# terms

id: GO:0046711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009180"},{"relation_name":"is_a","term_name":"GDP metabolic process","termid":"GO:0046710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GDP biosynthetic process","synonyms":[{"name":"GDP anabolism","type":"exact"},{"name":"GDP biosynthesis","type":"exact"},{"name":"GDP formation","type":"exact"},{"name":"GDP synthesis","type":"exact"}],"termid":"GO:0046711"}


id: PBO:0030328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity","termid":"PBO:0030328"}


id: PBO:0059723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 31","termid":"PBO:0059723"}


id: PBO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc2","termid":"PBO:0002477"}


id: PBO:0077529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM242 divergent transcript","termid":"PBO:0077529"}


id: GO:0047596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylsalicylate + H+ = 3-cresol + CO2.","definition_xrefs":["RHEA:23112","EC:4.1.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6-methylsalicylate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03567","MetaCyc:6-METHYLSALICYLATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"6-MSA decarboxylase activity","type":"related"},{"name":"6-methylsalicylate carboxy-lyase (3-cresol-forming)","type":"related"},{"name":"6-methylsalicylate carboxy-lyase activity","type":"related"},{"name":"6-methylsalicylic acid (2,6-cresotic acid) decarboxylase activity","type":"related"}],"termid":"GO:0047596"}


id: GO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronate = D-fructuronate. Also converts D-galacturonate to D-tagaturonate.","definition_xrefs":["EC:5.3.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronate isomerase activity","secondary_identifiers":["MetaCyc:GLUCUROISOM-RXN"],"synonyms":[{"name":"D-glucuronate aldose-ketose-isomerase activity","type":"related"},{"name":"D-glucuronate isomerase activity","type":"related"},{"name":"D-glucuronate ketol-isomerase activity","type":"related"},{"name":"uronate isomerase activity","type":"related"},{"name":"uronic acid isomerase activity","type":"related"},{"name":"uronic isomerase activity","type":"related"}],"termid":"GO:0008880"}


id: PBO:0088384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial N(5)-glutamine methyltransferase","termid":"PBO:0088384"}


id: PBO:0112873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lincRNA regulator of IL2RA","termid":"PBO:0112873"}


id: FYPO:0004359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic cell cycle DNA replication checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["GO:0033314","PMID:11988741","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abolished mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0004359"}


id: GO:1905404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905402"},{"relation_name":"positively_regulates","term_name":"activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905404"}


id: MONDO:0000455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited ocular disorder characterized by the loss of cone cells, the photoreceptors responsible for both central and color vision.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone dystrophy","secondary_identifiers":["NANDO:1200936","SCTID:312917007","UMLS:C0730290","MEDGEN:676499","Orphanet:1871","ICD9:362.75","DOID:0050795","GARD:11897","MESH:D000077765","NORD:991"],"synonyms":[{"name":"cone dystrophy","type":"exact"},{"name":"progressive cone dystrophy","type":"narrow"},{"name":"retinal cone dystrophy","type":"related"},{"name":"stationary cone dystrophy","type":"narrow"}],"termid":"MONDO:0000455","xrefs":{"Monarch":{"xref_id":"0000455"}}}


id: PBO:0059439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A8","termid":"PBO:0059439"}


id: MONDO:0012570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Body skin hyperlaxity due to vitamin K-dependent coagulation factor deficiency is a very rare genetic skin disease characterized by severe skin laxity affecting the trunk and limbs.","definition_xrefs":["Orphanet:91135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"body skin hyperlaxity due to vitamin K-dependent coagulation factor deficiency","secondary_identifiers":["GARD:16796","MESH:C563654","OMIM:610842","SCTID:717941005","UMLS:C1835813","MEDGEN:332067"],"synonyms":[{"name":"PXE-like disorder with multiple coagulation Factor deficiency","type":"related"},{"name":"PXE-like syndrome","type":"exact"},{"name":"pseudoxanthoma elasticum-like disorder with multiple coagulation factor deficiency","type":"related"},{"name":"pseudoxanthoma elasticum-like syndrome","type":"exact"}],"termid":"MONDO:0012570","xrefs":{"Monarch":{"xref_id":"0012570"}}}


id: PBO:0043332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal liver metastasis associated transcript 3","termid":"PBO:0043332"}


id: SO:0001380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_isopentenylaminomethyl_uridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_isopentenylaminomethyl_uridine","secondary_identifiers":["RNAMOD:103"],"synonyms":[{"name":"5-(isopentenylaminomethyl)uridine","type":"exact"},{"name":"five isopentenylaminomethyl uridine","type":"exact"},{"name":"inm5U","type":"exact"}],"termid":"SO:0001380"}


id: PBO:0028690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore-specific_spindle_pole_body_remodeling","termid":"PBO:0028690"}


id: SO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA synthesized on a DNA or RNA template by an RNA polymerase.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"},{"relation_name":"overlaps","term_name":"unit_of_gene_expression","termid":"SO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript","secondary_identifiers":["http://en.wikipedia.org/wiki/RNA"],"synonyms":[{"name":"INSDC_feature:misc_RNA","type":"broad"}],"termid":"SO:0000673"}


id: GO:0071339
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3. MLL1/MLL is the catalytic methyltransferase subunit, and the complex also contains the core components ASH2L, HCFC1/HCF1 WDR5 and RBBP5.","definition_xrefs":["GOC:sp","PMID:15960975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MLL1/2 complex","termid":"GO:0044665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005654"],"is_obsolete":false,"name":"MLL1 complex","termid":"GO:0071339"}


id: MONDO:1010659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombocytopenia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, non-human animal","termid":"MONDO:1010080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, dog","secondary_identifiers":["OMIA:001001-9615"],"termid":"MONDO:1010659","xrefs":{"Monarch":{"xref_id":"1010659"}}}


id: PBO:0066936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 238","termid":"PBO:0066936"}


id: PBO:0005496
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts detected","termid":"PBO:0005496"}


id: PBO:0005485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf11","termid":"PBO:0005485"}


id: GO:1905952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid localization.","definition_xrefs":["GO_REF:0000058","PMID:17564681","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid localization","synonyms":[{"name":"regulation of lipid localisation","type":"exact"}],"termid":"GO:1905952"}


id: PBO:0065883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB33A, member RAS oncogene family","termid":"PBO:0065883"}


id: PBO:0030070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamine_import","termid":"PBO:0030070"}


id: GO:0034861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzothiazole-2-sulfonate + H2O = 2-hydroxybenzothiazole + HSO3-.","definition_xrefs":["UM-BBD_reactionID:r1290"],"gene_count":0,"genotype_count":0,"name":"obsolete benzothiazole-2-sulfonate hydrolase activity (obsolete GO:0034861)","termid":"GO:0034861"}


id: GO:0046360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-oxobutyrate, the anion of the organic acid 2-oxobutyric acid, which contains a ketone group on carbon 2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxobutyrate metabolic process","termid":"GO:0046361"},{"relation_name":"is_a","term_name":"short-chain fatty acid biosynthetic process","termid":"GO:0051790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"2-oxobutyrate biosynthetic process","synonyms":[{"name":"2-oxobutyrate anabolism","type":"exact"},{"name":"2-oxobutyrate biosynthesis","type":"exact"},{"name":"2-oxobutyrate formation","type":"exact"},{"name":"2-oxobutyrate synthesis","type":"exact"},{"name":"alpha-ketobutyrate biosynthesis","type":"exact"},{"name":"alpha-ketobutyrate biosynthetic process","type":"exact"}],"termid":"GO:0046360"}


id: GO:0039647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host poly(A)-binding protein (PABP) activity. PABP binds to the poly(A) tail of mRNA to facilitate translation.","definition_xrefs":["UniProtKB-KW:KW-1101"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host poly(A)-binding protein activity (obsolete GO:0039647)","synonyms":[{"name":"inhibition of host poly(A)-binding protein by virus","type":"exact"},{"name":"suppression by virus of host PABP activity","type":"exact"}],"termid":"GO:0039647"}


id: MONDO:0011184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"specific language disorder","termid":"MONDO:0016226"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood apraxia of speech","secondary_identifiers":["GARD:12889","Orphanet:209908","icd11.foundation:1590154825","ICD9:315.39","MEDGEN:152917","OMIM:602081","DOID:0111275","SCTID:229703009","UMLS:C0750927"],"synonyms":[{"name":"CAS","type":"exact"},{"name":"SPCH1","type":"related"},{"name":"articulatory apraxia","type":"related"},{"name":"childhood apraxia of speech","type":"exact"},{"name":"das","type":"related"},{"name":"developmental apraxia of speech","type":"related"},{"name":"developmental verbal apraxia","type":"related"},{"name":"developmental verbal dyspraxia","type":"exact"},{"name":"speech and language disorder with orofacial dyspraxia","type":"exact"},{"name":"speech-language disorder 1","type":"related"},{"name":"speech-language disorder type 1","type":"exact"},{"name":"speech-language disorder-1","type":"related"}],"termid":"MONDO:0011184","xrefs":{"Monarch":{"xref_id":"0011184"}}}


id: PBO:0012862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 3'-5' exonuclease for RNA 3' ss-tail","termid":"PBO:0012862"}


id: MONDO:0009164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, axonal, with necrotizing myopathy, cardiomyopathy, and cataracts","secondary_identifiers":["UMLS:C1856990","MESH:C565596","OMIM:225740","MEDGEN:341669"],"synonyms":[{"name":"Lyon syndrome","type":"related"},{"name":"encephalopathy, axonal, with necrotizing myopathy, cardiomyopathy, and cataracts","type":"exact"}],"termid":"MONDO:0009164","xrefs":{"Monarch":{"xref_id":"0009164"}}}


id: PBO:0082959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function","termid":"PBO:0082959"}


id: PBO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBPL divergent transcript","termid":"PBO:0061603"}


id: GO:0035306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of removal of phosphate groups from a molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"positively_regulates","term_name":"dephosphorylation","termid":"GO:0016311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dephosphorylation","synonyms":[{"name":"activation of dephosphorylation","type":"narrow"},{"name":"stimulation of dephosphorylation","type":"narrow"},{"name":"up regulation of dephosphorylation","type":"exact"},{"name":"up-regulation of dephosphorylation","type":"exact"},{"name":"upregulation of dephosphorylation","type":"exact"}],"termid":"GO:0035306"}


id: GO:0008447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 L-ascorbate + O2 = 4 monodehydroascorbate + 2 H2O.","definition_xrefs":["RHEA:30243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-ascorbate oxidase activity","secondary_identifiers":["EC:1.10.3.3","MetaCyc:RXN-3541"],"synonyms":[{"name":"AA oxidase activity","type":"related"},{"name":"AAO","type":"related"},{"name":"L-ascorbate:O2 oxidoreductase activity","type":"related"},{"name":"L-ascorbate:oxygen oxidoreductase activity","type":"related"},{"name":"L-ascorbic acid oxidase activity","type":"related"},{"name":"ascorbase activity","type":"related"},{"name":"ascorbate dehydrogenase activity","type":"related"},{"name":"ascorbate oxidase activity","type":"related"},{"name":"ascorbic acid oxidase activity","type":"related"},{"name":"ascorbic oxidase activity","type":"related"}],"termid":"GO:0008447"}


id: PBO:0041084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRMS1 like transcriptional repressor","termid":"PBO:0041084"}


id: PBO:0091302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrolase, N-terminal portion of Crd1 fusion protein","termid":"PBO:0091302"}


id: GO:0070040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine2503 in 23S rRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine2503 in 23S rRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:21527678","PMID:20184321","GOC:imk","RHEA:42916","PMID:20007606","PMID:21368151","PMID:21415317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0140098","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"rRNA (adenine(2503)-C2-)-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11586"],"synonyms":[{"name":"rRNA (adenine-C2-)-methyltransferase activity","type":"broad"}],"termid":"GO:0070040"}


id: PBO:0076744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia translocation altered","termid":"PBO:0076744"}


id: GO:0033749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the methyl group from a modified arginine residue at position 3 of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H4 demethylase activity","termid":"GO:0141058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0032452","GO:0016491","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H4R3 demethylase activity","synonyms":[{"name":"histone H4-methyl-arginine-3 demethylase activity","type":"exact"},{"name":"histone H4R3me demethylase activity","type":"exact"},{"name":"histone demethylase activity (H4-R3 specific)","type":"exact"}],"termid":"GO:0033749"}


id: PBO:0081444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 300 pseudogene 1","termid":"PBO:0081444"}


id: PBO:0072799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 5","termid":"PBO:0072799"}


id: GO:0009577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of an elaioplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"elaioplast","termid":"GO:0009545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"elaioplast stroma","termid":"GO:0009577"}


id: FYPO:0002590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any tRNA processing intermediates with 3' extensions measured in the mitochondria is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level","termid":"FYPO:0005999"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions","synonyms":[{"name":"increased accumulation of mitochondrial tRNA processing intermediates with 3' extensions","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during vegetative growth","type":"exact"}],"termid":"FYPO:0002590"}


id: PATO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's dependence on oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity to oxygen","termid":"PATO:0001454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aerobic","termid":"PATO:0001455"}


