":"0015931"}}}


id: PBO:0053308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN28B antisense RNA 1","termid":"PBO:0053308"}


id: FYPO:0000593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of transposition is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased transposition","synonyms":[{"name":"decreased transposable element transposition","type":"exact"},{"name":"decreased transposition during mitotic cell cycle","type":"related"},{"name":"decreased transposition during vegetative growth","type":"exact"},{"name":"reduced transposition","type":"exact"},{"name":"transposable element transposition: decreased","type":"related"}],"termid":"FYPO:0000593"}


id: PBO:0044918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 2","termid":"PBO:0044918"}


id: PBO:0054715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2124","termid":"PBO:0054715"}


id: MONDO:0956992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A posterior fossa ependymoma that arises in the posterior fossa with characteristic DNA methylation patterns, including CpG island hypermethylation, global DNA hypomethylation, reduction of nuclear H3 p.K28me3 (K27me3) expression, and EZHIP overexpression.","definition_xrefs":["DOID:0081254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior fossa ependymoma","termid":"MONDO:0850339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"posterior fossa group A ependymoma","termid":"MONDO:0956992","xrefs":{"Monarch":{"xref_id":"0956992"}}}


id: PBO:0058614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6746","termid":"PBO:0058614"}


id: PBO:0082690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the heterotetrameric MHF histone-fold complex; in humans the MHF complex interacts with both DNA and Mph1p ortholog FANCM, a Fanconi anemia complementation group protein, to stabilize and remodel blocked replication forks and repair damaged DNA; mhf1 srs2 double mutants are MMS hypersensitive; ortholog of human centromere constitutive-associated network (CCAN) subunit CENP-S, also known as MHF1","termid":"PBO:0082690"}


id: PBO:0066796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 95","termid":"PBO:0066796"}


id: PBO:0062097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 47","termid":"PBO:0062097"}


id: PATO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A position quality inhering in a bearer by virtue of the bearer's existing near the end of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subterminal","termid":"PATO:0002475"}


id: PBO:0082500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of Dcp1p-Dcp2p decapping enzyme complex; removes 5' cap structure from mRNAs prior to their degradation; also enters nucleus and positively regulates transcription initiation; nudix hydrolase family member; forms cytoplasmic foci upon DNA replication stress; human homolog DCP2 complements yeast dcp2 thermosensitive mutant","termid":"PBO:0082500"}


id: MONDO:0100344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome","termid":"MONDO:0015231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter disease type 1","secondary_identifiers":["MEDGEN:355727","Orphanet:620217","DOID:0110142","GARD:22482","MESH:C537652","OMIM:601678","SCTID:700107006","UMLS:C1866495"],"synonyms":[{"name":"BARTS1","type":"exact"},{"name":"Bartter disease type 1","type":"exact"},{"name":"Bartter syndrome antenatal type 1","type":"related"},{"name":"Bartter syndrome caused by mutation in SLC12A1","type":"exact"},{"name":"Bartter syndrome type 1","type":"exact"},{"name":"Bartter syndrome type 1 antenatal","type":"exact"},{"name":"Bartter syndrome, antenatal, type 1","type":"related"},{"name":"Bartter syndrome, furosemide type","type":"broad"},{"name":"Bartter syndrome, furosemide-amiloride type","type":"broad"},{"name":"Bartter syndrome, type 1","type":"exact"},{"name":"Bartter syndrome, type 1, antenatal","type":"related"},{"name":"SLC12A1 Bartter syndrome","type":"exact"},{"name":"antenatal Bartter syndrome","type":"related"},{"name":"antenatal Bartter syndrome type 1","type":"related"},{"name":"hyperprostaglandin E syndrome","type":"broad"},{"name":"hyperprostaglandin E syndrome 1","type":"exact"},{"name":"hypokalemic alkalosis with hypercalciuria 1 antenatal","type":"exact"},{"name":"hypokalemic alkalosis with hypercalciuria 1, antenatal","type":"related"},{"name":"hypokalemic alkalosis with hypercalciuria antenatal 1","type":"related"},{"name":"hypokalemic alkalosis with hypercalciuria, antenatal, 1","type":"related"}],"termid":"MONDO:0100344","xrefs":{"Monarch":{"xref_id":"0100344"}}}


id: GO:1990732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane-bounded organelle found within the chloroplasts of algae and hornworts; responsible for carbon dioxide fixation.","definition_xrefs":["GOC:cjm","Wikipedia:Pyrenoid","GOC:pr","PMID:23345319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pyrenoid","termid":"GO:1990732"}


id: PBO:0043049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 2, pseudogene","termid":"PBO:0043049"}


id: GO:0036077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ossification wherein bone tissue forms within tendonous tissue.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intratendonous ossification","termid":"GO:0036077"}


id: PR:O94387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl8 gene.","definition_xrefs":["UniProtKB:O94387","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C29A10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.10c","synonyms":[{"name":"Spom972h-dbl8","type":"exact"}],"termid":"PR:O94387"}


id: PBO:0078376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells 2","termid":"PBO:0078376"}


id: PATO:0001757
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in a bearer by virtue of the bearer's ability to convey electricity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Electrical_conduction"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conductivity","termid":"PATO:0001585"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electrical conductivity","termid":"PATO:0001757"}


id: PBO:0069919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1211, pseudogene","termid":"PBO:0069919"}


id: PBO:0081724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 652 pseudogene 1","termid":"PBO:0081724"}


id: GO:0010732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein glutathionylation. Protein glutathionylation is the protein modification process in which a glutathione molecule is added to a protein amino acid through a disulfide linkage.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:rl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein glutathionylation","termid":"GO:0010731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein glutathionylation","synonyms":[{"name":"regulation of protein amino acid glutathionylation","type":"exact"}],"termid":"GO:0010732"}


id: PBO:0070102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 16 pseudogene","termid":"PBO:0070102"}


id: PBO:0071573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 2","termid":"PBO:0071573"}


id: MONDO:0100028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsies that have a distinct immune-mediated etiology with evidence of central nervous system inflammation, that has been demonstrated to be associated with a substantially increased risk of developing epilepsy.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"immune epilepsy","secondary_identifiers":["MEDGEN:1371634","UMLS:C4510729"],"termid":"MONDO:0100028","xrefs":{"Monarch":{"xref_id":"0100028"}}}


id: GO:2000552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell cytokine production","termid":"GO:0002725"},{"relation_name":"is_a","term_name":"negative regulation of type 2 immune response","termid":"GO:0002829"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell cytokine production","termid":"GO:2000551"},{"relation_name":"negatively_regulates","term_name":"T-helper 2 cell cytokine production","termid":"GO:0035745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of T-helper 2 cell cytokine production","synonyms":[{"name":"negative regulation of Th2 cell cytokine production","type":"exact"}],"termid":"GO:2000552"}


id: MONDO:0011248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 13q is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the long arm of chromosome 13, with a highly variable phenotype typically characterized by varying degrees of intellectual disability and developmental delay, as well as CNS malformations (e.g. holoprosencephaly, anencephaly, ventriculomegaly, Dandy-Walker malformation), ocular abnormalities (e.g. hypertelorism, microphthalmia, strabismus, aniridia, retinal dysplasia) and craniofacial dysmorphism (microcephaly, trigonocephaly, large and malformed ears, broad prominent nasal bridge, micrognathia). Cardiac, genitourinary, gastrointestinal and skeletal manifestations have also been reported.","definition_xrefs":["Orphanet:1590"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 13","termid":"MONDO:0016911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 13q","secondary_identifiers":["SCTID:763527007","GARD:16571","MESH:C566526","OMIM:602553","MEDGEN:355405","UMLS:C1865208"],"synonyms":[{"name":"13q32 deletion","type":"exact"},{"name":"anal atresia, hypospadias, and penoscrotal inversion","type":"related"},{"name":"deletion 13q32","type":"exact"},{"name":"distal 13q deletion","type":"exact"},{"name":"distal monosomy type 13q","type":"exact"},{"name":"monosomy 13q32","type":"exact"},{"name":"telomeric deletion13q","type":"exact"}],"termid":"MONDO:0011248","xrefs":{"Monarch":{"xref_id":"0011248"}}}


id: PBO:0039784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 11","termid":"PBO:0039784"}


id: PBO:0034707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1","termid":"PBO:0034707"}


id: PBO:0049854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECTD2 antisense RNA 1","termid":"PBO:0049854"}


id: GO:1904658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sensory perception of sweet taste.","definition_xrefs":["GO_REF:0000058","PMID:1716172","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"regulation of sensory perception of sweet taste","termid":"GO:1904656"},{"relation_name":"positively_regulates","term_name":"sensory perception of sweet taste","termid":"GO:0050916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sensory perception of sweet taste","synonyms":[{"name":"activation of sensory perception of sweet taste","type":"narrow"},{"name":"activation of sweet taste perception","type":"narrow"},{"name":"positive regulation of sweet taste perception","type":"exact"},{"name":"up regulation of sensory perception of sweet taste","type":"exact"},{"name":"up regulation of sweet taste perception","type":"exact"},{"name":"up-regulation of sensory perception of sweet taste","type":"exact"},{"name":"up-regulation of sweet taste perception","type":"exact"},{"name":"upregulation of sensory perception of sweet taste","type":"exact"},{"name":"upregulation of sweet taste perception","type":"exact"}],"termid":"GO:1904658"}


id: GO:0097140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BIM and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BIM-BCL-xl complex","termid":"GO:0097140"}


id: GO:0052522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of phagocytosis in other organism involved in symbiotic interaction (obsolete GO:0052522)","synonyms":[{"name":"activation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"stimulation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"up-regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"upregulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052522"}


id: MONDO:0700106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immune system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune system disorder, non-human animal","termid":"MONDO:0700106","xrefs":{"Monarch":{"xref_id":"0700106"}}}


