# terms

id: MONDO:1011591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, domestic cat","secondary_identifiers":["OMIA:000817-9685"],"termid":"MONDO:1011591","xrefs":{"Monarch":{"xref_id":"1011591"}}}


id: PBO:0054925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2339","termid":"PBO:0054925"}


id: GO:0030206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"chondroitin sulfate metabolic process","termid":"GO:0030204"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"part_of","term_name":"chondroitin sulfate proteoglycan biosynthetic process","termid":"GO:0050650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"chondroitin sulfate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6567"],"synonyms":[{"name":"chondroitin sulfate anabolism","type":"exact"},{"name":"chondroitin sulfate biosynthesis","type":"exact"},{"name":"chondroitin sulfate formation","type":"exact"},{"name":"chondroitin sulfate synthesis","type":"exact"},{"name":"chondroitin sulphate biosynthesis","type":"exact"},{"name":"chondroitin sulphate biosynthetic process","type":"exact"}],"termid":"GO:0030206"}


id: GO:0052899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + N(1),N(12)-diacetylspermine + O2 = 3-acetamidopropanal + H2O2 + N(1)-acetylspermidine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N(1),N(12)-diacetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity (obsolete GO:0052899)","termid":"GO:0052899"}


id: MONDO:0015724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-distal trisomy 13q is a rare chromosomal anomaly disorder, resulting from the partial duplication of the proximal long arm of chromosome 13, with a highly variable phenotype principally characterized by increased polymorphonuclear leucocyte projections and persistence of fetal hemoglobin, as well as growth and developmental delay and craniofacial dysmorphism (incl. microcephaly, depressed nasal bridge, stubby nose, low-set, malformed ears, cleft lip/palate, micrognathia). Strabismus, clinodactyly and undescended testes in males may also be associated.","definition_xrefs":["Orphanet:1702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 13q trisomy","termid":"MONDO:0022177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-distal trisomy 13q","secondary_identifiers":["MEDGEN:1637117","GARD:18738","SCTID:764996009","UMLS:C4707260"],"synonyms":[{"name":"non-distal duplication 13q","type":"exact"},{"name":"non-distal trisomy type 13q","type":"exact"},{"name":"non-telomeric trisomy 13q","type":"exact"}],"termid":"MONDO:0015724","xrefs":{"Monarch":{"xref_id":"0015724"}}}


id: FYPO:0004213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the physical attachment of sister chromatids to mitotic spindle microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"},{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000337","FYPO:0000641","FYPO:0000138","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"abnormal attachment of mitotic spindle microtubules to kinetochore during vegetative growth","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore during mitosis","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004213"}


id: GO:2000323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucocorticoid receptor signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033144"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid receptor signaling pathway","termid":"GO:2000322"},{"relation_name":"negatively_regulates","term_name":"nuclear receptor-mediated glucocorticoid signaling pathway","termid":"GO:0042921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glucocorticoid receptor signaling pathway","synonyms":[{"name":"negative regulation of glucocorticoid receptor signalling pathway","type":"exact"}],"termid":"GO:2000323"}


id: PBO:0064463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 1, catalytic subunit","termid":"PBO:0064463"}


id: GO:1905517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a macrophage from one site to another.","definition_xrefs":["GOC:TermGenie","GO_REF:0000091","PMID:25749876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage migration","termid":"GO:1905517"}


id: PBO:0057400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548h-2","termid":"PBO:0057400"}


id: PBO:0085088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope protein; required for SPB insertion, SPB duplication, Kar5p localization near the SPB and nuclear fusion; interacts with Mps2p to tether half-bridge to core SPB; N-terminal acetylation by Eco1p regulates its role in nuclear organization; localizes to the SPB half bridge and telomeres during meiosis; required with Ndj1p and Csm4p for meiotic bouquet formation and telomere-led rapid prophase movement; member of the SUN protein family (Sad1-UNC-84 homology)","termid":"PBO:0085088"}


id: GO:1900533
data:
  {"annotated_genes":["SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"palmitic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1900533","terms_by_termid":{"GO:1900535":null}}


id: GO:0140547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition of seed longevity is the ordered series of events during seed development, that prevent embryo deterioration and ROS damage and thus contribute to seed viability over time or in response to adverse environmental conditions. These events include protective (e.g. production of glassy cytoplasm ) and repair (e.g. oxidative stress responses) processes.","definition_xrefs":["PMID:26637538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of seed longevity","termid":"GO:0140547"}


id: GO:0033541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on odd-numbered carbons are degraded. In this pathway, a cis-3-enoyl-CoA is generated by the core beta-oxidation pathway, and then converted to a trans-2-enoyl-CoA, which can return to the core beta-oxidation pathway for complete degradation. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, odd number","termid":"GO:0033541"}


id: FYPO:0007190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is increased along the length of the chromosome arms during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:31483748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"increased sister chromatid cohesion along chromosome arms during mitotic interphase","synonyms":[{"name":"increased mitotic sister chromatid cohesion along chromosome arms during interphase","type":"exact"},{"name":"increased sister chromatid cohesion along chromosome arms during interphase of mitotic cell cycle","type":"exact"},{"name":"increased sister chromatid cohesion along chromosome arms during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007190"}


id: PBO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antiparallel microtubule cross-linking factor Ase1","termid":"PBO:0001220"}


id: MONDO:0014858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the HIVEP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 43","secondary_identifiers":["UMLS:C4310771","OMIM:616977","SCTID:765434008","DOID:0070073","MEDGEN:934738","GARD:13179"],"synonyms":[{"name":"HIVEP2 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"HIVEP2-related intellectual disability","type":"related"},{"name":"MRD43","type":"exact"},{"name":"autosomal dominant intellectual disability 43","type":"exact"},{"name":"autosomal dominant intellectual disability-43","type":"related"},{"name":"autosomal dominant mental retardation 43","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 43","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in HIVEP2","type":"exact"},{"name":"intellectual disability, autosomal dominant 43","type":"exact"},{"name":"intellectual disability, autosomal dominant type 43","type":"exact"},{"name":"mental retardation, autosomal dominant 43","type":"exact"},{"name":"mental retardation, autosomal dominant type 43","type":"exact"}],"termid":"MONDO:0014858","xrefs":{"Monarch":{"xref_id":"0014858"}}}


id: GO:0140329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lysophospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["PMID:15661733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid translocation","termid":"GO:0045332"},{"relation_name":"is_a","term_name":"lysophospholipid transport","termid":"GO:0051977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"lysophospholipid translocation","termid":"GO:0140329"}


id: PBO:0041641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1G antisense RNA 1","termid":"PBO:0041641"}


id: PBO:0109295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MX1 antisense RNA 1","termid":"PBO:0109295"}


id: MONDO:0004963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute lymphoblastic leukemia of T-cell origin. It comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)","definition_xrefs":["NCIT:C3183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"T-cell leukemia","termid":"MONDO:0005525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"T-cell acute lymphoblastic leukemia","secondary_identifiers":["MEDGEN:368378","CSP:2004-1803","DOID:5603","EFO:0000209","HGNC:5056","SCTID:110007008","CSP:2004-1600","ICDO:9837/3","SCTID:277575008","UMLS:C1961099","NANDO:2200003"],"synonyms":[{"name":"T acute lymphoblastic leukaemia","type":"exact"},{"name":"T acute lymphoblastic leukemia","type":"exact"},{"name":"T-ALL","type":"exact"},{"name":"T-cell ALL","type":"exact"},{"name":"T-cell acute lymphoblastic leukaemia","type":"exact"},{"name":"T-cell acute lymphoblastic leukemia","type":"exact"},{"name":"T-cell acute lymphocytic leukaemia","type":"exact"},{"name":"T-cell acute lymphocytic leukemia","type":"exact"},{"name":"T-cell type acute leukaemia","type":"exact"},{"name":"T-cell type acute leukemia","type":"exact"},{"name":"acute T cell leukaemia","type":"broad"},{"name":"acute T cell leukemia","type":"exact"},{"name":"acute T cell lymphoblastic leukaemia","type":"exact"},{"name":"acute T cell lymphoblastic leukemia","type":"exact"},{"name":"acute T cell lymphocytic leukaemia","type":"exact"},{"name":"acute T cell lymphocytic leukemia","type":"exact"},{"name":"acute T-cell leukaemia","type":"exact"},{"name":"acute T-cell leukemia","type":"exact"},{"name":"acute T-cell lymphoblastic leukaemia","type":"exact"},{"name":"acute T-cell lymphoblastic leukemia","type":"exact"},{"name":"acute T-cell lymphocytic leukaemia","type":"exact"},{"name":"acute T-cell lymphocytic leukemia","type":"exact"},{"name":"precursor T lymphoblastic leukaemia","type":"exact"},{"name":"precursor T lymphoblastic leukemia","type":"exact"},{"name":"precursor T-lymphoblastic leukaemia","type":"exact"},{"name":"precursor T-lymphoblastic leukaemia (T-cell ALL)","type":"exact"},{"name":"precursor T-lymphoblastic leukemia","type":"exact"},{"name":"precursor T-lymphoblastic leukemia (T-cell ALL)","type":"exact"}],"termid":"MONDO:0004963","xrefs":{"Monarch":{"xref_id":"0004963"}}}


id: GO:0070209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that is part of the chromatin remodeling machinery; the acronym stands for ASsembly of Tel, Rvb and Atm-like kinase. In Saccharomyces cerevisiae this complex includes Rvb1p, Rvb2p, Tra1p, Tel2p, Asa1p, Ttilp and Tti2p.","definition_xrefs":["PMID:19040720","PMID:22505622","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete ASTRA complex (obsolete GO:0070209)","termid":"GO:0070209"}


id: PBO:0109952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 51 member A","termid":"PBO:0109952"}


id: GO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histamine + L-glutamate + ATP = N(alpha)-gamma-L-glutamylhistamine + products of ATP breakdown.","definition_xrefs":["EC:6.3.2.18","MetaCyc:GAMMA-GLUTAMYLHISTAMINE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"gamma-glutamylhistamine synthase activity","secondary_identifiers":["RHEA:18881"],"synonyms":[{"name":"L-glutamate:histamine ligase activity","type":"related"},{"name":"g-glutamylhistamine synthase activity","type":"exact"},{"name":"gamma-GHA synthetase activity","type":"related"},{"name":"gamma-glutaminylhistamine synthetase activity","type":"related"}],"termid":"GO:0047914"}


id: GO:0030283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + NAD(P)+ = androst-4-ene-3,17-dione + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"testosterone dehydrogenase [NAD(P)+] activity","secondary_identifiers":["Reactome:R-HSA-193064","MetaCyc:1.1.1.51-RXN"],"synonyms":[{"name":"17beta-hydroxy steroid dehydrogenase","type":"broad"},{"name":"3(or 17)beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)beta-hydroxysteroid:NAD(P)+ oxidoreductase","type":"broad"},{"name":"3beta-hydroxy steroid dehydrogenase","type":"broad"},{"name":"3beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"beta-hydroxy steroid dehydrogenase","type":"broad"}],"termid":"GO:0030283"}


id: PBO:0080115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UVRAG divergent transcript","termid":"PBO:0080115"}


id: PBO:0071762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 9","termid":"PBO:0071762"}


id: MONDO:0020663
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm characterized by the presence of atypical spindle cells.","definition_xrefs":["NCIT:C27091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"spindle cell neoplasm","termid":"MONDO:0020664"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant spindle cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:90746","UMLS:C0334230"],"synonyms":[{"name":"malignant spindle cell neoplasm","type":"exact"},{"name":"malignant spindle cell tumor","type":"exact"},{"name":"malignant spindle cell tumour","type":"exact"},{"name":"spindle cell cancer","type":"exact"}],"termid":"MONDO:0020663","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0020663"}}}


id: SO:0000860
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute describing sequence regions occurring in same order on chromosome of different species.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved","termid":"SO:0000856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntenic","secondary_identifiers":["http://en.wikipedia.org/wiki/Syntenic"],"termid":"SO:0000860"}


id: GO:0055045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the antipodal cells undergo programmed cell death.","definition_xrefs":["GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antipodal cell degeneration","termid":"GO:0055045"}


id: PBO:0068681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 62, pseudogene","termid":"PBO:0068681"}


id: FYPO:0001104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of catalase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal catalase activity","termid":"FYPO:0001104"}


id: PBO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,4-alpha-glucosidase (predicted)","termid":"PBO:0002242"}


id: GO:1902045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Fas signaling pathway.","definition_xrefs":["PMID:17245429","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Fas signaling pathway","termid":"GO:1902044"},{"relation_name":"negatively_regulates","term_name":"Fas signaling pathway","termid":"GO:0036337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Fas signaling pathway","synonyms":[{"name":"down regulation of Apo-1 signaling pathway","type":"exact"},{"name":"down regulation of CD95 signaling pathway","type":"exact"},{"name":"down regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"down regulation of Fas receptor signaling pathway","type":"exact"},{"name":"down regulation of Fas signaling pathway","type":"exact"},{"name":"down regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"down regulation of FasL signaling pathway","type":"related"},{"name":"down regulation of FasR signaling pathway","type":"exact"},{"name":"down-regulation of Apo-1 signaling pathway","type":"exact"},{"name":"down-regulation of CD95 signaling pathway","type":"exact"},{"name":"down-regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"down-regulation of Fas receptor signaling pathway","type":"exact"},{"name":"down-regulation of Fas signaling pathway","type":"exact"},{"name":"down-regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"down-regulation of FasL signaling pathway","type":"related"},{"name":"down-regulation of FasR signaling pathway","type":"exact"},{"name":"downregulation of Apo-1 signaling pathway","type":"exact"},{"name":"downregulation of CD95 signaling pathway","type":"exact"},{"name":"downregulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"downregulation of Fas receptor signaling pathway","type":"exact"},{"name":"downregulation of Fas signaling pathway","type":"exact"},{"name":"downregulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"downregulation of FasL signaling pathway","type":"related"},{"name":"downregulation of FasR signaling pathway","type":"exact"},{"name":"inhibition of Apo-1 signaling pathway","type":"narrow"},{"name":"inhibition of CD95 signaling pathway","type":"narrow"},{"name":"inhibition of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"inhibition of Fas receptor signaling pathway","type":"narrow"},{"name":"inhibition of Fas signaling pathway","type":"narrow"},{"name":"inhibition of Fas-FasL signaling pathway","type":"narrow"},{"name":"inhibition of FasL signaling pathway","type":"related"},{"name":"inhibition of FasR signaling pathway","type":"narrow"},{"name":"negative regulation of Apo-1 signaling pathway","type":"exact"},{"name":"negative regulation of CD95 signaling pathway","type":"exact"},{"name":"negative regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"negative regulation of Fas receptor signaling pathway","type":"exact"},{"name":"negative regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"negative regulation of FasL signaling pathway","type":"related"},{"name":"negative regulation of FasR signaling pathway","type":"exact"}],"termid":"GO:1902045"}


id: GO:0033102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an acidocalcisome.","definition_xrefs":["GOC:ecd","PMID:11378195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"acidocalcisome","termid":"GO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"acidocalcisome membrane","termid":"GO:0033102"}


id: PBO:0060645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4 pseudogene 4","termid":"PBO:0060645"}


id: GO:0051563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum calcium ion homeostasis","termid":"GO:0032469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"smooth endoplasmic reticulum calcium ion homeostasis","synonyms":[{"name":"calcium ion homeostasis in smooth ER","type":"exact"},{"name":"calcium ion homeostasis in smooth endoplasmic reticulum","type":"exact"},{"name":"regulation of calcium ion concentration in smooth ER","type":"exact"},{"name":"regulation of calcium ion concentration in smooth endoplasmic reticulum","type":"exact"},{"name":"regulation of smooth ER calcium ion concentration","type":"exact"},{"name":"regulation of smooth endoplasmic reticulum calcium ion concentration","type":"exact"},{"name":"smooth ER calcium ion concentration regulation","type":"exact"},{"name":"smooth ER calcium ion homeostasis","type":"exact"},{"name":"smooth endoplasmic reticulum calcium ion concentration regulation","type":"exact"}],"termid":"GO:0051563"}


id: GO:0016802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a thioether bond, -S-.","definition_xrefs":["EC:3.3.1.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ether bonds","termid":"GO:0016801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trialkylsulfonium hydrolase activity","synonyms":[{"name":"thioether hydrolase activity","type":"exact"},{"name":"trialkylsulphonium hydrolase activity","type":"exact"}],"termid":"GO:0016802"}


id: PBO:0060139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA translation optimization 1","termid":"PBO:0060139"}


id: GO:0097648
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"A protein complex that contains G protein-coupled receptors.","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"G protein-coupled receptor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled receptor complex","type":"exact"}],"termid":"GO:0097648","terms_by_termid":{"GO:0038038":null}}


id: PBO:0011492
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tagging Tra1 at its C-terminus is as detrimental as deletion","termid":"PBO:0011492"}


id: GO:0021969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after exiting the internal capsule through the cerebral peduncle in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:9878731","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the cerebral peduncle","synonyms":[{"name":"corticospinal neuron axon pathfinding through the cerebral peduncle","type":"exact"}],"termid":"GO:0021969"}


id: MONDO:1011091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypospadias that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias, non-human animal","termid":"MONDO:1010269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias, dog","secondary_identifiers":["OMIA:001187-9615"],"termid":"MONDO:1011091","xrefs":{"Monarch":{"xref_id":"1011091"}}}


id: PATO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being curled or wound (especially in concentric rings or spirals).","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coiling","termid":"PATO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled","secondary_identifiers":["PATO:0001363"],"synonyms":[{"name":"helical","type":"related"},{"name":"helicoid","type":"related"},{"name":"helicoidal","type":"related"},{"name":"helix-shaped","type":"related"},{"name":"spiral","type":"exact"}],"termid":"PATO:0000404"}


id: MONDO:0010141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiglic acidemia","secondary_identifiers":["ICD9:270.8","SCTID:444755001","OMIM:275190","MEDGEN:376443","MESH:C536921","UMLS:C1848793"],"synonyms":[{"name":"disorder of isoleucine metabolism","type":"related"},{"name":"tiglic acidemia","type":"exact"}],"termid":"MONDO:0010141","xrefs":{"Monarch":{"xref_id":"0010141"}}}


id: PBO:0069375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 635, pseudogene","termid":"PBO:0069375"}


id: FYPO:0007479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the assembly and stable inheritance of heterochromatic structure is normal (i.e. indistinguishable from wild type) in regions of the genome where heterochromatin is normally maintained over successive generations.","definition_xrefs":["PMID:31278118","PMID:29899117","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"normal epigenetic heterochromatin inheritance","synonyms":[{"name":"normal PEV","type":"related"},{"name":"normal epigenetic heterochromatin propagation","type":"exact"},{"name":"normal epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007479"}


id: PBO:0074523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA B1","termid":"PBO:0074523"}


id: PBO:0064138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 5","termid":"PBO:0064138"}


id: FYPO:0005212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during prometaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during mitosis","termid":"FYPO:0005779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic prometaphase","synonyms":[{"name":"normal protein localisation to kinetochore during mitotic prometaphase","type":"exact"},{"name":"normal protein localization to kinetochore during prometaphase of mitosis","type":"exact"}],"termid":"FYPO:0005212"}


id: PBO:0046624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 5","termid":"PBO:0046624"}


id: GO:0016318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which photoreceptors are arranged in ommatidia in the dorsal and ventral fields to be mirror images. The polarity is established in the imaginal discs concurrently with cell fate specification.","definition_xrefs":["PMID:10725247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"establishment of ommatidial planar polarity","termid":"GO:0042067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"ommatidial rotation","termid":"GO:0016318"}


id: FYPO:0006583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is decreased during interphase of the mitotic cell cycle. The nuclear periphery is the portion of the nuclear lumen proximal to the inner nuclear membrane.","definition_xrefs":["GO:0034399","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nuclear periphery","termid":"FYPO:0002339"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during mitotic interphase","termid":"FYPO:0006642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nuclear periphery during mitotic interphase","synonyms":[{"name":"decreased protein localisation to nuclear periphery during mitotic interphase","type":"exact"},{"name":"decreased protein localization to nuclear periphery during interphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to nuclear periphery during interphase of mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to nuclear periphery during mitotic interphase","type":"exact"}],"termid":"FYPO:0006583"}


id: PBO:0040909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 13","termid":"PBO:0040909"}


id: MOD:00808
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-galactosylserine.","definition_xrefs":["PubMed:666730","RESID:AA0400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"galactosylated residue","termid":"MOD:00476"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-galactosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Gal) serine","type":"exact"},{"name":"CARBOHYD O-linked (Hex)","type":"exact"},{"name":"O-galactosyl-L-serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O3-galactosylserine","type":"exact"},{"name":"OGalSer","type":"exact"}],"termid":"MOD:00808"}