id: MONDO:0016608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality in which the occipitofrontal circumference is greater than two standard deviations above the mean for a given age. It is associated with hydrocephalus; subdural effusion; arachnoid cysts; or is part of a genetic condition (e.g., alexander disease; sotos syndrome).","definition_xrefs":["MESH:D058627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalencephaly","secondary_identifiers":["MedDRA:10050183","ICD9:742.4","UMLS:C0221355","icd11.foundation:368780653","SCTID:9740002","HP:0001355","Orphanet:2477","GARD:16601","MEDGEN:65141"],"synonyms":[{"name":"macroencephaly","type":"exact"},{"name":"megalencephaly","type":"exact"},{"name":"megalencephaly (disease)","type":"exact"}],"termid":"MONDO:0016608","xrefs":{"Monarch":{"xref_id":"0016608"}}}


id: PBO:0083805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that forms a dimer with Ntr1p; also forms a trimer, with Ntr2p and the DExD/H-box RNA helicase Prp43p, that is involved in spliceosome disassembly","termid":"PBO:0083805"}


id: GO:0150107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell-cell junction.","definition_xrefs":["GOC:aruk","PMID:26706435","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell-cell junction","termid":"GO:0150106"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell-cell junction","termid":"GO:0150107"}


id: PBO:0028665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_processing","termid":"PBO:0028665"}


id: GO:0038191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the neuropilin family.","definition_xrefs":["PMID:23871893","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neuropilin binding","synonyms":[{"name":"Nrp binding","type":"exact"},{"name":"Nrp ligand","type":"narrow"},{"name":"neuropilin-binding","type":"exact"}],"termid":"GO:0038191"}


id: FYPO:0007897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process during mitosis in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during mitotic exit.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitosis","termid":"FYPO:0004355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during mitotic exit","termid":"FYPO:0007897"}


id: GO:0071085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface protein CD9.","definition_xrefs":["PMID:10429193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD9 complex","synonyms":[{"name":"ITGA2b-ITGB3-CD9 complex","type":"narrow"}],"termid":"GO:0071085"}


id: RO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of 'expressed in'","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expresses","termid":"RO:0002292"}


id: GO:0061591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a population of galactosylceramide molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet as a result of a calcium stimulus.","definition_xrefs":["PMID:23532839","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium activated phospholipid scrambling","termid":"GO:0061588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"calcium activated galactosylceramide scrambling","termid":"GO:0061591"}


id: GO:0060024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the generation of rhythmic, synchronous synaptic inputs in a neural circuit.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"rhythmic synaptic transmission","termid":"GO:0060024"}


id: GO:0060996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine development","termid":"GO:0060996"}


id: GO:0003233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bulbus arteriosus is generated and organized. The bulbus arteriosus is an elastic cardiac chamber.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"bulbus arteriosus development","termid":"GO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bulbus arteriosus morphogenesis","termid":"GO:0003233"}


id: PBO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14 (predicted)","termid":"PBO:0002050"}


id: GO:2000519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 1 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell activation","termid":"GO:2000517"},{"relation_name":"positively_regulates","term_name":"T-helper 1 cell activation","termid":"GO:0035711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 1 cell activation","synonyms":[{"name":"positive regulation of Th1 cell activation","type":"exact"}],"termid":"GO:2000519"}


id: GO:0033691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sialic acid, a N- or O- substituted derivative of neuraminic acid, a nine carbon monosaccharide. Sialic acids often occur in polysaccharides, glycoproteins, and glycolipids in animals and bacteria.","definition_xrefs":["ISBN:9780721601465","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sialic acid binding","synonyms":[{"name":"N-acetylneuraminic acid binding","type":"narrow"}],"termid":"GO:0033691"}


id: GO:0060414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the smooth muscle tissue surrounding the aorta is generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:bf","Wikipedia:Aorta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue morphogenesis","termid":"GO:0060415"},{"relation_name":"part_of","term_name":"aorta morphogenesis","termid":"GO:0035909"},{"relation_name":"part_of","term_name":"smooth muscle tissue development","termid":"GO:0048745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aorta smooth muscle tissue morphogenesis","termid":"GO:0060414"}


id: GO:0047757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chondroitin D-glucuronate = dermatan L-iduronate.","definition_xrefs":["MetaCyc:CHONDROITIN-GLUCURONATE-5-EPIMERASE-RXN","EC:5.1.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"chondroitin-glucuronate 5-epimerase activity","secondary_identifiers":["RHEA:21084","Reactome:R-HSA-2022052"],"synonyms":[{"name":"chondroitin D-glucuronosyl 5-epimerase activity","type":"related"},{"name":"chondroitin-D-glucuronate 5-epimerase activity","type":"related"},{"name":"dermatan-sulfate 5-epimerase activity","type":"related"},{"name":"polyglucuronate 5-epimerase activity","type":"related"},{"name":"urunosyl C-5 epimerase activity","type":"related"}],"termid":"GO:0047757"}


id: PBO:0069240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 495, pseudogene","termid":"PBO:0069240"}


id: PBO:0083885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferrochelatase; a mitochondrial inner membrane protein, catalyzes insertion of ferrous iron into protoporphyrin IX, the eighth and final step in the heme biosynthetic pathway; human homolog FECH can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0083885"}


id: GO:0150022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an apical dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical dendrite development","termid":"GO:0150022"}


id: MONDO:0016954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 3q duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on thelong arm (q) of chromosome 3. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 3q duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Chromosome 3q duplication can be de novo or inherited from a parent with a chromosomal rearrangement such as a balanced translocation. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 3","termid":"MONDO:0016923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 3","secondary_identifiers":["MESH:C536813","GARD:5345","Orphanet:262851","MEDGEN:208636","icd11.foundation:1132834719","UMLS:C0795809"],"synonyms":[{"name":"Duplication 3q","type":"related"},{"name":"chromosome 3, trisomy 3q","type":"related"},{"name":"chromosome 3q duplication","type":"related"},{"name":"partial duplication of chromosome 3q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 3","type":"exact"},{"name":"partial trisomy of chromosome 3q","type":"exact"},{"name":"trisomy 3q","type":"related"}],"termid":"MONDO:0016954","xrefs":{"Monarch":{"xref_id":"0016954"}}}


id: PBO:0067457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 582, pseudogene","termid":"PBO:0067457"}


id: PBO:0072481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 10","termid":"PBO:0072481"}


id: PR:000050454
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein rnc1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-50 of the amino acid sequence represented by UniProtKB:O74919. Example: UniProtKB:O74919, Thr-50, PR:000026291.","definition_xrefs":["PMID:31911490","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","termid":"PR:000050452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnc1/UnPhos(T50)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: RNA-binding protein rnc1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rnc1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74919, Thr-50, PR:000026291","type":"narrow"},{"name":"rnc1/UnPhos(T50)","type":"exact"}],"termid":"PR:000050454"}


id: MONDO:0009629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Desbuquois dysplasia in which the cause of the disease is a mutation in the CANT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Desbuquois dysplasia","termid":"MONDO:0015426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Desbuquois dysplasia 1","secondary_identifiers":["MEDGEN:860583","GARD:16451","OMIM:251450","UMLS:C4012146"],"synonyms":[{"name":"CANT1 Desbuquois dysplasia","type":"exact"},{"name":"DBQD1","type":"related"},{"name":"Desbuquois dysplasia 1","type":"exact"},{"name":"Desbuquois dysplasia caused by mutation in CANT1","type":"exact"},{"name":"Desbuquois dysplasia type 1","type":"exact"},{"name":"Desbuquois dysplasia, Kim variant","type":"related"},{"name":"desbuquois syndrome","type":"related"},{"name":"micromelic dwarfism with vertebral and metaphyseal abnormalities and advanced carpotarsal ossification","type":"related"}],"termid":"MONDO:0009629","xrefs":{"Monarch":{"xref_id":"0009629"}}}


id: PBO:0108575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex armadillo-type fold Ipi1","termid":"PBO:0108575"}


id: GO:1990223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the cytokinin levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24124900"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of cytokinin levels in host (obsolete GO:1990223)","termid":"GO:1990223"}


id: PBO:0052999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 3","termid":"PBO:0052999"}


id: PBO:0060369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOSLID antisense RNA 1","termid":"PBO:0060369"}


id: PBO:0038935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 1C (class I), gamma polypeptide","termid":"PBO:0038935"}


id: GO:0033652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chlorophyll-containing plastid as found within host cells with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell plastid","termid":"GO:0033651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell chloroplast","termid":"GO:0033652"}


id: PBO:0036208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3_acetylation_during_vegetative_growth","termid":"PBO:0036208"}


id: PBO:0055394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2824","termid":"PBO:0055394"}


id: MONDO:0019961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete somatostatinoma (obsolete MONDO:0019961)","termid":"MONDO:0019961","xrefs":{"Monarch":{"xref_id":"0019961"}}}


id: GO:0061295
data:
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id: GO:0019609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","definition_xrefs":["PMID:6995433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-hydroxyphenylacetate metabolic process","synonyms":[{"name":"3-hydroxyphenylacetate metabolism","type":"exact"},{"name":"3HPA metabolic process","type":"exact"},{"name":"3HPA metabolism","type":"exact"}],"termid":"GO:0019609"}


id: MONDO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete stress polycythemia (obsolete MONDO:0002439)","termid":"MONDO:0002439","xrefs":{"Monarch":{"xref_id":"0002439"}}}


id: RO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_during","termid":"RO:0002093"}


id: PR:Q10216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YghA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01591","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C4H3.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.08","secondary_identifiers":["UniProtKB:Q10216"],"synonyms":[{"name":"Spom972h-yghA","type":"exact"}],"termid":"PR:Q10216"}


id: PBO:0071449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 55","termid":"PBO:0071449"}


id: GO:0070889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet alpha granule. A platelet alpha granule is a secretory organelle found in blood platelets.","definition_xrefs":["GOC:rph","PMID:16123220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet alpha granule organization","synonyms":[{"name":"platelet alpha granule organisation","type":"exact"},{"name":"platelet alpha granule organization and biogenesis","type":"related"},{"name":"platelet alpha-granule organization","type":"exact"}],"termid":"GO:0070889"}


id: GO:0005938
data:
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id: PBO:0081180
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id: PATO:0000728
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id: PBO:0035903
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id: SO:0002091
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id: PBO:0024483
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id: PBO:0064123
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id: FYPO:0006405
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id: PBO:0040859
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id: PBO:0045000
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id: GO:0071522
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id: MONDO:0018580
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id: PATO:0001979
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id: PBO:0051720
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id: PBO:0068944
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id: PBO:0090439
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id: GO:0006954
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id: PBO:0081135
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id: PBO:0028870
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id: GO:0000165
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id: PBO:0002334
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoglycolate hydrolase (predicted)","termid":"PBO:0002334"}


id: FYPO:0007599
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is increased at a site where silencing can be triggered by the ectopic tethering of a protein.","definition_xrefs":["PMID:23613586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin silencing at ectopic tethering site","synonyms":[{"name":"increased chromatin silencing at ectopic tethering site","type":"related"},{"name":"increased chromatin silencing at ectopic tethering site during vegetative growth","type":"exact"}],"termid":"FYPO:0007599"}


id: PBO:0088887
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein,TMEM14 superfamily member Aim19","termid":"PBO:0088887"}


id: FYECO:0000259
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id: PBO:0075867
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 7","termid":"PBO:0075867"}


id: SO:0000939
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Feature used for the recombination of genomic material for the purpose of generating diversity of the immune system.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_gene_recombination_signal_feature","synonyms":[{"name":"vertebrate immune system gene recombination signal feature","type":"exact"}],"termid":"SO:0000939"}


id: GO:0060781
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id: PBO:0084680
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial beta-keto-acyl synthase; possible role in fatty acid synthesis; required for mitochondrial respiration; human homolog OXSM can complement yeast cem1 null mutant","termid":"PBO:0084680"}


id: _global:interaction_genotype_b
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  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_genotype_b","termid":"_global:interaction_genotype_b"}


id: GO:0018453
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxytetrahydrofuran = 2 H+ + 2 e- + butyrolactone.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxytetrahydrofuran dehydrogenase activity (obsolete GO:0018453)","termid":"GO:0018453"}


id: GO:0044854
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id: SO:0001524
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a genome contains an abnormal amount of chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_genome","termid":"SO:0001506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomally_aberrant_genome","synonyms":[{"name":"chromosomally aberrant genome","type":"related"}],"termid":"SO:0001524"}


id: PBO:0085140
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein similar to large ribosomal subunit L7 proteins; constituent of 66S pre-ribosomal particles; plays an essential role in processing of precursors to the large ribosomal subunit RNAs; binds junction of ITS2 and ITS2-proximal stem between the 3' end of 5.8S rRNA and the 5' end of 25S rRNA","termid":"PBO:0085140"}


id: MONDO:0013252
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  {"annotated_genes":["SJAG_01644"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85545],"is_not":false,"summary":null,"term":"MONDO:0013252"}]},"cv_name":"mondo","definition":"A syndrome mainly characterized by severe growth retardation and microcephaly. It is a new form of cohesinopathy showing defects in sister chromatid cohesion and hypersensitivity to chemicals that induce replication stress, thus combining distinct cytogenetic features seen in Roberts syndrome and Fanconi anemia, respectively. It has material basis in homozygous or compound heterozygous mutation in the DDX11 gene on chromosome 12p11.","definition_xrefs":["PMID:26089203","PMID:21490908","DOID:0060535","PMID:20137776","PMID:23033317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01644":null},"genotype_count":0,"is_obsolete":false,"name":"Warsaw breakage syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613398","SCTID:702829000","GARD:13708","ICD9:759.89","icd11.foundation:833375162","MEDGEN:462008","UMLS:C3150658","NCIT:C164675","Orphanet:280558"],"synonyms":[{"name":"WABS","type":"exact"},{"name":"WARSAW breakage syndrome","type":"related"},{"name":"Warsaw breakage syndrome","type":"exact"}],"termid":"MONDO:0013252","terms_by_termid":{"MONDO:0013252":null},"xrefs":{"Monarch":{"xref_id":"0013252"}}}