id: GO:0016896
data:
  {"annotated_genes":["SJAG_00841","SJAG_02993","SJAG_03876","SJAG_03745","SJAG_01836","SJAG_04006","SJAG_02540","SJAG_03132","SJAG_01822","SJAG_04369","SJAG_04407","SJAG_00401","SJAG_00081","SJAG_06586","SJAG_04084","SJAG_04153","SJAG_02275","SJAG_00966","SJAG_04824","SJAG_04818","SJAG_01798","SJAG_03276","SJAG_04587","SJAG_04519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98139,103586,104431,110395,91457,94822,102851,114463,114793,106941,117433,107644,89185,106624,102121,115739,101271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[89833,89521,94158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[113566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[114798,106942,112057,92606,115740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[92924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity","termid":"GO:0004532"},{"relation_name":"is_a","term_name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","termid":"GO:0016796"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02540":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016787","GO:0004527","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"RNA exonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.13.-","Reactome:R-HSA-429860"],"synonyms":[{"name":"exoribonuclease activity, producing 5' phosphomonoesters","type":"exact"},{"name":"exoribonuclease activity, producing 5'-phosphomonoesters","type":"exact"}],"termid":"GO:0016896","terms_by_termid":{"GO:0000175":null,"GO:0004534":null,"GO:0004535":null,"GO:0008859":null,"GO:1990838":null}}


id: MONDO:0010095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia-tapetoretinal degeneration syndrome","secondary_identifiers":["GARD:16559","MESH:C564788","MEDGEN:336461","Orphanet:1178","UMLS:C1848932","OMIM:272600"],"synonyms":[{"name":"tapetoretinal degeneration with ataxia","type":"related"}],"termid":"MONDO:0010095","xrefs":{"Monarch":{"xref_id":"0010095"}}}


id: FYPO:0007971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic anaphase B in which interpolar microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a higher rate, or speed, than normal.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtuble polymerization during vegetative growth","termid":"FYPO:0007970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of interpolar microtubule polymerization during mitotic anaphase B","termid":"FYPO:0007971"}


id: MONDO:0015054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary angioedema type 2 (HAE 2) is a form of hereditary angioedema characterized by acute edema in subcutaneous tissues, viscera and/or the upper airway.","definition_xrefs":["Orphanet:100051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema with C1Inh deficiency","termid":"MONDO:0033946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema type 2","secondary_identifiers":["GARD:16934","UMLS:C0398776","MEDGEN:585077"],"synonyms":[{"name":"HAE 2","type":"exact"},{"name":"HAE-II","type":"exact"},{"name":"hereditary angioneurotic edema type 2","type":"exact"},{"name":"hereditary angioneurotic oedema type 2","type":"exact"}],"termid":"MONDO:0015054","xrefs":{"Monarch":{"xref_id":"0015054"}}}


id: MONDO:0022471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aortic valve stenosis","termid":"MONDO:0042981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"childhood aortic valve stenosis","secondary_identifiers":["GARD:744"],"synonyms":[{"name":"aortic valves stenosis of the child","type":"related"}],"termid":"MONDO:0022471","xrefs":{"Monarch":{"xref_id":"0022471"}}}


id: GO:0150118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell-substrate junction organization.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"negatively_regulates","term_name":"cell-substrate junction organization","termid":"GO:0150115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell-substrate junction organization","termid":"GO:0150118"}


id: MONDO:0020207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare isolated myopia is a rare, genetic, refraction anomaly disorder characterized by non-syndromic severe myopia, which may be associated with cataract and vitreoretinal degeneration (retinal detachment) that may lead to blindness.","definition_xrefs":["Orphanet:98619"],"gene_count":0,"genotype_count":0,"name":"obsolete rare isolated myopia (obsolete MONDO:0020207)","termid":"MONDO:0020207","xrefs":{"Monarch":{"xref_id":"0020207"}}}


id: MONDO:0004510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of well differentiated liposarcoma occurring most often in the retroperitoneum. It is characterized by the presence of a predominant inflammatory infiltrate composed of lymphoplasmacytic aggregates.","definition_xrefs":["NCIT:C6508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"well-differentiated liposarcoma","termid":"MONDO:0005103"},{"relation_name":"is_a","term_name":"atypical lipomatous tumor","termid":"MONDO:0006097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"inflammatory liposarcoma","secondary_identifiers":["UMLS:C1370890","MEDGEN:234588","DOID:8233"],"synonyms":[{"name":"inflammatory liposarcoma","type":"exact"}],"termid":"MONDO:0004510","xrefs":{"Monarch":{"xref_id":"0004510"}}}


id: PBO:0050627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 2","termid":"PBO:0050627"}


id: PBO:0084404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysine-specific metalloprotease of the pitrilysin family; metalloprotease of the intermembrane space; degrades proteins and presequence peptides cleaved from imported proteins; required for normal mitochondrial morphology; mutation in human homolog PITRM1 is implicated in autosomal recessive spinocerebellar ataxias (ARCA)","termid":"PBO:0084404"}


id: MONDO:0025351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies-neurodevelopmental syndrome, X-linked","secondary_identifiers":["OMIM:301056","UMLS:C5542341","MEDGEN:1788942"],"synonyms":[{"name":"Linked syndrome","type":"exact"},{"name":"MCAND","type":"exact"},{"name":"multiple congenital anomalies-neurodevelopmental syndrome, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0025351","xrefs":{"Monarch":{"xref_id":"0025351"}}}


id: GO:0050538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-L-2-amino acid + H2O = L-2-amino acid + NH3 + CO2. The N-carbamoyl-L-2-amino acid is a 2-ureido carboxylate.","definition_xrefs":["EC:3.5.1.87","MetaCyc:3.5.1.87-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"N-carbamoyl-L-amino-acid hydrolase activity","secondary_identifiers":["RHEA:17581"],"synonyms":[{"name":"L-carbamoylase activity","type":"related"},{"name":"N-carbamoyl-L-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0050538"}


id: GO:0008695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phenylpropionate + NADH + H+ + O2 = NAD+ + cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol.","definition_xrefs":["UM-BBD_enzymeID:e0307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-phenylpropionate dioxygenase activity","secondary_identifiers":["EC:1.14.12.19","RHEA:20357","MetaCyc:HCAMULTI-RXN"],"synonyms":[{"name":"3-phenylpropanoate dioxygenase activity","type":"related"},{"name":"3-phenylpropanoate,NADH:oxygen oxidoreductase (2,3-hydroxylating) activity","type":"related"},{"name":"Hca dioxygenase activity","type":"related"},{"name":"HcaA1A2CD","type":"related"}],"termid":"GO:0008695"}


id: GO:0036008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, which proceeds by phosphorylation of sucrose to form sucrose-6-phosphate. The subsequent actions of a hydrolase and a fructokinase generate fructose-6-phosphate and glucose-6-phosphate.","definition_xrefs":["GOC:bf","MetaCyc:SUCUTIL-PWY","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"},{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"glucose 6-phosphate metabolic process","termid":"GO:0051156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate and glucose-6-phosphate","termid":"GO:0036008"}


id: GO:0018532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N5,N10-methenyltetrahydromethanopterin + H2 = N5,N10-methylenetetrahydromethanopterin.","definition_xrefs":["UM-BBD_reactionID:r0353"],"gene_count":0,"genotype_count":0,"name":"obsolete 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity (obsolete GO:0018532)","synonyms":[{"name":"F420-independent 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity","type":"exact"},{"name":"F420-independent methylene-H4MPT dehydrogenase activity","type":"exact"},{"name":"coenzyme F420-independent 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity","type":"exact"},{"name":"coenzyme F420-independent methylene-H4MPT dehydrogenase activity","type":"exact"}],"termid":"GO:0018532"}


id: PBO:0077332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 69","termid":"PBO:0077332"}


id: GO:0045772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases autophagosome size.","definition_xrefs":["GOC:autophagy","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagosome size","termid":"GO:0016243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of autophagosome size","synonyms":[{"name":"activation of autophagic vacuole size","type":"narrow"},{"name":"positive regulation of autophagic vacuole size","type":"exact"},{"name":"stimulation of autophagic vacuole size","type":"narrow"},{"name":"up regulation of autophagic vacuole size","type":"exact"},{"name":"up-regulation of autophagic vacuole size","type":"exact"},{"name":"upregulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0045772"}


id: PBO:0081141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP41 zinc finger protein","termid":"PBO:0081141"}


id: GO:0035634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of exposure to a stilbenoid. Stilbenoids are secondary products of heartwood formation in trees that can act as phytoalexins. Stilbenoids are hydroxylated derivatives of stilbene. They belong to the family of phenylpropanoids and share most of their biosynthesis pathway with chalcones.","definition_xrefs":["GOC:yaf","Wikipedia:Stilbenoid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stilbenoid","termid":"GO:0035634"}


id: PBO:0074235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 48 member 1","termid":"PBO:0074235"}


id: GO:0047795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cyclohexane-1,2-diol + NAD+ = 2-hydroxycyclohexan-1-one + NADH.","definition_xrefs":["MetaCyc:CYCLOHEXANE-12-DIOL-DEHYDROGENASE-RXN","EC:1.1.1.174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cyclohexane-1,2-diol dehydrogenase activity","secondary_identifiers":["RHEA:18141"],"synonyms":[{"name":"trans-cyclohexane-1,2-diol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047795"}


id: PBO:0047024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A27, pseudogene","termid":"PBO:0047024"}


id: PBO:0031613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_transport","termid":"PBO:0031613"}


id: MONDO:0018025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chronic actinic dermatitis","secondary_identifiers":["Orphanet:330064","ICD9:692.73","icd11.foundation:248339081","MEDGEN:76406","SCTID:52636001","GARD:21506","UMLS:C0282309"],"synonyms":[{"name":"actinic reticuloid","type":"exact"},{"name":"chronic photosensitivity dermatitis","type":"exact"}],"termid":"MONDO:0018025","xrefs":{"Monarch":{"xref_id":"0018025"}}}