id: GO:0033862
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114715],"is_not":false,"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UMP = ADP + UDP.","definition_xrefs":["EC:2.7.4.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP/dUMP kinase activity","termid":"GO:0009041"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"UMP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.7.4.22-RXN","RHEA:24400"],"synonyms":[{"name":"ATP:UMP phosphotransferase activity","type":"related"},{"name":"PyrH","type":"related"},{"name":"SmbA","type":"related"},{"name":"UMP-kinase activity","type":"related"},{"name":"UMPK","type":"related"},{"name":"uridine monophosphate kinase activity","type":"related"}],"termid":"GO:0033862","terms_by_termid":{"GO:0033862":null}}


id: PBO:0029173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_peptide-glutamate-N-acetyltransferase_activity","termid":"PBO:0029173"}


id: GO:0051365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of potassium ions.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to potassium ion starvation","synonyms":[{"name":"cellular response to K+ ion deprivation","type":"exact"},{"name":"cellular response to K+ ion starvation","type":"exact"},{"name":"cellular response to potassium ion deprivation","type":"exact"},{"name":"cellular response to potassium starvation","type":"exact"}],"termid":"GO:0051365"}


id: PBO:0041915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellin 3 precursor","termid":"PBO:0041915"}


id: PBO:0086933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles","termid":"PBO:0086933"}


id: FYPO:0009084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of lithium chloride and methyl methanesulfonate. Cells stop growing (and may die) at concentrations of lithium chloride and methyl methanesulfonate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to lithium chloride and methyl methanesulfonate","synonyms":[{"name":"hypersensitive to lithium chloride and MMS","type":"exact"},{"name":"hypersensitive to lithium chloride and methyl methanesulfonate","type":"exact"},{"name":"sensitive to lithium chloride and MMS","type":"exact"},{"name":"sensitive to lithium chloride and MMS during vegetative growth","type":"exact"},{"name":"sensitive to lithium chloride and MMS in combination","type":"exact"},{"name":"sensitive to lithium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to lithium chloride and methyl methanesulfonate in combination","type":"exact"}],"termid":"FYPO:0009084"}


id: PBO:0084338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore localized protein of unknown function; interacts with Cnn1p (CENP-T); orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-W and fission yeast new1","termid":"PBO:0084338"}


id: FYPO:0006623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in the plasma membrane is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatidylinositol phosphate level in plasma membrane","termid":"FYPO:0006222"},{"relation_name":"is_a","term_name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","termid":"FYPO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane","synonyms":[{"name":"decreased 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level in plasma membrane","type":"exact"},{"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in cell membrane","type":"exact"},{"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"decreased plasma membrane PI(3,4,5)P3 level","type":"exact"},{"name":"decreased plasma membrane phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"},{"name":"reduced phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane","type":"exact"}],"termid":"FYPO:0006623"}


id: GO:0016606
data:
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id: GO:0016132
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id: GO:1900956
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id: GO:0031982
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id: MONDO:0006727
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id: FYPO:0008050
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id: PBO:0111944
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id: GO:1904258
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id: PBO:0044279
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id: GO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of DNA, involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of deoxyribonucleotides.","definition_xrefs":["GOC:elh","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA catabolic process, exonucleolytic (obsolete GO:0000738)","synonyms":[{"name":"DNA breakdown, exonucleolytic","type":"exact"},{"name":"DNA degradation, exonucleolytic","type":"exact"},{"name":"exonucleolytic degradation of DNA","type":"exact"}],"termid":"GO:0000738"}


id: MONDO:0016603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Citrullinemia type II is a severe subtype of citrin deficiency characterized clinically by adult onset (20 and 50 years of age), recurrent episodes of hyperammonemia and associated neuropsychiatric symptoms such as nocturnal delirium, confusion, restlessness, disorientation, drowsiness, memory loss, abnormal behavior (aggression, irritability, and hyperactivity), seizures, and coma.","definition_xrefs":["Orphanet:247585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrin deficiency","termid":"MONDO:0016602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"citrullinemia type II","secondary_identifiers":["NANDO:1200980","SCTID:716863007","NCIT:C150603","UMLS:C1863844","GARD:10215","MEDGEN:350276"],"synonyms":[{"name":"CTLN2","type":"exact"},{"name":"adult-onset citrin deficiency","type":"exact"},{"name":"adult-onset type 2 citrullinemia","type":"exact"},{"name":"adult-onset type II citrullinemia","type":"exact"},{"name":"citrullinemia type 2","type":"exact"},{"name":"citrullinemia type II","type":"exact"}],"termid":"MONDO:0016603","xrefs":{"Monarch":{"xref_id":"0016603"}}}


id: PBO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Nnk1 (predicted)","termid":"PBO:0017096"}


id: PBO:0090427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec5","termid":"PBO:0090427"}


id: PR:O59746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C530.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.11c","synonyms":[{"name":"Spom972h-SPBC530.11c","type":"exact"}],"termid":"PR:O59746"}


id: PBO:0073034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretin receptor","termid":"PBO:0073034"}


id: GO:0048361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epithelial mucilage metabolic process","synonyms":[{"name":"root epithelial mucilage metabolism","type":"exact"}],"termid":"GO:0048361"}


id: PBO:0050412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 1","termid":"PBO:0050412"}


id: PBO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein, HSR1-related (predicted)","termid":"PBO:0001769"}


id: GO:1902319
data:
  {"annotated_genes":["SJAG_00729","SJAG_05197","SJAG_04879","SJAG_03495","SJAG_04190","SJAG_02818","SJAG_04877","SJAG_00272","SJAG_00874","SJAG_01823","SJAG_02908","SJAG_02182","SJAG_02667","SJAG_01010","SJAG_00863","SJAG_03780","SJAG_00814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88782,93158,102006,104093,108259,94429,111411,112288,94463,112698,111651,114541,106141,106507,103399,109098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[103403,94431,102008,104095,108261,117309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[93160,104096,88783,103404,94432,94464,106509,106142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in cell cycle DNA replication","termid":"GO:1902296"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_01010":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA strand elongation involved in nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA strand elongation involved in DNA replication during S phase","type":"related"},{"name":"DNA strand elongation involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA strand elongation involved in DNA replication involved in S-phase","type":"exact"}],"termid":"GO:1902319","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: PBO:0108552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 associated factor 1 Laf1","termid":"PBO:0108552"}


id: PBO:0081630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF559-ZNF177 readthrough","termid":"PBO:0081630"}


id: GO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal octapeptide as second stage of processing of some proteins imported in the mitochondrion.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial intermediate peptidase activity (obsolete GO:0004243)","synonyms":[{"name":"MIP","type":"broad"},{"name":"mitochondrial intermediate peptidase activity","type":"exact"},{"name":"mitochondrial intermediate precursor-processing proteinase activity","type":"related"}],"termid":"GO:0004243"}


id: PBO:0031413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_vegetative_cell","termid":"PBO:0031413"}


id: SO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Crypton is a superfamily of DNA transposons that use tyrosine recombinase (YR) to cut and rejoin the recombining DNA molecules.","definition_xrefs":["PMID:22011512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crypton_YR_transposon","synonyms":[{"name":"Crypton YR transposon","type":"exact"},{"name":"Crypton transposon","type":"exact"},{"name":"DYC transposon","type":"exact"}],"termid":"SO:0002277"}


id: PBO:0030077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histidine_import","termid":"PBO:0030077"}


id: MONDO:0017637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare parkinsonian syndrome due to intoxication (obsolete MONDO:0017637)","secondary_identifiers":["Orphanet:306679"],"termid":"MONDO:0017637","xrefs":{"Monarch":{"xref_id":"0017637"}}}


id: PBO:0086728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene; YPL216W has a paralog, ITC1, that arose from the whole genome duplication","termid":"PBO:0086728"}


id: GO:0010707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of globosides that begins with the formation of lactosylceramides, Gal-beta-(1->4)-Glc-beta-(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group.","definition_xrefs":["GOC:dph","GOC:bf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"globoside biosynthetic process","termid":"GO:0001576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"globoside biosynthetic process via lactosylceramide","synonyms":[{"name":"biosynthesis of lactosylceramide precursor to globoside","type":"related"},{"name":"globoside biosynthesis via lactosylceramide biosynthesis","type":"exact"},{"name":"lactosylceramide biosynthesis leading to globoside","type":"related"},{"name":"lactosylceramide biosynthetic process leading to globoside","type":"related"}],"termid":"GO:0010707"}


id: PBO:0043191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2","termid":"PBO:0043191"}


id: GO:0032829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043370"},{"relation_name":"is_a","term_name":"regulation of regulatory T cell differentiation","termid":"GO:0045589"},{"relation_name":"regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","synonyms":[{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development","type":"related"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation","type":"exact"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0032829"}


id: PBO:0113299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in aromatic amino acid biosynthesis; up-regulated following GCN4 induction, amino acid starvation, rapamycin treatment in GCN4-dependent manner; promoter contains Gcn4 control response element, which is bound by Gcn4p in vivo","termid":"PBO:0113299"}


id: PR:Q09878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase [NADPH] flavoprotein component (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.01c","synonyms":[{"name":"Spom972h-SPCC584.01c","type":"exact"}],"termid":"PR:Q09878"}


id: GO:0006199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP reduction (obsolete GO:0006199)","synonyms":[{"name":"ADP reduction","type":"exact"}],"termid":"GO:0006199"}


id: MONDO:0003732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system mature teratoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult central nervous system teratoma","termid":"MONDO:0003731"},{"relation_name":"is_a","term_name":"central nervous system mature teratoma","termid":"MONDO:0003733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult central nervous system mature teratoma","secondary_identifiers":["DOID:6016","MEDGEN:231037","NCIT:C27400","UMLS:C1332194"],"synonyms":[{"name":"adult central nervous system mature teratoma","type":"exact"},{"name":"central nervous system mature teratoma of adults","type":"exact"}],"termid":"MONDO:0003732","xrefs":{"Monarch":{"xref_id":"0003732"}}}


id: PBO:0036472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Sog2","termid":"PBO:0036472"}


id: GO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of tolerance induction which leads to immunological tolerance of a tumor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response to tumor cell","termid":"GO:0002418"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction to tumor cell","termid":"GO:0002413"}


id: PBO:0081686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 607","termid":"PBO:0081686"}


id: GO:0033806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine + fluoroacetaldehyde = acetaldehyde + 4-fluoro-L-threonine.","definition_xrefs":["RHEA:11748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016744","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"fluorothreonine transaldolase activity","secondary_identifiers":["EC:2.2.1.8"],"synonyms":[{"name":"fluoroacetaldehyde:L-threonine aldehydetransferase activity","type":"related"}],"termid":"GO:0033806"}


id: PBO:0030239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_basal_transcription_from_CDRE_promoter_(obsolete_FYPO:0001459)","termid":"PBO:0030239"}


id: MONDO:0018664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital anomaly where the heart is formed outside of the thoracic cavity. It is associated with intracardiac lesions and other structural malformations.","definition_xrefs":["NCIT:C111643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopia cordis","secondary_identifiers":["SCTID:78250005","ICD9:746.87","UMLS:C0013580","HP:0001683","GARD:21877","MEDGEN:41703","MESH:D054083","Orphanet:448270","icd11.foundation:285576893"],"synonyms":[{"name":"ectopia cordis","type":"exact"},{"name":"ectopia cordis (disease)","type":"exact"}],"termid":"MONDO:0018664","xrefs":{"Monarch":{"xref_id":"0018664"}}}


id: GO:0016321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a female.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"female meiosis chromosome segregation","termid":"GO:0016321"}


id: PBO:0046516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum lectin 1 pseudogene 1","termid":"PBO:0046516"}


id: PBO:0089407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, membrane-tethered","termid":"PBO:0089407"}


id: PBO:0003523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide pyrophosphatase (predicted)","termid":"PBO:0003523"}


id: PBO:0001783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (predicted)","termid":"PBO:0001783"}


id: PBO:0071975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 3","termid":"PBO:0071975"}


id: PBO:0077200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 18","termid":"PBO:0077200"}


id: GO:0005625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete soluble fraction (obsolete GO:0005625)","synonyms":[{"name":"soluble","type":"broad"},{"name":"soluble fraction","type":"exact"}],"termid":"GO:0005625"}


id: PBO:0056942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9-2","termid":"PBO:0056942"}


id: MONDO:0003105
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86539,86538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A disease involving the prostate gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"is_obsolete":false,"name":"prostate disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0009602","SCTID:30281009","MEDGEN:10964","ICD9:602.8","ICD9:602.9","MESH:D011469","DOID:47","UMLS:C0033575","NCIT:C26865"],"synonyms":[{"name":"disease of prostate gland","type":"exact"},{"name":"disease or disorder of prostate gland","type":"exact"},{"name":"disorder of prostate gland","type":"exact"},{"name":"prostate disease","type":"exact"},{"name":"prostate disorder","type":"exact"},{"name":"prostate gland disease","type":"exact"},{"name":"prostate gland disease or disorder","type":"exact"}],"termid":"MONDO:0003105","terms_by_termid":{"MONDO:0013872":null},"xrefs":{"Monarch":{"xref_id":"0003105"}}}


id: GO:0048437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the floral organ over time, from its formation to the mature structure.","definition_xrefs":["GOC:PO_curators","GOC:go_curators","PO:0025395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ development","secondary_identifiers":["GO:0048433"],"termid":"GO:0048437"}


id: PBO:0081788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 716","termid":"PBO:0081788"}


id: PBO:0039389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha pseudogene 1","termid":"PBO:0039389"}


id: PBO:0063842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase alpha pseudogene 1","termid":"PBO:0063842"}


id: PBO:0079324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 13B","termid":"PBO:0079324"}


id: PBO:0062939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P4HA3 antisense RNA 1","termid":"PBO:0062939"}


id: PR:000050492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A division mal foutue 1 protein (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-110, Ser-127, Ser-218, Ser-227, Ser-329, Ser-432, Ser-452, Ser-464, and Ser-531 of the amino acid sequence represented by UniProtKB:P78953. Example: UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:30853434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division mal foutue 1 protein (Schizosaccharomyces pombe)","termid":"PR:000050491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mid1/Phos","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"PomBase_original_PRO_term_name: division mal foutue 1 protein phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mid1/Phos:1","type":"exact"},{"name":"UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, MOD:00046","type":"narrow"},{"name":"mid1/Phos","type":"exact"},{"name":"mid1/Phos:(S110,S127,S218,S227,S329,S432,S452,S464,S531)","type":"exact"}],"termid":"PR:000050492"}


id: PBO:0076350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYT15 antisense RNA 1","termid":"PBO:0076350"}


id: MONDO:0012123
data:
  {"annotated_genes":["SJAG_02903"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85655],"is_not":false,"summary":null,"term":"MONDO:0012123"}]},"cv_name":"mondo","definition":"The CDG (Congenital Disorders of Glycosylation) syndromes are a group of autosomal recessive disorders affecting glycoprotein synthesis. CDG syndrome type Ie is characterized by psychomotor delay, seizures, hypotonia, facial dysmorphism and microcephaly. Ocular anomalies are also very common.","definition_xrefs":["Orphanet:79322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation type 1E","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:608799","MEDGEN:324784","GARD:9831","MESH:C535743","UMLS:C1837396","DOID:0080557","NCIT:C126871","SCTID:725078006"],"synonyms":[{"name":"CDG 1E","type":"related"},{"name":"CDG Ie","type":"related"},{"name":"CDG syndrome type Ie","type":"exact"},{"name":"CDG-Ie","type":"exact"},{"name":"CDG1E","type":"exact"},{"name":"CDGIe","type":"exact"},{"name":"DPM1 congenital disorder of glycosylation","type":"exact"},{"name":"DPM1-CDG","type":"related"},{"name":"DPM1-CDG (CDG-Ie)","type":"related"},{"name":"Dol-P-mannosyltransferase deficiency","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ie","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1E","type":"related"},{"name":"congenital disorder of glycosylation caused by mutation in DPM1","type":"exact"},{"name":"congenital disorder of glycosylation type 1E","type":"exact"},{"name":"congenital disorder of glycosylation type 1e","type":"exact"},{"name":"congenital disorder of glycosylation type Ie","type":"exact"},{"name":"congenital disorder of glycosylation, type Ie","type":"related"}],"termid":"MONDO:0012123","terms_by_termid":{"MONDO:0012123":null},"xrefs":{"Monarch":{"xref_id":"0012123"}}}


id: PBO:0064845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R13B divergent transcript","termid":"PBO:0064845"}


id: PBO:0067343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 440, pseudogene","termid":"PBO:0067343"}


id: PBO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erp2/3/4 (predicted)","termid":"PBO:0001169"}


id: PBO:0052665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 33","termid":"PBO:0052665"}


id: PBO:0003572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U14","termid":"PBO:0003572"}


id: FYPO:0000695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"},{"relation_name":"is_a","term_name":"increased DNA N-glycosylase activity","termid":"FYPO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000695"}


id: GO:2000040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in axis elongation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in axis elongation (obsolete GO:2000040)","termid":"GO:2000040"}


id: MONDO:0024893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"toxocariasis","termid":"MONDO:0005988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxocara canis infection (canine roundworms)","secondary_identifiers":["MESH:C531834","UMLS:C2930846","MEDGEN:419650"],"synonyms":[{"name":"Human infection with the larvae of canine or feline roundworms","type":"related"},{"name":"Toxocara catis infection (feline roundworms)","type":"related"}],"termid":"MONDO:0024893","xrefs":{"Monarch":{"xref_id":"0024893"}}}


id: PBO:0041400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 52","termid":"PBO:0041400"}


id: PBO:0113237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic epsilon subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes asparagine-linked glycosylation of newly synthesized proteins in the ER; forms a pocket with Wbp1p involved in binding terminal glucose units of the donor glycan; located in the ER lumen","termid":"PBO:0113237"}


id: PBO:0086433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein; member of DUP240 gene family; SWAT-GFP and mCherry fusion proteins localize to the cell periphery and vacuole; YCR007C is not an essential gene","termid":"PBO:0086433"}


id: MONDO:0010445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete McLeod syndrome (obsolete MONDO:0010445)","termid":"MONDO:0010445","xrefs":{"Monarch":{"xref_id":"0010445"}}}


id: GO:1900758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of D-amino-acid oxidase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of D-amino-acid oxidase activity (obsolete GO:1900758)","synonyms":[{"name":"down regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"down regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"down regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"down regulation of new yellow enzyme","type":"related"},{"name":"down-regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"down-regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"down-regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"down-regulation of new yellow enzyme","type":"related"},{"name":"downregulation of D-amino-acid oxidase activity","type":"exact"},{"name":"downregulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"downregulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"downregulation of new yellow enzyme","type":"related"},{"name":"inhibition of D-amino-acid oxidase activity","type":"narrow"},{"name":"inhibition of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"inhibition of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"inhibition of new yellow enzyme","type":"related"},{"name":"negative regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"negative regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"negative regulation of new yellow enzyme","type":"related"}],"termid":"GO:1900758"}


id: PBO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor","termid":"PBO:0001797"}


id: MONDO:0018081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemorrhagic fever with renal syndrome (HFRS) is a rodent-borne potentially severe hemorrhagic disease caused by Old World Hantaviruses characterized by high fever, malaise, headache, myalgia, arthralgia, backache, abdominal pain, oliguria/renal failure and systemic hemorrhagic manifestations.","definition_xrefs":["Orphanet:340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemorrhagic fever-renal syndrome","secondary_identifiers":["MEDGEN:42408","icd11.foundation:1059069619","ICD10EXP:N08.0*","ICD10EXP:A98.5+","GARD:18689","MedDRA:10023484","MESH:C535630","UMLS:C0019101"],"synonyms":[{"name":"Hantavirosis","type":"exact"},{"name":"Hantavirus fever","type":"exact"}],"termid":"MONDO:0018081","xrefs":{"Monarch":{"xref_id":"0018081"}}}


id: PBO:0059441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A12","termid":"PBO:0059441"}


id: PBO:0085777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein needed for ER membrane biosynthesis in response to ER stress; member of the highly conserved FIT family of proteins involved in triglyceride droplet biosynthesis; homologous to human FIT2/FITM2, a fatty acyl-CoA diphosphatase; interacts with Sst2p and Hsp82p in high-throughput two-hybrid screens","termid":"PBO:0085777"}


id: PBO:0004010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin ortholog Bhd1","termid":"PBO:0004010"}