id: PBO:0026994
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_meiotic_cell_cycle","termid":"PBO:0026994"}


id: PBO:0053390
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 317","termid":"PBO:0053390"}


id: PBO:0039583
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 2","termid":"PBO:0039583"}


id: GO:0019831
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id: GO:0016511
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id: GO:1990608
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id: MONDO:0002320
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id: GO:0015410
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  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107820],"is_not":false,"summary":null,"term":"GO:0015410"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mn2+(out) = ADP + phosphate + Mn2+(in).","definition_xrefs":["RHEA:17365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type manganese transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5692462","EC:7.2.2.5","MetaCyc:3.6.3.35-RXN"],"synonyms":[{"name":"ABC-type Mn(2+) transporter","type":"related"},{"name":"ATP-dependent manganese transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled manganese transmembrane transporter activity","type":"related"},{"name":"manganese ABC transporter","type":"narrow"},{"name":"manganese transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"manganese-transporting ATPase activity","type":"related"}],"termid":"GO:0015410","terms_by_termid":{"GO:0015410":null}}


id: PBO:0110168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zpr1 co-chaperone for EF-1 alpha folding","termid":"PBO:0110168"}


id: MONDO:0013848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the GATAD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 2B","secondary_identifiers":["OMIM:614672","UMLS:C3553409","GARD:15832","DOID:0110441","MEDGEN:766323"],"synonyms":[{"name":"CMD2B","type":"exact"},{"name":"GATAD1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 2B","type":"related"},{"name":"cardiomyopathy, dilated, type 2B","type":"exact"},{"name":"dilated cardiomyopathy 2B","type":"exact"},{"name":"dilated cardiomyopathy type 2B","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in GATAD1","type":"exact"}],"termid":"MONDO:0013848","xrefs":{"Monarch":{"xref_id":"0013848"}}}


id: PBO:0042403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 14B","termid":"PBO:0042403"}


id: PBO:0053328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 159","termid":"PBO:0053328"}


id: PATO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000754 startle response (obsolete PATO:0000754)","termid":"PATO:0000754"}


id: GO:0018586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butyltin + O2 + 2 H+ + 2 e- = H2O + beta-hydroxybutyltin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mono-butyltin dioxygenase activity (obsolete GO:0018586)","synonyms":[{"name":"MBT dioxygenase activity","type":"exact"}],"termid":"GO:0018586"}


id: PBO:0071860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 55","termid":"PBO:0071860"}


id: PBO:0058413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4782","termid":"PBO:0058413"}


id: GO:0106055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalysing the hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in an oligo-mannose oligosaccharide.","definition_xrefs":["PMID:21700223","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,2-alpha-mannosidase complex","termid":"GO:0106055"}


id: GO:0019249
data:
  {"annotated_genes":["SJAG_04674","SJAG_02988","SJAG_04404","SJAG_02106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58719,60053,60605,62105,87185,111944],"is_not":false,"summary":null,"term":"GO:0019249"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactate, the anion of lactic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lactate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"lactate anabolism","type":"exact"},{"name":"lactate biosynthesis","type":"exact"},{"name":"lactate formation","type":"exact"},{"name":"lactate synthesis","type":"exact"}],"termid":"GO:0019249","terms_by_termid":{"GO:0019249":null}}


id: GO:0045795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases cell volume.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell volume homeostasis","termid":"GO:0006884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell volume","termid":"GO:0045795"}


id: PBO:0030791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_vegetative_cell","termid":"PBO:0030791"}


id: GO:0072161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in renal system development","termid":"GO:2001012"},{"relation_name":"part_of","term_name":"kidney mesenchyme development","termid":"GO:0072074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"}


id: PBO:0055018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2433","termid":"PBO:0055018"}


id: PBO:0070763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 19","termid":"PBO:0070763"}


id: PBO:0078798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 16-5","termid":"PBO:0078798"}


id: GO:0051413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisone stimulus. Cortisone is a natural glucocorticoid steroid hormone that is metabolically convertible to cortisol. Cortisone is synthesized from cholesterol in the cortex of the adrenal gland under the stimulation of adrenocorticotropin hormone (ACTH). The main physiological effect of cortisone is on carbohydrate metabolism; it can stimulate increased glucose release from the liver, increased liver glycogen synthesis, and decreased utilization of glucose by the tissues.","definition_xrefs":["ISBN:0721662544","PMID:11276391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cortisone","synonyms":[{"name":"response to cortisone stimulus","type":"exact"}],"termid":"GO:0051413"}


id: PBO:0083928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Functional ortholog of human PIG-V; PIG-V is a mannosyltransferase that transfers the second mannose in glycosylphosphatidylinositol biosynthesis; the authentic, non-tagged protein was localized to mitochondria","termid":"PBO:0083928"}


id: MONDO:0007466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA, satellite, 3","secondary_identifiers":["OMIM:126370"],"synonyms":[{"name":"D1Z1","type":"related"},{"name":"DNA, satellite, III","type":"related"},{"name":"DNA, satellite, type 3","type":"exact"},{"name":"HS3","type":"related"}],"termid":"MONDO:0007466","xrefs":{"Monarch":{"xref_id":"0007466"}}}


id: GO:0035009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the rate or extent of the melanization defense response. This regulation is critical to limit melanization to the site of injury or infection.","definition_xrefs":["GOC:bf","PMID:12408809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of melanization defense response","termid":"GO:0035007"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"negatively_regulates","term_name":"melanization defense response","termid":"GO:0035006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of melanization defense response","synonyms":[{"name":"down regulation of melanization defense response","type":"exact"},{"name":"down-regulation of melanization defense response","type":"exact"},{"name":"downregulation of melanization defense response","type":"exact"},{"name":"inhibition of melanization defense response","type":"narrow"},{"name":"negative regulation of melanization defence response","type":"exact"}],"termid":"GO:0035009"}


id: PATO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001119 absolute momentum value (obsolete PATO:0001119)","termid":"PATO:0001119"}


id: MONDO:0009295
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84906],"is_not":false,"summary":null,"term":"MONDO:0009295"}]},"cv_name":"mondo","definition":"Muscle phosphofructokinase (PFK) deficiency (Tarui's disease), or glycogen storage disease type 7 (GSD7), is a rare form of glycogen storage disease characterized by exertional fatigue and muscular exercise intolerance. It occurs in childhood.","definition_xrefs":["Orphanet:371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005066","MONDO:0037792","MONDO:0019254"],"is_obsolete":false,"name":"glycogen storage disease VII","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1196","UMLS:C0017926","NANDO:1200823","MedDRA:10053241","OMIM:232800","SCTID:89597008","DOID:11721","MESH:D006014","NANDO:1200829","NCIT:C118437","MEDGEN:5342","GARD:5686","NANDO:2200543"],"synonyms":[{"name":"GSD 7","type":"related"},{"name":"GSD due to muscle phosphofructokinase deficiency","type":"exact"},{"name":"GSD type 7","type":"exact"},{"name":"GSD type VII","type":"exact"},{"name":"GSD7","type":"related"},{"name":"GSDVII","type":"exact"},{"name":"Glycogen Storage Disease Type 7","type":"exact"},{"name":"PFKM glycogen storage disease","type":"exact"},{"name":"Pfkm deficiency","type":"related"},{"name":"Tarui disease","type":"exact"},{"name":"glycogen storage disease 7","type":"related"},{"name":"glycogen storage disease VII","type":"exact"},{"name":"glycogen storage disease caused by mutation in PFKM","type":"exact"},{"name":"glycogen storage disease due to muscle phosphofructokinase deficiency","type":"related"},{"name":"glycogen storage disease type 7","type":"exact"},{"name":"glycogen storage disease type VII","type":"exact"},{"name":"glycogen storage disease, type VII","type":"exact"},{"name":"glycogenosis due to muscle phosphofructokinase deficiency","type":"exact"},{"name":"glycogenosis type 7","type":"exact"},{"name":"glycogenosis type VII","type":"exact"},{"name":"muscle phosphofructokinase deficiency","type":"related"},{"name":"phosphofructokinase deficiency","type":"exact"},{"name":"phosphofructokinase myopathy","type":"exact"}],"termid":"MONDO:0009295","terms_by_termid":{"MONDO:0009295":null},"xrefs":{"Monarch":{"xref_id":"0009295"}}}


id: PBO:0041999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 50","termid":"PBO:0041999"}


id: PBO:0083703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER exit adaptor for Golgi mannosyltransferases; facilitates the exit of Kre2p, Ktr1p and Mnn4p from the ER; involved in COPII-coated vesicle cargo loading and transport; may also promote the retention of proteins in the early Golgi compartment; integral membrane protein of early Golgi and ER","termid":"PBO:0083703"}


id: GO:0140925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-phenylalanine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:11069779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"},{"relation_name":"is_a","term_name":"phenylalanine transport","termid":"GO:0015823"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-phenylalanine import across plasma membrane","termid":"GO:0140925"}


id: PBO:0036131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_CCR4-NOT_complex_binding","termid":"PBO:0036131"}


id: PBO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase (predicted)","termid":"PBO:0001790"}


id: GO:0032308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of icosanoid secretion","termid":"GO:0032305"},{"relation_name":"is_a","term_name":"regulation of prostaglandin secretion","termid":"GO:0032306"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"prostaglandin secretion","termid":"GO:0032310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin secretion","synonyms":[{"name":"activation of prostaglandin secretion","type":"narrow"},{"name":"positive regulation of prostacyclin secretion","type":"narrow"},{"name":"stimulation of prostaglandin secretion","type":"narrow"},{"name":"up regulation of prostaglandin secretion","type":"exact"},{"name":"up-regulation of prostaglandin secretion","type":"exact"},{"name":"upregulation of prostaglandin secretion","type":"exact"}],"termid":"GO:0032308"}


id: GO:0003121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vasodilation process resulting from secretion of epinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine-mediated vasodilation","secondary_identifiers":["GO:0003124","GO:0003123"],"synonyms":[{"name":"regulation of vasodilation by adrenaline","type":"related"},{"name":"regulation of vasodilation by circulating adrenaline","type":"related"},{"name":"regulation of vasodilation by circulating epinephrine","type":"related"},{"name":"regulation of vasodilation by epinephrine","type":"related"},{"name":"regulation of vasodilation by neuronal adrenaline","type":"related"},{"name":"regulation of vasodilation by neuronal epinephrine","type":"related"}],"termid":"GO:0003121"}


id: FYPO:0006085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which intramolecular conversion of uridine to pseudouridine in an snRNA molecule is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0031120","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal snRNA pseudouridylation","synonyms":[{"name":"normal snRNA pseudouridine synthesis","type":"exact"},{"name":"normal snRNA pseudouridylation during mitotic cell cycle","type":"related"},{"name":"normal snRNA pseudouridylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006085"}


id: GO:0140892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction chloride(in) + 2 hydrogencarbonate(out) + Na+(out) = chloride(out) + 2 hydrogencarbonate(in) + Na+(in).","definition_xrefs":["PMID:18577713","PMID:20389022","PMID:8189393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"},{"relation_name":"is_a","term_name":"chloride:bicarbonate antiporter activity","termid":"GO:0140900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium,bicarbonate:chloride antiporter activity","secondary_identifiers":["TC:2.A.31.2.4"],"synonyms":[{"name":"sodium,hydrogencarbonate:chloride antiporter activity","type":"exact"},{"name":"sodium-dependent chloride/bicarbonate exchanger activity","type":"exact"}],"termid":"GO:0140892"}


id: MONDO:0019993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A narrowing of renal arteries that is present since birth.","definition_xrefs":["PMID:25316474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital renal artery stenosis","secondary_identifiers":["ICD10CM:Q27.1","MEDGEN:635552","icd11.foundation:856359002","SCTID:271432005","GARD:19381","UMLS:C0495523","Orphanet:97598"],"synonyms":[{"name":"congenital RAS","type":"exact"},{"name":"congenital renovascular hypoplasia","type":"exact"}],"termid":"MONDO:0019993","xrefs":{"Monarch":{"xref_id":"0019993"}}}


id: GO:0050748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein metabolic process","synonyms":[{"name":"down regulation of lipoprotein metabolic process","type":"exact"},{"name":"down-regulation of lipoprotein metabolic process","type":"exact"},{"name":"downregulation of lipoprotein metabolic process","type":"exact"},{"name":"inhibition of lipoprotein metabolic process","type":"narrow"},{"name":"negative regulation of lipoprotein metabolism","type":"exact"}],"termid":"GO:0050748"}


id: CHEBI:71240
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium diphosphate","termid":"CHEBI:71240"}


id: PBO:0052065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT6A antisense RNA 1","termid":"PBO:0052065"}


id: FYPO:0000627
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 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phenotype in which a specific cellular process is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01143":null,"SJAG_01355":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":7,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta 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process","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04883","SJAG_03689","SJAG_01355","SJAG_01143","SJAG_00601"],"single_locus_genotype_uniquenames":["rip1delta","ptp4delta","cox6delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","dcr1delta"],"termid":"FYPO:0000627","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000579":null,"FYPO:0000590":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: PBO:0031441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein_during_vegetative_growth","termid":"PBO:0031441"}