id: PR:Q10297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An importin-9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10997:SF9","OMA:SCHPO00987","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit beta-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.03c","secondary_identifiers":["UniProtKB:Q10297"],"synonyms":[{"name":"114 kDa karyopherin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IPO9","type":"exact"},{"name":"karyopherin subunit beta-5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin-114 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10297"}


id: PBO:0058901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12119","termid":"PBO:0058901"}


id: MONDO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hordeolum that results from infection of a meibomian gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"hordeolum","termid":"MONDO:0005800"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"},{"relation_name":"is_a","term_name":"skin appendage disorder","termid":"MONDO:0024481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"internal hordeolum","secondary_identifiers":["DOID:9908","SCTID:414521009","UMLS:C0085690","ICD9:373.12","MEDGEN:43227"],"synonyms":[{"name":"hordeolum internum","type":"related"},{"name":"hordeolum of tarsal gland","type":"exact"},{"name":"infected chalazion","type":"related"},{"name":"infected cyst of meibomian gland","type":"related"},{"name":"infected meibomian cyst","type":"related"},{"name":"infection of meibomian gland","type":"related"},{"name":"internal hordeolum","type":"exact"},{"name":"meibomian adenitis","type":"related"},{"name":"tarsal gland hordeolum","type":"exact"}],"termid":"MONDO:0004917","xrefs":{"Monarch":{"xref_id":"0004917"}}}


id: PBO:0064838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R12A antisense RNA 1","termid":"PBO:0064838"}


id: PBO:0067906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 208","termid":"PBO:0067906"}


id: GO:0021905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the creation of the forebrain-midbrain boundary.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph","GOC:dgh","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain-midbrain boundary formation","termid":"GO:0021905"}


id: GO:0052366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of xylan in other organism involved in symbiotic interaction (obsolete GO:0052366)","synonyms":[{"name":"catabolism by organism of xylan in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052366"}


id: GO:0075513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any caveolin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins when material is taken up into plasma membrane caveolae - specialized lipid rafts that form 50-70 nm flask-shaped invaginations of the plasma membrane - which then pinch off to form endocytic caveolar carriers containing the virus.","definition_xrefs":["VZ:976","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis of virus by host cell","termid":"GO:0019065"},{"relation_name":"is_a","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"caveolin-mediated endocytosis of virus by host cell","synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis","type":"exact"},{"name":"viral entry into host cell via caveolin-mediated endocytosis","type":"related"},{"name":"viral penetration via caveolae-mediated endocytosis followed by endosome disruption","type":"exact"}],"termid":"GO:0075513"}


id: PR:Q9P3W2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1803 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3W2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVP1-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.06","synonyms":[{"name":"Spom972h-atg1803","type":"exact"}],"termid":"PR:Q9P3W2"}


id: GO:0097676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 36 of the histone.","definition_xrefs":["PMID:21187428","GOC:lb"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 dimethylation (obsolete GO:0097676)","termid":"GO:0097676"}


id: PBO:0061504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRSN2 antisense RNA 1","termid":"PBO:0061504"}


id: GO:0004320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (9Z)-octadecenoyl-[ACP] + H2O = (9Z)-octadecenoate + H+ + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oleoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0004320)","synonyms":[{"name":"oleoyl-ACP hydrolase activity","type":"exact"},{"name":"oleoyl-ACP thioesterase activity","type":"related"},{"name":"oleoyl-[acyl-carrier protein] hydrolase activity","type":"exact"},{"name":"oleoyl-acyl carrier protein thioesterase activity","type":"related"},{"name":"oleoyl-acyl-carrier-protein hydrolase","type":"broad"}],"termid":"GO:0004320"}


id: GO:0052149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in host peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host peptidase activity (obsolete GO:0052149)","synonyms":[{"name":"modulation by symbiont of host protease activity","type":"narrow"}],"termid":"GO:0052149"}


id: PBO:0060699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA4 mitochondrial complex associated","termid":"PBO:0060699"}


id: GO:2000641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early endosome to late endosome transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"early endosome to late endosome transport","termid":"GO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of early endosome to late endosome transport","termid":"GO:2000641"}


id: GO:0006608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a small nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNP protein import into nucleus (obsolete GO:0006608)","synonyms":[{"name":"snRNP protein import into cell nucleus","type":"exact"},{"name":"snRNP protein transport from cytoplasm to nucleus","type":"exact"},{"name":"snRNP protein-nucleus import","type":"exact"}],"termid":"GO:0006608"}


id: GO:0099174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form of a presynapse.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"presynapse organization","termid":"GO:0099172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of presynapse organization","synonyms":[{"name":"regulation of presynapse organisation","type":"exact"},{"name":"regulation of presynapse organization and biogenesis","type":"related"},{"name":"regulation of presynapse structure","type":"exact"}],"termid":"GO:0099174"}


id: GO:0051538
data:
  {"annotated_genes":["SJAG_04054","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88029,100717],"is_not":false,"summary":null,"term":"GO:0051538"}]},"cv_name":"molecular_function","definition":"Binding to a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing.","definition_xrefs":["GOC:ai","PMID:15952888","Wikipedia:Iron-sulfur_cluster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"3 iron, 4 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3 Fe 4 S cluster binding","type":"exact"},{"name":"3 iron, 4 sulphur cluster binding","type":"exact"},{"name":"3Fe-4S cluster binding","type":"exact"},{"name":"iron-sulfur cluster 3Fe-4S binding","type":"exact"},{"name":"iron-sulphur cluster 3Fe-4S binding","type":"exact"},{"name":"triiron tetrasulfide cluster binding","type":"exact"},{"name":"triiron tetrasulphide cluster binding","type":"exact"}],"termid":"GO:0051538","terms_by_termid":{"GO:0051538":null}}


id: PBO:0043327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3 pseudogene 1","termid":"PBO:0043327"}


id: MOD:00419
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to (R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid.","definition_xrefs":["PubMed:12643538","Unimod:26#C","DeltaMass:336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"(R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid","synonyms":[{"name":"(R)-5-oxoperhydro-1,4-thiazine-3-carboxylic acid","type":"exact"},{"name":"5-oxothiomorpholine-3-carboxylic acid","type":"exact"},{"name":"Otc","type":"exact"},{"name":"Pyro-carbamidomethyl","type":"related"},{"name":"S-carbamoylmethylcysteine cyclization (N-terminus)","type":"exact"}],"termid":"MOD:00419"}


id: PBO:0068897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 139, pseudogene","termid":"PBO:0068897"}


id: GO:0075296
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101473],"is_not":false,"summary":null,"term":"GO:0075296"},{"annotations":[89937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"positively_regulates","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0008150","GO:0030437","GO:0007049"],"is_obsolete":false,"name":"positive regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075296","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: PBO:0087032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L15B; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L15, no bacterial homolog; RPL15B has a paralog, RPL15A, that arose from the whole genome duplication; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0087032"}


id: GO:0035364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GO:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"thymine transport","synonyms":[{"name":"5-methyluracil transport","type":"exact"},{"name":"thymine transmembrane transport","type":"exact"}],"termid":"GO:0035364"}


id: MOD:01861
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a cysteine thiol with the amido nitrogen of the following residue to form an isothiazolidinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"}


id: PBO:0083381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps CCT8/YJL008C, a verified gene encoding a subunit of the cytosolic chaperonin Cct ring complex","termid":"PBO:0083381"}


id: GO:0140677
data:
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:false,"rel_names":["is_a"],"summary":null,"term":"GO:1990757"},{"annotations":[97773,116287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097027"}]},"cv_name":"molecular_function","definition":"A molecular function regulator that activates or increases the activity of its target via non-covalent binding that does not result in covalent modification to the target.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator 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id: PBO:0061310
data:
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id: GO:0071125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to epidermal growth factor receptor.","definition_xrefs":["PMID:15834425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-EGFR complex","synonyms":[{"name":"ITGAV-ITGB3-EGFR complex","type":"narrow"}],"termid":"GO:0071125"}


id: FYPO:0002117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a specified transporter activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0002114"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0002114","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished transporter activity","synonyms":[{"name":"transporter activity abolished","type":"exact"}],"termid":"FYPO:0002117"}


id: MOD:00513
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex(2) HexNAc","definition_xrefs":["RESID:AA0151#var","PubMed:111247","PubMed:5490222","Unimod:145","PubMed:1694179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc1dHex2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(1)dHex(2)","type":"related"},{"name":"HexNAc1dHex2","type":"related"}],"termid":"MOD:00513"}


id: MONDO:0021698
data:
  {"annotated_genes":["SJAG_03786","SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007079"},{"annotations":[84414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012454"}]},"cv_name":"mondo","definition":"Disorders related to or resulting from abuse or mis-use of alcohol.","definition_xrefs":["MESH:D019973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance-related disorder","termid":"MONDO:0002494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_03786":null},"genotype_count":0,"is_obsolete":false,"name":"alcohol-related disorders","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:29212009","UMLS:C0236664","MEDGEN:68632"],"synonyms":[{"name":"alcohol related disorders","type":"related"},{"name":"alcohol-related disorder","type":"related"},{"name":"disorder, alcohol-related","type":"related"},{"name":"disorders, alcohol-related","type":"related"}],"termid":"MONDO:0021698","terms_by_termid":{"MONDO:0007079":null,"MONDO:0012454":null},"xrefs":{"Monarch":{"xref_id":"0021698"}}}