id: MONDO:0018820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome is a rare, genetic, neurodegenerative disease characterized by episodic metabolic encephalomyopathic crises (of variable frequency and severity which are frequently precipitated by an acute illness) which manifest with profound muscle weakness, ataxia, seizures, cardiac arrhythmias, rhabdomyolysis with myoglobinuria, elevated plasma creatine kinase, hypoglycemia, lactic acidosis, increased acylcarnitines and a disorientated or comatose state. Global developmental delay, intellectual disability and cortical, pyramidal and cerebellar signs develop with subsequent progressive neurodegeneration causing loss of expressive language and varying degrees of cerebral atrophy.","definition_xrefs":["Orphanet:480864"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome","secondary_identifiers":["NORD:1944","MEDGEN:1798947","DOID:0081386","GARD:13423","OMIM:616878","UMLS:C5567524"],"synonyms":[{"name":"MECRCN","type":"exact"},{"name":"TANGO2 Deficiency Disorder","type":"exact"},{"name":"TANGO2 deficiency","type":"exact"},{"name":"metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration","type":"exact"},{"name":"transport and golgi organisation protein 2 (TANGO2) deficiency","type":"exact"},{"name":"transport and golgi organization protein 2 (TANGO2) deficiency","type":"exact"}],"termid":"MONDO:0018820","xrefs":{"Monarch":{"xref_id":"0018820"}}}


id: GO:0009777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any metabolic process in which photosynthetic organisms use light energy to convert ADP to ATP without the concomitant reduction of dioxygen (O2) to water that occurs in phosphorylation.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthetic phosphorylation","synonyms":[{"name":"photosynthetic ATP synthesis","type":"narrow"}],"termid":"GO:0009777"}


id: PBO:0114062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Roadblock/LC7 domain superfamily protein Mug15","termid":"PBO:0114062"}


id: PBO:0029980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_trifluoperazine","termid":"PBO:0029980"}


id: CHEBI:32130
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silver(1+) nitrate","termid":"CHEBI:32130"}


id: PBO:0027764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_prospore_membrane_during_meiosis_II","termid":"PBO:0027764"}


id: PBO:0071190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 31","termid":"PBO:0071190"}


id: GO:0045158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of electrons within the cytochrome b6/f complex of photosystem II.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity","synonyms":[{"name":"cytochrome","type":"related"},{"name":"cytochrome b/b6","type":"related"},{"name":"cytochrome b6","type":"narrow"},{"name":"cytochrome f","type":"narrow"}],"termid":"GO:0045158"}


id: PBO:0075777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 6","termid":"PBO:0075777"}


id: MONDO:0019825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital coronary artery aneurysm is a rare congenital coronary artery malformation defined as a more than 1.5 fold the normal size dilatation of a coronary artery segment with no identified underlying inflammatory or connective tissue disease. It may be asymptomatic or may present with angina pectoris, myocardial infarction, sudden cardiac death, fistula formation, pericardial tamponade, compression of surrounding structures, or congestive heart failure.","definition_xrefs":["Orphanet:95491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital coronary artery aneurysm","secondary_identifiers":["GARD:19273","MEDGEN:573848","SCTID:204378009","UMLS:C0340627"],"synonyms":[{"name":"congenital coronary aneurysm","type":"exact"}],"termid":"MONDO:0019825","xrefs":{"Monarch":{"xref_id":"0019825"}}}


id: PBO:0088362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(37)-N(1))-methyltransferase activity Trm5","termid":"PBO:0088362"}


id: RO:0003306
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity influences the frequency of the condition in a population.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_condition","termid":"RO:0003304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_frequency_of_condition","termid":"RO:0003306"}


id: PBO:0090764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome homolog binding protein Lsb1","termid":"PBO:0090764"}


id: PBO:0055385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2815","termid":"PBO:0055385"}


id: PBO:0060103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 4","termid":"PBO:0060103"}


id: PBO:0052640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 8","termid":"PBO:0052640"}


id: GO:1900517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xylose catabolic process to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of xylose catabolic process to ethanol","termid":"GO:1900515"},{"relation_name":"positively_regulates","term_name":"D-xylose catabolic process to ethanol","termid":"GO:0044577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xylose catabolic process to ethanol","synonyms":[{"name":"activation of xylose catabolic process to ethanol","type":"narrow"},{"name":"activation of xylose catabolism to ethanol","type":"exact"},{"name":"positive regulation of xylose catabolism to ethanol","type":"exact"},{"name":"up regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"up regulation of xylose catabolism to ethanol","type":"exact"},{"name":"up-regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"up-regulation of xylose catabolism to ethanol","type":"exact"},{"name":"upregulation of xylose catabolic process to ethanol","type":"exact"},{"name":"upregulation of xylose catabolism to ethanol","type":"exact"}],"termid":"GO:1900517"}


id: PATO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to detect or perceive external stimulation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity toward","synonyms":[{"name":"sensitivity","type":"exact"}],"termid":"PATO:0000085"}


id: PBO:0074173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 36 member 4","termid":"PBO:0074173"}


id: PR:Q8NIL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NIL4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.05","synonyms":[{"name":"Spom972h-SPBPB21E7.05","type":"exact"}],"termid":"PR:Q8NIL4"}


id: MONDO:0005608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly contagious viral infection caused by the varicella zoster virus. Clinically, it may be manifested as shingles or chicken pox.","definition_xrefs":["NCIT:C96407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"varicella zoster infection","secondary_identifiers":["ICD9:052.7","EFO:0006509","UMLS:C0586989","SCTID:309465005","MEDGEN:668886"],"synonyms":[{"name":"Varicella-zoster Virus infection","type":"exact"},{"name":"varicella zoster infection","type":"exact"}],"termid":"MONDO:0005608","xrefs":{"Monarch":{"xref_id":"0005608"}}}


id: PBO:0075732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 divergent transcript","termid":"PBO:0075732"}


id: GO:2000763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in norepinephrine biosynthetic process.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process (obsolete GO:2000763)","synonyms":[{"name":"positive regulation of transcription from Pol II promoter involved in levarterenol biosynthesis","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in levarterenol biosynthetic process","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in noradrenaline biosynthesis","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in noradrenaline biosynthetic process","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine anabolism","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine biosynthesis","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine biosynthetic process","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine formation","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine synthesis","type":"exact"}],"termid":"GO:2000763"}


id: MONDO:0859231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocephaly, neurodevelopmental delay, lymphoid hyperplasia, and persistent fetal hemoglobin","secondary_identifiers":["MEDGEN:1802903","UMLS:C5676928","OMIM:619769"],"termid":"MONDO:0859231","xrefs":{"Monarch":{"xref_id":"0859231"}}}


id: MONDO:0008477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylometaphyseal dysplasia, Kozlowski type is characterized by short stature (short-trunk dwarfism), scoliosis, metaphyseal abnormalities in the femur (prominent in the femoral neck and trochanteric area), coxa vara and generalized platyspondyly.","definition_xrefs":["Orphanet:93314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"},{"relation_name":"is_a","term_name":"TRPV4-related bone disorder","termid":"MONDO:0018240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, Kozlowski type","secondary_identifiers":["icd11.foundation:360868302","OMIM:184252","DOID:0111554","MESH:C535797","GARD:3047","MEDGEN:82698","UMLS:C0265280"],"synonyms":[{"name":"Dysmorphism arthrogryposis skeletal maturation advanced","type":"related"},{"name":"Jequier Kozlowski skeletal dysplasia","type":"related"},{"name":"Jequier-Kozlowski syndrome","type":"related"},{"name":"SMDK","type":"related"},{"name":"SmD Kozlowski type","type":"related"},{"name":"SmD, Kozlowski type","type":"related"},{"name":"skeletal dysplasia Jequier-Kozlowski type","type":"related"},{"name":"spondylometaphyseal dysplasia, Kozlowski type","type":"exact"}],"termid":"MONDO:0008477","xrefs":{"Monarch":{"xref_id":"0008477"}}}


id: PBO:0064643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic progenitor cell differentiation and proliferation factor like","termid":"PBO:0064643"}


id: GO:0031142
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114719],"is_not":false,"summary":null,"term":"GO:0031142"}]},"cv_name":"biological_process","definition":"The process in which a cell initiates conjugation with cellular fusion upon nitrogen starvation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"},{"relation_name":"is_a","term_name":"induction of conjugation upon nutrient starvation","termid":"GO:0031140"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"induction of conjugation upon nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031142","terms_by_termid":{"GO:0031142":null}}


id: PBO:0034253
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_parallelism_relationship_with","termid":"PBO:0034253"}


id: GO:1901760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-L-Ara4N-lipid A which occurs as a result of modification of the lipid A moiety of lipopolysaccharide by the addition of the sugar 4-amino-4-deoxy-L-arabinose (L-Ara4N). This strategy is adopted by pathogenic Gram-negative bacteria to evade cationic antimicrobial peptides produced by the innate immune system.","definition_xrefs":["GOC:yaf","UniPathway:UPA00037","PMID:17928292","PMID:19166326","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"lipooligosaccharide biosynthetic process","termid":"GO:1901271"},{"relation_name":"is_a","term_name":"beta-L-Ara4N-lipid A metabolic process","termid":"GO:1901759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-L-Ara4N-lipid A biosynthetic process","synonyms":[{"name":"4-amino-4-deoxy-beta-L-arabinose-lipid A biosynthesis","type":"exact"},{"name":"4-amino-4-deoxy-beta-L-arabinose-lipid A biosynthetic process","type":"exact"},{"name":"beta-L-Ara4N-lipid A anabolism","type":"exact"},{"name":"beta-L-Ara4N-lipid A biosynthesis","type":"exact"},{"name":"beta-L-Ara4N-lipid A formation","type":"exact"},{"name":"beta-L-Ara4N-lipid A synthesis","type":"exact"}],"termid":"GO:1901760"}


id: PBO:0005384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chk1 protein kinase","termid":"PBO:0005384"}


id: MOD:00122
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tyrosine residue by a thioether bond to form 2-(S-L-cysteinyl)-L-tyrosine.","definition_xrefs":["PubMed:2002850","RESID:AA0113","PubMed:15917234","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"3'-(S-L-cysteinyl)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(3-[(2R)2-amino-2-carboxyethylsulfanyl]-4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"2-amino-3-[3-(2-amino-2-carboxyethylthio)-4-hydroxyphenyl]propanoic acid","type":"exact"},{"name":"3'-(L-cystein-S-yl)-L-tyrosine","type":"exact"},{"name":"3'-(cystein-S-yl)tyrosine","type":"exact"},{"name":"CROSSLNK 3'-(S-cysteinyl)-tyrosine (Cys-Tyr)","type":"exact"},{"name":"CROSSLNK 3'-(S-cysteinyl)-tyrosine (Tyr-Cys)","type":"exact"},{"name":"S-(3-Tyr) (Crosslinked to Cysteine)","type":"exact"},{"name":"S-(tyros-3'-yl)cysteine","type":"exact"},{"name":"XLNK-SCys-3'Tyr","type":"exact"}],"termid":"MOD:00122"}


id: PR:P79016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1902 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.02","synonyms":[{"name":"S16-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps1902","type":"exact"}],"termid":"PR:P79016"}


id: GO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-serine and peptidyl-cysteine by the synthesis of (2R,6R)-lanthionine (L-lanthionine).","definition_xrefs":["RESID:AA0110"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via (2R,6R)-lanthionine (obsolete GO:0018154)","termid":"GO:0018154"}


id: MONDO:0008373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"COL4A1-related disorder","termid":"MONDO:0800461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal arterial tortuosity","secondary_identifiers":["MEDGEN:140840","Orphanet:75326","UMLS:C0423401","DOID:0111547","HP:0001136","GARD:16693","OMIM:180000"],"synonyms":[{"name":"RATOR","type":"related"},{"name":"retinal arterial tortuosity","type":"exact"},{"name":"retinal arterial tortuosity (disease)","type":"exact"},{"name":"retinal arteries, tortuosity OF","type":"related"},{"name":"retinal arteriolar tortuosity","type":"exact"},{"name":"retinal haemorrhage with vascular tortuosity","type":"exact"},{"name":"retinal hemorrhage with vascular tortuosity","type":"exact"},{"name":"tortuosity of retinal arteries","type":"exact"}],"termid":"MONDO:0008373","xrefs":{"Monarch":{"xref_id":"0008373"}}}


id: MONDO:0700225
data:
  {"annotated_genes":["SJAG_04277","SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012672"},{"annotations":[84572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"}]},"cv_name":"mondo","definition":"An instance of gallbladder disorder that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03363":null,"SJAG_04277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hereditary gallbladder disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:600803"],"termid":"MONDO:0700225","terms_by_termid":{"MONDO:0010939":null,"MONDO:0012672":null},"xrefs":{"Monarch":{"xref_id":"0700225"}}}


id: PBO:0082324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle; protein abundance increases in response to DNA replication stress","termid":"PBO:0082324"}


id: GO:0070392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a lipoteichoic acid stimulus is received by a cell and converted into a molecular signal; lipoteichoic acid is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["PMID:14665680","PMID:16020688","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of molecule of bacterial origin","termid":"GO:0032490"},{"relation_name":"is_a","term_name":"response to lipoteichoic acid","termid":"GO:0070391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of lipoteichoic acid","synonyms":[{"name":"detection of LTA","type":"exact"}],"termid":"GO:0070392"}


id: PBO:0082265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminophospholipid translocase (flippase); type 4 P-type ATPase; involved in phospholipid translocation, contributing to endocytosis, protein transport, and cellular polarization; localizes primarily to the plasma membrane; localizes to the shmoo tip where it has a redundant role in the cellular response to mating pheromone; DNF1 has a paralog, DNF2, that arose from the whole genome duplication","termid":"PBO:0082265"}


id: GO:0071885
data:
  {"annotated_genes":["SJAG_00508","SJAG_01425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89105,99801],"is_not":false,"summary":null,"term":"GO:0071885"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine (AdoMet) to the alpha-amino group of the N-terminal amino or imino acid residue of a protein substrate. For example, yeast Tae1p and mammalian family member METTL11A preferentially modify the N-terminal residue of substrates with the N-terminal sequence X-Pro-Lys, where X can be Pro, Ala, or Ser.","definition_xrefs":["PMID:20481588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00508":null,"SJAG_01425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0003674","GO:0016741","GO:0008276"],"is_obsolete":false,"name":"N-terminal protein N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.244"],"synonyms":[{"name":"X-Pro-Lys N-terminal methyltransferase","type":"narrow"}],"termid":"GO:0071885","terms_by_termid":{"GO:0071885":null}}


id: PBO:0082359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor with a role in endoplasmic reticulum degradation; involved specifically in autophagy of cortical and cytoplasmic ER in response to nitrogen starvation or rapamycin treatment; acts with COPII subunit Sfb3p; localizes to the cortical and cytoplasmic ER; similar to human FAM134B, which is also involved in ER autophagy and is associated with sensory neuropathy","termid":"PBO:0082359"}


id: FYPO:0006467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature non-coding RNA (ncRNA) measured in a cell is higher than normal. Total ncRNA or a specific ncRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased mature ncRNA level","synonyms":[{"name":"increased mature ncRNA accumulation","type":"related"},{"name":"increased mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature ncRNA level during vegetative growth","type":"exact"},{"name":"increased mature ncRNA transcript level","type":"exact"},{"name":"increased mature non-coding RNA level","type":"exact"},{"name":"increased ncRNA level","type":"broad"}],"termid":"FYPO:0006467"}


id: PBO:0076902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 56, pseudogene","termid":"PBO:0076902"}


id: MOD:00742
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a copper atom or a cluster containing copper for hydrogen atoms, or that coordinates a copper ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper containing modified residue","synonyms":[{"name":"CuRes","type":"exact"}],"termid":"MOD:00742"}


id: MONDO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the mediastinum.","definition_xrefs":["NCIT:C26827"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinitis","secondary_identifiers":["DOID:819","SCTID:47597000","UMLS:C0025064","ICD10CM:J98.51","icd11.foundation:1612791605","MEDGEN:9921","MESH:D008480","ICD9:519.2"],"termid":"MONDO:0004492","xrefs":{"Monarch":{"xref_id":"0004492"}}}


id: GO:1903049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of acetylcholine-gated cation channel activity.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:TermGenie","GOC:bf","PMID:21718690"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of acetylcholine-gated cation channel activity (obsolete GO:1903049)","synonyms":[{"name":"down regulation of acetylcholine-gated cation channel activity","type":"exact"},{"name":"down-regulation of acetylcholine-gated cation channel activity","type":"exact"},{"name":"downregulation of acetylcholine-gated cation channel activity","type":"exact"},{"name":"inhibition of acetylcholine-gated cation channel activity","type":"narrow"}],"termid":"GO:1903049"}


id: PBO:0029745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_calcium_import","termid":"PBO:0029745"}


id: MONDO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute infectious disorder that is caused by gram positive or gram negative bacteria; representative examples include pneumococcal, streptococcal, salmonella, and meningeal infections.","definition_xrefs":["NCIT:C2890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial infectious disease","secondary_identifiers":["MEDGEN:14012","DOID:104","ICD9:041.89","ICD9:040.89","ICD9:041.9","SCTID:87628006","MESH:D001424","UMLS:C0004623","EFO:0000771"],"synonyms":[{"name":"Bacteria caused disease or disorder","type":"exact"},{"name":"Bacteria disease or disorder","type":"exact"},{"name":"Bacteria infectious disease","type":"exact"},{"name":"bacterial disease","type":"exact"},{"name":"bacterial disorder","type":"exact"},{"name":"bacterial infection","type":"exact"},{"name":"bacterial infectious disease","type":"exact"},{"name":"infection, bacterial","type":"exact"},{"name":"infections, bacterial","type":"related"}],"termid":"MONDO:0005113","xrefs":{"Monarch":{"xref_id":"0005113"}}}


id: PR:O94751
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bub1 gene.","definition_xrefs":["PRO:DAN","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint serine/threonine-protein kinase BUB1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.12c","secondary_identifiers":["UniProtKB:O94751","PR:000035570"],"synonyms":[{"name":"BUB1 (pombe)","type":"exact"},{"name":"SPCC1322.12c","type":"related"},{"name":"Spom972h-bub1","type":"exact"}],"termid":"PR:O94751"}


id: PBO:0091116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku domain helicase (human XRCC6 ortholog) Pku70","termid":"PBO:0091116"}


id: GO:0048057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R3 and R4 pair of photoreceptors in the eye over time, from their formation to the mature structures. R3 and R4 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R3/R4 cell differentiation","termid":"GO:0048056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R3/R4 development","termid":"GO:0048057"}


id: PBO:0085315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylglycerol phospholipase C; regulates phosphatidylglycerol (PG) accumulation via a phospholipase C-type degradation mechanism; PG levels affect mitochondrial function; contains glycerophosphodiester phosphodiesterase motifs","termid":"PBO:0085315"}


id: FYPO:0006640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is abnormal during anaphase B of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle pole body during anaphase B","synonyms":[{"name":"abnormal protein localisation to mitotic spindle pole body during anaphase B","type":"exact"},{"name":"abnormal protein localization to mitotic SPB during anaphase B","type":"exact"},{"name":"abnormal protein localization to spindle pole body during anaphase B during vegetative growth","type":"exact"},{"name":"abnormal protein localization to spindle pole body during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006640"}


id: PBO:0025465
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentosuria","termid":"PBO:0025465"}


id: MONDO:0023170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal or multifocal malformations in neuronal migration","termid":"MONDO:0023170","xrefs":{"Monarch":{"xref_id":"0023170"}}}


id: GO:1905138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral DNA genome packaging via site-specific sequence recognition.","definition_xrefs":["GOC:TermGenie","PMID:24711378","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"is_a","term_name":"regulation of viral DNA genome packaging via site-specific sequence recognition","termid":"GO:1905137"},{"relation_name":"positively_regulates","term_name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral DNA genome packaging via site-specific sequence recognition","synonyms":[{"name":"activation of viral DNA genome packaging via site-specific sequence recognition","type":"narrow"},{"name":"up regulation of viral DNA genome packaging via site-specific sequence recognition","type":"exact"},{"name":"up-regulation of viral DNA genome packaging via site-specific sequence recognition","type":"exact"},{"name":"upregulation of viral DNA genome packaging via site-specific sequence recognition","type":"exact"}],"termid":"GO:1905138"}


id: PBO:0013764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg14","termid":"PBO:0013764"}


id: GO:0006482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a methyl group, from a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dealkylation","termid":"GO:0008214"},{"relation_name":"is_a","term_name":"demethylation","termid":"GO:0070988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein demethylation","synonyms":[{"name":"protein amino acid demethylation","type":"exact"}],"termid":"GO:0006482"}