id: PBO:0029107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_amino_acid_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0029107"}


id: MONDO:0009919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peroxisomal acyl-CoA oxidase deficiency is a rare neurodegenerative disorder that belongs to the group of inherited peroxisomal disorders and is characterized by hypotonia and seizures in the neonatal period and neurological regression in early infancy.","definition_xrefs":["Orphanet:2971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"peroxisomal acyl-CoA oxidase deficiency","secondary_identifiers":["MESH:C536662","SCTID:238069004","ICD9:255.41","MEDGEN:376636","OMIM:264470","UMLS:C1849678","NCIT:C170437","icd11.foundation:927825451","NANDO:1200765","DOID:0050797","GARD:4543"],"synonyms":[{"name":"ACOX1 deficiency","type":"exact"},{"name":"Pseudoadrenoleukodystrophy","type":"exact"},{"name":"Pseudoneonatal adrenoleukodystrophy","type":"related"},{"name":"peroxisomal acyl-CoA oxidase deficiency","type":"exact"},{"name":"peroxisomal acyl-coenzyme A oxidase","type":"exact"},{"name":"pseudo-NALD","type":"exact"},{"name":"pseudo-neonatal adrenoleukodystrophy","type":"exact"},{"name":"straight-chain acyl-Coa oxidase deficiency","type":"related"}],"termid":"MONDO:0009919","xrefs":{"Monarch":{"xref_id":"0009919"}}}


id: GO:0035179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fine-tuning the spatial position of a larva in response to variability in their environment. For example, reorientation of a larva in the direction of a food source.","definition_xrefs":["PMID:10880478"],"gene_count":0,"genotype_count":0,"name":"obsolete larval turning behavior (obsolete GO:0035179)","synonyms":[{"name":"larval turning behaviour","type":"exact"}],"termid":"GO:0035179"}


id: GO:0060865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand and contributing to the decrease in the rate or frequency of floral organ abscission.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of floral organ abscission by transmembrane receptor protein serine/threonine kinase signaling pathway (obsolete GO:0060865)","synonyms":[{"name":"negative regulation of floral organ abscission by transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0060865"}


id: MONDO:0014759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the HNMT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 51","secondary_identifiers":["OMIM:616739","UMLS:C4225220","MEDGEN:903243","GARD:22571","DOID:0081214"],"synonyms":[{"name":"HNMT autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT51","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in HNMT","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 51","type":"exact"},{"name":"intellectual disability, autosomal recessive 51","type":"exact"},{"name":"intellectual disability, autosomal recessive type 51","type":"exact"},{"name":"mental retardation, autosomal recessive 51","type":"exact"},{"name":"mental retardation, autosomal recessive type 51","type":"exact"}],"termid":"MONDO:0014759","xrefs":{"Monarch":{"xref_id":"0014759"}}}


id: PR:G2TRV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf8 gene.","definition_xrefs":["UniProtKB:G2TRV0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.10","synonyms":[{"name":"Spom972h-wtf8","type":"exact"}],"termid":"PR:G2TRV0"}


id: PBO:0079419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 2","termid":"PBO:0079419"}


id: MOD:00312
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-myristoyl-L-cysteine.","definition_xrefs":["PubMed:8824274","Unimod:45#C","PubMed:10026218","RESID:AA0307","PubMed:10080938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-myristoylated residue","termid":"MOD:00655"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-myristoyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(tetradecanoylsulfanyl)propanoic acid","type":"exact"},{"name":"LIPID S-myristoyl cysteine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"S-(C14:1 aliphatic acyl)cysteine","type":"exact"},{"name":"S-myristoyl-L-cysteine","type":"exact"},{"name":"S-myristoylated L-cysteine","type":"exact"},{"name":"SMyrCys","type":"exact"},{"name":"tetradecanoate cysteine thioester","type":"exact"}],"termid":"MOD:00312"}


id: GO:0015697
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"}]},"cv_name":"biological_process","definition":"The directed movement into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"quaternary ammonium group transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015845"],"synonyms":[{"name":"quaternary amine transport","type":"exact"},{"name":"quaternary ammonium compound transport","type":"exact"}],"termid":"GO:0015697","terms_by_termid":{"GO:1990545":null}}


id: PR:Q01663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1-like transcription factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:15165244","PomBase:MAH","PMID:1899230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-1-like transcription factor","termid":"PR:000027897"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1-like transcription factor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.07c","secondary_identifiers":["UniProtKB:Q01663","PR:000027898"],"synonyms":[{"name":"SPAC1783.07C","type":"related"},{"name":"Spom972h-pap1","type":"exact"}],"termid":"PR:Q01663"}


id: PBO:0081047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 3","termid":"PBO:0081047"}


id: MONDO:0011534
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86287,86288],"is_not":false,"summary":null,"term":"MONDO:0011534"}]},"cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 4G (CMT4G) is a subtype of Charcot-Marie-Tooth disease type 4 characterized by early childhood onset of progressive distal muscle weakness and atrophy, delayed motor development, prominent distal sensory impairment, areflexia, moderately reduced nerve conduction velocities, and foot and hand deformities in Balkan (Russe) Gypsies.","definition_xrefs":["Orphanet:99953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 4","termid":"MONDO:0018995"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0019254","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4G","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110196","OMIM:605285","MESH:C535813","GARD:10132","UMLS:C1854449","SCTID:715799004","MEDGEN:343122","icd11.foundation:995395080"],"synonyms":[{"name":"CMT4G","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4 caused by mutation in HK1","type":"exact"},{"name":"Charcot-Marie-Tooth disease, autosomal recessive, type 4G","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4G","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 4G","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 4G","type":"related"},{"name":"HK1 Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"HMSNR","type":"exact"},{"name":"autosomal recessive Charcot-Marie-Tooth disease type 4G","type":"exact"},{"name":"hereditary motor and sensory neuropathy Russe type","type":"exact"},{"name":"hereditary motor and sensory neuropathy, Russe type","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, Russe type","type":"related"}],"termid":"MONDO:0011534","terms_by_termid":{"MONDO:0011534":null},"xrefs":{"Monarch":{"xref_id":"0011534"}}}


id: GO:0140021
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110037],"is_not":false,"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The process in which ADP is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:2541251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transport","termid":"GO:0015866"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"mitochondrial ADP transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140021","terms_by_termid":{"GO:0140021":null}}


id: PBO:0080667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 12","termid":"PBO:0080667"}


id: PBO:0061396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide A","termid":"PBO:0061396"}


id: FYPO:0007353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region on chromosome 2.","definition_xrefs":["PMID:31811152","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"normal homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"}],"termid":"FYPO:0007353"}


id: PBO:0092024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamine (uug), mitochondrial","termid":"PBO:0092024"}


id: GO:0061808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination at the centromere.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at centromere","termid":"GO:0061806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA recombination at centromere","synonyms":[{"name":"negative regulation of centromeric recombination","type":"exact"}],"termid":"GO:0061808"}


id: PBO:0044677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible 1 homolog 1","termid":"PBO:0044677"}


id: PBO:0047310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase","termid":"PBO:0047310"}


id: GO:1902133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-secoisolariciresinol.","definition_xrefs":["GOC:TermGenie","PMID:15949826","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-secoisolariciresinol metabolic process","synonyms":[{"name":"(+)-secoisolariciresinol metabolism","type":"exact"}],"termid":"GO:1902133"}


id: PBO:0041473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 52","termid":"PBO:0041473"}


id: MONDO:0020382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal pattern dystrophy simulating fundus flavimaculatus is a patterned dystrophy of the retinal pigment epithelium characterized by multiple yellowish irregular flecks scattered or interconnected around the macula, simulating what is observed in Stargardt disease, and usually asymptomatic until adulthood when patients present with a slowly progressive loss of vision that often only becomes apparent in old age.","definition_xrefs":["Orphanet:99003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned dystrophy of the retinal pigment epithelium","termid":"MONDO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"multifocal pattern dystrophy simulating fundus flavimaculatus","secondary_identifiers":["SCTID:723408004","MEDGEN:1376850","icd11.foundation:1819044742","UMLS:C4509881","GARD:19612","ICD10CM:H35.5"],"synonyms":[{"name":"multifocal pattern dystrophy simulating Stargardt disease","type":"exact"}],"termid":"MONDO:0020382","xrefs":{"Monarch":{"xref_id":"0020382"}}}


id: GO:1902521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an etoposide stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23648065","GOC:dw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to glucoside","termid":"GO:1904631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to etoposide","termid":"GO:1902521"}


id: PBO:0029557
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized,_curved_actomyosin_contractile_ring","termid":"PBO:0029557"}


id: GO:0060299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of sarcomere organization","termid":"GO:0060297"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"negative regulation of sarcomere organization","synonyms":[{"name":"negative regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060299"}


id: GO:0002359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a B-1 B cell by cell division. Follows B cell activation.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell proliferation","termid":"GO:0042100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1 B cell proliferation","synonyms":[{"name":"B-1 B lymphocyte proliferation","type":"exact"},{"name":"B-1 B-cell proliferation","type":"exact"},{"name":"B-1 B-lymphocyte proliferation","type":"exact"}],"termid":"GO:0002359"}


id: PBO:0049151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 8 (putative)","termid":"PBO:0049151"}


id: PBO:0039036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 13, pseudogene","termid":"PBO:0039036"}


id: GO:0031170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ferricrocin, a cyclic hexapeptide siderophore with the structure Gly-Ser-Gly-(N5-acetyl-N5-hydroxyornithine)3.","definition_xrefs":["GOC:mah","PMID:12828635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrichrome metabolic process","termid":"GO:0031168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ferricrocin metabolic process","synonyms":[{"name":"ferricrocin metabolism","type":"exact"}],"termid":"GO:0031170"}


id: PR:Q10268
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mac1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-anchored protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.04c","synonyms":[{"name":"Spom972h-mac1","type":"exact"}],"termid":"PR:Q10268"}


id: PBO:0039153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4","termid":"PBO:0039153"}


id: PBO:0072660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 2","termid":"PBO:0072660"}


id: PBO:0047991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member H, pseudogene","termid":"PBO:0047991"}


id: GO:0045566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045566)","synonyms":[{"name":"activation of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor 1 biosynthetic process","type":"exact"}],"termid":"GO:0045566"}


id: _global:transcribed_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is transcribed_from Y if X is synthesized from template Y.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_from","termid":"_global:transcribed_from"}


id: GO:0043296
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in some invertebrates, such as Drosophila, is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability.","definition_xrefs":["PMID:15196556","PMID:12525486","GOC:go_curators","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical junction complex","synonyms":[{"name":"apical cell junction complex","type":"exact"},{"name":"apical junction","type":"exact"}],"termid":"GO:0043296"}


id: SO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short (typically a few hundred base pairs) DNA sequence that has a single occurrence in a genome and whose location and base sequence are known.","direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STS","synonyms":[{"name":"INSDC_feature:STS","type":"exact"},{"name":"sequence tag site","type":"exact"}],"termid":"SO:0000331"}


id: GO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disaccharide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"},{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}


id: GO:0048915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line system over time, from its formation to the mature structure. The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance.","definition_xrefs":["ISBN:0125296509","PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"},{"relation_name":"part_of","term_name":"mechanosensory lateral line system development","termid":"GO:0048881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line system development","synonyms":[{"name":"PLL","type":"related"}],"termid":"GO:0048915"}


id: FYPO:0008205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during hypoxic stress.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to nucleus during hypoxia","termid":"FYPO:0008205"}


id: PBO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.1","termid":"PBO:0000106"}


id: PBO:0108558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor, Clr6 and Rpd3L histone deacetylase complex subunit Pst3","termid":"PBO:0108558"}


id: PBO:0045382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 4","termid":"PBO:0045382"}


id: PBO:0040260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 13","termid":"PBO:0040260"}


id: FYPO:0005462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule-based movement occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased microtubule-based movement during vegetative growth","synonyms":[{"name":"decreased microtubule-based movement during mitotic cell cycle","type":"related"},{"name":"reduced microtubule-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005462"}


id: PBO:0028003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_cell_with_abnormal_nuclear_morphology","termid":"PBO:0028003"}


id: PBO:0045415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 5","termid":"PBO:0045415"}


id: PBO:0056432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 5","termid":"PBO:0056432"}


id: GO:0036036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a cardiac neural crest cell physically separates from the rest of the neural tube.","definition_xrefs":["GOC:hjd","PMID:18539270","PMID:17076275","PMID:20490374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell delamination","termid":"GO:0036032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cardiac neural crest cell delamination","termid":"GO:0036036"}


id: PBO:0090354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase alpha subunit Bet4","termid":"PBO:0090354"}


id: PBO:0062484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily A member 3 pseudogene","termid":"PBO:0062484"}


id: GO:0031087
data:
  {"annotated_genes":["SJAG_04640","SJAG_02370","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91750,104738],"is_not":false,"summary":null,"term":"GO:0031087"},{"annotations":[90870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear-transcribed mRNA that is independent of poly(A) tail shortening.","definition_xrefs":["PMID:15225542","PMID:15225544","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methylguanosine-cap decapping","termid":"GO:0110156"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","termid":"GO:0031086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"deadenylation-independent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"deadenylylation-independent decapping","type":"exact"}],"termid":"GO:0031087","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: MONDO:1012917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in pigs due to a mutation in the PSEN1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, PSEN1-related, pig","secondary_identifiers":["OMIA:002493-9823"],"termid":"MONDO:1012917","xrefs":{"Monarch":{"xref_id":"1012917"}}}