id: GO:0009115
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116489],"is_not":false,"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"xanthine metabolic process","termid":"GO:0046110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xanthine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006151"],"synonyms":[{"name":"xanthine breakdown","type":"exact"},{"name":"xanthine catabolism","type":"exact"},{"name":"xanthine degradation","type":"exact"},{"name":"xanthine oxidation","type":"narrow"}],"termid":"GO:0009115","terms_by_termid":{"GO:0009115":null}}


id: PBO:0042244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 6","termid":"PBO:0042244"}


id: PBO:0075842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 3","termid":"PBO:0075842"}


id: PBO:0027669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubules_present_in_increased_numbers","termid":"PBO:0027669"}


id: PBO:0084517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm ZK616.6/EMC-4 and fly CG11137; mutation is functionally complemented by human EMC4","termid":"PBO:0084517"}


id: GO:0051432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH1 protein domain, present in Bcl-2 family members. Proteins that act as inhibitors of apoptosis harbour at least three BH domains: BH1, BH2 and BH3; the BH1 and BH2 domains are found in all death antagonists of the Bcl-2 family but only in one class of death agonists.","definition_xrefs":["PMID:9704409","Prosite:PS01080","PMID:12133724","PMID:9020082","PMID:11048732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BH1 domain binding","termid":"GO:0051432"}


id: PR:Q09831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk14 gene.","definition_xrefs":["UniProtKB:Q09831","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.05","synonyms":[{"name":"Spom972h-ppk14","type":"exact"}],"termid":"PR:Q09831"}


id: PBO:0003432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type I","termid":"PBO:0003432"}


id: MONDO:0006771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the tongue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glossitis","secondary_identifiers":["MedDRA:10018386","ICD9:529.0","MESH:D005928","icd11.foundation:843084384","ICD10CM:K14.0","UMLS:C0017675","DOID:1456","EFO:1000951","MEDGEN:6618","SCTID:45534005"],"synonyms":[{"name":"inflammation of tongue","type":"exact"},{"name":"tongue inflammation","type":"exact"}],"termid":"MONDO:0006771","xrefs":{"Monarch":{"xref_id":"0006771"}}}


id: GO:0015347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of organic anions from one side of a membrane to the other, in a sodium independent manner.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium-independent organic anion transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9661799","Reactome:R-HSA-9757010","Reactome:R-HSA-879562","Reactome:R-HSA-9661397","Reactome:R-HSA-9661723","Reactome:R-HSA-879594","Reactome:R-HSA-9749583","Reactome:R-HSA-9749607","Reactome:R-HSA-561059","Reactome:R-HSA-879584","Reactome:R-HSA-9661446"],"termid":"GO:0015347"}


id: GO:0048774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a cyanophore cell. Cyanophores are pigment cells derived from the neural crest. They contain a blue pigment of unknown chemical composition. The pigment is stored in fibrous organelles termed cyanosomes.","definition_xrefs":["GOC:jid","GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanophore differentiation","synonyms":[{"name":"cyanophore cell differentiation","type":"exact"}],"termid":"GO:0048774"}


id: GO:0008076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel complex","termid":"GO:0034705"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"voltage-gated potassium channel complex","secondary_identifiers":["NIF_Subcellular:sao371494298"],"synonyms":[{"name":"voltage gated potassium channel complex","type":"exact"},{"name":"voltage-dependent potassium channel complex","type":"exact"},{"name":"voltage-sensitive potassium channel complex","type":"exact"}],"termid":"GO:0008076"}


id: PBO:0017830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A dioxygenase Ofd2","termid":"PBO:0017830"}


id: PBO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap155","termid":"PBO:0002474"}


id: PBO:0016971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity implicated in DNA repair (predicted)","termid":"PBO:0016971"}


id: PBO:0077147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase","termid":"PBO:0077147"}


id: PATO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An accumulation which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"accumulation","termid":"PATO:0002269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased accumulation","termid":"PATO:0002271"}


id: SO:1000101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":".","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000101 mutation_causing_polypeptide_C_terminal_elongation (obsolete SO:1000101)","synonyms":[{"name":"mutation causing polypeptide C terminal elongation","type":"exact"},{"name":"polypeptide C-terminal elongation","type":"exact"}],"termid":"SO:1000101"}


id: PBO:0042493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH13 antisense RNA 1","termid":"PBO:0042493"}


id: GO:0004136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + ATP = ADP + dAMP + 2 H+.","definition_xrefs":["RHEA:23452","EC:2.7.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside kinase activity","termid":"GO:0019136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"deoxyadenosine kinase activity","secondary_identifiers":["KEGG_REACTION:R02089","MetaCyc:DEOXYADENOSINE-KINASE-RXN"],"synonyms":[{"name":"ATP:deoxyadenosine 5'-phosphotransferase activity","type":"related"},{"name":"deoxyadenosine kinase (phosphorylating)","type":"related"},{"name":"purine-deoxyribonucleoside kinase activity","type":"related"}],"termid":"GO:0004136"}


id: PBO:0088871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE associated Golgi protein","termid":"PBO:0088871"}


id: PR:Q9Y7M1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2-hydroxyacyl-CoA lyase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02766","PRO:DNx","PANTHER:PTHR18968:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.04","secondary_identifiers":["UniProtKB:Q9Y7M1"],"synonyms":[{"name":"Spom972h-HACL1","type":"exact"}],"termid":"PR:Q9Y7M1"}


id: MONDO:0008376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal venous beading","secondary_identifiers":["UMLS:C2939143","MEDGEN:422473","OMIM:180080"],"synonyms":[{"name":"retinal venous beading","type":"exact"}],"termid":"MONDO:0008376","xrefs":{"Monarch":{"xref_id":"0008376"}}}


id: PBO:0073879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 6","termid":"PBO:0073879"}


id: PBO:0031362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_K-252a","termid":"PBO:0031362"}


id: FYPO:0007757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the new mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to new mitotic spindle pole body","termid":"FYPO:0003330"},{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body during anaphase","termid":"FYPO:0007568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to new mitotic spindle pole body during anaphase","synonyms":[{"name":"normal asymmetric protein localization to new mitotic spindle pole body during anaphase","type":"exact"},{"name":"normal protein localisation to new mitotic spindle pole body during anaphase","type":"exact"},{"name":"normal protein localization to new mitotic SPB during anaphase","type":"exact"},{"name":"normal protein localization to new mitotic spindle pole body during anaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to new spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to new spindle pole body during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007757"}


id: GO:0070224
data:
  {"annotated_genes":["SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107589],"is_not":false,"summary":null,"term":"GO:0070224"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2S (hydrogen sulfide) + a quinone = S0 (sulfane sulfur) + a hydroquinone.","definition_xrefs":["RHEA:30239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor","termid":"GO:0016672"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sulfide:quinone oxidoreductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:R17-RXN","Reactome:R-HSA-1614665"],"synonyms":[{"name":"sulfide-quinone reductase activity","type":"exact"},{"name":"sulphide:quinone oxidoreductase activity","type":"exact"}],"termid":"GO:0070224","terms_by_termid":{"GO:0070224":null}}


id: PBO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-1","termid":"PBO:0001687"}


id: FYPO:0002479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and has a larger volume, and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"viable swollen elongated vegetative cell","synonyms":[{"name":"viable elongated cell with increased cell volume","type":"exact"},{"name":"viable enlarged elongated cell","type":"related"},{"name":"viable large elongated cell","type":"related"},{"name":"viable swollen elongated cell during vegetative growth","type":"exact"},{"name":"viable swollen elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002479"}


id: FYPO:0004357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitosis","secondary_identifiers":["FYPO:0002832"],"synonyms":[{"name":"decreased protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during mitotic M phase","type":"related"},{"name":"decreased protein phosphorylation during mitotic M-phase","type":"related"},{"name":"decreased protein phosphorylation during mitotic nuclear division","type":"exact"},{"name":"decreased protein/peptide phosphorylation during mitosis","type":"exact"},{"name":"reduced protein phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0004357"}


id: MONDO:0006792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Purplish or brownish red discoloration of the skin associated with increase in circulating polyclonal globulins, usually gamma-globulins. This syndrome often occurs on the legs of women aged 20 to 40 years.","definition_xrefs":["MESH:D011694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purpura","termid":"MONDO:0002610"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"hyperglobulinemic purpura","secondary_identifiers":["MEDGEN:19585","SCTID:402852007","UMLS:C0034151","DOID:3325"],"termid":"MONDO:0006792","xrefs":{"Monarch":{"xref_id":"0006792"}}}


id: MONDO:0002577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal tumor with skeletal muscle differentiation, arising from the extrahepatic bile ducts.","definition_xrefs":["NCIT:C5860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver rhabdomyosarcoma","termid":"MONDO:0002849"},{"relation_name":"is_a","term_name":"extrahepatic bile duct sarcoma","termid":"MONDO:0024658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"extrahepatic bile duct rhabdomyosarcoma","secondary_identifiers":["UMLS:C2064434","DOID:3254","MEDGEN:473530"],"synonyms":[{"name":"bile duct rhabdomyosarcoma","type":"related"},{"name":"bile duct rhabdomyosarcoma (disease)","type":"exact"},{"name":"extrahepatic bile duct rhabdomyosarcoma","type":"exact"},{"name":"extrahepatic bile duct rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of extrahepatic bile duct","type":"exact"},{"name":"rhabdomyosarcoma of extrahepatic bile duct","type":"exact"},{"name":"rhabdomyosarcoma of the bile duct","type":"exact"},{"name":"rhabdomyosarcoma of the extrahepatic bile duct","type":"exact"}],"termid":"MONDO:0002577","xrefs":{"Monarch":{"xref_id":"0002577"}}}


id: FYPO:0000602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1 phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic G1 phase progression","synonyms":[{"name":"abnormal G1 phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G1 phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in G1","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: abnormal","type":"related"}],"termid":"FYPO:0000602"}