id: PBO:0003741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp5","termid":"PBO:0003741"}


id: GO:0042836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-glucarate, the D-enantiomer of glucarate. D-glucarate is derived from either D-glucose or L-gulose.","definition_xrefs":["ISBN:0198506732","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"glucarate metabolic process","termid":"GO:0019392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-glucarate metabolic process","synonyms":[{"name":"D-glucarate metabolism","type":"exact"},{"name":"saccharate metabolic process","type":"exact"},{"name":"saccharate metabolism","type":"exact"}],"termid":"GO:0042836"}


id: GO:0097641
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116490],"is_not":false,"summary":null,"term":"GO:0097641"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate (alpha-ketoglutarate) + O2 + xanthine = CO2 + succinate + urate.","definition_xrefs":["GOC:vw","PMID:15948966","PMID:17429948","RHEA:43120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alpha-ketoglutarate-dependent xanthine dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoglutarate-dependent xanthine dioxygenase activity","type":"exact"},{"name":"alpha-ketoglutarate- and Fe(II)-dependent xanthine dioxygenase activity","type":"related"},{"name":"alpha-ketoglutarate- and Fe(II)-dependent xanthine hydroxylase activity","type":"related"}],"termid":"GO:0097641","terms_by_termid":{"GO:0097641":null}}


id: PBO:0063513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 1 pseudogene 2","termid":"PBO:0063513"}


id: GO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete effector caspase activity (obsolete GO:0004207)","synonyms":[{"name":"effector caspase activity","type":"exact"}],"termid":"GO:0004207"}


id: PR:000050493
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A division mal foutue 1 protein (Schizosaccharomyces pombe) that has not been phosphorylated at the positions equivalent to Ser-110, Ser-127, Ser-218, Ser-227, Ser-329, Ser-432, Ser-452, Ser-464, and Ser-531 of the amino acid sequence represented by UniProtKB:P78953. Example: UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:30853434","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division mal foutue 1 protein (Schizosaccharomyces pombe)","termid":"PR:000050491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mid1/UnPhos","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"PomBase_original_PRO_term_name: division mal foutue 1 protein unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mid1/Phos:1","type":"exact"},{"name":"UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, PR:000026291","type":"narrow"},{"name":"mid1/UnPhos","type":"exact"},{"name":"mid1/UnPhos:(S110,S127,S218,S227,S329,S432,S452,S464,S531)","type":"exact"}],"termid":"PR:000050493"}


id: PBO:0041727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II delta","termid":"PBO:0041727"}


id: PBO:0076388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin receptor 1","termid":"PBO:0076388"}


id: _global:negatively_regulates_characteristic
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a process and a characteristic in which process (P) negatively regulates characteristic (C) iff: P results in a decrease in the intensity or magnitude of C.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates_characteristic","termid":"_global:regulates_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates_characteristic","secondary_identifiers":["RO:0019002"],"termid":"_global:negatively_regulates_characteristic"}


id: SO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002117 <new term> (obsolete SO:0002117)","termid":"SO:0002117"}


id: GO:1900936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of nonadec-1-ene metabolic process","termid":"GO:1900933"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene biosynthetic process","termid":"GO:1900935"},{"relation_name":"negatively_regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of nonadec-1-ene formation","type":"exact"},{"name":"down regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of nonadec-1-ene formation","type":"exact"},{"name":"down-regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of nonadec-1-ene formation","type":"exact"},{"name":"downregulation of nonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of nonadec-1-ene formation","type":"exact"},{"name":"inhibition of nonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene formation","type":"exact"},{"name":"negative regulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900936"}


id: MONDO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare aggressive malignant smooth muscle neoplasm, arising from the bone. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C7154"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteosarcoma","termid":"MONDO:0009807"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone leiomyosarcoma","secondary_identifiers":["DOID:3367","UMLS:C1332579","MEDGEN:234043"],"synonyms":[{"name":"bone leiomyosarcoma","type":"exact"},{"name":"bone tissue leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of bone","type":"exact"},{"name":"leiomyosarcoma of bone tissue","type":"exact"}],"termid":"MONDO:0002624","xrefs":{"Monarch":{"xref_id":"0002624"}}}


id: PBO:0031798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_G2/M_phase_transition_(obsolete_FYPO:0000403)","termid":"PBO:0031798"}


id: MONDO:0023199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontonasal dysplasia phocomelic upper limbs","termid":"MONDO:0023199","xrefs":{"Monarch":{"xref_id":"0023199"}}}


id: GO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way, Once recruited to an RNA polymerase III promoter by one or more other transcription factors, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIIB-type transcription factor activity (obsolete GO:0001026)","synonyms":[{"name":"RNA polymerase III recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001026"}


id: PBO:0063952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate 4-kinase type 2 alpha","termid":"PBO:0063952"}


id: PBO:0086337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudogenic fragment with similarity to flocculins; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YHR212W-A has a paralog, YAR061W, that arose from a segmental duplication","termid":"PBO:0086337"}


id: PBO:0048521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 4","termid":"PBO:0048521"}


id: FYPO:0001075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing papulacandin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on papulacandin B","synonyms":[{"name":"normal cell population growth in presence of papulacandin B","type":"exact"},{"name":"normal cell population growth on papulacandin B","type":"exact"},{"name":"normal cellular response to papulacandin B","type":"related"},{"name":"normal vegetative cell population growth on papulacandin B","type":"exact"}],"termid":"FYPO:0001075"}


id: PBO:0114530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX2 complex subunit-like, poorly characterized, implicated in transcription or RNA surveillance","termid":"PBO:0114530"}


id: MONDO:0003950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the nipple","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system cancer","termid":"MONDO:0000653"},{"relation_name":"is_a","term_name":"nipple neoplasm","termid":"MONDO:0002482"},{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nipple carcinoma","secondary_identifiers":["UMLS:C1334966","MEDGEN:233756","DOID:6629","NCIT:C28432"],"synonyms":[{"name":"carcinoma of nipple","type":"exact"},{"name":"nipple cancer","type":"exact"},{"name":"nipple carcinoma","type":"exact"}],"termid":"MONDO:0003950","xrefs":{"Monarch":{"xref_id":"0003950"}}}


id: GO:0140625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the opioid growth factor (OGF, met-enkephalin) and transmitting the signal across the nuclear membrane. Met-enkephalin is an endogenous opioid peptide that binds to opioid and opioid growth factor receptors, regulating tissue growth in a variety of cellular processes.","definition_xrefs":["PMID:11890982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide receptor activity","termid":"GO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"opioid growth factor receptor activity","synonyms":[{"name":"met-enkephalin receptor activity","type":"related"},{"name":"metenkefalin receptor activity","type":"related"},{"name":"methionine enkephalin receptor activity","type":"exact"}],"termid":"GO:0140625"}


id: GO:0018846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: styrene oxide = phenylacetaldehyde.","definition_xrefs":["RHEA:21604","EC:5.3.99.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"styrene-oxide isomerase activity","secondary_identifiers":["UM-BBD_reactionID:r0034","KEGG_REACTION:R02615","MetaCyc:STYRENE-OXIDE-ISOMERASE-RXN"],"synonyms":[{"name":"SOI activity","type":"related"},{"name":"styrene oxide isomerase activity","type":"exact"},{"name":"styrene-oxide isomerase (epoxide-cleaving)","type":"related"}],"termid":"GO:0018846"}


id: PBO:0034292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_eaten_by","termid":"PBO:0034292"}


id: GO:0031125
data:
  {"annotated_genes":["SJAG_04006","SJAG_00081","SJAG_04153","SJAG_03745","SJAG_01521","SJAG_01191","SJAG_00854","SJAG_04818","SJAG_04174","SJAG_03179","SJAG_04369","SJAG_01818","SJAG_04824","SJAG_04084","SJAG_04321","SJAG_02993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[114575,96439,91443,106611,98136,115016,89183,103575,101261,95109,107642,104420,92271,105623,117422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000467"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"rRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rRNA 3' end processing","type":"exact"}],"termid":"GO:0031125","terms_by_termid":{"GO:0000461":null,"GO:0000467":null}}


id: FYPO:0002466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and cells with abnormal morphology (i.e. size, shape, or structure). The cells with normal morphology arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and cells with abnormal morphology (obsolete FYPO:0002466)","termid":"FYPO:0002466"}


id: GO:1990573
data:
  {"annotated_genes":["SJAG_01353","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88720,96191],"is_not":false,"summary":null,"term":"GO:1990573"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:9139127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"potassium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010107"],"synonyms":[{"name":"potassium import","type":"broad"},{"name":"potassium ion import","type":"broad"},{"name":"potassium ion uptake","type":"broad"}],"termid":"GO:1990573","terms_by_termid":{"GO:1990573":null}}


id: GO:0099532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which synaptic vesicles fuse to the presynaptic endosome followed by sorting of synaptic vesicle components and budding of new synaptic vesicles.","definition_xrefs":["GOC:dos","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"synaptic vesicle endosomal processing","synonyms":[{"name":"synaptic vesicle processing via endosome","type":"exact"}],"termid":"GO:0099532"}


id: GO:0060825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands contributing to the anterior/posterior pattern of the neural plate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060825"}


id: PBO:0086472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; DPI35 is not an essential gene","termid":"PBO:0086472"}


id: PBO:0061964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AD member 1 pseudogene","termid":"PBO:0061964"}


id: MONDO:0013836
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85522],"is_not":false,"summary":null,"term":"MONDO:0013836"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"},{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0005240","MONDO:0004069"],"is_obsolete":false,"name":"familial steroid-resistant nephrotic syndrome with sensorineural deafness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:280406","DOID:0070243","GARD:17295","OMIM:614650","UMLS:C3553349","MEDGEN:766263"],"synonyms":[{"name":"COQ10D6","type":"related"},{"name":"coenzyme Q10 deficiency, primary, 6","type":"related"},{"name":"coenzyme Q10 deficiency, primary, type 6","type":"exact"}],"termid":"MONDO:0013836","terms_by_termid":{"MONDO:0013836":null},"xrefs":{"Monarch":{"xref_id":"0013836"}}}


id: MONDO:1011603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, crab-eating macaque","secondary_identifiers":["OMIA:000284-9541"],"termid":"MONDO:1011603","xrefs":{"Monarch":{"xref_id":"1011603"}}}


id: GO:0015471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy independent passage of nucleoside, sized less than 1000 Da, across a membrane. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"},{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleoside-specific channel forming porin activity","termid":"GO:0015471"}


id: GO:0032908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"regulates","term_name":"transforming growth factor beta1 production","termid":"GO:0032905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of transforming growth factor beta1 production","synonyms":[{"name":"regulation of TGF-B1 production","type":"exact"},{"name":"regulation of TGFB1 production","type":"exact"},{"name":"regulation of transforming growth factor-beta1 production","type":"exact"}],"termid":"GO:0032908"}


id: FYECO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were cold shocked followed by recovery at a temperature range higher than normal for standard pombe growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock and recovery at high temperature","termid":"FYECO:0000323"}


id: PBO:0076154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURP and G-patch domain containing 2","termid":"PBO:0076154"}


id: PBO:0072628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 3","termid":"PBO:0072628"}


id: GO:1902196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isovaleryl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:11231285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"isovaleryl-CoA(4-) metabolic process","termid":"GO:1902195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044248","GO:0006629","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"isovaleryl-CoA(4-) catabolic process","synonyms":[{"name":"isovaleryl-CoA(4-) breakdown","type":"exact"},{"name":"isovaleryl-CoA(4-) catabolism","type":"exact"},{"name":"isovaleryl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902196"}


id: MONDO:0850368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amyloidosis that is characterized by both Ig heavy chains and LC contribute to the amyloid fibrils.","definition_xrefs":["DOID:0080935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"immunoglobulin heavy-and-light chain","termid":"MONDO:0850368","xrefs":{"Monarch":{"xref_id":"0850368"}}}


id: PBO:0076681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A3","termid":"PBO:0076681"}


id: FYPO:0006982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell wall are normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell wall morphology during vegetative growth","synonyms":[{"name":"normal cell wall morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006982"}


id: PomGeneEx:0000009
data:
  {"annotated_genes":["SJAG_01143","SJAG_00118"],"annotation_feature_type":"gene","cv_annotations":{"qualitative_gene_expression":[{"annotations":[118457,118438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"PomGeneEx:0000011"}]},"cv_name":"PomGeneExRNA","definition":"A qualifier that describes a level of RNA observed under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null},"genotype_count":0,"is_obsolete":false,"name":"RNA expression level","references_by_uniquename":{"PMID:25866389":null},"termid":"PomGeneEx:0000009","terms_by_termid":{"GO:0000087":null,"PomGeneEx:0000011":null}}


id: PBO:0114651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Age1","termid":"PBO:0114651"}


id: GO:0035152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that tracheal cells form and maintain tubular structures with the correct size and shape for their position in the network. This is essential for efficient flow of gases through the tracheal network.","definition_xrefs":["GOC:mtg_sensu","PMID:14570584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube architecture, open tracheal system","synonyms":[{"name":"regulation of tracheal tube architecture","type":"exact"}],"termid":"GO:0035152"}


id: MONDO:0011100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, retinitis pigmentosa, and sutural cataract","secondary_identifiers":["MEDGEN:316936","OMIM:601537","MESH:C563296","UMLS:C1832214"],"synonyms":[{"name":"microcephaly, retinitis pigmentosa, and sutural cataract","type":"exact"}],"termid":"MONDO:0011100","xrefs":{"Monarch":{"xref_id":"0011100"}}}


id: PBO:0051896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 5","termid":"PBO:0051896"}


id: GO:0006581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetylcholine, the acetic acid ester of the organic base choline.","definition_xrefs":["GOC:jl","ISBN:0192800752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine metabolic process","termid":"GO:0008291"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine catabolic process","synonyms":[{"name":"acetylcholine breakdown","type":"exact"},{"name":"acetylcholine catabolism","type":"exact"},{"name":"acetylcholine degradation","type":"exact"}],"termid":"GO:0006581"}


id: GO:0046060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dATP metabolic process","synonyms":[{"name":"dATP metabolism","type":"exact"}],"termid":"GO:0046060"}


id: PBO:0028883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K36_methylation","termid":"PBO:0028883"}


id: FYPO:0006692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal mitotic sister chromatid separation, producing inviable daughter cells, and in which the septum forms so as to separate the nucleus into two unequal masses, each in one compartment.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001985","FYPO:0000032","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000004"],"is_obsolete":false,"name":"cut with septum between unequally sized nuclei","synonyms":[{"name":"cut with septum between unequally sized nuclei during mitotic cell cycle","type":"related"},{"name":"cut with septum between unequally sized nuclei during vegetative growth","type":"exact"},{"name":"cut with unequally sized nuclei, one either side of septum","type":"exact"},{"name":"septation following abnormal mitotic sister chromatid segregation, with septum between unequally sized nuclei","type":"exact"}],"termid":"FYPO:0006692"}


id: PBO:0071877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 15","termid":"PBO:0071877"}


id: PR:Q9P6I2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic non-specific dipeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11014:SF15","OMA:SCHPO02354","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cys-Gly metallodipeptidase dug1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.08","secondary_identifiers":["UniProtKB:Q9P6I2"],"synonyms":[{"name":"GSH degradosomal complex subunit DUG1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CNDP2","type":"exact"}],"termid":"PR:Q9P6I2"}


id: MONDO:0020545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Staphylococcal toxic shock syndrome (staphylococcal TSS) is an acute disease mediated by the production of superantigenic toxins, characterized by high fever, skin rash followed by skin peeling, hypotension, vomiting, diarrhea and potentially leading to multisystem organ failure and caused by a Staphylococcus aureus bacterial infection.","definition_xrefs":["Orphanet:99919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic shock syndrome","termid":"MONDO:0001881"},{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal toxic-shock syndrome","secondary_identifiers":["SCTID:240450004","icd11.foundation:788554020","MedDRA:10044250","MEDGEN:811401","UMLS:C3714602","GARD:19710","ICD9:040.89"],"synonyms":[{"name":"Staphylococcus caused toxic shock syndrome","type":"exact"},{"name":"Staphylococcus toxic shock syndrome","type":"exact"},{"name":"staphylococcal TSS","type":"exact"}],"termid":"MONDO:0020545","xrefs":{"Monarch":{"xref_id":"0020545"}}}


id: GO:0006846
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035433"},{"annotations":[97897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"}]},"cv_name":"biological_process","definition":"The directed movement of acetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"acetate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006846","terms_by_termid":{"GO:0006847":null,"GO:0035433":null}}


id: PBO:0044207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 6","termid":"PBO:0044207"}


id: PBO:0056254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis associated long intergenic non-coding RNA 1","termid":"PBO:0056254"}


id: GO:0021770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the parahippocampal gyrus over time from its initial formation until its mature state. The parahippocampal gyrus is a ridge in the cerebral cortex.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GOC:dgh","GO_REF:0000021","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parahippocampal gyrus development","secondary_identifiers":["Wikipedia:parahippocampal_gyrus"],"synonyms":[{"name":"hippocampal gyrus development","type":"exact"}],"termid":"GO:0021770"}


id: GO:0101025
data:
  {"annotated_genes":["SJAG_03219","SJAG_03313","SJAG_04883","SJAG_04972","SJAG_04509","SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109469,92255,96878,97557,109066,87106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101026"}]},"cv_name":"biological_process","definition":"The process in which a nuclear membrane is synthesized, aggregates, and bonds together.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":6,"genes_by_uniquename":{"SJAG_03219":null,"SJAG_03313":null,"SJAG_04319":null,"SJAG_04509":null,"SJAG_04883":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"nuclear membrane biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0101025","terms_by_termid":{"GO:0101026":null}}


id: GO:0035229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of glutamate-cysteine ligase, typically by lowering its sensitivity to inhibition by glutathione and by increasing its affinity for glutamate.","definition_xrefs":["PMID:12954617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate-cysteine ligase activity","termid":"GO:0035227"},{"relation_name":"is_a","term_name":"positive regulation of ligase activity","termid":"GO:0051351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutamate-cysteine ligase activity","synonyms":[{"name":"activation of glutamate-cysteine ligase activity","type":"narrow"},{"name":"stimulation of glutamate-cysteine ligase activity","type":"narrow"},{"name":"up regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"up-regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"upregulation of glutamate-cysteine ligase activity","type":"exact"}],"termid":"GO:0035229"}


id: PBO:0027411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_thioredoxin_peroxidase_activity","termid":"PBO:0027411"}


id: GO:0002908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peripheral B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"is_a","term_name":"regulation of B cell deletion","termid":"GO:0002867"},{"relation_name":"regulates","term_name":"peripheral B cell deletion","termid":"GO:0002454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peripheral B cell deletion","termid":"GO:0002908"}


id: MONDO:0019252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other metabolic disease with skin involvement (obsolete MONDO:0019252)","secondary_identifiers":["Orphanet:79217"],"termid":"MONDO:0019252","xrefs":{"Monarch":{"xref_id":"0019252"}}}


id: PBO:0056156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mono-ADP ribosylhydrolase 1","termid":"PBO:0056156"}


id: MONDO:0015848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete septate vagina (obsolete MONDO:0015848)","secondary_identifiers":["HP:0001153","Orphanet:180154","SCTID:47054003","ICD9:752.49","icd11.foundation:1699475508"],"termid":"MONDO:0015848","xrefs":{"Monarch":{"xref_id":"0015848"}}}


id: GO:0044860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane raft","termid":"GO:1903044"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to plasma membrane raft","termid":"GO:0044860"}


id: PBO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.41","termid":"PBO:0002311"}


id: PBO:0113357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for sporulation; induced during meiosis and sporulation; gene is a member of Centroid, a centromere-linked gene family; not an essential gene; YNL034W has a paralog, YNL018C, that arose from a segmental duplication","termid":"PBO:0113357"}


id: PBO:0077372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM109 divergent transcript","termid":"PBO:0077372"}


id: FYPO:0008197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum occurs to a lower extent than normal.","definition_xrefs":["PMID:37553386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal reticulophagy during vegetative growth","termid":"FYPO:0007445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased reticulophagy during vegetative growth","termid":"FYPO:0008197"}


id: PBO:0004550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Rsv2","termid":"PBO:0004550"}


id: GO:0006385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase III promoter by the addition of ribonucleotides catalyzed by RNA polymerase III.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase III","synonyms":[{"name":"RNA elongation from Pol III promoter","type":"exact"},{"name":"RNA polymerase III transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase III promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006385"}