id: PBO:0091631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lactate dehydrogenase","termid":"PBO:0091631"}


id: GO:0001678
data:
  {"annotated_genes":["SJAG_01754","SJAG_04495","SJAG_01254","SJAG_00574","SJAG_04334","SJAG_02444","SJAG_04026","SJAG_00472","SJAG_04312","SJAG_01699","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93726,97191],"is_not":false,"summary":null,"term":"GO:0001678"},{"annotations":[93427,114664,115696,101032,105065,105654,108163,106003,108669],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of glucose within a cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose homeostasis","termid":"GO:0042593"},{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular glucose homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell glucose homeostasis","type":"exact"},{"name":"cellular glucose homeostasis","type":"exact"}],"termid":"GO:0001678","terms_by_termid":{"GO:0001678":null,"GO:0010619":null}}


id: MONDO:0000262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fungus infection of the external ear, usually by aspergillus species","definition_xrefs":["MESH:D059249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otitis externa","termid":"MONDO:0004795"},{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"otomycosis","secondary_identifiers":["icd11.foundation:107388709","SCTID:53316003","DOID:0050147","ICD9:111.8","MEDGEN:452110","UMLS:C0029895"],"synonyms":[{"name":"Singapore ear","type":"related"},{"name":"external ear fungal infectious disease","type":"exact"},{"name":"otitis mycotic externa","type":"related"}],"termid":"MONDO:0000262","xrefs":{"Monarch":{"xref_id":"0000262"}}}


id: MONDO:0018904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare glomerular disease characterized by a pattern of glomerular injury on kidney biopsy with characteristic light microscopic changes: mesangial hypercellularity, endocapillary proliferation, and thickening of the glomerular basement membrane (GBM). On the basis of immunofluorescence (IF) the disorder is divided into C3 glomerulopathy (C3G) or immunoglobulin-mediated membranoproliferative glomerulonephritis. Through electron microscopy C3G is further divided into Dense deposit disease, with highly electrondense deposits in the glomerular basement membrane, and C3 glomerulonephritis, with mesangial, intramembranous, subendothelial and subepithelial deposits. Secondary causes (autoimmune, infectious, malignancies) are excluded.","definition_xrefs":["Orphanet:54370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"primary membranoproliferative glomerulonephritis","secondary_identifiers":["NANDO:1200725","SCTID:80321008","GARD:11982","MedDRA:10018370","NANDO:2200123","ICD9:583.2"],"synonyms":[{"name":"MPGN","type":"exact"},{"name":"Mesangiocapillary glomerulonephritis","type":"exact"},{"name":"membranoproliferative glomerulonephritis","type":"related"}],"termid":"MONDO:0018904","xrefs":{"Monarch":{"xref_id":"0018904"}}}


id: PBO:0041320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 72","termid":"PBO:0041320"}


id: FYPO:0003131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"normal protein phosphorylation during cellular response to IR","type":"exact"},{"name":"normal protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0003131"}


id: PBO:0072636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1 pseudogene 2","termid":"PBO:0072636"}


id: PBO:0013791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase/ flavoprotein fusion protein Hal3","termid":"PBO:0013791"}


id: GO:0033127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of one or more phosphate groups to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone phosphorylation (obsolete GO:0033127)","termid":"GO:0033127"}


id: GO:0047158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1-O-sinapoyl-beta-D-glucose = 1,2-di-O-sinapoyl-beta-D-glucose + D-glucose.","definition_xrefs":["EC:2.3.1.103","RHEA:22664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-sinapoyltransferase activity","termid":"GO:0016753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00063","MetaCyc:2.3.1.103-RXN"],"synonyms":[{"name":"1-(hydroxycinnamoyl)-glucose:1-(hydroxycinnamoyl)-glucose hydroxycinnamoyltransferase activity","type":"related"},{"name":"1-O-(4-hydroxy-3,5-dimethoxycinnamoyl)-beta-D-glucoside:1-O-(4-hydroxy-3,5-dimethoxycinnamoyl-beta-D-glucoside 1-O-sinapoyltransferase activity","type":"related"},{"name":"hydroxycinnamoylglucose-hydroxycinnamoylglucose hydroxycinnamoyltransferase activity","type":"related"}],"termid":"GO:0047158"}


id: FYPO:0007924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of potassium chloride and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of potassium chloride and sodium dodecyl sulfate that allow wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to potassium chloride and sodium dodecyl sulfate","termid":"FYPO:0007924"}


id: PBO:0067845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 147","termid":"PBO:0067845"}


id: MONDO:0013589
data:
  {"annotated_genes":["SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85164],"is_not":false,"summary":null,"term":"MONDO:0013589"}]},"cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the MYO1E gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15761","MEDGEN:481535","UMLS:C3279905","DOID:0111131","OMIM:614131"],"synonyms":[{"name":"FSGS6","type":"exact"},{"name":"MYO1E focal segmental glomerulosclerosis","type":"exact"},{"name":"focal segmental glomerulosclerosis 6","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in MYO1E","type":"exact"},{"name":"focal segmental glomerulosclerosis type 6","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 6","type":"related"}],"termid":"MONDO:0013589","terms_by_termid":{"MONDO:0013589":null},"xrefs":{"Monarch":{"xref_id":"0013589"}}}


id: PBO:0076491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF21 antisense RNA inducing promoter demethylation","termid":"PBO:0076491"}


id: MONDO:0957268
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85793,85794],"is_not":false,"summary":null,"term":"MONDO:0957268"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"is_obsolete":false,"name":"hypersulfaturia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830511","OMIM:620372","MEDGEN:1841147"],"termid":"MONDO:0957268","terms_by_termid":{"MONDO:0957268":null},"xrefs":{"Monarch":{"xref_id":"0957268"}}}


id: PBO:0063675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 4","termid":"PBO:0063675"}


id: MONDO:0033550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete high density lipoprotein cholesterol level quantitative trait locus 7 (obsolete MONDO:0033550)","secondary_identifiers":["OMIM:618979"],"synonyms":[{"name":"HDLCQ7","type":"related"},{"name":"HIGH DENSITY LIPOPROTEIN CHOLESTEROL LEVEL QUANTITATIVE TRAIT LOCUS 7","type":"related"}],"termid":"MONDO:0033550","xrefs":{"Monarch":{"xref_id":"0033550"}}}


id: GO:0006075
data:
  {"annotated_genes":["SJAG_01290","SJAG_04666","SJAG_03705","SJAG_00876","SJAG_04462","SJAG_05285","SJAG_00218","SJAG_01835","SJAG_01787","SJAG_03587","SJAG_01288","SJAG_04771","SJAG_04668","SJAG_01255","SJAG_02222","SJAG_00610","SJAG_04659","SJAG_04483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105262,112296,90789,90800,106933,114953,108453,87281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[91618],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[86733,91622],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[117035,117159,89978,91624,91606,105076,102026,104506],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"},{"relation_name":"is_a","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,3-beta-D-glucan biosynthetic process","type":"exact"},{"name":"1,3-beta-glucan anabolism","type":"exact"},{"name":"1,3-beta-glucan biosynthesis","type":"exact"},{"name":"1,3-beta-glucan formation","type":"exact"},{"name":"1,3-beta-glucan synthesis","type":"exact"},{"name":"beta-1,3 glucan anabolism","type":"exact"},{"name":"beta-1,3 glucan biosynthesis","type":"exact"},{"name":"beta-1,3 glucan biosynthetic process","type":"exact"},{"name":"beta-1,3 glucan formation","type":"exact"},{"name":"beta-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0006075","terms_by_termid":{"GO:0034413":null,"GO:0060635":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: MONDO:0004291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the larynx that arises from the subglottic area. Symptoms include dyspnea and stridor. It spreads to the hypopharynx, trachea, and thyroid gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subglottis carcinoma","termid":"MONDO:0004358"},{"relation_name":"is_a","term_name":"laryngeal squamous cell carcinoma","termid":"MONDO:0005595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"subglottis squamous cell carcinoma","secondary_identifiers":["NCIT:C8187","DOID:7585","UMLS:C0280326","MEDGEN:124720"],"synonyms":[{"name":"epidermoid carcinoma of subglottis","type":"exact"},{"name":"epidermoid carcinoma of the subglottis","type":"exact"},{"name":"squamous cell carcinoma of subglottis","type":"exact"},{"name":"squamous cell carcinoma of the subglottis","type":"exact"},{"name":"subglottic epidermoid carcinoma","type":"exact"},{"name":"subglottic squamous cell carcinoma","type":"exact"},{"name":"subglottis epidermoid carcinoma","type":"exact"},{"name":"subglottis squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004291","xrefs":{"Monarch":{"xref_id":"0004291"}}}


id: PBO:0091472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose alpha-glucosidase Suc2","termid":"PBO:0091472"}


id: PBO:0039768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 3 (Gill blood group)","termid":"PBO:0039768"}


id: PBO:0055148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2567","termid":"PBO:0055148"}


id: FYECO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any series of two or more different sets of conditions used in a single experiment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping sequential growth conditions","termid":"FYECO:0000094"}


id: MONDO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin sarcoma (obsolete MONDO:0002391)","termid":"MONDO:0002391","xrefs":{"Monarch":{"xref_id":"0002391"}}}


id: PBO:0081016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB47 and NKTR antisense RNA 1","termid":"PBO:0081016"}


id: GO:0044101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-citramalyl-CoA = pyruvate + acetyl-CoA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-citramalyl-CoA lyase activity","secondary_identifiers":["MetaCyc:RXN-13231","EC:4.1.3.46","RHEA:38275"],"synonyms":[{"name":"Ccl","type":"related"},{"name":"R-citramalyl-CoA lyase activity","type":"exact"}],"termid":"GO:0044101"}


id: PBO:0049835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high density lipoprotein binding protein","termid":"PBO:0049835"}


id: PBO:0054475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1875","termid":"PBO:0054475"}


id: GO:0004385
data:
  {"annotated_genes":["SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101423],"is_not":false,"summary":null,"term":"GO:0004385"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GMP = ADP + GDP.","definition_xrefs":["EC:2.7.4.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate kinase activity","termid":"GO:0050145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"guanylate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9748963","Reactome:R-HSA-110133","Reactome:R-HSA-73788","MetaCyc:GUANYL-KIN-RXN","RHEA:20780","Reactome:R-HSA-9748949"],"synonyms":[{"name":"5'-GMP kinase activity","type":"related"},{"name":"ATP:(d)GMP phosphotransferase activity","type":"related"},{"name":"ATP:GMP phosphotransferase activity","type":"related"},{"name":"GMP kinase activity","type":"related"},{"name":"deoxyguanylate kinase activity","type":"related"},{"name":"guanosine monophosphate kinase activity","type":"related"},{"name":"membrane-associated guanylate kinase","type":"narrow"}],"termid":"GO:0004385","terms_by_termid":{"GO:0004385":null}}


id: MONDO:1010453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conotruncal heart malformations that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations, non-human animal","termid":"MONDO:1010012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conotruncal heart malformations, dog","secondary_identifiers":["OMIA:000224-9615"],"termid":"MONDO:1010453","xrefs":{"Monarch":{"xref_id":"1010453"}}}


id: GO:0075189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont hyphopodium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of hyphopodium formation","termid":"GO:0075188"},{"relation_name":"positively_regulates","term_name":"hyphopodium formation","termid":"GO:0075187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hyphopodium formation","synonyms":[{"name":"positive regulation of hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075189"}


id: PBO:0050169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 25","termid":"PBO:0050169"}


id: GO:0042714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins on DNA or RNA to form the complex that mediates dosage compensation on one or more X chromosomes.","definition_xrefs":["PMID:12672493","PMID:11102361","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006325","GO:0065003"],"is_obsolete":false,"name":"dosage compensation complex assembly","termid":"GO:0042714"}


id: PBO:0041151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 6","termid":"PBO:0041151"}


id: PBO:0042213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L1","termid":"PBO:0042213"}


id: FYPO:0001899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer cytoplasmic mRNA processing bodies (P-bodies) than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-bodies present in decreased numbers","termid":"FYPO:0001898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"P-bodies present in decreased numbers during glucose starvation","synonyms":[{"name":"P bodies present in decreased numbers during glucose starvation","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose depletion","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose deprivation","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose limitation","type":"related"},{"name":"P-bodies present in reduced numbers during glucose starvation","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in decreased numbers during glucose starvation","type":"exact"},{"name":"decreased P-body formation during glucose starvation","type":"related"},{"name":"decreased P-body number during glucose starvation","type":"exact"},{"name":"decreased number of P-bodies present during glucose starvation","type":"exact"},{"name":"fewer P-bodies present during glucose starvation","type":"exact"}],"termid":"FYPO:0001899"}


id: PBO:0041681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dependent secretion activator 2","termid":"PBO:0041681"}


id: GO:0034440
data:
  {"annotated_genes":["SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"}]},"cv_name":"biological_process","definition":"The removal of one or more electrons from a lipid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid oxidation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034440","terms_by_termid":{"GO:0001561":null}}


id: GO:1903741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["GO_REF:0000059","GOC:rn","GOC:TermGenie","PMID:22334681"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidate phosphatase activity (obsolete GO:1903741)","synonyms":[{"name":"down regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"down regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"down regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"down regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"down regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"down-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"down-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"downregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"downregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"downregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"downregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"downregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"downregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"downregulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"inhibition of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatic acid phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"inhibition of phosphatidate phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"negative regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"negative regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"negative regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"negative regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903741"}