id: GO:0070402
data:
  {"annotated_genes":["SJAG_03476","SJAG_02488","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102220,113836,113924],"is_not":false,"summary":null,"term":"GO:0070402"}]},"cv_name":"molecular_function","definition":"Binding to the reduced form, NADPH, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NADP binding","termid":"GO:0050661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02488":null,"SJAG_03115":null,"SJAG_03476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NADPH binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NADP (reduced) binding","type":"exact"},{"name":"reduced NADP binding","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate binding","type":"exact"}],"termid":"GO:0070402","terms_by_termid":{"GO:0070402":null}}


id: PBO:0062640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily K member 1 pseudogene","termid":"PBO:0062640"}


id: PBO:0025468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-B homolog Cbh1","termid":"PBO:0025468"}


id: PBO:0031842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endoplasmic_reticulum_morphology","termid":"PBO:0031842"}


id: PBO:0044702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 Y-linked","termid":"PBO:0044702"}


id: MONDO:0024471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-inflammatory vasculopathy (obsolete MONDO:0024471)","secondary_identifiers":["Orphanet:496924"],"termid":"MONDO:0024471","xrefs":{"Monarch":{"xref_id":"0024471"}}}


id: MONDO:0027767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loss and redistribution of subcutaneous and/or visceral adipose tissue from specific regions of the body.","definition_xrefs":["NCIT:C131296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"partial lipodystrophy","secondary_identifiers":["MEDGEN:1386287","UMLS:C4316789","DOID:0080299"],"termid":"MONDO:0027767","xrefs":{"Monarch":{"xref_id":"0027767"}}}


id: MONDO:0019047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of hearing loss that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare deafness (obsolete MONDO:0019047)","secondary_identifiers":["NCIT:C36194","Orphanet:68361"],"synonyms":[{"name":"complete deafness","type":"exact"},{"name":"rare hearing loss","type":"exact"},{"name":"total deafness","type":"exact"}],"termid":"MONDO:0019047","xrefs":{"Monarch":{"xref_id":"0019047"}}}


id: GO:0006346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of constitutive heterochromatin by a pathway that includes methylation of genomic DNA such as CpG islands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"DNA methylation-dependent constitutive heterochromatin formation","synonyms":[{"name":"DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"DNA methylation-dependent heterochromatin formation","type":"exact"},{"name":"methylation-dependent chromatin silencing","type":"broad"},{"name":"methylation-dependent heterochromatic silencing","type":"broad"}],"termid":"GO:0006346"}


id: PR:P37382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04821","PRO:DNx","PANTHER:PTHR11800:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit RPB3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.10c","secondary_identifiers":["UniProtKB:P37382"],"synonyms":[{"name":"DNA-directed RNA polymerase II 33 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2C","type":"exact"}],"termid":"PR:P37382"}


id: MONDO:0032790
data:
  {"annotated_genes":["SJAG_00861"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86177],"is_not":false,"summary":null,"term":"MONDO:0032790"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with coarse facies and mild distal skeletal abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618505","DOID:0081443","UMLS:C5193134","MEDGEN:1682403"],"synonyms":[{"name":"NEDCFSA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH COARSE FACIES AND MILD DISTAL SKELETAL ABNORMALITIES","type":"related"}],"termid":"MONDO:0032790","terms_by_termid":{"MONDO:0032790":null},"xrefs":{"Monarch":{"xref_id":"0032790"}}}


id: PR:P0CT73
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.03","synonyms":[{"name":"Spom972h-rps1101","type":"exact"}],"termid":"PR:P0CT73"}


id: PBO:0041696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 2","termid":"PBO:0041696"}


id: PBO:0043521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3","termid":"PBO:0043521"}


id: FYPO:0005583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains higher levels of saturated fatty acids, and lower levels of unsaturated fatty acids, than normal.","definition_xrefs":["PMID:27053105","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased fatty acid saturation","synonyms":[{"name":"increased fatty acid saturation during mitotic cell cycle","type":"related"},{"name":"increased fatty acid saturation during vegetative growth","type":"exact"},{"name":"increased level of saturated fatty acids and decreased level of unsaturated fatty acids","type":"exact"},{"name":"increased saturated:unsaturated fatty acid ratio","type":"exact"}],"termid":"FYPO:0005583"}


id: MONDO:0009222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gollop-Wolfgang complex is a very rare malformation characterized by ectrodactyly of the hand and ipsilateral bifurcation of the femur.","definition_xrefs":["Orphanet:1986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Gollop-Wolfgang complex","secondary_identifiers":["MESH:C537917","UMLS:C1856789","GARD:2285","MEDGEN:341622","SCTID:716006003","OMIM:228250"],"synonyms":[{"name":"GWC","type":"related"},{"name":"Gollop-Wolfgang complex","type":"exact"},{"name":"bifid femur-monodactylous ectrodactyly syndrome","type":"exact"},{"name":"femur bifid with monodactylous ectrodactyly","type":"related"},{"name":"femur, unilateral bifid, with monodactylous ectrodactyly","type":"related"}],"termid":"MONDO:0009222","xrefs":{"Monarch":{"xref_id":"0009222"}}}


id: PBO:0076951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 1 induced transcript 1","termid":"PBO:0076951"}


id: MONDO:0018940
data:
  {"annotated_genes":["SJAG_04728","SJAG_00924","SJAG_04821","SJAG_00826","SJAG_03056","SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012518"},{"annotations":[85394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013883"},{"annotations":[84637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014543"},{"annotations":[84634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014542"},{"annotations":[84476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014590"},{"annotations":[85262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012157"},{"annotations":[85503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032596"}]},"cv_name":"mondo","definition":"Congenital myasthenic syndrome (CMS) is a group of genetic disorders of impaired neuromuscular transmission at the motor endplate characterized by fatigable muscle weakness.","definition_xrefs":["Orphanet:590"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete myasthenic syndrome with eye involvement (obsolete MONDO:0020260)","termid":"MONDO:0020260"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"neuromuscular junction disease","termid":"MONDO:0020124"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00826":null,"SJAG_00924":null,"SJAG_01872":null,"SJAG_03056":null,"SJAG_04728":null,"SJAG_04821":null},"genotype_count":0,"is_obsolete":false,"name":"congenital myasthenic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:V17.89","SCTID:230672006","UMLS:C0751882","MEDGEN:155650","icd11.foundation:1515367530","NANDO:1200021","NCIT:C84647","ICD9:358.00","NORD:1893","DOID:3635","MESH:D020294","GARD:11902","OMIMPS:601462"],"synonyms":[{"name":"CMS","type":"exact"},{"name":"Congenital Myasthenic Syndromes","type":"exact"},{"name":"congenital MG","type":"related"},{"name":"congenital myasthenia","type":"related"},{"name":"erb-Goldflam syndrome","type":"related"},{"name":"familial limb-girdle myasthenia","type":"related"},{"name":"myasthenia gravis congenital","type":"related"},{"name":"myasthenia gravis pseudoparalytica","type":"related"},{"name":"myasthenic syndrome, congenital","type":"exact"}],"termid":"MONDO:0018940","terms_by_termid":{"MONDO:0012157":null,"MONDO:0012518":null,"MONDO:0013883":null,"MONDO:0014542":null,"MONDO:0014543":null,"MONDO:0014590":null,"MONDO:0032596":null},"xrefs":{"Monarch":{"xref_id":"0018940"}}}


id: MONDO:0001357
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","definition":"Anemia caused by the reduction of hemoglobin in relation to the red cell volume. As a result, the red cells have an area of central pallor which is increased in size. The leading cause is iron deficiency.","definition_xrefs":["NCIT:C34380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hypochromic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0001931","SCTID:44452003","UMLS:C0002884","MEDGEN:8065","DOID:11759"],"synonyms":[{"name":"anaemia hypochromic","type":"exact"},{"name":"anemia hypochromic","type":"exact"},{"name":"hypochromic anaemia (disease)","type":"exact"},{"name":"hypochromic anemia","type":"exact"},{"name":"hypochromic anemia (disease)","type":"exact"}],"termid":"MONDO:0001357","terms_by_termid":{"MONDO:0008787":null},"xrefs":{"Monarch":{"xref_id":"0001357"}}}


id: GO:0007337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete unilateral process (obsolete GO:0007337)","synonyms":[{"name":"unilateral process","type":"exact"}],"termid":"GO:0007337"}


id: PBO:0068705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 86, pseudogene","termid":"PBO:0068705"}


id: GO:1902030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K18 acetylation.","definition_xrefs":["PMID:22110608","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K18 acetylation (obsolete GO:1902030)","synonyms":[{"name":"down regulation of histone H3 acetylation at K18","type":"exact"},{"name":"down regulation of histone H3-K18 acetylation","type":"exact"},{"name":"down regulation of histone H3K18 acetylation","type":"exact"},{"name":"down-regulation of histone H3 acetylation at K18","type":"exact"},{"name":"down-regulation of histone H3-K18 acetylation","type":"exact"},{"name":"down-regulation of histone H3K18 acetylation","type":"exact"},{"name":"downregulation of histone H3 acetylation at K18","type":"exact"},{"name":"downregulation of histone H3-K18 acetylation","type":"exact"},{"name":"downregulation of histone H3K18 acetylation","type":"exact"},{"name":"inhibition of histone H3 acetylation at K18","type":"exact"},{"name":"inhibition of histone H3-K18 acetylation","type":"narrow"},{"name":"inhibition of histone H3K18 acetylation","type":"exact"},{"name":"negative regulation of histone H3 acetylation at K18","type":"exact"},{"name":"negative regulation of histone H3K18 acetylation","type":"exact"}],"termid":"GO:1902030"}