id: GO:0036447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the accumulation of sugar-phosphate.","definition_xrefs":["GOC:am","PMID:17383224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sugar-phosphate stress","synonyms":[{"name":"cellular response to presence of non-metabolizable sugars","type":"related"}],"termid":"GO:0036447"}


id: PBO:0064002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 36","termid":"PBO:0064002"}


id: PBO:0091850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA primary transcript (predicted)","termid":"PBO:0091850"}


id: FYPO:0007127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin contractile ring maturation is abnormal.","definition_xrefs":["PomBase:mah","GO:1902406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actomyosin contractile ring maturation","synonyms":[{"name":"abnormal actomyosin contractile ring maintenance","type":"exact"},{"name":"abnormal actomyosin contractile ring maturation during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring maturation during vegetative growth","type":"exact"},{"name":"abnormal contractile ring maturation","type":"exact"},{"name":"abnormal mitotic actomyosin contractile ring maintenance","type":"exact"},{"name":"abnormal mitotic actomyosin contractile ring maturation","type":"exact"},{"name":"abnormal mitotic contractile ring maintenance","type":"exact"}],"termid":"FYPO:0007127"}


id: PBO:0088932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein Cwh43","termid":"PBO:0088932"}


id: GO:0120178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any steroid hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:krc","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"steroid hormone biosynthetic process","termid":"GO:0120178"}


id: GO:0032093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SAM (Sterile Alpha Motif) domain, which is a 70-amino acid protein sequence that participates in protein-protein, protein-lipid, and protein-RNA interactions and is conserved from lower to higher eukaryotes.","definition_xrefs":["GOC:mcc","PMID:16337230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SAM domain binding","synonyms":[{"name":"Sterile Alpha Motif domain binding","type":"exact"}],"termid":"GO:0032093"}


id: PBO:0086991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for 25S rRNA maturation and 60S ribosomal subunit assembly; localizes to the nucleolus and in foci along nuclear periphery; constituent of 66S pre-ribosomal particles; cooperates with Rrs1p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering","termid":"PBO:0086991"}


id: PBO:0031574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vegetative_cell","termid":"PBO:0031574"}


id: GO:0009641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Shade avoidance is a set of responses that plants display when they are subjected to the shade of another plant. It often includes elongation, altered flowering time, increased apical dominance and altered partitioning of resources. Plants are able to distinguish between the shade of an inanimate object (e.g. a rock) and the shade of another plant due to the altered balance between red and far-red light in the shade of a plant; this balance between red and far-red light is perceived by phytochrome.","definition_xrefs":["Wikipedia:Shade_avoidance"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shade avoidance","termid":"GO:0009641"}


id: FYPO:0008249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more protein-coding genes is decreased.","definition_xrefs":["PMID:25356590","PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at protein coding gene","termid":"FYPO:0008249"}


id: PBO:0061265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notochord homeobox","termid":"PBO:0061265"}


id: PBO:0071646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 10","termid":"PBO:0071646"}


id: PBO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCXR divergent transcript","termid":"PBO:0044666"}


id: GO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that takes place mainly in germinal center B cells in which a large number of mutations are generated in the heavy chain and light chain V-region genes and their immediately surrounding introns in order to increase antibody diversity and contribute to affinity maturation.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor editing","termid":"GO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"peripheral B cell receptor editing","synonyms":[{"name":"peripheral B lymphocyte receptor editing","type":"exact"},{"name":"peripheral B-cell receptor editing","type":"exact"},{"name":"peripheral B-lymphocyte receptor editing","type":"exact"}],"termid":"GO:0002345"}


id: PBO:0091433
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat for base excision activity of N7-methylguanine = 2.6 x 10^-3 s-1","termid":"PBO:0091433"}


id: PBO:0064071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 105","termid":"PBO:0064071"}


id: PBO:0074580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 1","termid":"PBO:0074580"}


id: PBO:0028028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiotic_anaphase_I","termid":"PBO:0028028"}


id: MONDO:1010494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, sheep","secondary_identifiers":["OMIA:001041-9940"],"termid":"MONDO:1010494","xrefs":{"Monarch":{"xref_id":"1010494"}}}


id: GO:0060607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell along the edges of two epithelial folds, giving rise to the lumen of an epithelial tube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"tube closure","termid":"GO:0060606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in sealing an epithelial fold","termid":"GO:0060607"}


id: GO:1903792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anion transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11336802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transport","termid":"GO:0044070"},{"relation_name":"negatively_regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monoatomic anion transport","synonyms":[{"name":"down regulation of anion transport","type":"exact"},{"name":"down-regulation of anion transport","type":"exact"},{"name":"downregulation of anion transport","type":"exact"},{"name":"inhibition of anion transport","type":"narrow"},{"name":"negative regulation of anion transport","type":"broad"}],"termid":"GO:1903792"}


id: PBO:0053887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1167","termid":"PBO:0053887"}


id: GO:0044614
data:
  {"annotated_genes":["SJAG_03847","SJAG_01013","SJAG_03299","SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88214,93183,102171,107845],"is_not":false,"summary":null,"term":"GO:0044614"}]},"cv_name":"cellular_component","definition":"Filamentous extensions on cytoplasmic face of the nuclear pore complex (NPC). In S. cerevisiae, Nup159p, Nup82p, and Nup42p contribute to the cytoplasmic filaments. In vertebrates, Nup358 is a major component.","definition_xrefs":["GOC:dgf","PMID:20947011","PMID:18046406","PMID:22419078","PMID:19524430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01065":null,"SJAG_03299":null,"SJAG_03847":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575","GO:0005643"],"is_obsolete":false,"name":"nuclear pore cytoplasmic filaments","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic fibers of the NPC","type":"exact"},{"name":"cytoplasmic fibers of the nuclear pore complex","type":"exact"}],"termid":"GO:0044614","terms_by_termid":{"GO:0044614":null}}


id: GO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deoxynucleotide, a deoxyribonucleoside in ester linkage to phosphate, commonly at the 5' position of deoxyribose, into, out of or within a cell.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"deoxynucleotide transport","termid":"GO:0030302"}


id: GO:0035187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism during the emergence from an egg shell. In Drosophila for example, the larva swings its head reiteratively through a semicircular arc, using its mouth hooks to tear apart the chorion in front of it and thus free itself from within the egg shell.","definition_xrefs":["PMID:10436051","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"hatching","termid":"GO:0035188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hatching behavior","synonyms":[{"name":"hatching behaviour","type":"exact"}],"termid":"GO:0035187"}


id: PR:Q09841
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.07","secondary_identifiers":["UniProtKB:Q09841"],"synonyms":[{"name":"Spom972h-PSMB7","type":"exact"}],"termid":"PR:Q09841"}


id: MONDO:0008661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized well circumscribed patches of leukoderma that are generally distributed over symmetric body locations and is due to autoimmune destruction of melanocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"vitiligo","secondary_identifiers":["MEDGEN:22677","MESH:D014820","EFO:0004208","icd11.foundation:1894744640","NCIT:C26915","DOID:12306","Orphanet:247871","ICD9:709.01","UMLS:C0042900","ICD10CM:L80"],"termid":"MONDO:0008661","xrefs":{"Monarch":{"xref_id":"0008661"}}}


id: PR:Q9P793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mit1 gene.","definition_xrefs":["UniProtKB:Q9P793","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin remodeling factor mit1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.10","synonyms":[{"name":"Mi2-like interacting with clr3 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SHREC protein mit1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mit1","type":"exact"},{"name":"snf2/Hdac-containing repressor complex protein mit1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P793"}


id: GO:0035274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to diphenyl phthalate, C(20)H(14)O(4).","definition_xrefs":["PMID:34697989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"diphenyl phthalate binding","synonyms":[{"name":"DPP binding","type":"exact"}],"termid":"GO:0035274"}


id: FYPO:0002181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores and spheroid vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores and spheroid cells (obsolete FYPO:0002181)","synonyms":[{"name":"inviable mixed population including germinated spores and rounded cells","type":"exact"}],"termid":"FYPO:0002181"}


id: GO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + UDP-D-galactose = 3-[alpha-D-galactosyl-(1->6)-beta-D-galactosyl]-1,2-diacyl-sn-glycerol + H+ + UDP.","definition_xrefs":["EC:2.4.1.241","RHEA:10520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"digalactosyldiacylglycerol synthase activity","secondary_identifiers":["KEGG_REACTION:R04469","MetaCyc:RXN-1225","Wikipedia:Digalactosyldiacylglycerol_synthase"],"synonyms":[{"name":"DGD1","type":"narrow"},{"name":"DGD2","type":"narrow"},{"name":"DGDG synthase activity","type":"broad"},{"name":"UDP-galactose-dependent DGDG synthase activity","type":"related"},{"name":"UDP-galactose-dependent digalactosyldiacylglycerol synthase activity","type":"related"},{"name":"UDP-galactose:3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol 6-alpha-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:MGDG galactosyltransferase activity","type":"exact"}],"termid":"GO:0046481"}


id: SO:0001546
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that changes the stability of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_function_variant","termid":"SO:0001538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_stability_variant","synonyms":[{"name":"transcript stability variant","type":"exact"}],"termid":"SO:0001546"}


id: PBO:0088855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD-finger protein Cph2","termid":"PBO:0088855"}


id: PR:C6Y4B8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F3.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4B8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22F3.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.15","synonyms":[{"name":"Spom972h-SPAC22F3.15","type":"exact"}],"termid":"PR:C6Y4B8"}


id: PBO:0029166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation","termid":"PBO:0029166"}


id: PR:O42939
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SUMO-activating enzyme subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10953:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-activating enzyme E1-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.03c","secondary_identifiers":["UniProtKB:O42939"],"synonyms":[{"name":"SPBC16H5.03c","type":"related"},{"name":"Spom972h-UBA2","type":"exact"},{"name":"pmt3-activating enzyme subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42939"}


id: GO:0035680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a posterior lateral line neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell morphogenesis","termid":"GO:0035678"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast hair cell development","termid":"GO:0035677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell morphogenesis","termid":"GO:0035680"}


id: PBO:0044180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNNBL1 pseudogene 1","termid":"PBO:0044180"}


id: PR:Q10366
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol 4-kinase beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10048:SF22","OMA:SCHPO02103","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase pik1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.16c","secondary_identifiers":["UniProtKB:Q10366"],"synonyms":[{"name":"PI4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PI4KB","type":"exact"}],"termid":"PR:Q10366"}


id: MONDO:0001789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurofibroma that arises from the spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibroma of spinal cord","secondary_identifiers":["UMLS:C1336047","DOID:13742","MEDGEN:234804","NCIT:C5145"],"synonyms":[{"name":"neurofibroma of spinal cord","type":"exact"},{"name":"spinal cord neurofibroma","type":"exact"}],"termid":"MONDO:0001789","xrefs":{"Monarch":{"xref_id":"0001789"}}}


id: MONDO:1011834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar abiotrophy, non-human animal","secondary_identifiers":["OMIA:000175"],"termid":"MONDO:1011834","xrefs":{"Monarch":{"xref_id":"1011834"}}}


id: PBO:0042014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 71","termid":"PBO:0042014"}


id: GO:1901636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of maintenance of presynaptic active zone structure (obsolete GO:1901636)","synonyms":[{"name":"down regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"down-regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"downregulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"inhibition of maintenance of presynaptic active zone structure","type":"narrow"},{"name":"negative regulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901636"}


id: GO:0007480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a leg derived from an imaginal disc are generated and organized. A leg is a limb on which an animal walks and stands. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"leg disc morphogenesis","termid":"GO:0007478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}


id: MONDO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic proliferation of spindle to ovoid cells which show phenotypic features similar to those of interdigitating dendritic cells. The clinical course is generally aggressive. (WHO, 2008)","definition_xrefs":["NCIT:C9282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"interdigitating dendritic cell sarcoma","secondary_identifiers":["ICDO:9757/1","MESH:D054739","ONCOTREE:IDCS","UMLS:C1260326","ICDO:9757/3","NANDO:2200035","icd11.foundation:214592620","SCTID:715664005","EFO:0007329","MEDGEN:266040","icd11.foundation:2024362257","DOID:7848"],"synonyms":[{"name":"interdigitating Dendritic cell sarcoma","type":"exact"},{"name":"interdigitating Dendritic cell sarcoma/tumor","type":"exact"},{"name":"interdigitating cell sarcoma","type":"broad"},{"name":"interdigitating cell sarcoma/tumor","type":"exact"}],"termid":"MONDO:0005813","xrefs":{"Monarch":{"xref_id":"0005813"}}}


id: GO:0036254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amiloride stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to amiloride (obsolete GO:0036254)","termid":"GO:0036254"}


id: MONDO:0100438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by biallelic variants in the AIPL1 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"AIPL1-related retinopathy","synonyms":[{"name":"AIPL1 Leber congenital amaurosis","type":"narrow"},{"name":"AIPL1 retinopathy","type":"exact"},{"name":"LCA4","type":"narrow"},{"name":"Leber congenital amaurosis 4","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in AIPL1","type":"narrow"},{"name":"Leber congenital amaurosis type 4","type":"narrow"},{"name":"amaurosis congenita of Leber, type 4","type":"narrow"},{"name":"cone-rod dystrophy","type":"narrow"},{"name":"cone-rod dystrophy, AIPL1-related","type":"narrow"},{"name":"retinitis pigmentosa, juvenile","type":"narrow"},{"name":"retinitis pigmentosa, juvenile, AIPL1-related","type":"narrow"}],"termid":"MONDO:0100438","xrefs":{"Monarch":{"xref_id":"0100438"}}}


id: MONDO:0012359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of combined T and B cell immunodeficiency (CID) characterized by severe and persistent cytomegalovirus (CMV) infection and autoimmune cytopenia.","definition_xrefs":["Orphanet:231154"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to partial RAG1 deficiency","secondary_identifiers":["UMLS:C1835931","MESH:C563691","OMIM:609889","MEDGEN:372161","SCTID:725290000","GARD:13712"],"synonyms":[{"name":"CID due to partial RAG1 deficiency","type":"exact"},{"name":"CID with expansion of gamma delta T cells","type":"exact"},{"name":"alpha/beta T-cell lymphopenia with gamma/DELTA T-cell expansion, severe CYTOMEGALOVIRUS infection, and autoimmunity","type":"related"},{"name":"combined immunodeficiency with expansion of gamma delta T cells","type":"exact"}],"termid":"MONDO:0012359","xrefs":{"Monarch":{"xref_id":"0012359"}}}


id: GO:0106092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of a glial cell process or projection to wrap around an axon.","definition_xrefs":["GOC:ha","PMID:27131624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"},{"relation_name":"is_a","term_name":"glial cell projection elongation","termid":"GO:0106091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell projection elongation involved in axon ensheathment","termid":"GO:0106092"}


id: PBO:0088874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylpeptide hydrolase","termid":"PBO:0088874"}


id: PBO:0042748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein U pseudogene 1","termid":"PBO:0042748"}


id: PBO:0041642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 H","termid":"PBO:0041642"}


id: PBO:0053045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 4B","termid":"PBO:0053045"}


id: PBO:0031881
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding between Myh1 and Hus1 increases in response to oxidative stress","termid":"PBO:0031881"}


id: PBO:0045494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatan sulfate epimerase like","termid":"PBO:0045494"}


id: PBO:0045970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early growth response 3","termid":"PBO:0045970"}


id: MONDO:0100042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac conduction defect","secondary_identifiers":["UMLS:C0264886","NCIT:C78245","MEDGEN:78114","OMIM:115080"],"synonyms":[{"name":"cardiac conduction disorder","type":"broad"},{"name":"conduction disorder","type":"broad"},{"name":"disorder of cardiac conduction","type":"broad"},{"name":"heart conduction disorder","type":"broad"}],"termid":"MONDO:0100042","xrefs":{"Monarch":{"xref_id":"0100042"}}}


id: PBO:0042952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 6","termid":"PBO:0042952"}


id: GO:0003883
data:
  {"annotated_genes":["SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86999],"is_not":false,"summary":null,"term":"GO:0003883"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UTP + glutamine + H20= ADP + phosphate + CTP + glutamate.","definition_xrefs":["PMID:12354108","RHEA:26426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"CTP synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CTPSYN-RXN","Reactome:R-HSA-504054","EC:6.3.4.2","Reactome:R-HSA-73647"],"synonyms":[{"name":"CTP synthetase activity","type":"related"},{"name":"UTP--ammonia ligase activity","type":"related"},{"name":"UTP:ammonia ligase (ADP-forming)","type":"related"},{"name":"cytidine 5'-triphosphate synthetase activity","type":"related"},{"name":"cytidine triphosphate synthetase activity","type":"related"},{"name":"uridine triphosphate aminase activity","type":"related"}],"termid":"GO:0003883","terms_by_termid":{"GO:0003883":null}}


id: GO:0097272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of an internal steady state of ammonium.","definition_xrefs":["PMID:12695560","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"ammonium homeostasis","synonyms":[{"name":"ammonia homeostasis","type":"exact"}],"termid":"GO:0097272"}


id: PBO:0088970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease, unknown biological role, associated with COP1 coated vesicle","termid":"PBO:0088970"}


id: PBO:0067260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 334, pseudogene","termid":"PBO:0067260"}


id: PBO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 2","termid":"PBO:0003109"}


id: GO:0140599
data:
  {"annotated_genes":["SJAG_04284","SJAG_03200","SJAG_04578","SJAG_01584","SJAG_03729","SJAG_01745","SJAG_01374","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89331,90149,90536,95316,109566,109600,115171,115548],"is_not":false,"summary":null,"term":"GO:0140599"}]},"cv_name":"cellular_component","definition":"A nuclear membrane part at the midzone of the mitotic nuclear bridge. The midzone forms a bulge that is enriched in nuclear pores that lack baskets.","definition_xrefs":["PMID:25963819","PMID:32502403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic nuclear bridge midzone","termid":"GO:0140512"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_01584":null,"SJAG_01745":null,"SJAG_03200":null,"SJAG_03729":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"mitotic nuclear bridge midzone membrane domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140599","terms_by_termid":{"GO:0140599":null}}


id: PBO:0064150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 2 pseudogene 1","termid":"PBO:0064150"}


id: PATO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to be reduced to smaller pieces with little effort.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Friability"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"friability","termid":"PATO:0002405"}


id: PBO:0060529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 2","termid":"PBO:0060529"}


id: MONDO:0020326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphomatoid papulosis (LyP) is a rare cutaneous condition characterized by chronic, recurrent, and self-regressing papulonodular skin eruptions. It belongs to the spectrum of primary cutaneous CD30+ lymphoproliferative disorders, along with primary cutaneous anaplastic large cell lymphoma (primary C-ALCL) with which it shares overlapping clinical and histopathologic features.","definition_xrefs":["Orphanet:98842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous CD30+ T-cell lymphoproliferative disease","termid":"MONDO:0018897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"lymphomatoid papulosis","secondary_identifiers":["UMLS:C0206182","ONCOTREE:LYP","GARD:6944","ICD9:447.8","MedDRA:10056670","ICDO:9718/1","MEDGEN:61534","NCIT:C3721","MESH:D017731","SCTID:31047003","icd11.foundation:1791207220"],"synonyms":[{"name":"LYP","type":"related"},{"name":"LyP","type":"exact"}],"termid":"MONDO:0020326","xrefs":{"Monarch":{"xref_id":"0020326"}}}


id: MONDO:0800452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inherited bone marrow failure syndrome, in which the cause of the disease is a variation in the MPL gene. It is characterized by an isolated and severe decrease in the number of platelets and megakaryocytes during the first years of life that develops into bone marrow failure with pancytopenia later in childhood.","definition_xrefs":["Orphanet:3319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"congenital amegakaryocytic thrombocytopenia","termid":"MONDO:0800451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital amegakaryocytic thrombocytopenia 1","secondary_identifiers":["SCTID:716336002","GARD:640","MEDGEN:1845022","UMLS:C5882667","MESH:C535982","NCIT:C115207","OMIM:604498","DOID:0090118"],"synonyms":[{"name":"CAMT1","type":"exact"},{"name":"amegakaryocytic thrombocytopenia, congenital 1","type":"exact"},{"name":"congenital amegakaryocytic thrombocytopenic purpura","type":"exact"},{"name":"thrombocytopenia congenital amegakaryocytic","type":"related"},{"name":"thrombocytopenia, congenital amegakaryocytic","type":"exact"}],"termid":"MONDO:0800452","xrefs":{"Monarch":{"xref_id":"0800452"}}}