id: GO:0019030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form an icosahedron, a solid with 20 faces and 12 vertices. Icosahedral capsids have 12 pentamers plus 10(T-1) hexamers, where T is the triangulation number. Tobacco satellite necrosis virus has such a capsid structure.","definition_xrefs":["ISBN:071673706X","VZ:885","ISBN:0198506732","Wikipedia:Capsid","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid","synonyms":[{"name":"quasispherical viral capsid","type":"exact"}],"termid":"GO:0019030"}


id: GO:0052315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytoalexins, any of a range of substances produced by plants as part of their defense response.","definition_xrefs":["PMID:22209038","PMID:3882051","Wikipedia:Phytoalexin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"phytoalexin biosynthetic process","synonyms":[{"name":"phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052315"}


id: MONDO:0025517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a shrimp food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete shrimp allergy (obsolete MONDO:0025517)","secondary_identifiers":["DOID:0040001"],"synonyms":[{"name":"allergy of shrimp food product","type":"exact"},{"name":"shrimp food product allergic disease","type":"exact"}],"termid":"MONDO:0025517","xrefs":{"Monarch":{"xref_id":"0025517"}}}


id: GO:0090443
data:
  {"annotated_genes":["SJAG_06270","SJAG_03508","SJAG_04455","SJAG_02514","SJAG_01790","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92652,94831,100452,104194,106693,109316],"is_not":false,"summary":null,"term":"GO:0090443"}]},"cv_name":"cellular_component","definition":"A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole body.","definition_xrefs":["PMID:21561862","PMID:22119525","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FAR/SIN/STRIPAK complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FAR complex","type":"related"},{"name":"SIN inhibitory phosphatase (SIP) complex","type":"exact"},{"name":"SIN inhibitory phosphatase complex","type":"exact"},{"name":"SIP complex","type":"exact"},{"name":"STRIPAK signalling complex","type":"related"},{"name":"striatin interacting phosphatase and kinase complex","type":"exact"}],"termid":"GO:0090443","terms_by_termid":{"GO:0090443":null}}


id: MONDO:0017417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, developmental defect during embryogenesis syndrome characterized by the triad of pancreatic fibrosis (and cysts, with a reduction of parenchymal tissue), renal dysplasia (with peripheral cortical cysts, primitive collecting ducts, glomerular cysts and metaplastic cartilage) and hepatic dysgenesis (enlarged portal areas containing numerous elongated binary profiles with a tendency to perilobular fibrosis). Situs abnormalities, skeletal anomalies and anencephaly have also been associated. Patients that survive the neonatal period present renal insufficiency, chronic jaundice and insulin-dependant diabetes.","definition_xrefs":["Orphanet:294415"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic visceral malformation (obsolete MONDO:0015214)","termid":"MONDO:0015214"},{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-hepatic-pancreatic dysplasia","secondary_identifiers":["OMIMPS:208540","SCTID:763891005","MEDGEN:382215","UMLS:C2673883","GARD:17356","DOID:0060259"],"synonyms":[{"name":"Ivemark II syndrome","type":"exact"},{"name":"Ivemark's syndrome","type":"exact"},{"name":"Renohepaticopancreatic dysplasia","type":"exact"}],"termid":"MONDO:0017417","xrefs":{"Monarch":{"xref_id":"0017417"}}}


id: GO:0061932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of erythrocyte enucleation.","definition_xrefs":["PMID:25241935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of erythrocyte enucleation","termid":"GO:0061930"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"erythrocyte enucleation","termid":"GO:0043131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte enucleation","termid":"GO:0061932"}


id: PBO:0111837
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HP1/CBX family","termid":"PBO:0111837"}


id: PBO:0053019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 pseudogene 1","termid":"PBO:0053019"}


id: PBO:0076222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit pseudogene","termid":"PBO:0076222"}


id: PBO:0047753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, beta","termid":"PBO:0047753"}


id: PBO:0077097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8A","termid":"PBO:0077097"}


id: PBO:0030361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_hypoxia","termid":"PBO:0030361"}


id: PBO:0071421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 27","termid":"PBO:0071421"}


id: MOD:01102
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00504. Remap to MOD:00504.","definition_xrefs":["DeltaMass:348"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01102 myristoylation-4H (two double bonds) (obsolete MOD:01102)","termid":"MOD:01102"}


id: PBO:0081291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 74","termid":"PBO:0081291"}


id: PBO:0062170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 13","termid":"PBO:0062170"}


id: GO:0071042
data:
  {"annotated_genes":["SJAG_01818","SJAG_04818","SJAG_04006","SJAG_04321","SJAG_03179","SJAG_03745","SJAG_04824","SJAG_01521","SJAG_04084","SJAG_04153","SJAG_00854","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91449,92274,95112,96442,101264,103578,104423,105626,106616,114578,115019,117425],"is_not":false,"summary":null,"term":"GO:0071042"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target mRNA.","definition_xrefs":["PMID:18644474","PMID:16431988","PMID:17643380","GOC:dgf","PMID:15828860","GOC:krc","PMID:18000032","PMID:15145828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation-dependent mRNA catabolic process","termid":"GO:0071047"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent mRNA catabolic process","type":"related"}],"termid":"GO:0071042","terms_by_termid":{"GO:0071042":null}}


id: PBO:0079194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 23, pseudogene","termid":"PBO:0079194"}


id: MONDO:0015157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human herpesvirus 8-related tumor","secondary_identifiers":["Orphanet:102024","GARD:19830","MEDGEN:1843228","UMLS:C5680371"],"synonyms":[{"name":"HHV-8-related disorder","type":"exact"}],"termid":"MONDO:0015157","xrefs":{"Monarch":{"xref_id":"0015157"}}}


id: PBO:0051293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-16","termid":"PBO:0051293"}


id: GO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses fatty-acyl-CoA synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005829","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"fatty-acyl-CoA synthase complex","synonyms":[{"name":"fatty acyl CoA synthase complex","type":"exact"}],"termid":"GO:0005836"}


id: PBO:0073874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 2","termid":"PBO:0073874"}


id: GO:0140669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of production of oxytocin.","definition_xrefs":["PMID:25096581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of oxytocin production","termid":"GO:0140667"},{"relation_name":"negatively_regulates","term_name":"oxytocin production","termid":"GO:0036162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxytocin production","termid":"GO:0140669"}


id: GO:2000053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000053)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000053"}


id: GO:0062205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-copalyl diphosphate = diphosphate + miltiradiene.","definition_xrefs":["RHEA:33983","PMID:24990389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"miltiradiene synthase activity","secondary_identifiers":["EC:4.2.3.131","MetaCyc:RXN-13338","GO:0102353"],"synonyms":[{"name":"multiradiene synthase activity","type":"related"}],"termid":"GO:0062205"}


id: PBO:0084117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-like protein encoded within the telomeric Y' element; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084117"}


id: PBO:0070612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 80","termid":"PBO:0070612"}


id: MONDO:0009012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant hyperthermia-arthrogryposis-torticollisis an extremely rare arthrogryposis syndrome, described in only two pairs of siblings from two unrelated families to date, and characterized by the association of arthrogryposis, congenital torticollis, dysmorphic facial features (i.e. asymmetry of the face, myopathic facial movements, ptosis, posteriorly rotated ears, cleft palate), progressive scoliosis and episodes of malignant hyperthermia. There have been no further descriptions in the literature since 1988.","definition_xrefs":["Orphanet:2215"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"multiple pterygium-malignant hyperthermia syndrome","secondary_identifiers":["OMIM:217150","MEDGEN:347490","UMLS:C1857576","GARD:3361","MESH:C565679"],"synonyms":[{"name":"contractures, congenital, torticollis, and malignant hyperthermia","type":"related"},{"name":"froster-Iskenius-Waterson syndrome","type":"related"},{"name":"froster-Iskenius-Waterson-Hall syndrome","type":"exact"},{"name":"malignant hyperthermia - arthrogryposis - torticollis","type":"related"},{"name":"malignant hyperthermia arthrogryposis torticollis","type":"related"},{"name":"malignant hyperthermia-arthrogryposis-torticollis syndrome","type":"exact"}],"termid":"MONDO:0009012","xrefs":{"Monarch":{"xref_id":"0009012"}}}


id: PBO:0073940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC18A2 antisense RNA 1","termid":"PBO:0073940"}


id: PBO:0081498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 396","termid":"PBO:0081498"}


id: PBO:0045912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 8","termid":"PBO:0045912"}


id: PBO:0087122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-H2 domain core subunit of multiple ubiquitin ligase complexes; subunit of Skp1-Cullin-F-box (SCF) that tethers the Cdc34p (E2) and Cdc53p (cullin) SCF subunits, and is required for degradation of Gic2p, Far1p, Sic1p and Cln2p; subunit of the Rtt101p-Mms1p-Mms22p ubiquitin ligase that stabilizes replication forks after DNA lesions; subunit of the Cul3p-Elc1p-Ela1p ubiquitin ligase involved in Rpb1p degradation as part of transcription-coupled repair","termid":"PBO:0087122"}


id: PBO:0071135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 137","termid":"PBO:0071135"}


id: PR:Q10207
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D1.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D1.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.01","synonyms":[{"name":"Spom972h-SPBC17D1.01","type":"exact"}],"termid":"PR:Q10207"}


id: PBO:0090668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR domain protein, DNAJC7 family","termid":"PBO:0090668"}


id: MONDO:0020331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Indolent systemic mastocytosis (ISM) is a benign form of systemic mastocytosis (SM) characterized by an abnormal proliferation of mast cells either only in bone marrow or in numerous tissues.","definition_xrefs":["Orphanet:98848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mastocytosis","termid":"MONDO:0016586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"indolent systemic mastocytosis","secondary_identifiers":["MedDRA:10056452","icd11.foundation:353283231","MEDGEN:82897","DOID:4660","GARD:19595","ICDO:9741/1","NCIT:C9286","ONCOTREE:ISM","UMLS:C0272203","SCTID:70910003"],"synonyms":[{"name":"ISM","type":"exact"},{"name":"indolent systemic mastocytosis (morphologic abnormality)","type":"exact"},{"name":"ism","type":"exact"}],"termid":"MONDO:0020331","xrefs":{"Monarch":{"xref_id":"0020331"}}}


id: PBO:0078392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 2-1","termid":"PBO:0078392"}


id: GO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When methionine is used as the substrate, 3-methylthiopropanoate is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0008150","GO:0044281","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"methionine catabolic process to 3-methylthiopropanoate","termid":"GO:0000954"}


id: PBO:0087005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein (RhoGAP); stimulates the intrinsic GTPase activity of Rho1p, which plays a bud growth by regulating actin cytoskeleton organization and cell wall biosynthesis, resulting in the downregulation of Rho1p; structurally and functionally related to Sac7p; BAG7 has a paralog, SAC7, that arose from the whole genome duplication","termid":"PBO:0087005"}


id: PBO:0077922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 13","termid":"PBO:0077922"}


id: MONDO:0004476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare, usually aggressive, primary thymic carcinoma, characterized by the presence of tumor cells morphologically resembling soft tissue sarcoma.","definition_xrefs":["NCIT:C6463"],"gene_count":0,"genotype_count":0,"name":"obsolete thymus sarcomatoid carcinoma (obsolete MONDO:0004476)","termid":"MONDO:0004476","xrefs":{"Monarch":{"xref_id":"0004476"}}}


id: PBO:0089134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"client-loading PAQosome cofactor","termid":"PBO:0089134"}


id: PBO:0051068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4/OR15-4B (non-functional)","termid":"PBO:0051068"}


id: PBO:0051906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha E","termid":"PBO:0051906"}


id: GO:1900450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutamate receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"negatively_regulates","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamate receptor signaling pathway","synonyms":[{"name":"down regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"down regulation of glutamate signaling pathway","type":"exact"},{"name":"down regulation of glutamate signalling pathway","type":"exact"},{"name":"down-regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"down-regulation of glutamate signaling pathway","type":"exact"},{"name":"down-regulation of glutamate signalling pathway","type":"exact"},{"name":"downregulation of glutamate receptor signaling pathway","type":"exact"},{"name":"downregulation of glutamate signaling pathway","type":"exact"},{"name":"downregulation of glutamate signalling pathway","type":"exact"},{"name":"inhibition of glutamate receptor signaling pathway","type":"narrow"},{"name":"inhibition of glutamate signaling pathway","type":"exact"},{"name":"inhibition of glutamate signalling pathway","type":"exact"},{"name":"negative regulation of glutamate signaling pathway","type":"exact"},{"name":"negative regulation of glutamate signalling pathway","type":"exact"}],"termid":"GO:1900450"}


id: GO:0039575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host TYK2 (tyrosine kinase 2) activity by stopping, preventing or reducing phosphorylation and thereby activation of TYK2.","definition_xrefs":["PMID:16987978","PMID:19254804","PMID:10523853"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host TYK2 activity by negative regulation of TYK2 tyrosine phosphorylation (obsolete GO:0039575)","synonyms":[{"name":"inhibition by virus of host TYK2 activation","type":"broad"},{"name":"inhibition by virus of host TYK2 phosphorylation","type":"exact"}],"termid":"GO:0039575"}