id: GO:0071534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a TRAF-type zinc finger (zf-TRAF) domain interaction.","definition_xrefs":["GOC:amm","InterPro:IPR001293"],"gene_count":0,"genotype_count":0,"name":"obsolete zf-TRAF domain-mediated complex assembly (obsolete GO:0071534)","synonyms":[{"name":"TRAF-type zinc finger domain-mediated complex assembly","type":"exact"},{"name":"zinc finger TRAF-type domain-mediated complex assembly","type":"exact"},{"name":"zinc-finger-TRAF domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071534"}


id: GO:0031787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a H9 melatonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"H9 melatonin receptor binding","synonyms":[{"name":"H9 melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031787"}


id: MONDO:0032747
data:
  {"annotated_genes":["SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86348],"is_not":false,"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydatidiform mole","termid":"MONDO:0006248"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01156":null},"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole, recurrent, 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18368","MEDGEN:1677210","UMLS:C5193094","OMIM:618432"],"synonyms":[{"name":"HYDATIDIFORM MOLE, RECURRENT, 4","type":"related"},{"name":"HYDM4","type":"related"}],"termid":"MONDO:0032747","terms_by_termid":{"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0032747"}}}


id: MONDO:0024633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kidney damage that results from chronically elevated blood pressure; complications include glomerular damage resulting in proteinuria and hematuria.","definition_xrefs":["NCIT:C4757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypertensive nephropathy","secondary_identifiers":["UMLS:C0848548","MEDGEN:167258","MESH:C563161","SCTID:38481006","ICD9:403.90","OMIM:608026"],"synonyms":[{"name":"HNP1","type":"exact"},{"name":"hypertensive nephropathy","type":"exact"},{"name":"hypertensive renal disease","type":"exact"}],"termid":"MONDO:0024633","xrefs":{"Monarch":{"xref_id":"0024633"}}}


id: PBO:0029777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_branched,_elongated_vegetative_cell","termid":"PBO:0029777"}


id: FYPO:0006310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-3'-diphospho-5'-guanosine diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal DNA-3'-diphospho-5'-guanosine diphosphatase activity","termid":"FYPO:0006310"}


id: PBO:0075484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily D member 2, pseudogene","termid":"PBO:0075484"}


id: PBO:0039560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 53","termid":"PBO:0039560"}


id: PBO:0049542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 6","termid":"PBO:0049542"}


id: MONDO:1011550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Legg-Calvé-Perthes disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis, dog","termid":"MONDO:1011171"},{"relation_name":"is_a","term_name":"Legg-Calvé-Perthes disease, non-human animal","termid":"MONDO:1011453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Legg-Calvé-Perthes disease, dog","secondary_identifiers":["OMIA:000586-9615"],"termid":"MONDO:1011550","xrefs":{"Monarch":{"xref_id":"1011550"}}}


id: PBO:0029719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_lariat_intron_level","termid":"PBO:0029719"}


id: PBO:0091083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit e","termid":"PBO:0091083"}


id: GO:0002620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of non-professional antigen presenting cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002619"},{"relation_name":"negatively_regulates","term_name":"non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of non-professional antigen presenting cell antigen processing and presentation","synonyms":[{"name":"down regulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"down-regulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"downregulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"inhibition of non-professional antigen presenting cell antigen processing and presentation","type":"narrow"}],"termid":"GO:0002620"}


id: GO:2000495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000495"}


id: GO:0180002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of zinc ions from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["PMID:28196538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal zinc excretion","synonyms":[{"name":"renal zinc ion excretion","type":"exact"},{"name":"renal zinc secretion","type":"exact"}],"termid":"GO:0180002"}


id: PBO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Moeb/ThiF domain","termid":"PBO:0000765"}


id: PBO:0059183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin pseudogene 1","termid":"PBO:0059183"}


id: PBO:0054288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1679","termid":"PBO:0054288"}


id: RO:0002505
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has intermediate c if and only if p has parts p1, p2 and p1 has output c, and p2 has input c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intermediate","termid":"RO:0002505"}


id: PR:O74947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC553.10 gene.","definition_xrefs":["UniProtKB:O74947","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.10","synonyms":[{"name":"Spom972h-SPCC553.10","type":"exact"}],"termid":"PR:O74947"}


id: GO:1902387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ceramide 1-phosphate.","definition_xrefs":["PMID:23863933","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"ceramide binding","termid":"GO:0097001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"ceramide 1-phosphate binding","termid":"GO:1902387"}


id: PBO:0077008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 10","termid":"PBO:0077008"}


id: MONDO:0013666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive Stickler syndrome in which the cause of the disease is a mutation in the COL9A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Stickler syndrome","termid":"MONDO:0019354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"Stickler syndrome, type 5","secondary_identifiers":["GARD:18359","OMIM:614284","UMLS:C3280342","MEDGEN:481972"],"synonyms":[{"name":"COL9A2 autosomal recessive Stickler syndrome","type":"exact"},{"name":"STICKLER syndrome, type V","type":"related"},{"name":"STL5","type":"related"},{"name":"autosomal recessive Stickler syndrome caused by mutation in COL9A2","type":"exact"}],"termid":"MONDO:0013666","xrefs":{"Monarch":{"xref_id":"0013666"}}}


id: PBO:0044603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 8 like 2","termid":"PBO:0044603"}


id: PBO:0054304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1696","termid":"PBO:0054304"}


id: PBO:0089149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF126 ortholog","termid":"PBO:0089149"}


id: PBO:0083752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential core component of mitochondrial TIM22 complex; involved in insertion of polytopic proteins into inner membrane; forms channel through which proteins are imported; different regions of Tim22p have functionally diverse roles in recruiting partner subunits to core channel","termid":"PBO:0083752"}


id: PBO:0051829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 4","termid":"PBO:0051829"}


id: PBO:0074937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 103B","termid":"PBO:0074937"}


id: GO:0052105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of host processes resulting in the thickening of its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host cell wall thickening (obsolete GO:0052105)","synonyms":[{"name":"activation by organism of defense-related host cell wall thickening","type":"exact"},{"name":"activation by organism of host defensive cell wall thickening","type":"exact"},{"name":"activation by symbiont of defense-related host cell wall thickening","type":"exact"},{"name":"induction by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by organism of host defensive cell wall thickening","type":"exact"},{"name":"positive regulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of host defensive cell wall thickening","type":"related"},{"name":"positive regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"stimulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"up regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"up-regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"upregulation by symbiont of defense-related host cell wall thickening","type":"related"}],"termid":"GO:0052105"}


id: PBO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase (predicted)","termid":"PBO:0000224"}


id: PBO:0080898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta pseudogene 1","termid":"PBO:0080898"}


id: MONDO:0019302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucopolysaccharidosis with skin involvement (obsolete MONDO:0019302)","termid":"MONDO:0019302","xrefs":{"Monarch":{"xref_id":"0019302"}}}


id: GO:0019222
data:
  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id: PBO:0062859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoraplin","termid":"PBO:0062859"}


id: GO:1905507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cytoplasmic sequestering of protein that is involved in mitotic G2 DNA damage checkpoint.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:10523629"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of protein involved in mitotic G2 DNA damage checkpoint (obsolete GO:1905507)","termid":"GO:1905507"}


id: PBO:0047902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q36)","termid":"PBO:0047902"}


id: PBO:0055616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3055","termid":"PBO:0055616"}


id: MONDO:0011303
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84323],"is_not":false,"summary":null,"term":"MONDO:0011303"}]},"cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the ACTN4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"},{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:93213","GARD:15353","MEDGEN:1636833","UMLS:C4551527","DOID:0111128","OMIM:603278","MESH:C538457"],"synonyms":[{"name":"ACTN4 focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS1","type":"exact"},{"name":"familial idiopathic steroid-resistant nephrotic syndrome with focal segmental glomerulosclerosis","type":"exact"},{"name":"familial idiopathic steroid-resistant nephrotic syndrome with focal segmental hyalinosis","type":"related"},{"name":"focal segmental glomerulosclerosis 1","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in ACTN4","type":"exact"},{"name":"focal segmental glomerulosclerosis type 1","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 1","type":"related"}],"termid":"MONDO:0011303","terms_by_termid":{"MONDO:0011303":null},"xrefs":{"Monarch":{"xref_id":"0011303"}}}


id: GO:0160191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a C28-steroid + O2 + reduced NADPH--hemoprotein reductase = a (22S)-22-hydroxy C28-steroid + H+ + H2O + oxidized NADPH--hemoprotein reductase. Also catalyzes the C-22 hydroxylation of a variety of C27 and C29 steroids.","definition_xrefs":["EC:1.14.14.178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"steroid 22S-hydroxylase activity","synonyms":[{"name":"steroid C-22 hydroxylase activity","type":"exact"}],"termid":"GO:0160191"}


id: PBO:0004583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication endonuclease-helicase Dna2","termid":"PBO:0004583"}


id: PBO:0085456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; regulated by Ste12p during mating; localized to sites of polarized growth; member of a fungal-specific gene family; PRM6 has a paralog, KCH1, that arose from the whole genome duplication","termid":"PBO:0085456"}


id: GO:0010062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that suppresses trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of trichoblast fate specification","termid":"GO:0010061"},{"relation_name":"is_a","term_name":"negative regulation of plant epidermal cell differentiation","termid":"GO:1903889"},{"relation_name":"negatively_regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trichoblast fate specification","synonyms":[{"name":"down regulation of trichoblast fate","type":"exact"},{"name":"down-regulation of trichoblast fate","type":"exact"},{"name":"downregulation of trichoblast fate","type":"exact"},{"name":"inhibition of trichoblast fate","type":"narrow"}],"termid":"GO:0010062"}


id: SO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the extension of 5' UTR, with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_elongation","synonyms":[{"name":"5 prime UTR elongation","type":"exact"}],"termid":"SO:0002014"}