id: MONDO:0005960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Silicosis is a respiratory disease caused by breathing in (inhaling) silica dust. There are three types of silicosis: Simple chronic silicosis, the most common type of silicosis, results from long-term exposure (usually more than 20years) to low amounts of silica dust. Simple chronic silicosismay causepeople to have difficulty breathing. Accelerated silicosis occurs after 5 to 15 yearsof exposure of higher levels of silica.Swelling of the lungsand other symptoms occur faster in this type of silicosis than in the simple chronic form. Acute silicosis results from short-term exposure (weeks or months) of large amounts of silica.The lungs become very inflamed and can fill with fluid, causing severe shortness of breath and low blood oxygen levels. A cough, weight loss, and fatigue may also be present. Acute silicosis progresses rapidly and can be fatal within months. People who work in jobs where they are exposed to silica dust (mining, quarrying, construction, sand blasting, stone cutting) are at risk of developing this condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silicosis","secondary_identifiers":["DOID:10325","NCIT:C3369","ICD9:502","MEDGEN:20758","UMLS:C0037116","SCTID:805002","EFO:0007485","MESH:D012829","GARD:7647"],"synonyms":[{"name":"accelerated silicosis","type":"related"},{"name":"acute silicosis","type":"related"},{"name":"chronic silicosis","type":"related"},{"name":"experimental silicosis","type":"related"},{"name":"nodular silicosis","type":"related"},{"name":"pneumoconiosis caused by silica","type":"related"},{"name":"pneumoconiosis due to silica","type":"exact"},{"name":"pneumoconiosis due to silicates","type":"exact"},{"name":"silica pneumoconiosis","type":"exact"},{"name":"silicatosis","type":"related"},{"name":"silicosis","type":"exact"},{"name":"silicotic fibrosis of lung","type":"exact"},{"name":"silicotuberculosis","type":"narrow"}],"termid":"MONDO:0005960","xrefs":{"Monarch":{"xref_id":"0005960"}}}


id: MONDO:0010039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart defect B round face B congenital developmental delay is very rare syndrome described in three sibs of one Japanese family and characterized by congenital heart disease, round face with depressed nasal bridge, small mouth, short stature, and relatively dark skin and typical dermatoglyphic anomalies, and intellectual deficit.","definition_xrefs":["Orphanet:1355"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart defect-round face-developmental delay syndrome","secondary_identifiers":["MESH:C536680","MEDGEN:167108","OMIM:270460","SCTID:715987000","UMLS:C0796162","GARD:4905"],"synonyms":[{"name":"Sonoda syndrome","type":"exact"},{"name":"round face with depressed nasal Bridge and small mouth, congenital heart defect, and retarded development","type":"related"}],"termid":"MONDO:0010039","xrefs":{"Monarch":{"xref_id":"0010039"}}}


id: PBO:0057310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 517a","termid":"PBO:0057310"}


id: PBO:0073893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 9","termid":"PBO:0073893"}


id: PBO:0039971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 2","termid":"PBO:0039971"}


id: MONDO:0019296
data:
  {"annotated_genes":["SJAG_01926","SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[84768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011213"}]},"cv_name":"mondo","definition":"A disease involving the superficial fascia.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic skin disease (obsolete MONDO:0019043)","termid":"MONDO:0019043"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_01926":null},"genotype_count":0,"is_obsolete":false,"name":"subcutaneous tissue disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1290008","MEDGEN:712397","Orphanet:79382"],"synonyms":[{"name":"disease of superficial fascia","type":"exact"},{"name":"disease or disorder of superficial fascia","type":"exact"},{"name":"disorder of superficial fascia","type":"exact"},{"name":"superficial fascia disease","type":"exact"},{"name":"superficial fascia disease or disorder","type":"exact"}],"termid":"MONDO:0019296","terms_by_termid":{"MONDO:0007908":null,"MONDO:0011213":null},"xrefs":{"Monarch":{"xref_id":"0019296"}}}


id: PBO:0091940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, expressed in stationary phase and quiescence","termid":"PBO:0091940"}


id: MONDO:0007635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frasier syndrome is characterized by the association of male pseudohermaphrodism and glomerular nephropathy. This syndrome is associated with a high risk of developing gonadoblastoma.","definition_xrefs":["Orphanet:347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Frasier syndrome","secondary_identifiers":["MESH:D052159","UMLS:C0950122","NCIT:C122805","ICD9:759.89","icd11.foundation:1659542949","MEDGEN:215533","DOID:0050438","GARD:2375","OMIM:136680","SCTID:445431000"],"synonyms":[{"name":"Frasier syndrome","type":"exact"},{"name":"Frasier syndrome, autosomal dominant, somatic mutation","type":"exact"}],"termid":"MONDO:0007635","xrefs":{"Monarch":{"xref_id":"0007635"}}}


id: PBO:0044450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 29, pseudogene","termid":"PBO:0044450"}


id: FYPO:0005272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule plus-end directed mitotic chromosome migration does not occur. In microtubule plus-end directed mitotic chromosome migration, chromosomes that are laterally attached to one or more mitotic spindle microtubules migrate towards the spindle equator via plus-end-directed movement along the microtubules.","definition_xrefs":["GO:0099606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule plus-end directed mitotic chromosome migration","termid":"FYPO:0005271"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000337","FYPO:0005447"],"is_obsolete":false,"name":"abolished microtubule plus-end directed mitotic chromosome migration","synonyms":[{"name":"abolished microtubule plus-end directed chromosome migration during mitosis","type":"exact"},{"name":"abolished microtubule plus-end directed mitotic chromosome migration during vegetative growth","type":"exact"},{"name":"abolished microtubule plus-end-directed mitotic chromosome migration","type":"exact"},{"name":"abolished plus-end directed chromosome gliding","type":"exact"},{"name":"microtubule plus-end directed mitotic chromosome migration abolished","type":"exact"}],"termid":"FYPO:0005272"}


id: FYECO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cisplatin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cisplatin","termid":"FYECO:0000091"}


id: GO:0061069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the male urethra over time from its initial formation to the mature structure. The male urethra is a renal system organ that carries urine from the bladder through the penis to outside the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethra development","termid":"GO:0061068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male urethra development","termid":"GO:0061069"}


id: PBO:0046651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESAM antisense RNA 1","termid":"PBO:0046651"}


id: GO:0030576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of Cajal bodies, nuclear bodies that appear ultrastructurally as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter and are enriched in ribonucleoproteins, and certain general RNA polymerase II transcription factors.","definition_xrefs":["GOC:mah","PMID:11031238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Cajal body organization","synonyms":[{"name":"Cajal body organisation","type":"exact"},{"name":"Cajal body organization and biogenesis","type":"related"}],"termid":"GO:0030576"}


id: PBO:0091873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pho84 repressing sense RNA Prt2","termid":"PBO:0091873"}


id: FYPO:0001310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal viability in stationary phase","synonyms":[{"name":"normal cell population viability in stationary phase","type":"exact"},{"name":"normal chronological cell aging","type":"related"},{"name":"normal chronological lifespan","type":"related"}],"termid":"FYPO:0001310"}


id: FYPO:0006753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:29632066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased H4-K20 dimethylation during vegetative growth","termid":"FYPO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H4-K20 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H4 K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H4-K20 dimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H4K20me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H4 K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H4-K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006753"}


id: GO:0032454
data:
  {"annotated_genes":["SJAG_03041","SJAG_03997","SJAG_02401","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111370,116886],"is_not":false,"summary":null,"term":"GO:0032454"},{"annotations":[102407,93283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 9 of the histone H3 protein.","definition_xrefs":["PMID:16362057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02401":null,"SJAG_03041":null,"SJAG_03664":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0032452","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H3K9 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-997263","Reactome:R-HSA-9011949","Reactome:R-HSA-9011985"],"synonyms":[{"name":"histone H3-K49 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-9 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0032454","terms_by_termid":{"GO:0032454":null,"GO:0140683":null}}


id: PBO:0029794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actin_cable_retrograde_transport","termid":"PBO:0029794"}


id: GO:0098856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which lipids are taken up from the contents of the intestine.","definition_xrefs":["GOC:sl","GOC:dos","PMID:18768481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal lipid absorption","termid":"GO:0098856"}


id: PBO:0053569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 587","termid":"PBO:0053569"}


id: MOD:01208
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal residue to the copper(1+) carboxylate salt.","definition_xrefs":["Unimod:531#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(1+) carboxylate C-terminal residue","synonyms":[{"name":"Cation:Cu[I]","type":"related"},{"name":"Replacement of proton by copper","type":"related"},{"name":"cuprous salt","type":"exact"}],"termid":"MOD:01208"}


id: PBO:0086479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial ribosomal protein of the large subunit; required for respiratory growth and for efficient translation of mitochondrial COX1 and COX3;  conditional mutant has reduced cytochrome c oxidase activity; protein increases in abundance and relocalizes to the plasma membrane upon DNA replication stress; contains and N-terminal mitochondrial targeting sequence; similar to E. coli L34 ribosomal protein","termid":"PBO:0086479"}


id: PR:P87172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02799","PANTHER:PTHR12526:SF37","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.07","secondary_identifiers":["UniProtKB:P87172"],"synonyms":[{"name":"GlcNAc-PI synthesis protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGA","type":"exact"}],"termid":"PR:P87172"}


id: PBO:0026643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_mitotic_spindle_assembly_checkpoint_signaling","termid":"PBO:0026643"}


id: PBO:0004304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp9","termid":"PBO:0004304"}


id: PBO:0075237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 9","termid":"PBO:0075237"}


id: MONDO:0003590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liposarcoma characterized by the presence of a fibroblastic component.","definition_xrefs":["NCIT:C6509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fibroblastic liposarcoma","secondary_identifiers":["ICDO:8857/3","MEDGEN:266103","DOID:5698","UMLS:C1266130"],"synonyms":[{"name":"fibroblastic liposarcoma","type":"exact"},{"name":"fibroblastic liposarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003590","xrefs":{"Monarch":{"xref_id":"0003590"}}}


id: PBO:0070115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 29 pseudogene","termid":"PBO:0070115"}


id: GO:0032289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by an oligodendrocyte in the central nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin assembly","termid":"GO:0032288"},{"relation_name":"part_of","term_name":"central nervous system myelination","termid":"GO:0022010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"central nervous system myelin formation","synonyms":[{"name":"central nervous system myelin sheath formation","type":"exact"},{"name":"myelin formation in central nervous system","type":"exact"}],"termid":"GO:0032289"}


id: PBO:0085309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase with sequence similarity to Mih1p; member of the Cdc25p subfamily of tyrosine phosphatases and Arr2p, an arsenate reductase, based on the presence of a rhodanese-homology domain; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0085309"}


id: MONDO:0850445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peritoneal benign neoplasm that is characterized by the presence of prominent hemangiopericytoma-like vessels.","definition_xrefs":["DOID:0081026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal benign neoplasm","termid":"MONDO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign peritoneal solitary fibrous tumor","termid":"MONDO:0850445","xrefs":{"Monarch":{"xref_id":"0850445"}}}


id: PBO:0077159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE1 divergent transcript","termid":"PBO:0077159"}


id: PBO:0058142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4438","termid":"PBO:0058142"}


id: PBO:0079068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-2","termid":"PBO:0079068"}


id: GO:0048548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pinocytosis. Pinocytosis is the process in which cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of pinocytosis","termid":"GO:0048548"}


id: MONDO:0002977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the degeneration of the nervous system due to autoimmunity. Representative examples include multiple sclerosis, Guillain-Barre syndrome, and myasthenia gravis.","definition_xrefs":["NCIT:C99383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of the nervous system","secondary_identifiers":["MESH:D020274","UMLS:C0751871","DOID:438","MEDGEN:155946"],"synonyms":[{"name":"autoimmune disease of nervous system","type":"exact"},{"name":"autoimmune disease, neurologic","type":"exact"},{"name":"autoimmune diseases, nervous system","type":"exact"},{"name":"autoimmune diseases, neurologic","type":"exact"},{"name":"autoimmune disorders of the nervous system","type":"exact"},{"name":"autoimmune disorders, nervous system","type":"exact"},{"name":"autoimmune nervous system diseases","type":"exact"},{"name":"autoimmune nervous system disorder","type":"exact"},{"name":"disease, neurologic autoimmune","type":"exact"},{"name":"diseases, neurologic autoimmune","type":"exact"},{"name":"immune diseases, nervous system","type":"exact"},{"name":"immune disorders, nervous system","type":"exact"},{"name":"nervous system autoimmune disease","type":"exact"},{"name":"nervous system autoimmune diseases","type":"exact"},{"name":"nervous system hypersensitivity reaction type II disease","type":"exact"},{"name":"nervous system immune diseases","type":"exact"},{"name":"nervous system immune disorders","type":"exact"},{"name":"neurologic autoimmune disease","type":"exact"},{"name":"neurologic autoimmune diseases","type":"exact"}],"termid":"MONDO:0002977","xrefs":{"Monarch":{"xref_id":"0002977"}}}


id: PBO:0054660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2066","termid":"PBO:0054660"}


id: GO:0050553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = diphosphate + taxa-4,11-diene.","definition_xrefs":["EC:4.2.3.17","RHEA:20912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"taxadiene synthase activity","secondary_identifiers":["KEGG_REACTION:R06305","MetaCyc:4.2.3.17-RXN"],"synonyms":[{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing, taxa-4,11-diene-forming)","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing, taxadiene-forming)","type":"related"},{"name":"taxa-4(5),11(12)-diene synthase activity","type":"related"}],"termid":"GO:0050553"}


id: GO:2000163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in outflow tract morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in outflow tract morphogenesis (obsolete GO:2000163)","termid":"GO:2000163"}


id: MONDO:0017620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital sucrase-isomaltase deficiency","termid":"MONDO:0009114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"congenital sucrase-isomaltase deficiency without starch intolerance","secondary_identifiers":["Orphanet:306462"],"synonyms":[{"name":"CSID without starch intolerance","type":"exact"},{"name":"congenital sucrase-isomaltose malabsorption without starch intolerance","type":"exact"},{"name":"congenital sucrose intolerance without starch intolerance","type":"exact"},{"name":"disaccharide intolerance without starch intolerance","type":"exact"}],"termid":"MONDO:0017620","xrefs":{"Monarch":{"xref_id":"0017620"}}}


id: PBO:0004699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR61","termid":"PBO:0004699"}


id: GO:1905133
data:
  {"annotated_genes":["SJAG_01082","SJAG_01330","SJAG_01515","SJAG_04259","SJAG_03327","SJAG_04126","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105477,113631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[105478,115802,100981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[97892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[112916],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[100520],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic chromosome separation.","definition_xrefs":["PMID:15620645","GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic chromosome separation","termid":"GO:1905132"},{"relation_name":"is_a","term_name":"negative regulation of chromosome separation","termid":"GO:1905819"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromosome separation during meiosis","type":"exact"},{"name":"down regulation of meiotic chromosome resolution","type":"exact"},{"name":"down regulation of meiotic chromosome separation","type":"exact"},{"name":"down-regulation of chromosome separation during meiosis","type":"exact"},{"name":"down-regulation of meiotic chromosome resolution","type":"exact"},{"name":"down-regulation of meiotic chromosome separation","type":"exact"},{"name":"downregulation of chromosome separation during meiosis","type":"exact"},{"name":"downregulation of meiotic chromosome resolution","type":"exact"},{"name":"downregulation of meiotic chromosome separation","type":"exact"},{"name":"inhibition of chromosome separation during meiosis","type":"narrow"},{"name":"inhibition of meiotic chromosome resolution","type":"narrow"},{"name":"inhibition of meiotic chromosome separation","type":"narrow"},{"name":"negative regulation of chromosome separation during meiosis","type":"exact"},{"name":"negative regulation of meiotic chromosome resolution","type":"exact"}],"termid":"GO:1905133","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0065978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA1 related single stranded DNA binding protein, X-linked","termid":"PBO:0065978"}


id: PBO:0114316
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat containing","termid":"PBO:0114316"}


id: GO:0102326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate + H2O = 2,3-dihydroxybenzoate + 2-oxopent-4-enoate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate hydrolase activity (obsolete GO:0102326)","termid":"GO:0102326"}


id: GO:0016060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C-activating phototransduction signaling pathway. Activated rhodopsin (R*) is inactivated by a two-step process: first, R* is phosphorylated by rhodopsin kinase which lowers the activity of R*. Second, the protein arrestin binds to phosphorylated R* to de-activate it.","definition_xrefs":["PMID:8316831","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of opsin-mediated signaling pathway","termid":"GO:0016059"},{"relation_name":"is_a","term_name":"negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:1900737"},{"relation_name":"negatively_regulates","term_name":"phospholipase C-activating opsin-mediated signaling pathway","termid":"GO:0030265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipase C-activating phototransduction signaling pathway","secondary_identifiers":["Wikipedia:Visual_phototransduction"],"synonyms":[{"name":"metarhodopsin inactivation","type":"narrow"}],"termid":"GO:0016060"}


id: MONDO:0043187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary artery agenesis (obsolete MONDO:0043187)","termid":"MONDO:0043187","xrefs":{"Monarch":{"xref_id":"0043187"}}}


id: PATO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being entwined and difficult to unravel.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tangled","termid":"PATO:0001846"}


id: MOD:00068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-myristoylglycine.","definition_xrefs":["PubMed:7543369","Unimod:45#G","OMSSA:80","RESID:AA0059","PubMed:1386601","PubMed:6436247","PubMed:11955007","PubMed:11955008","PubMed:1326520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-myristoylated residue","termid":"MOD:00650"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-myristoylglycine","synonyms":[{"name":"(tetradecanoylamino)ethanoic acid","type":"exact"},{"name":"LIPID N-myristoyl glycine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"N-(1-oxotetradecyl)glycine","type":"exact"},{"name":"N-(C14:0 aliphatic acyl)glycine","type":"exact"},{"name":"N-myristoyl-glycine","type":"exact"},{"name":"N-myristoylated glycine","type":"exact"},{"name":"N-myristylglycine","type":"exact"},{"name":"N-tetradecanoylglycine","type":"exact"},{"name":"NMyrGly","type":"exact"},{"name":"ntermpepmyristoylationg","type":"exact"}],"termid":"MOD:00068"}


id: GO:0038131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neuregulin, a member of the EGF family of growth factors, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:16460914","PMID:20672328","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neuregulin receptor activity","synonyms":[{"name":"NRG receptor activity","type":"exact"},{"name":"NRG1 receptor activity","type":"narrow"},{"name":"NRG2 receptor activity","type":"narrow"}],"termid":"GO:0038131"}


id: PBO:0038452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AARSD1 pseudogene 1","termid":"PBO:0038452"}


id: GO:0002766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately leading to inhibition of an innate immune response.","definition_xrefs":["PMID:15771571","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting signal transduction","termid":"GO:0002765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"innate immune response-inhibiting signal transduction","termid":"GO:0002766"}


id: SO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_rRNA_gene","termid":"SO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_LSU_rRNA_gene","synonyms":[{"name":"cytosolic large subunit rRNA gene","type":"exact"}],"termid":"SO:0002361"}


id: GO:1904940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","GOC:bc","GOC:BHF_miRNA","PMID:23575307","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904940)","synonyms":[{"name":"down regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"down regulation of TdT","type":"related"},{"name":"down regulation of addase activity","type":"exact"},{"name":"down regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"down regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"down regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"down regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"down regulation of 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deoxynucleotidylexotransferase activity","type":"exact"},{"name":"downregulation of terminal addition enzyme activity","type":"related"},{"name":"downregulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"downregulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"downregulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"downregulation of terminal transferase activity","type":"exact"},{"name":"inhibition of DNA nucleotidylexotransferase activity","type":"narrow"},{"name":"inhibition of TdT","type":"related"},{"name":"inhibition of addase activity","type":"narrow"},{"name":"inhibition of deoxynucleotidyl terminal transferase activity","type":"narrow"},{"name":"inhibition of deoxyribonucleic acid nucleotidyltransferase activity","type":"narrow"},{"name":"inhibition of deoxyribonucleic nucleotidyltransferase activity","type":"narrow"},{"name":"inhibition of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"narrow"},{"name":"inhibition of terminal addition enzyme activity","type":"related"},{"name":"inhibition of terminal deoxynucleotide transferase activity","type":"narrow"},{"name":"inhibition of terminal deoxynucleotidyltransferase activity","type":"narrow"},{"name":"inhibition of terminal deoxyribonucleotidyltransferase activity","type":"narrow"},{"name":"inhibition of terminal transferase activity","type":"narrow"},{"name":"negative regulation of TdT","type":"related"},{"name":"negative regulation of addase activity","type":"exact"},{"name":"negative regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"negative regulation of terminal addition enzyme activity","type":"related"},{"name":"negative regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"negative regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904940"}