id: GO:0033821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-glucosyl residue from UDP-glucose to a hydroxymethylcytosine residue in DNA.","definition_xrefs":["EC:2.4.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"DNA beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.27-RXN"],"synonyms":[{"name":"T4 phage beta-glucosyltransferase activity","type":"related"},{"name":"T4-HMC-beta-glucosyl transferase activity","type":"related"},{"name":"T4-beta-glucosyl transferase activity","type":"related"},{"name":"UDP glucose-DNA beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:DNA beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:DNA beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-deoxyribonucleate beta-glucosyltransferase activity","type":"related"}],"termid":"GO:0033821"}


id: GO:0032136
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97372],"is_not":false,"summary":null,"term":"GO:0032136"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing an A/C mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"adenine/cytosine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"A/C mispair binding","type":"exact"},{"name":"C/A mispair binding","type":"exact"},{"name":"cytosine/adenine mispair binding","type":"related"}],"termid":"GO:0032136","terms_by_termid":{"GO:0032136":null}}


id: MONDO:0009496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kniest-like dysplasia with pursed lips and ectopia lentis","secondary_identifiers":["OMIM:245160","UMLS:C1855606","MEDGEN:343394"],"synonyms":[{"name":"Kniest-like dysplasia with pursed lips and ectopia lentis","type":"exact"},{"name":"burton syndrome","type":"related"}],"termid":"MONDO:0009496","xrefs":{"Monarch":{"xref_id":"0009496"}}}


id: PBO:0039239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activated leukocyte cell adhesion molecule","termid":"PBO:0039239"}


id: PBO:0051990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"janus kinase and microtubule interacting protein 2","termid":"PBO:0051990"}


id: PBO:0046071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 2","termid":"PBO:0046071"}


id: MONDO:0025155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic syndrome, bovine (obsolete MONDO:0025155)","termid":"MONDO:0025155","xrefs":{"Monarch":{"xref_id":"0025155"}}}


id: MONDO:0019493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult heart tumor refers to neoplasms of the heart that manifest in adults and generally present with a variety of non-specific manifestations (depending on tumor site and infiltration) such as weight loss, exhaustion, hemorrhagic pericardial effusion, heart failure, arrhythmias, and embolisms, or that can also be asymptomatic. In adults 75% of heart tumors are benign, with myxoma being the most common benign tumor (accounting for 50-70% of all primary heart tumors) and rhabdomyosarcoma comprising 75% of malignant heart tumors. Other malignant tumors of the heart include fibrosarcoma and leiomyosarcoma (see these terms).","definition_xrefs":["Orphanet:874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"primary adult heart tumor","secondary_identifiers":["GARD:18709","UMLS:C4275152","SCTID:715403006","ICD10CM:D15.1","MEDGEN:900582"],"synonyms":[{"name":"adult cardiac tumor","type":"exact"},{"name":"adult cardiac tumour","type":"exact"},{"name":"adult heart tumor","type":"exact"},{"name":"adult heart tumour","type":"exact"}],"termid":"MONDO:0019493","xrefs":{"Monarch":{"xref_id":"0019493"}}}


id: GO:0099633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the membrane adjacent to a postsynaptic specialization (e.g. post synaptic density).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic membrane","termid":"GO:1903539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to postsynaptic specialization membrane","synonyms":[{"name":"protein localisation in postsynaptic specialization membrane","type":"exact"}],"termid":"GO:0099633"}


id: FYPO:0004032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at ribosomal DNA repeat regions is increased.","definition_xrefs":["PomBase:mah","PMID:25392932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at ncRNA genes","termid":"FYPO:0007011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at rDNA","synonyms":[{"name":"increased protein localisation to chromatin at rDNA","type":"exact"},{"name":"increased protein localization to chromatin at rDNA during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at rDNA during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at rRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at ribosomal DNA","type":"exact"}],"termid":"FYPO:0004032"}


id: PBO:0077425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161B pseudogene 1","termid":"PBO:0077425"}


id: PBO:0075102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 151","termid":"PBO:0075102"}


id: PBO:0048878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member D","termid":"PBO:0048878"}


id: SO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MNV that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"substitution_artifact","termid":"SO:0002176"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNV_artifact","synonyms":[{"name":"MNV artifact","type":"exact"}],"termid":"SO:0002179"}


id: PBO:0069222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 477, pseudogene","termid":"PBO:0069222"}


id: PR:O94652
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleoporin GLE1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12960:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin gle1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.05","secondary_identifiers":["UniProtKB:O94652"],"synonyms":[{"name":"RNA export factor gle1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC31E1.05","type":"related"},{"name":"Spom972h-GLE1","type":"exact"},{"name":"nuclear pore protein gle1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94652"}


id: GO:0052762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gellan = n beta-D-4-deoxy-delta4,5-GlcAp-(1->4)-beta-D-Glcp-(1->4)-alpha-L-Rhap-(1->3)-beta-D-Glcp. This reaction is the eliminative cleavage of beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyluronate bonds of gellan backbone, releasing tetrasaccharides containing a 4-deoxy-4,5-unsaturated D-glucopyranosyluronic acid at the non-reducing end; in the product, the abbreviations are D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).","definition_xrefs":["GOC:mengo_curators","MetaCyc:RXN-12269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"gellan lyase activity","secondary_identifiers":["EC:4.2.2.25"],"termid":"GO:0052762"}


id: GO:0034901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan hydroxyether = endosulfan lactone + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan hydroxyether dehydrogenase activity (obsolete GO:0034901)","termid":"GO:0034901"}


id: GO:0045999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of ecdysteroid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid secretion","termid":"GO:0007555"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid secretion","termid":"GO:0045457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of ecdysteroid secretion","synonyms":[{"name":"down regulation of ecdysteroid secretion","type":"exact"},{"name":"down-regulation of ecdysteroid secretion","type":"exact"},{"name":"downregulation of ecdysteroid secretion","type":"exact"},{"name":"inhibition of ecdysteroid secretion","type":"narrow"}],"termid":"GO:0045999"}


id: GO:0071186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v4 and protocadherin-gamma-b2, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"protocadherin-alpha-v4-protocadherin-gamma-b2 complex","synonyms":[{"name":"Pcdhga1-Pcdhgb2 complex","type":"narrow"}],"termid":"GO:0071186"}


id: MONDO:1011042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary lightly pigmented coat, lips and nose and blue eyes in dogs due to a variation in the OCA2 gene.","definition_xrefs":["PMID:28973042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, OCA2-related, dog","secondary_identifiers":["OMIA:002130-9615"],"termid":"MONDO:1011042","xrefs":{"Monarch":{"xref_id":"1011042"}}}


id: PBO:0063056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) specific ribonuclease subunit PAN3","termid":"PBO:0063056"}


id: GO:0000578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a pattern along a line or a point in an embryo.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic axis specification","synonyms":[{"name":"embryonic axis determination","type":"related"}],"termid":"GO:0000578"}


id: GO:0000212
data:
  {"annotated_genes":["SJAG_03073","SJAG_02529","SJAG_01215","SJAG_01613","SJAG_04901","SJAG_03915","SJAG_04745","SJAG_01805","SJAG_01546","SJAG_01760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108002],"is_not":false,"summary":null,"term":"GO:0000212"},{"annotations":[95964,98417,93968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090306"},{"annotations":[100616],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051232"},{"annotations":[100617,98418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"},{"annotations":[92994,114257],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990395"},{"annotations":[96067,113063,90501],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_03073":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"meiotic spindle organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043147"],"synonyms":[{"name":"meiotic spindle organisation","type":"exact"},{"name":"meiotic spindle organization and biogenesis","type":"related"},{"name":"meiotic spindle stabilization","type":"related"},{"name":"spindle organization during meiosis","type":"exact"}],"termid":"GO:0000212","terms_by_termid":{"GO:0000212":null,"GO:0051232":null,"GO:0090306":null,"GO:0140642":null,"GO:1902441":null,"GO:1990395":null}}


id: PBO:0066560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling like 1","termid":"PBO:0066560"}


id: _global:promoter_of
data:
  {"annotation_feature_type":"gene","cv_name":"SO_feature_relations","definition":"Relation between a promoter and a gene.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_of","termid":"_global:promoter_of"}


id: GO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of (1->3)-beta-D-mannosidic linkages in mannans, releasing mannose.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mannan 1,3-beta-mannosidase activity (obsolete GO:0052789)","termid":"GO:0052789"}


id: PBO:0061043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 4","termid":"PBO:0061043"}


id: PBO:0091566
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-Related Protein","termid":"PBO:0091566"}


id: PBO:0056989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR31 host gene","termid":"PBO:0056989"}


id: PBO:0084973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glycerol-3-phosphate dehydrogenase; key enzyme of glycerol synthesis, essential for growth under osmotic stress; expression regulated by high-osmolarity glycerol response pathway; protein abundance increases in response to DNA replication stress; constitutively inactivated via phosphorylation by the protein kinases Ypk1p and Ypk2p, dephosphorylation increases catalytic activity; forms a heterodimer with Pnc1p to facilitate its peroxisomal import","termid":"PBO:0084973"}


id: PBO:0039121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allograft inflammatory factor 1","termid":"PBO:0039121"}


id: GO:0035440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tuberculosinol (halima-5,6,dien-15-ol), a secondary metabolite in Mycobacteria.","definition_xrefs":["MetaCyc:PWY-5935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tuberculosinol biosynthetic process","synonyms":[{"name":"halima-5,6,dien-15-ol biosynthesis","type":"exact"},{"name":"halima-5,6,dien-15-ol biosynthetic process","type":"exact"},{"name":"tuberculosinol biosynthesis","type":"exact"}],"termid":"GO:0035440"}


id: GO:0052817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very long-chain fatty acyl-CoA + H2O = a very long-chain fatty acid + CoA + H+. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["RHEA:67072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"very long-chain fatty acyl-CoA hydrolase activity","synonyms":[{"name":"very long-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"very long-chain acyl-thioester hydrolase activity","type":"related"},{"name":"very long-chain hydrolase activity","type":"related"},{"name":"very long-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052817"}


id: PBO:0047503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fer-1 like family member 4 (pseudogene)","termid":"PBO:0047503"}


id: PBO:0027313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_template_switch-mediated_chromosomal_rearrangement_during_replication_fork_processing","termid":"PBO:0027313"}


id: SO:0002149
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 15th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:24316985","PMID:19385636","PMID:27087541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK15_acetylation_site","synonyms":[{"name":"H2A.ZK15ac","type":"exact"},{"name":"H2AZK15 acetylation site","type":"exact"},{"name":"H2AZK15ac","type":"exact"}],"termid":"SO:0002149"}


id: GO:0009454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to environmental oxygen.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerotaxis","synonyms":[{"name":"taxis in response to atmospheric oxygen","type":"exact"}],"termid":"GO:0009454"}


id: PBO:0002734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase subunit Bgs3","termid":"PBO:0002734"}


id: FYPO:0001929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to hydroxyurea is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to hydroxyurea","termid":"FYPO:0001926"},{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000298","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to hydroxyurea","synonyms":[{"name":"normal cell cycle arrest in response to HU","type":"narrow"},{"name":"normal cell cycle delay following hydroxyurea exposure","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to HU","type":"exact"},{"name":"normal cell cycle regulation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to hydroxyurea","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0001929"}


id: PBO:0063505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase regulatory subunit","termid":"PBO:0063505"}


id: PBO:0068723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 12, pseudogene","termid":"PBO:0068723"}


id: GO:2001299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N(omega),N(omega)-dimethyl-L-arginine, a methyl-L-arginine having two methyl groups both attached to the primary amino moiety of the guanidino group.","definition_xrefs":["PMID:10510241","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"N(omega),N(omega)-dimethyl-L-arginine metabolic process","termid":"GO:2001298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"N(omega),N(omega)-dimethyl-L-arginine catabolic process","synonyms":[{"name":"N(omega),N(omega)-dimethyl-L-arginine breakdown","type":"exact"},{"name":"N(omega),N(omega)-dimethyl-L-arginine catabolism","type":"exact"},{"name":"N(omega),N(omega)-dimethyl-L-arginine degradation","type":"exact"}],"termid":"GO:2001299"}


id: GO:1903635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of leucine-tRNA ligase activity.","definition_xrefs":["PMID:2280766","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of leucine-tRNA ligase activity (obsolete GO:1903635)","synonyms":[{"name":"activation of L-leucine:tRNALeu ligase (AMP-forming)","type":"narrow"},{"name":"activation of leucine translase activity","type":"narrow"},{"name":"activation of leucine-tRNA ligase activity","type":"narrow"},{"name":"activation of leucine-tRNA synthetase activity","type":"narrow"},{"name":"activation of leucyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of leucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of leucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of leucyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"positive regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of leucine translase activity","type":"exact"},{"name":"positive regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"up regulation of leucine translase activity","type":"exact"},{"name":"up regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"up regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"up regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up-regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of leucine translase activity","type":"exact"},{"name":"up-regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"upregulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"upregulation of leucine translase activity","type":"exact"},{"name":"upregulation of leucine-tRNA ligase activity","type":"exact"},{"name":"upregulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"upregulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1903635"}


id: PBO:0111840
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARID domain","termid":"PBO:0111840"}


id: GO:0042634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair.","definition_xrefs":["PMID:12230507","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"hair cycle","termid":"GO:0042633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hair cycle","termid":"GO:0042634"}


id: PR:O42905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rti1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair and recombination protein rti1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.14","synonyms":[{"name":"Spom972h-rti1","type":"exact"},{"name":"rad twenty-two isogene 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rad22 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42905"}


id: PBO:0066969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 271","termid":"PBO:0066969"}