id: MONDO:0004962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endometrial carcinoma is a carcinoma that arises from the endometrium (the lining of the uterus or womb). It is the result of the abnormal growth of cells that have the ability to invade or spread to other parts of the body. The first sign is most often vaginal bleeding not associated with a menstrual period. Other symptoms include pain with urination or sexual intercourse, or pelvic pain. Endometrial cancer occurs most commonly after menopause. In stage II the cancer has spread from the body of the uterus and is growing into the supporting connective tissue of the cervix (called the cervical stroma). The cancer has spread into connective tissue of the cervix, but has not spread outside the uterus.","definition_xrefs":["EFO:0000206"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete stage of disease (obsolete MONDO:0021007)","termid":"MONDO:0021007"},{"relation_name":"is_a","term_name":"endometrioid adenocarcinoma","termid":"MONDO:0005026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"stage II endometrioid carcinoma","termid":"MONDO:0004962","xrefs":{"Monarch":{"xref_id":"0004962"}}}


id: MONDO:0100395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(5;11)(q35;p15). (A cytogenetic abnormality that refers to the translocation of chromosome 11p15 with chromosome 5q35. It results in the formation of NUP98/NSD1 fusion gene. It is associated with the development of acute myeloid leukemia with t(5;11)(q35;p15); NUP98-NSD1.)","definition_xrefs":["NCIT:C131503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(5;11)(q35;p15)","secondary_identifiers":["NCIT:C131502"],"synonyms":[{"name":"AML, t(5;11)(q35;p15)","type":"exact"}],"termid":"MONDO:0100395","xrefs":{"Monarch":{"xref_id":"0100395"}}}


id: MONDO:0007712
data:
  {"annotated_genes":["SJAG_00539","SJAG_00322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84952,84953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"}]},"cv_name":"mondo","definition":"Oculoauriculovertebral spectrum (OAVS) with radial defects is a rare branchial arches and limb primordia development disorder characterized by variable degrees of uni- or bilateral craniofacial malformation and radial defects that result in extremely variable phenotypic manifestations. Characteristic features include low postnatal weight, short stature, vertebral defects, hearing loss, and facial dysmorphism (incl. facial asymmetry, external, middle, and inner ear malformations, orofacial clefts, and mandibular hypoplasia). These features are invariably associated with radial defects, such as preaxial polydactyly, thumb and/or radius hypoplasia/agenesis, or triphalangeal thumb. Cardiac, pulmonary, renal, and central nervous system involvement has also been reported.","definition_xrefs":["Orphanet:2549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00322":null,"SJAG_00539":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oculoauriculovertebral spectrum with radial defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0220681","SCTID:726722009","MEDGEN:67392","OMIM:141400","GARD:3653"],"synonyms":[{"name":"Goldenhar syndrome with ipsilateral radial defect","type":"related"},{"name":"Moeschler Clarren syndrome","type":"related"},{"name":"Moeschler-Clarren syndrome","type":"exact"},{"name":"Oavs with radial defect","type":"related"},{"name":"hemifacial microsomia with radial defects","type":"related"},{"name":"hemifacial microsomia-radial defects syndrome","type":"exact"},{"name":"microsomia hemifacial radial defects","type":"related"},{"name":"oculoauriculovertebral spectrum with radial defect","type":"related"}],"termid":"MONDO:0007712","terms_by_termid":{"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0007712"}}}


id: FYPO:0005910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to endoplasmic reticulum stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"decreased protein accumulation during cellular response to endoplasmic reticulum stress","type":"related"},{"name":"decreased protein level during cellular response to ER stress","type":"exact"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0005910"}


id: PBO:0057991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3915","termid":"PBO:0057991"}


id: PBO:0039039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL1 antisense RNA 1","termid":"PBO:0039039"}


id: MONDO:0009666
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85505],"is_not":false,"summary":null,"term":"MONDO:0009666"}]},"cv_name":"mondo","definition":"A rare, early-onset and life-threatening, multiple carboxylase deficiency that when left untreated, is characterized by vomiting, tachypnea, irritability, lethargy, exfoliative dermatitis, and seizures that can worsen to coma and death.","definition_xrefs":["Orphanet:79242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"multiple carboxylase deficiency","termid":"MONDO:0015454"},{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"holocarboxylase synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268581","DOID:859","GARD:2721","ICD9:270.8","SCTID:360369003","MESH:D028922","NCIT:C98842","OMIM:253270","MEDGEN:120653","NANDO:1200821","SCTID:15307001"],"synonyms":[{"name":"HLCS deficiency","type":"related"},{"name":"biotin-(propionyl-CoA-carboxylase) ligase deficiency","type":"exact"},{"name":"early-onset multiple carboxylase deficiency","type":"exact"},{"name":"holocarboxylase synthase deficiency","type":"exact"},{"name":"holocarboxylase synthetase deficiency","type":"exact"},{"name":"multiple carboxylase deficiency","type":"broad"},{"name":"multiple carboxylase deficiency - neonatal onset","type":"exact"},{"name":"multiple carboxylase deficiency, early onset","type":"related"},{"name":"multiple carboxylase deficiency, neonatal form","type":"related"},{"name":"neonatal multiple carboxylase deficiency","type":"exact"}],"termid":"MONDO:0009666","terms_by_termid":{"MONDO:0009666":null},"xrefs":{"Monarch":{"xref_id":"0009666"}}}


id: PBO:0036431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary septum and spore wall linear 1,3-beta-glucan synthase catalytic subunit Bgs1","termid":"PBO:0036431"}


id: GO:0004108
data:
  {"annotated_genes":["SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98660],"is_not":false,"summary":null,"term":"GO:0004108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA, where the acetyl group is added to the si-face of oxaloacetate; acetyl-CoA thus provides the two carbon atoms of the pro-S carboxymethyl group.","definition_xrefs":["EC:2.3.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate synthase activity","termid":"GO:0036440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"citrate (Si)-synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70975"],"synonyms":[{"name":"(R)-citric synthase activity","type":"related"},{"name":"acetyl-CoA:oxaloacetate C-acetyltransferase [thioester-hydrolysing, (pro-S)-carboxymethyl forming]","type":"related"},{"name":"citrate condensing enzyme activity","type":"related"},{"name":"citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)->acetyl-CoA) activity","type":"related"},{"name":"citrate oxaloacetate-lyase ((pro-3S)-CH2COO-rightacetyl-CoA)","type":"related"},{"name":"citrate oxaloacetate-lyase [(pro-3S)-CH2COOrightacetyl-CoA]","type":"related"},{"name":"citrate oxaloacetate-lyase, CoA-acetylating activity","type":"related"},{"name":"citrate synthase activity","type":"broad"},{"name":"citrate synthetase activity","type":"related"},{"name":"citric synthase activity","type":"related"},{"name":"citric-condensing enzyme activity","type":"related"},{"name":"citrogenase activity","type":"related"},{"name":"condensing enzyme activity","type":"broad"},{"name":"oxalacetic transacetase activity","type":"related"},{"name":"oxaloacetate transacetase activity","type":"related"}],"termid":"GO:0004108","terms_by_termid":{"GO:0004108":null}}


id: PATO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000560 height value (obsolete PATO:0000560)","termid":"PATO:0000560"}


id: MONDO:0033056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic facial cleft (obsolete MONDO:0033056)","secondary_identifiers":["Orphanet:414726"],"termid":"MONDO:0033056","xrefs":{"Monarch":{"xref_id":"0033056"}}}


id: PBO:0077497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 216","termid":"PBO:0077497"}


id: PBO:0036299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom6 (predicted)","termid":"PBO:0036299"}


id: PBO:0073529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 2","termid":"PBO:0073529"}


id: PBO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transporter complex subunit Ctr5","termid":"PBO:0002151"}


id: MONDO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"familial recurrent peripheral facial palsy","secondary_identifiers":["MEDGEN:342742","Orphanet:2809","GARD:16609","MESH:C565028","OMIM:134200","ICD10CM:G51.0","UMLS:C1851399"],"synonyms":[{"name":"facial palsy, familial recurrent peripheral","type":"related"},{"name":"familial recurrent Bell palsy","type":"exact"}],"termid":"MONDO:0007592","xrefs":{"Monarch":{"xref_id":"0007592"}}}


id: PBO:0076827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase associated protein 1","termid":"PBO:0076827"}


id: GO:1904600
data:
  {"annotated_genes":["SJAG_01993","SJAG_01894","SJAG_01943","SJAG_02989","SJAG_02864","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87469,91712,97490,98094,98175,113453],"is_not":false,"summary":null,"term":"GO:1904600"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an actin fusion focus.","definition_xrefs":["GOC:TermGenie","PMID:25825517","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"part_of","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0030036","GO:0000747","GO:0007010"],"is_obsolete":false,"name":"mating projection actin fusion focus assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin fusion focus assembly","type":"broad"},{"name":"actin fusion focus formation","type":"exact"}],"termid":"GO:1904600","terms_by_termid":{"GO:1904600":null}}


id: SO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases bound to a repeating unit made of a 2-deoxy-D-ribose ring connected to a phosphate backbone.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA","termid":"SO:0000352"}


id: MONDO:0018599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"nuclear oculomotor paralysis","termid":"MONDO:0015083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital oculomotor nerve palsy","secondary_identifiers":["GARD:21836","UMLS:C5680054","MEDGEN:1804232","Orphanet:440221","icd11.foundation:2135160463"],"synonyms":[{"name":"congenital CNIII lesion","type":"exact"},{"name":"congenital third cranial nerve palsy","type":"exact"}],"termid":"MONDO:0018599","xrefs":{"Monarch":{"xref_id":"0018599"}}}


id: MOD:00596
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS.","definition_xrefs":["Unimod:276","DeltaMass:235","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","synonyms":[{"name":"AEBS","type":"related"},{"name":"AEBSF","type":"exact"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:00596"}