id: PBO:0060341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VIIA","termid":"PBO:0060341"}


id: PBO:0070096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 10 pseudogene","termid":"PBO:0070096"}


id: FYPO:0000874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000874"}


id: GO:0036295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting an increase in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to increased oxygen levels","termid":"GO:0036296"},{"relation_name":"is_a","term_name":"cellular response to oxygen levels","termid":"GO:0071453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to increased oxygen levels","synonyms":[{"name":"cellular response to raised oxygen levels","type":"exact"}],"termid":"GO:0036295"}


id: PBO:0054183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1558","termid":"PBO:0054183"}


id: PBO:0065136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent X-linked catalytic subunit","termid":"PBO:0065136"}


id: PBO:0016950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Slt1","termid":"PBO:0016950"}


id: PBO:0075488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily E member 1","termid":"PBO:0075488"}


id: MONDO:0024257
data:
  {"annotated_genes":["SJAG_03894","SJAG_01537","SJAG_03170","SJAG_04321","SJAG_02509","SJAG_00853","SJAG_03345","SJAG_02399","SJAG_00754","SJAG_02919","SJAG_01522","SJAG_02286","SJAG_00237","SJAG_01352","SJAG_03106","SJAG_04489","SJAG_02289","SJAG_03923","SJAG_02242","SJAG_03328","SJAG_03495","SJAG_04178","SJAG_04907","SJAG_00668","SJAG_04084","SJAG_07000","SJAG_04567","SJAG_01260","SJAG_00053","SJAG_02695","SJAG_04387","SJAG_02096","SJAG_01317","SJAG_00459","SJAG_05289","SJAG_03598","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85940,85941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008453"},{"annotations":[85812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[86500,84469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[86002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[86113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[84877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[84623,84624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[85738,85737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[85864,85865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[85075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008026"},{"annotations":[84483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011436"},{"annotations":[84370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011585"},{"annotations":[85969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[84550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[84403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[86243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[84573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030055"},{"annotations":[85556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957874"},{"annotations":[85246,85245,85247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[85857,85855,85856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[85541,85539,85540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[84546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[85395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[84924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[85420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[84449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"},{"annotations":[85536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[85830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[86297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[86301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[86126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[85318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"},{"annotations":[85035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014806"},{"annotations":[85034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014807"},{"annotations":[85104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859279"},{"annotations":[85413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009669"},{"annotations":[85669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009673"},{"annotations":[85275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009672"},{"annotations":[85435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010056"},{"annotations":[86490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[85502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010338"}]},"cv_name":"mondo","definition":"An instance of motor neuron disease that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron disorder","termid":"MONDO:0020128"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00237":null,"SJAG_00459":null,"SJAG_00668":null,"SJAG_00754":null,"SJAG_00853":null,"SJAG_01260":null,"SJAG_01317":null,"SJAG_01352":null,"SJAG_01522":null,"SJAG_01537":null,"SJAG_02096":null,"SJAG_02242":null,"SJAG_02286":null,"SJAG_02289":null,"SJAG_02399":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_02919":null,"SJAG_03106":null,"SJAG_03170":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03495":null,"SJAG_03598":null,"SJAG_03815":null,"SJAG_03894":null,"SJAG_03923":null,"SJAG_04084":null,"SJAG_04178":null,"SJAG_04321":null,"SJAG_04387":null,"SJAG_04489":null,"SJAG_04567":null,"SJAG_04907":null,"SJAG_05289":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary motor neuron disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:78728","Orphanet:98505","UMLS:C0270763","GARD:19478","SCTID:49793008"],"synonyms":[{"name":"genetic anterior horn cell disease","type":"exact"},{"name":"genetic motor neuron disease","type":"exact"},{"name":"hereditary motor neuron disease","type":"exact"}],"termid":"MONDO:0024257","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008025":null,"MONDO:0008026":null,"MONDO:0008453":null,"MONDO:0008458":null,"MONDO:0009669":null,"MONDO:0009672":null,"MONDO:0009673":null,"MONDO:0010043":null,"MONDO:0010056":null,"MONDO:0010190":null,"MONDO:0010338":null,"MONDO:0010459":null,"MONDO:0010532":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0011436":null,"MONDO:0011585":null,"MONDO:0011879":null,"MONDO:0012077":null,"MONDO:0012080":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0012945":null,"MONDO:0013243":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0013853":null,"MONDO:0013884":null,"MONDO:0014485":null,"MONDO:0014531":null,"MONDO:0014806":null,"MONDO:0014807":null,"MONDO:0014874":null,"MONDO:0015353":null,"MONDO:0030055":null,"MONDO:0030860":null,"MONDO:0060585":null,"MONDO:0859279":null,"MONDO:0859529":null,"MONDO:0957874":null},"xrefs":{"Monarch":{"xref_id":"0024257"}}}


id: MONDO:0010007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microbrachycephaly-ptosis-cleft lip syndrome is characterized by the association of intellectual deficit, microbrachycephaly, hypotelorism, palpebral ptosis, a thin/long face, cleft lip, and anomalies of the lumbar vertebra, sacrum and pelvis. It has been described in two Brazilian sisters. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:2511"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microbrachycephaly-ptosis-cleft lip syndrome","secondary_identifiers":["UMLS:C0796142","GARD:3596","OMIM:268850","MEDGEN:162914"],"synonyms":[{"name":"Richieri Costa-Guion Almeida-Ramos syndrome","type":"exact"},{"name":"Richieri-COSTA/Guion-Almeida syndrome","type":"related"},{"name":"microbrachycephaly ptosis cleft lip","type":"related"},{"name":"sao Paulo MCA/Mr syndrome","type":"related"},{"name":"short stature, intellectual disability, eye anomalies, and cleft Lip/palate","type":"related"},{"name":"short stature, mental retardation, eye anomalies, and cleft Lip/palate","type":"related"}],"termid":"MONDO:0010007","xrefs":{"Monarch":{"xref_id":"0010007"}}}


id: MONDO:0008229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroneal nerve, accessory deep","secondary_identifiers":["MEDGEN:358317","MESH:C536001","UMLS:C1868426","OMIM:170980"],"synonyms":[{"name":"accessory deep peroneal nerve","type":"related"},{"name":"peroneal nerve, accessory deep","type":"exact"}],"termid":"MONDO:0008229","xrefs":{"Monarch":{"xref_id":"0008229"}}}


id: GO:0110096
data:
  {"annotated_genes":["SJAG_01457","SJAG_02010","SJAG_02960","SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111864],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[104206],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[94730,102655],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldehyde stimulus.","definition_xrefs":["PMID:25656103","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_02010":null,"SJAG_02960":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to aldehyde","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110096","terms_by_termid":{"GO:0046294":null,"GO:0110095":null,"GO:0140041":null}}


id: GO:0070355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, Rab3a, and complexin II (or orthologs thereof).","definition_xrefs":["PMID:7654227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Rab3a-complexin II complex","synonyms":[{"name":"SNARE complex (STX1a, STX1b, SNAP25, RAB3a, SYT1, VAMP2, CPLX2)","type":"narrow"},{"name":"STX1a-STX1b-SNAP25-RAB3a-SYT1-VAMP2-CPLX2 complex","type":"narrow"}],"termid":"GO:0070355"}


id: GO:0034635
data:
  {"annotated_genes":["SJAG_01660","SJAG_01344","SJAG_03577","SJAG_03497","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[112269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[117327,95266,96247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[94721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034775"}]},"cv_name":"biological_process","definition":"The directed movement of glutathione, the tripeptide glutamylcysteinylglycine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"tripeptide transport","termid":"GO:0042939"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glutathione transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034635","terms_by_termid":{"GO:0034775":null,"GO:0071996":null,"GO:0098709":null,"GO:0160007":null}}


id: MONDO:0016442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"elastoma","secondary_identifiers":["MEDGEN:473177","icd11.foundation:1464650282","Orphanet:228254","UMLS:C0473583","GARD:20582","ICD9:215.9","SCTID:239140003"],"synonyms":[{"name":"Nevus elasticus","type":"exact"},{"name":"Weidman juvenile elastoma","type":"exact"},{"name":"juvenile elastoma without osteopoikilosis","type":"exact"}],"termid":"MONDO:0016442","xrefs":{"Monarch":{"xref_id":"0016442"}}}


id: GO:1990570
data:
  {"annotated_genes":["SJAG_00339"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88186],"is_not":false,"summary":null,"term":"GO:1990570"}]},"cv_name":"biological_process","definition":"The process in which GDP-mannose is transported across a membrane.","definition_xrefs":["PMID:9395539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide-sugar transmembrane transport","termid":"GO:0090480"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"GDP-mannose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015784"],"synonyms":[{"name":"GDP-mannose transport","type":"related"}],"termid":"GO:1990570","terms_by_termid":{"GO:1990570":null}}


id: GO:2001091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nigerotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nigerotriose transport","termid":"GO:2001091"}


id: GO:0005599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(X) chains; type X collagen triple helices form hexagonal networks (sheets).","definition_xrefs":["PMID:21421911","ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain collagen trimer","termid":"GO:0005598"},{"relation_name":"is_a","term_name":"sheet-forming collagen trimer","termid":"GO:0030935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type X trimer","termid":"GO:0005599"}


id: PBO:0053099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 5A","termid":"PBO:0053099"}


id: GO:0031813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y2 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"P2Y2 nucleotide receptor binding","synonyms":[{"name":"P2Y2 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031813"}


id: MONDO:0012197
data:
  {"annotated_genes":["SJAG_04491","SJAG_00487","SJAG_00640","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84544,84545,86507,86508],"is_not":false,"summary":null,"term":"MONDO:0012197"}]},"cv_name":"mondo","definition":"Aplastic anemia without a known cause.","definition_xrefs":["NCIT:C61230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired aplastic anemia","termid":"MONDO:0015610"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00487":null,"SJAG_00640":null,"SJAG_04491":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"idiopathic aplastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5836","ICD10CM:D61.3","icd11.foundation:1615519452","MESH:C538494","NANDO:2201276","NANDO:1200296","OMIM:609135","MEDGEN:87595","UMLS:C0348890","ICD10CM:D61.0","SCTID:191256002","Orphanet:88"],"synonyms":[{"name":"anaemia aplastic","type":"related"},{"name":"anemia aplastic","type":"related"},{"name":"aplastic Anemia, susceptibility to","type":"related"},{"name":"aplastic anaemia","type":"related"},{"name":"aplastic anaemia idiopathic","type":"related"},{"name":"aplastic anemia","type":"related"},{"name":"aplastic anemia idiopathic","type":"related"},{"name":"idiopathic aplastic aplasia","type":"exact"},{"name":"idiopathic bone marrow failure","type":"exact"},{"name":"secondary aplastic anaemia","type":"related"},{"name":"secondary aplastic anemia","type":"related"}],"termid":"MONDO:0012197","terms_by_termid":{"MONDO:0012197":null},"xrefs":{"Monarch":{"xref_id":"0012197"}}}


id: MONDO:0022682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cennamo gangemi syndrome","synonyms":[{"name":"hydrocephalus cataract microphthalmos","type":"related"}],"termid":"MONDO:0022682","xrefs":{"Monarch":{"xref_id":"0022682"}}}


id: PBO:0049561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 27, pseudogene","termid":"PBO:0049561"}


id: PBO:0055289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2716","termid":"PBO:0055289"}


id: GO:0035421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in innate immune response (obsolete GO:0035421)","termid":"GO:0035421"}


id: PBO:0039876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 32","termid":"PBO:0039876"}


id: MONDO:0009551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium, elevated red cell","secondary_identifiers":["UMLS:C1855464","MEDGEN:343360","OMIM:248260"],"synonyms":[{"name":"magnesium, elevated red cell","type":"exact"}],"termid":"MONDO:0009551","xrefs":{"Monarch":{"xref_id":"0009551"}}}


id: PBO:0038374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-related_via_exposure_to","termid":"PBO:0038374"}


id: PBO:0028866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mRNA_level_during_vegetative_growth","termid":"PBO:0028866"}


id: MONDO:0010191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 3 von Willebrand disease (type 3 VWD) is the most severe form of VWD characterized by a bleeding disorder associated with a total or near-total absence of Willebrand factor (von Willebrand factor; VWF) in the plasma and cellular compartments, also leading to a profound deficiency of plasmatic factor VIII (FVIII).","definition_xrefs":["Orphanet:166096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary von Willebrand disease","termid":"MONDO:0019565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease 3","secondary_identifiers":["MEDGEN:266075","NCIT:C85213","UMLS:C1264041","OMIM:277480","GARD:17025","DOID:0111054","SCTID:128108002","MESH:D056729"],"synonyms":[{"name":"VON WILLEBRAND disease, type 3","type":"related"},{"name":"VWD type 3","type":"exact"},{"name":"VWD, type 3","type":"related"},{"name":"VWD3","type":"exact"},{"name":"Von Willebrand disease, type 3","type":"related"},{"name":"von Willebrand disease 3","type":"exact"},{"name":"von Willebrand disease type 3","type":"exact"},{"name":"von Willebrand disease type III","type":"exact"},{"name":"von Willebrand's disease 3","type":"exact"},{"name":"von Willebrand's disease type 3","type":"exact"}],"termid":"MONDO:0010191","xrefs":{"Monarch":{"xref_id":"0010191"}}}


id: PBO:0050700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 13","termid":"PBO:0050700"}


id: PBO:0058855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8084","termid":"PBO:0058855"}


id: PBO:0076324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptophysin","termid":"PBO:0076324"}


id: GO:0015938
data:
  {"annotated_genes":["SJAG_02247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99036],"is_not":false,"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A metabolic process","termid":"GO:0015936"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006790","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"coenzyme A catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006765"],"synonyms":[{"name":"CoA catabolism","type":"exact"},{"name":"coenzyme A breakdown","type":"exact"},{"name":"coenzyme A catabolism","type":"exact"},{"name":"coenzyme A degradation","type":"exact"}],"termid":"GO:0015938","terms_by_termid":{"GO:0015938":null}}


id: MONDO:1011811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital melanoma, non-human animal","secondary_identifiers":["OMIA:000634"],"termid":"MONDO:1011811","xrefs":{"Monarch":{"xref_id":"1011811"}}}


id: PBO:0016961
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CDA1","termid":"PBO:0016961"}


id: PBO:0113817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine O-acetyltransferase","termid":"PBO:0113817"}


id: GO:2000707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of dense core granule biogenesis","termid":"GO:2000705"},{"relation_name":"positively_regulates","term_name":"dense core granule biogenesis","termid":"GO:0061110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of dense core granule biogenesis","termid":"GO:2000707"}


id: GO:0004066
data:
  {"annotated_genes":["SJAG_04549","SJAG_02832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101346,109935],"is_not":false,"summary":null,"term":"GO:0004066"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate.","definition_xrefs":["RHEA:12228","EC:6.3.5.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"asparagine synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ASNSYNB-RXN","Reactome:R-HSA-70599"],"synonyms":[{"name":"AS","type":"related"},{"name":"AS-B activity","type":"related"},{"name":"L-aspartate:L-glutamine amido-ligase (AMP-forming)","type":"related"},{"name":"asparagine synthase (glutamine-hydrolysing)","type":"related"},{"name":"asparagine synthetase (glutamine-hydrolysing)","type":"related"},{"name":"asparagine synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"asparagine synthetase B activity","type":"related"},{"name":"glutamine-dependent asparagine synthetase activity","type":"related"}],"termid":"GO:0004066","terms_by_termid":{"GO:0004066":null}}


id: PATO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000353 secondary product composition value (obsolete PATO:0000353)","termid":"PATO:0000353"}


id: GO:0015425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + nonpolar amino acid(out) = ADP + phosphate + nonpolar amino acid(in).","definition_xrefs":["EC:7.4.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type amino acid transporter activity","termid":"GO:0015424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled nonpolar-amino acid transporter activity","secondary_identifiers":["TC:3.A.1.4.1","MetaCyc:3.6.3.22-RXN"],"synonyms":[{"name":"ATP-dependent nonpolar-amino acid transporter activity","type":"exact"},{"name":"leucine/isoleucine/valine porter activity","type":"related"},{"name":"nonpolar amino acid-transporting ATPase activity","type":"exact"},{"name":"nonpolar-amino acid ABC transporter","type":"exact"},{"name":"nonpolar-amino acid-transporting ATPase activity","type":"exact"},{"name":"nonpolar-amino-acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0015425"}


id: GO:0035544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of assembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of SNARE complex assembly","termid":"GO:0035542"},{"relation_name":"negatively_regulates","term_name":"SNARE complex assembly","termid":"GO:0035493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0016192","GO:0065003","GO:0008150","GO:0006810","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"negative regulation of SNARE complex assembly","termid":"GO:0035544"}


id: PBO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member B","termid":"PBO:0046936"}


id: PBO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute myeloid leukemia","termid":"PBO:0001866"}


id: SO:0000099
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from proviral sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"proviral_location","termid":"SO:0000751"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proviral_gene","synonyms":[{"name":"proviral gene","type":"exact"}],"termid":"SO:0000099"}


id: PR:O13326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetylhomoserine (thiol)-lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.11","synonyms":[{"name":"O-acetylhomoserine sulfhydrylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OAH sulfhydrylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-met17","type":"exact"},{"name":"homocysteine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13326"}


id: FYPO:0000918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal citrate (Si)-synthase activity","termid":"FYPO:0000917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased citrate (Si)-synthase activity","synonyms":[{"name":"decreased citrate synthase activity","type":"broad"},{"name":"reduced citrate (Si)-synthase activity","type":"exact"}],"termid":"FYPO:0000918"}


id: PBO:0085932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; completely overlaps the verified gene YJL077C/ICS3","termid":"PBO:0085932"}


id: MONDO:0958202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Moyamoya disease","termid":"MONDO:0016820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moyamoya disease 7","secondary_identifiers":["OMIM:620687","MEDGEN:1851566","UMLS:C5882748"],"termid":"MONDO:0958202","xrefs":{"Monarch":{"xref_id":"0958202"}}}


id: PBO:0079341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 25, pseudogene","termid":"PBO:0079341"}


id: GO:0110053
data:
  {"annotated_genes":["SJAG_03086","SJAG_01894","SJAG_04479","SJAG_00279","SJAG_02700","SJAG_01993","SJAG_00521","SJAG_04522","SJAG_02566","SJAG_04100","SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87468,98093,91527,113451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[90082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[106772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[101924,100934,89886,89034,104329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament organization.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of actin filament organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110053","terms_by_termid":{"GO:0030833":null,"GO:0032231":null,"GO:0034316":null,"GO:0051016":null}}


id: GO:0090161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi ribbon formation","termid":"GO:0090161"}


id: MONDO:0700191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrosarcoma that occurs in a chicken.","definition_xrefs":["NCIT:C134557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"chicken neoplasm","termid":"MONDO:0700189"},{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chicken fibrosarcoma","termid":"MONDO:0700191","xrefs":{"Monarch":{"xref_id":"0700191"}}}


id: PBO:0066054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2C antisense RNA 1","termid":"PBO:0066054"}


id: PBO:0017037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR93","termid":"PBO:0017037"}


id: MONDO:0015745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-polymicrogyria-corpus callosum agenesis syndrome is a rare, genetic, central nervous system malformation syndrome characterized by marked prenatal-onset microcephaly, severe motor delay with hypotonia, bilateral polymicrogyria, corpus callosum agenesis, ventricular dilation, small cerebellum and early lethality.","definition_xrefs":["Orphanet:171703"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-polymicrogyria-corpus callosum agenesis syndrome","secondary_identifiers":["GARD:20125","MEDGEN:1653942","UMLS:C4750772"],"termid":"MONDO:0015745","xrefs":{"Monarch":{"xref_id":"0015745"}}}


id: PBO:0057958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-2","termid":"PBO:0057958"}


id: MONDO:0011165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fibronectin glomerulopathy in which the cause of the disease is a mutation in the FN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibronectin glomerulopathy","termid":"MONDO:0007671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"glomerulopathy with fibronectin deposits 2","secondary_identifiers":["UMLS:C1866075","MEDGEN:356149","SCTID:722759007","OMIM:601894","GARD:9914"],"synonyms":[{"name":"FN1 fibronectin glomerulopathy","type":"exact"},{"name":"GFND2","type":"related"},{"name":"fibronectin glomerulopathy","type":"related"},{"name":"fibronectin glomerulopathy caused by mutation in FN1","type":"exact"},{"name":"glomerular nephritis familial with fibronectin deposits","type":"related"},{"name":"glomerular nephritis, familial, with fibronectin deposits","type":"related"},{"name":"glomerulopathy with fibronectin deposits 2","type":"exact"},{"name":"glomerulopathy with fibronectin deposits type 2","type":"exact"}],"termid":"MONDO:0011165","xrefs":{"Monarch":{"xref_id":"0011165"}}}


id: GO:0043496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:jl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein homodimerization activity","termid":"GO:0043496"}


id: PBO:0089903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin, Flo11-related","termid":"PBO:0089903"}


id: PBO:0088750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-60S shuttling factor Alb1","termid":"PBO:0088750"}


id: GO:0006495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete terminal O-glycosylation (obsolete GO:0006495)","synonyms":[{"name":"terminal O-glycosylation","type":"exact"}],"termid":"GO:0006495"}


id: FYPO:0002267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal glutamate-ammonia ligase activity","synonyms":[{"name":"abnormal GS activity","type":"exact"},{"name":"abnormal glutamine synthetase activity","type":"exact"},{"name":"abnormal glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"FYPO:0002267"}


id: MONDO:0015826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spondylocostal dysostosis is a very rare and mild form of spondylocostal dysostosis characterized by vertebral and costal segmentation defects, often with a reduction in the number of ribs.","definition_xrefs":["Orphanet:1797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylocostal dysostosis","termid":"MONDO:0000359"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"autosomal dominant spondylocostal dysostosis","secondary_identifiers":["GARD:12806","MEDGEN:902919","SCTID:716232002","UMLS:C4274761"],"synonyms":[{"name":"autosomal dominant spondylocostal dysplasia","type":"exact"},{"name":"spondylocostal dysostosis, autosomal dominant","type":"exact"}],"termid":"MONDO:0015826","xrefs":{"Monarch":{"xref_id":"0015826"}}}


id: PBO:0042334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD63 molecule","termid":"PBO:0042334"}


id: PBO:0090157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd1","termid":"PBO:0090157"}


id: GO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.","definition_xrefs":["GOC:dph","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune system development","termid":"GO:0002520"}


id: PBO:0079028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-1","termid":"PBO:0079028"}


id: GO:0071855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide receptor.","definition_xrefs":["GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuropeptide receptor binding","termid":"GO:0071855"}


id: MONDO:1011845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, non-human animal","secondary_identifiers":["OMIA:000527"],"termid":"MONDO:1011845","xrefs":{"Monarch":{"xref_id":"1011845"}}}


id: PBO:0041325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 76","termid":"PBO:0041325"}


id: GO:0030232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex that binds to the insulin control element (ICE), a DNA sequence element found within the 5'-flanking region of the insulin gene, and activates ICE-mediated transcription.","definition_xrefs":["PMID:7935390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"insulin control element activator complex","synonyms":[{"name":"ICE activator complex","type":"exact"}],"termid":"GO:0030232"}


id: GO:0008354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell migration","synonyms":[{"name":"germ-cell migration","type":"exact"},{"name":"pole cell migration","type":"narrow"},{"name":"primordial germ cell migration","type":"related"}],"termid":"GO:0008354"}


id: PBO:0074407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM11 pseudogene 1","termid":"PBO:0074407"}


id: MONDO:0031008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 24","secondary_identifiers":["Orphanet:567548","GARD:18003","UMLS:C5543267","OMIM:619263","MEDGEN:1781068"],"synonyms":[{"name":"NPHS24","type":"exact"},{"name":"idiopathic SRNS","type":"exact"},{"name":"idiopathic steroid-resistant nephrotic syndrome","type":"exact"}],"termid":"MONDO:0031008","xrefs":{"Monarch":{"xref_id":"0031008"}}}


id: MONDO:0003570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma characterized by the presence of malignant epithelial cells with clear cytoplasm which contains neutral lipids. A representative example is the lipid-rich breast carcinoma.","definition_xrefs":["NCIT:C4152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lipid-rich carcinoma","secondary_identifiers":["MEDGEN:137742","DOID:5658","ICDO:8314/3","UMLS:C0334318"],"synonyms":[{"name":"lipid-rich carcinoma","type":"exact"},{"name":"lipid-rich carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003570","xrefs":{"Monarch":{"xref_id":"0003570"}}}


id: GO:0009065
data:
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id: PBO:0066013
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanine-7 methyltransferase activating subunit like","termid":"PBO:0066013"}


id: GO:0051894
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id: PBO:0063077
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase gamma","termid":"PBO:0063077"}


id: PBO:0060566
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 2, pseudogene","termid":"PBO:0060566"}


id: PBO:0062470
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 161 pseudogene","termid":"PBO:0062470"}


id: PBO:0086527
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id: PBO:0059228
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 9","termid":"PBO:0059228"}


id: MONDO:0007298
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id: PBO:0058386
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4758","termid":"PBO:0058386"}


id: PBO:0055991
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich transmembrane and O-methyltransferase domain containing","termid":"PBO:0055991"}


id: PBO:0066885
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 185","termid":"PBO:0066885"}


id: GO:0035162
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id: PBO:0089797
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id: GO:0021802
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id: PBO:0063164
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX8 antisense RNA 1","termid":"PBO:0063164"}


id: PBO:0074945
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 109B","termid":"PBO:0074945"}


id: PBO:0059029
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id: PBO:0067240
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 311, pseudogene","termid":"PBO:0067240"}


id: FYPO:0005200
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id: GO:0009223
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id: GO:0006839
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id: MONDO:0021977
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id: MONDO:0015610
data:
  {"annotated_genes":["SJAG_04491","SJAG_00487","SJAG_04881","SJAG_00846","SJAG_00640","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86507,86508,84545,84544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012197"},{"annotations":[86134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[85188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"An instance of aplastic anemia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aplastic anemia","termid":"MONDO:0015909"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00487":null,"SJAG_00640":null,"SJAG_00846":null,"SJAG_04491":null,"SJAG_04881":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"acquired aplastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2201277","Orphanet:164823","SCTID:55907008","UMLS:C0271907","GARD:20058","MEDGEN:543648"],"synonyms":[{"name":"acquired aplastic anemia","type":"exact"},{"name":"rare acquired aplastic anaemia","type":"related"},{"name":"rare acquired aplastic anemia","type":"related"}],"termid":"MONDO:0015610","terms_by_termid":{"MONDO:0010438":null,"MONDO:0012197":null,"MONDO:0014166":null},"xrefs":{"Monarch":{"xref_id":"0015610"}}}


id: PBO:0052553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor D1","termid":"PBO:0052553"}


id: FYPO:0002019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere length during vegetative growth","termid":"FYPO:0006464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"elongated telomeres during vegetative growth","synonyms":[{"name":"elongated telomeres during mitotic cell cycle","type":"related"},{"name":"increased telomere length during vegetative growth","type":"exact"},{"name":"long telomeres during vegetative growth","type":"exact"}],"termid":"FYPO:0002019"}


id: MONDO:0008500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striae distensae, familial","secondary_identifiers":["MEDGEN:348875","OMIM:185200","MESH:C566104","UMLS:C1861447"],"synonyms":[{"name":"striae distensae, familial","type":"exact"}],"termid":"MONDO:0008500","xrefs":{"Monarch":{"xref_id":"0008500"}}}


id: PBO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.36","termid":"PBO:0001114"}


id: GO:0098903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane repolarization during an action potential. Membrane repolarization is the process in which membrane potential changes in the repolarizing direction, towards the resting potential.","definition_xrefs":["GOC:dph","GOC:dos","ISBN:978-0-07-139011-8","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane repolarization","termid":"GO:0060306"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"membrane repolarization during action potential","termid":"GO:0086011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane repolarization during action potential","termid":"GO:0098903"}


id: MONDO:0100403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly loss of chromosome 17p. (A cytogenetic abnormality that refers to the loss of all or part of the short arm of chromosome 17 (17p).)","definition_xrefs":["NCIT:C36499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, loss of chromosome 17p","synonyms":[{"name":"AML, del(17p)","type":"exact"},{"name":"AML, loss of chromosome 17p","type":"exact"}],"termid":"MONDO:0100403","xrefs":{"Monarch":{"xref_id":"0100403"}}}


id: GO:1902780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonane stimulus.","definition_xrefs":["GOC:mengo_curators","GO_REF:0000071","PMID:22958739","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonane","termid":"GO:1902780"}


id: MONDO:0022037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant lymphoma characterized by the presence of immunoblasts with uniformly round-to-oval nuclei, one or more prominent nucleoli, and abundant cytoplasm. This class may be subdivided into plasmacytoid and clear-cell types based on cytoplasmic characteristics. A third category, pleomorphous, may be analogous to some of the peripheral T-cell lymphomas (LYMPHOMA, T-CELL, PERIPHERAL) recorded in both the United States and Japan.","definition_xrefs":["MESH:D016400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"large-cell immunoblastic lymphoma","secondary_identifiers":["UMLS:C0079746","GARD:8219","MEDGEN:86955"],"synonyms":[{"name":"Diffuse Immunoblastic Lymphosarcoma","type":"related"},{"name":"Diffuse Immunoblastic Lymphosarcomas","type":"related"},{"name":"Diffuse non-Hodgkin lymphoma, immunoblastic","type":"related"},{"name":"Diffuse non-Hodgkin's immunoblastic (diffuse) lymphoma","type":"related"},{"name":"Diffuse non-Hodgkin's lymphoma, immunoblastic","type":"related"},{"name":"Diffuse non-Hodgkin's lymphoma, immunoblastic (clinical)","type":"related"},{"name":"IMMUNOBLASTIC LARGE LYMPHOMA","type":"related"},{"name":"Immunoblastic Large Cell Lymphoma","type":"related"},{"name":"Immunoblastic Large-Cell Lymphoma","type":"related"},{"name":"Immunoblastic Large-Cell Lymphomas","type":"related"},{"name":"Immunoblastic Lymphoma","type":"related"},{"name":"Immunoblastic Lymphoma, Large-Cell","type":"related"},{"name":"Immunoblastic Lymphomas, Large-Cell","type":"related"},{"name":"Immunoblastic Lymphosarcoma, Diffuse","type":"related"},{"name":"Immunoblastic Lymphosarcomas, Diffuse","type":"related"},{"name":"Immunoblastic Sarcoma","type":"related"},{"name":"Immunoblastic Sarcomas","type":"related"},{"name":"Immunoblastic malignant lymphoma - large cell","type":"related"},{"name":"Immunoblastoma","type":"related"},{"name":"Immunoblastomas","type":"related"},{"name":"LARGE IMMUNOBLASTIC LYMPHOMA","type":"related"},{"name":"LYMPHOMA IMMUNOBLASTIC LARGE","type":"related"},{"name":"LYMPHOMA LARGE IMMUNOBLASTIC","type":"related"},{"name":"Large Cell Immunoblastic Lymphoma","type":"related"},{"name":"Large cell immunoblastic lymphoma","type":"related"},{"name":"Large-Cell Immunoblastic Lymphoma","type":"related"},{"name":"Large-Cell Immunoblastic Lymphomas","type":"related"},{"name":"Large-Cell Lymphoma, Immunoblastic","type":"related"},{"name":"Large-Cell Lymphomas, Immunoblastic","type":"related"},{"name":"Lymphoma, Immunoblastic Large-Cell","type":"related"},{"name":"Lymphoma, Immunoblastic, Large Cell","type":"related"},{"name":"Lymphoma, Immunoblastic, Large-Cell","type":"related"},{"name":"Lymphoma, Large Cell, Immunoblastic","type":"related"},{"name":"Lymphoma, Large-Cell Immunoblastic","type":"related"},{"name":"Lymphoma, Large-Cell, Immunoblastic","type":"related"},{"name":"Lymphoma, immunoblastic, high grade","type":"related"},{"name":"Lymphomas, Immunoblastic Large-Cell","type":"related"},{"name":"Lymphomas, Large-Cell Immunoblastic","type":"related"},{"name":"Lymphosarcoma, Diffuse Immunoblastic","type":"related"},{"name":"Lymphosarcomas, Diffuse Immunoblastic","type":"related"},{"name":"Malignant lymphoma - immunoblastic","type":"related"},{"name":"Sarcoma, Immunoblastic","type":"related"},{"name":"Sarcomas, Immunoblastic","type":"related"}],"termid":"MONDO:0022037","xrefs":{"Monarch":{"xref_id":"0022037"}}}


id: GO:0043847
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimer composed of the chi and psi subunits which is a subassembly of the DNA polymerase III clamp loader complex and serves as a bridge between the DnaX complex and the single-stranded DNA-binding protein (SSB).","definition_xrefs":["PMID:12940977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"DNA polymerase III, clamp loader complex","termid":"GO:0043846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase III, clamp loader chi/psi subcomplex","synonyms":[{"name":"DNA polymerase III, DnaX complex, chi/psi subcomplex","type":"exact"}],"termid":"GO:0043847"}


id: PR:O74945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Tu GTP-binding domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04255","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.08c","secondary_identifiers":["UniProtKB:O74945"],"synonyms":[{"name":"EF-2 like GTPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EFTUD1","type":"exact"},{"name":"elongation factor-like 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74945"}


id: PBO:0031001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mercaptoethanol","termid":"PBO:0031001"}


id: PBO:0067544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 690, pseudogene","termid":"PBO:0067544"}


id: GO:1903509
data:
  {"annotated_genes":["SJAG_04975","SJAG_03672","SJAG_03878","SJAG_03506","SJAG_02913","SJAG_01416","SJAG_03801","SJAG_06425","SJAG_04878","SJAG_02168","SJAG_04337","SJAG_02523","SJAG_02776","SJAG_01227","SJAG_01570","SJAG_06383","SJAG_03066","SJAG_03115","SJAG_00295","SJAG_04119","SJAG_05327","SJAG_04924","SJAG_00846","SJAG_00068","SJAG_03292","SJAG_00506","SJAG_03953","SJAG_05311","SJAG_02488","SJAG_00831","SJAG_05278","SJAG_04165","SJAG_01860","SJAG_04913","SJAG_04881","SJAG_02804"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102889,99413,92728,99479,109079,100790,102951,90602,88135,113072,97297,106706,90429,97858,92284,110742,93711,87863,98065,115269,116366,111493,107736,91428,92195,102218,113920,86653,88759,114345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[96697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[94447,111671,91005,94927,89946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[91006,111672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006675"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving liposaccharide.","definition_xrefs":["GOC:dph","GO_REF:0000068","GOC:TermGenie","PMID:9452964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"liposaccharide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"liposaccharide metabolism","type":"exact"}],"termid":"GO:1903509","terms_by_termid":{"GO:0006506":null,"GO:0006675":null,"GO:0006676":null,"GO:0051999":null}}


id: GO:0160166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoadipate + H+ + N(6)-[(R)-lipoyl]-L-lysyl-[dihydrolipoyllysine-residue succinyltransferase] = CO2 + N(6)-[(R)-S(8)-glutaryldihydrolipoyl]-L-lysyl-[dihydrolipoyllysine-residue succinyltransferase].","definition_xrefs":["PMID:29191460","PMID:32695416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-oxoadipate dehydrogenase activity","secondary_identifiers":["RHEA:69576"],"termid":"GO:0160166"}


id: GO:1902796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snoRNA processing.","definition_xrefs":["GOC:TermGenie","PMID:24210919","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of snoRNA metabolic process","termid":"GO:1903323"},{"relation_name":"regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0010467","GO:0016074","GO:0008150"],"is_obsolete":false,"name":"regulation of snoRNA processing","termid":"GO:1902796"}


id: GO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of T cells in the thymus.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central T cell tolerance induction","synonyms":[{"name":"central T lymphocyte tolerance induction","type":"exact"},{"name":"central T-cell tolerance induction","type":"exact"},{"name":"central T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002512"}


id: MONDO:0020081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete macrophage or histiocytic tumor (obsolete MONDO:0020081)","secondary_identifiers":["Orphanet:98288"],"termid":"MONDO:0020081","xrefs":{"Monarch":{"xref_id":"0020081"}}}


id: PBO:0028285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cytoplasm_during_glucose_starvation","termid":"PBO:0028285"}


id: MONDO:0003954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiokeratoma that is located on the scrotum or vulva.","direct_ancestors":[{"relation_name":"is_a","term_name":"angiokeratoma","termid":"MONDO:0003143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angiokeratoma of Fordyce","secondary_identifiers":["SCTID:6331000","UMLS:C0263639","DOID:664","icd11.foundation:410953318","MEDGEN:75529"],"synonyms":[{"name":"Fordyce angiokeratoma","type":"exact"},{"name":"Fordyce's spot","type":"exact"},{"name":"Fordyce-type angiokeratoma of scrotum","type":"narrow"}],"termid":"MONDO:0003954","xrefs":{"Monarch":{"xref_id":"0003954"}}}


id: PBO:0063548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmanylethanolamine desaturase 1","termid":"PBO:0063548"}


id: PBO:0005329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xrcc4 like factor, cernunnon","termid":"PBO:0005329"}


id: PBO:0056727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm development LRP chaperone","termid":"PBO:0056727"}


id: PBO:0000519
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.10.1","termid":"PBO:0000519"}


id: PBO:0062082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 13 pseudogene","termid":"PBO:0062082"}


id: PBO:0088534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGI-48 family Utp18","termid":"PBO:0088534"}


id: PBO:0053513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 501","termid":"PBO:0053513"}


id: PBO:0054236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1618","termid":"PBO:0054236"}


id: MOD:01808
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-leucine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated leucine","termid":"MOD:00662"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated leucine","synonyms":[{"name":"MeLeu","type":"exact"}],"termid":"MOD:01808"}


id: PBO:0045337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 10","termid":"PBO:0045337"}


id: PBO:0070083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 40, pseudogene","termid":"PBO:0070083"}


id: GO:0140741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: ATP + [ThiI sulfur-carrier protein]-S-sulfanyl-L-cysteine + uracil in tRNA + 2 reduced ferredoxin [iron-sulfur] cluster = AMP + diphosphate + 4-thiouracil in tRNA + [ThiI sulfur-carrier protein]-L-cysteine + 2 oxidized ferredoxin [iron-sulfur] cluster.","definition_xrefs":["PMID:5541999","RHEA:24176","PMID:27791189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0016782","GO:0016740","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"tRNA-uracil-4 sulfurtransferase activity","secondary_identifiers":["EC:2.8.1.4","MetaCyc:RXN-18388"],"synonyms":[{"name":"tRNA U4 sulfurtransferase","type":"exact"},{"name":"tRNA uracil 4 sulfurtransferase","type":"exact"},{"name":"tRNA uracil 4-sulfurtransferase","type":"exact"}],"termid":"GO:0140741"}


id: FYPO:0008338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' ends of non-polyadenylated RNA molecules occurs to a higher extent than normal.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA modification","termid":"FYPO:0000374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"increased 3' end uridylation of non-polyadenylated RNA","termid":"FYPO:0008338"}


id: PBO:0076131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 2","termid":"PBO:0076131"}


id: GO:0015611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-ribose(out) = ADP + phosphate + D-ribose(in).","definition_xrefs":["RHEA:29903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"},{"relation_name":"is_a","term_name":"D-ribose transmembrane transporter activity","termid":"GO:0015591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type D-ribose transporter activity","secondary_identifiers":["MetaCyc:ABC-28-RXN","EC:7.5.2.7"],"synonyms":[{"name":"D-ribose porter activity","type":"broad"},{"name":"D-ribose-importing ATPase activity","type":"related"}],"termid":"GO:0015611"}


id: GO:0071222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipopolysaccharide","termid":"GO:0032496"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipopolysaccharide","synonyms":[{"name":"cellular response to LPS","type":"exact"},{"name":"cellular response to endotoxin","type":"broad"}],"termid":"GO:0071222"}


id: PBO:0028778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028778"}


id: GO:0009474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nonaheme cytochrome c (obsolete GO:0009474)","synonyms":[{"name":"nonaheme cytochrome c","type":"exact"}],"termid":"GO:0009474"}


id: GO:0072743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an erythromycin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to erythromycin","termid":"GO:1901323"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to erythromycin","termid":"GO:0072743"}


id: PR:O74397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine synthetase domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03385","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase domain-containing protein C4F6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.11c","secondary_identifiers":["UniProtKB:O74397"],"synonyms":[{"name":"Spom972h-ASNSD1","type":"exact"}],"termid":"PR:O74397"}


id: GO:0015794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glycerol-3-phosphate is transported across a membrane. Glycerol-3-phosphate is a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"glycerol-3-phosphate transmembrane transport","synonyms":[{"name":"glycerol-3-phosphate transport","type":"related"}],"termid":"GO:0015794"}


id: PBO:0088227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L8/L2","termid":"PBO:0088227"}