id: SO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA cytosine base feature, modified by a hydroxymethyl group at the 5 carbon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_hydroxymethylcytosine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"5-hmC","type":"exact"},{"name":"5-hydroxymethylcytosine","type":"exact"}],"termid":"SO:0001960"}


id: PBO:0059968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 13","termid":"PBO:0059968"}


id: PATO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000271 prepulse inhibition (obsolete PATO:0000271)","termid":"PATO:0000271"}


id: GO:0008777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N2-acetyl-L-ornithine + H2O = acetate + L-ornithine.","definition_xrefs":["EC:3.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787","GO:0019213"],"is_obsolete":false,"name":"acetylornithine deacetylase activity","secondary_identifiers":["RHEA:15941","MetaCyc:ACETYLORNDEACET-RXN"],"synonyms":[{"name":"2-N-acetyl-L-ornithine amidohydrolase activity","type":"related"},{"name":"N-acetylornithinase activity","type":"broad"},{"name":"N2-acetyl-L-ornithine amidohydrolase activity","type":"related"},{"name":"acetylornithinase activity","type":"broad"}],"termid":"GO:0008777"}


id: MONDO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis of the coronary vasculature.","definition_xrefs":["NCIT:C35505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"atherosclerosis","termid":"MONDO:0005311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary atherosclerosis","secondary_identifiers":["icd11.foundation:1280712786","MEDGEN:3623","SCTID:443502000","ICD9:414.00","UMLS:C0010054"],"synonyms":[{"name":"arteriosclerosis disorder of coronary artery","type":"exact"},{"name":"atherosclerosis of coronary artery","type":"broad"},{"name":"coronary artery arteriosclerosis (disease)","type":"exact"},{"name":"coronary artery arteriosclerosis disorder","type":"exact"},{"name":"coronary atherosclerosis","type":"exact"}],"termid":"MONDO:0021661","xrefs":{"Monarch":{"xref_id":"0021661"}}}


id: SO:0001282
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylcytidine","secondary_identifiers":["RNAMOD:021"],"synonyms":[{"name":"5-methylcytidine","type":"exact"},{"name":"five methylcytidine","type":"exact"},{"name":"m5C","type":"exact"}],"termid":"SO:0001282"}


id: GO:0015293
data:
  {"annotated_genes":["SJAG_04714","SJAG_02958","SJAG_03820","SJAG_02779","SJAG_00057","SJAG_03606","SJAG_02780","SJAG_01406","SJAG_03960","SJAG_04673","SJAG_04068","SJAG_03595","SJAG_04506","SJAG_04905","SJAG_03401","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116337,113303,72485,91692,113309,75709,102161,109790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[116341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[99864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[100843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[94967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[97240,91774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[104863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[91258,91264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[100846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[94968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[87658,94734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","PMID:10839820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_01406":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03401":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04506":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cotransporter activity","type":"broad"},{"name":"porter activity","type":"broad"},{"name":"symport","type":"related"}],"termid":"GO:0015293","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0008506":null,"GO:0015295":null,"GO:0015366":null,"GO:0015379":null,"GO:0015505":null,"GO:0034216":null,"GO:0097434":null}}


id: PBO:0085472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Presumed antiporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; expression of gene is up-regulated in cells exhibiting reduced susceptibility to azoles","termid":"PBO:0085472"}


id: GO:1904503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lipophagy.","definition_xrefs":["GO_REF:0000058","GOC:autophagy","GOC:dph","GOC:TermGenie","PMID:25383539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"regulation of lipophagy","termid":"GO:1904502"},{"relation_name":"negatively_regulates","term_name":"lipophagy","termid":"GO:0061724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipophagy","synonyms":[{"name":"down regulation of lipophagy","type":"exact"},{"name":"down-regulation of lipophagy","type":"exact"},{"name":"downregulation of lipophagy","type":"exact"},{"name":"inhibition of lipophagy","type":"narrow"}],"termid":"GO:1904503"}


id: PBO:0060679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"norrin cystine knot growth factor NDP","termid":"PBO:0060679"}


id: MONDO:0010560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked cleft palate and ankyloglossia is a rare, genetic developmental defect during embryogenesis syndrome characterized by the association of complete, partial or submucous cleft palate and ankyloglossia. Patients may also present abnormal uvula (e.g. absent, bifid, shortened or laterally deviated), short lingual frenulum and dental anomalies (e.g. buccal crossbite, absent and/or misshapen teeth). Digital abnormalities, such as mild clinodactyly and/or syndactyly, have also been reported.","definition_xrefs":["Orphanet:324601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate with or without ankyloglossia, X-linked","secondary_identifiers":["OMIM:303400","SCTID:766761000","DOID:0060613","UMLS:C1844830","GARD:1394","MEDGEN:375520","MESH:C536426"],"synonyms":[{"name":"CPX","type":"related"},{"name":"X-linked cleft palate","type":"related"},{"name":"X-linked cleft palate and ankyloglossia","type":"exact"},{"name":"cleft palate X-linked","type":"related"},{"name":"cleft palate with ankyloglossia","type":"exact"},{"name":"cleft palate with or without ankyloglossia, X-linked","type":"exact"},{"name":"cleft palate, X-linked","type":"related"}],"termid":"MONDO:0010560","xrefs":{"Monarch":{"xref_id":"0010560"}}}


id: FYPO:0007730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007730"}


id: PBO:0045835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 25","termid":"PBO:0045835"}


id: PBO:0061086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 4","termid":"PBO:0061086"}


id: GO:0098628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphate residues from peptidyl-N-phospho-arginine to form peptidyl-arginine.","definition_xrefs":["PMID:23770242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-N-phospho-arginine dephosphorylation","termid":"GO:0098628"}


id: PBO:0078710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-5","termid":"PBO:0078710"}


id: PBO:0066919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 221","termid":"PBO:0066919"}


id: PBO:0074070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 45","termid":"PBO:0074070"}


id: MONDO:0022936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de Hauwere Leroy adriaenssens syndrome","secondary_identifiers":["UMLS:C2931078","MEDGEN:419709","MESH:C535991"],"synonyms":[{"name":"iris dysplasia, orbital hypertelorism, and psychomotor retardation","type":"related"}],"termid":"MONDO:0022936","xrefs":{"Monarch":{"xref_id":"0022936"}}}


id: GO:0098930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"axonal transport","secondary_identifiers":["Wikipedia:Axoplasmic_transport"],"synonyms":[{"name":"axon cargo transport","type":"exact"},{"name":"axoplasmic transport","type":"exact"}],"termid":"GO:0098930"}


id: GO:0035834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an indole alkaloid, an alkaloid containing an indole skeleton.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole alkaloid metabolic process","synonyms":[{"name":"indole alkaloid metabolism","type":"exact"}],"termid":"GO:0035834"}


id: PBO:0045469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5 pseudogene 1","termid":"PBO:0045469"}


id: GO:0035129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the hindlimb are generated and organized.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic limb morphogenesis","termid":"GO:0035127"},{"relation_name":"is_a","term_name":"hindlimb morphogenesis","termid":"GO:0035137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic hindlimb morphogenesis","termid":"GO:0035129"}


id: MONDO:0006424
data:
  {"annotated_genes":["SJAG_01111","SJAG_00991","SJAG_00490","SJAG_05313","SJAG_05346","SJAG_04213","SJAG_00289","SJAG_04755","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[86157,86159,86158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"},{"annotations":[84411,84412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[86551,86550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[86164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that arises from the soft tissue. The most common types are lipomatous (fatty), vascular, smooth muscle, fibrous, and fibrohistiocytic neoplasms.","definition_xrefs":["NCIT:C3377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective and soft tissue neoplasm","termid":"MONDO:0044334"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00490":null,"SJAG_00991":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"soft tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:11495","ONCOTREE:SOFTTISSUE","EFO:1000541","SCTID:387837005","UMLS:C0037579"],"synonyms":[{"name":"SOFTTISSUE","type":"related"},{"name":"neoplasm of soft tissue","type":"exact"},{"name":"neoplasm of the soft tissue","type":"exact"},{"name":"soft tissue neoplasm","type":"exact"},{"name":"soft tissue tumor","type":"exact"},{"name":"soft tissue tumors","type":"exact"},{"name":"soft tissue tumour","type":"exact"},{"name":"soft tissue tumours","type":"exact"},{"name":"tumor of soft tissue","type":"exact"},{"name":"tumor of the soft tissue","type":"exact"},{"name":"tumour of soft tissue","type":"exact"},{"name":"tumour of the soft tissue","type":"exact"}],"termid":"MONDO:0006424","terms_by_termid":{"MONDO:0011655":null,"MONDO:0011705":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0006424"}}}


id: PR:Q09906
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 184B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184 homolog C30D11.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.06c","secondary_identifiers":["UniProtKB:Q09906"],"synonyms":[{"name":"Spom972h-TMEM184B","type":"exact"}],"termid":"PR:Q09906"}


id: MONDO:0004813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pneumothorax in which air enters into the pleural cavity.","definition_xrefs":["DOID:9534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous pneumothorax","secondary_identifiers":["UMLS:C0152600","ICD9:011.73","MEDGEN:509067","ICD9:011.7","ICD9:011.70","ICD9:011.71","ICD9:011.72","ICD9:011.76","SCTID:29731002"],"termid":"MONDO:0004813","xrefs":{"Monarch":{"xref_id":"0004813"}}}


id: PBO:0003448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-methylethanolamine N-methyltransferase (predicted)","termid":"PBO:0003448"}


id: PBO:0063033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 1","termid":"PBO:0063033"}


id: FYPO:0000634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to centromere during vegetative growth","synonyms":[{"name":"abolished protein localisation to centromere during vegetative growth","type":"exact"},{"name":"abolished protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"protein absent from centromere during vegetative growth","type":"related"},{"name":"protein localization to centromere abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000634"}