id: GO:0019322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pentose biosynthetic process","synonyms":[{"name":"pentose anabolism","type":"exact"},{"name":"pentose biosynthesis","type":"exact"},{"name":"pentose formation","type":"exact"},{"name":"pentose synthesis","type":"exact"}],"termid":"GO:0019322"}


id: PBO:0016914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-UTP complex subint Utp8 (predicted)","termid":"PBO:0016914"}


id: PBO:0045898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic elongation factor 2 kinase","termid":"PBO:0045898"}


id: PBO:0002837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Rgf2","termid":"PBO:0002837"}


id: PBO:0082302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asn rich cytoplasmic protein that contains RGG motifs; high-copy suppressor of group II intron-splicing defects of a mutation in MRS2 and of a conditional mutation in POL1 (DNA polymerase alpha); possible role in mitochondrial mRNA splicing","termid":"PBO:0082302"}


id: GO:1901898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:19708671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of relaxation of muscle","termid":"GO:1901078"},{"relation_name":"is_a","term_name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"},{"relation_name":"negatively_regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of relaxation of cardiac muscle","synonyms":[{"name":"down regulation of relaxation of cardiac muscle","type":"exact"},{"name":"down-regulation of relaxation of cardiac muscle","type":"exact"},{"name":"downregulation of relaxation of cardiac muscle","type":"exact"},{"name":"inhibition of relaxation of cardiac muscle","type":"narrow"}],"termid":"GO:1901898"}


id: GO:0021614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve development","termid":"GO:0021563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve maturation","synonyms":[{"name":"CN IX maturation","type":"related"}],"termid":"GO:0021614"}


id: PR:O74830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1183.02 gene.","definition_xrefs":["UniProtKB:O74830","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase C1183.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.02","synonyms":[{"name":"Spom972h-SPCC1183.02","type":"exact"}],"termid":"PR:O74830"}


id: PBO:0071887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 25","termid":"PBO:0071887"}


id: PBO:0076084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin 4","termid":"PBO:0076084"}


id: PBO:0030422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sterol_binding","termid":"PBO:0030422"}


id: PBO:0045576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 29","termid":"PBO:0045576"}


id: GO:1902523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:21931591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein K63-linked ubiquitination","termid":"GO:1900044"},{"relation_name":"is_a","term_name":"positive regulation of protein polyubiquitination","termid":"GO:1902916"},{"relation_name":"positively_regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein K63-linked ubiquitination","synonyms":[{"name":"activation of protein K63-linked polyubiquitination","type":"narrow"},{"name":"activation of protein K63-linked ubiquitination","type":"narrow"},{"name":"positive regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"up regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"up regulation of protein K63-linked ubiquitination","type":"exact"},{"name":"up-regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"up-regulation of protein K63-linked ubiquitination","type":"exact"},{"name":"upregulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"upregulation of protein K63-linked ubiquitination","type":"exact"}],"termid":"GO:1902523"}


id: PBO:0047375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 6","termid":"PBO:0047375"}


id: MONDO:0850094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"},{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced hearing loss","secondary_identifiers":["DOID:0070310"],"termid":"MONDO:0850094","xrefs":{"Monarch":{"xref_id":"0850094"}}}


id: GO:0090244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state that contributes to somitogenesis.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Wnt signaling pathway involved in somitogenesis","synonyms":[{"name":"Wnt receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"Wnt receptor signalling","type":"exact"},{"name":"Wnt-activated signaling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:0090244"}


id: PBO:0080368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanin 2","termid":"PBO:0080368"}


id: FYPO:0004412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase is the stage of mitosis in which chromosomes separate and migrate towards the poles of the spindle.","definition_xrefs":["GO:0000090","GO:1902967","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle midzone","termid":"FYPO:0003484"},{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle during mitosis","termid":"FYPO:0004754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone during anaphase","synonyms":[{"name":"abolished protein localization to spindle midzone during anaphase during mitotic cell cycle","type":"exact"},{"name":"protein absent from mitotic spindle midzone during anaphase","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished during anaphase","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished during anaphase","type":"exact"},{"name":"protein localization to spindle midzone abolished during anaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004412"}


id: MONDO:1012331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laminitis, non-human animal","termid":"MONDO:1011767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminitis, cattle","secondary_identifiers":["OMIA:001225-9913"],"termid":"MONDO:1012331","xrefs":{"Monarch":{"xref_id":"1012331"}}}


id: MONDO:0012971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microvascular complications of diabetes, susceptibility in which the cause of the disease is a mutation in the HFE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvascular complications of diabetes, susceptibility","termid":"MONDO:0000065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvascular complications of diabetes, susceptibility to, 7","secondary_identifiers":["MEDGEN:382123","UMLS:C2673520","OMIM:612635"],"synonyms":[{"name":"HFE microvascular complications of diabetes, susceptibility","type":"exact"},{"name":"MVCD7","type":"related"},{"name":"microvascular complications of diabetes 7","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility caused by mutation in HFE","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, 7","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, type 7","type":"exact"},{"name":"nephropathy, diabetic, susceptibility to","type":"related"},{"name":"nonproliferative retinopathy, diabetic, susceptibility to","type":"related"},{"name":"proliferative retinopathy, diabetic, susceptibility to","type":"related"}],"termid":"MONDO:0012971","xrefs":{"Monarch":{"xref_id":"0012971"}}}


id: PBO:0088241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S41","termid":"PBO:0088241"}


id: FYPO:0007186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular reactive oxygen species level during vegetative growth","termid":"FYPO:0003004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea","synonyms":[{"name":"increased ROS accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular ROS accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular ROS level during cellular response to hydroxyurea","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to HU","type":"exact"},{"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007186"}


id: PBO:0049989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 2","termid":"PBO:0049989"}


id: PBO:0049763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4B","termid":"PBO:0049763"}


id: PR:Q09889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.15c gene.","definition_xrefs":["UniProtKB:Q09889","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain-containing protein C584.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.15c","synonyms":[{"name":"Spom972h-SPCC584.15c","type":"exact"}],"termid":"PR:Q09889"}


id: PBO:0087520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex; which is required for modification of wobble nucleosides in tRNA; required for Elongator structural integrity; null mutation is functionally complemented by human ELP4","termid":"PBO:0087520"}


id: GO:0050186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + H2O = adenosine 3',5'-bisphosphate + sulfate.","definition_xrefs":["EC:3.6.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides","termid":"GO:0016819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphoadenylylsulfatase activity","secondary_identifiers":["MetaCyc:PHOSPHOADENYLYLSULFATASE-RXN","RHEA:11232"],"synonyms":[{"name":"3'-phosphoadenylylsulfate sulfohydrolase activity","type":"related"},{"name":"3-phosphoadenosine 5-phosphosulfate sulfatase activity","type":"related"},{"name":"3-phosphoadenylyl sulfatase activity","type":"related"},{"name":"PAPS sulfatase activity","type":"related"},{"name":"phosphoadenylylsulphatase activity","type":"exact"}],"termid":"GO:0050186"}


id: GO:2000273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling receptor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of signaling receptor activity","synonyms":[{"name":"positive regulation of signalling receptor activity","type":"exact"}],"termid":"GO:2000273"}


id: GO:0009856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cascade of biological processes occurring in plants beginning when the pollen lands on the female reproductive organs of a plant and continuing up to, but not including, fertilization, as defined by sperm-egg cell fusion.","definition_xrefs":["GOC:tb","PMID:10973091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"multi-multicellular organism process","termid":"GO:0044706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollination","secondary_identifiers":["Wikipedia:Pollination"],"termid":"GO:0009856"}


id: GO:0010375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process of establishing the non-random spatial arrangement of stomatal complex on the surface of a leaf. The stomatal complex is the stomatal guard cells and their associated epidermal cells.","definition_xrefs":["PMID:17259259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal complex patterning","termid":"GO:0010375"}


id: PBO:0063713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 2","termid":"PBO:0063713"}


id: FYPO:0001695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a protease inhibitor. Cells stop growing (and may die) at a concentration of a protease inhibitor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to protease inhibitor","synonyms":[{"name":"hypersensitive to protease inhibitor","type":"exact"},{"name":"sensitive to protease inhibitor during mitotic cell cycle","type":"related"},{"name":"sensitive to protease inhibitor during vegetative growth","type":"exact"}],"termid":"FYPO:0001695"}


id: PBO:0080703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 7A","termid":"PBO:0080703"}


id: GO:0007411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection guidance","termid":"GO:0097485"},{"relation_name":"part_of","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon guidance","secondary_identifiers":["GO:0008040","Wikipedia:Axon_guidance"],"synonyms":[{"name":"axon chemotaxis","type":"related"},{"name":"axon growth cone guidance","type":"narrow"},{"name":"axon pathfinding","type":"exact"}],"termid":"GO:0007411"}


id: PBO:0084865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084865"}


id: PBO:0085364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylanthranilate isomerase; catalyzes the third step in tryptophan biosynthesis; in 2004, the sequence of TRP1 from strain S228C was updated by changing the previously annotated internal STOP (TAA) to serine (TCA); enhances vegetative growth at low and high temperatures when used as an auxotrophic marker in strains such as W303","termid":"PBO:0085364"}


id: GO:0044093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of molecular function","termid":"GO:0044093"}


id: PBO:0079422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 5","termid":"PBO:0079422"}


id: PR:O74319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf73 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit taf73 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.14","synonyms":[{"name":"Spom972h-taf73","type":"exact"},{"name":"TAFII-73 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID 73 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74319"}


id: SO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between +20 and +30 relative to the TSS. Consensus sequence is CSARCSSAACGS. Tends to co-occur with INR motif (SO:0000014). Tends to not occur with DPE motif (SO:0000015) or DMv5 (SO:0001159).","definition_xrefs":["PMID:12537576:15231738","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTE","synonyms":[{"name":"CSARCSSAACGS","type":"narrow"},{"name":"motif ten element","type":"exact"},{"name":"motif_ten_element","type":"exact"}],"termid":"SO:0001162"}


id: PBO:0048860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 5","termid":"PBO:0048860"}


id: PR:Q9P7S2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00343","PANTHER:PTHR10678:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.11","secondary_identifiers":["UniProtKB:Q9P7S2"],"synonyms":[{"name":"Spom972h-PSMD11","type":"exact"}],"termid":"PR:Q9P7S2"}


id: PBO:0065523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 3","termid":"PBO:0065523"}


id: MONDO:0011867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia with cyst, bilateral facial clefts, and limb anomalies","secondary_identifiers":["OMIM:607597","MESH:C564370","MEDGEN:375210","UMLS:C1843492"],"synonyms":[{"name":"microphthalmia with cyst, bilateral facial clefts, and limb anomalies","type":"exact"}],"termid":"MONDO:0011867","xrefs":{"Monarch":{"xref_id":"0011867"}}}


id: GO:0030545
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030546"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"signaling receptor regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"receptor regulator activity","type":"broad"}],"termid":"GO:0030545","terms_by_termid":{"GO:0030546":null}}


id: GO:0052094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a haustorium, a projection from a symbiotic cell or tissue that penetrates the host's tissues for the purpose of obtaining nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of haustorium for nutrient acquisition","synonyms":[{"name":"formation by organism of haustoria for nutrient acquisition from host","type":"exact"},{"name":"formation by organism of haustorium for nutrient acquisition from host","type":"exact"},{"name":"formation by symbiont of haustorium for nutrient acquisition from host","type":"related"}],"termid":"GO:0052094"}


id: GO:0090737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that contributes to the maintenance of proper telomeric length and structure via the activation of telomere shortening pathways that compensate telomerase-dependent excessive telomere elongation. Telomere attrition is mediated by a mechanism which involves the generation of single-stranded C-rich telomeric DNA, and the formation and removal of double-stranded telomeric circular DNA (T-circles). Telomere trimming is an independent pathway to recombination-mediated telomere elongation and the well-documented gradual telomere attrition that accompanies cellular replication.","definition_xrefs":["GOC:nc","PMID:27918544","GOC:BHF_telomere","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}


id: PBO:0071408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 14","termid":"PBO:0071408"}


id: PBO:0055979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 2","termid":"PBO:0055979"}


id: MONDO:0006443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tenosynovial giant cell tumor (obsolete MONDO:0006443)","termid":"MONDO:0006443","xrefs":{"Monarch":{"xref_id":"0006443"}}}


id: PBO:0004454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3a","termid":"PBO:0004454"}


id: GO:0042286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-4-amino-5-oxopentanoate = 5-aminolevulinate.","definition_xrefs":["RHEA:14265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase activity","secondary_identifiers":["MetaCyc:GSAAMINOTRANS-RXN","KEGG_REACTION:R02272","EC:5.4.3.8"],"synonyms":[{"name":"(S)-4-amino-5-oxopentanoate 4,5-aminomutase activity","type":"related"},{"name":"glutamate-1-semialdehyde aminotransferase activity","type":"related"}],"termid":"GO:0042286"}


id: PBO:0111909
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repxeat protein","termid":"PBO:0111909"}


id: GO:0140221
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Host-derived membrane of a pathogen-containing vacuole.","definition_xrefs":["PMID:10560000","PMID:26842840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"pathogen-containing vacuole","termid":"GO:0140220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pathogen-containing vacuole membrane","synonyms":[{"name":"pathogen inclusion membrane","type":"related"},{"name":"pathogen-containing compartment membrane","type":"exact"}],"termid":"GO:0140221"}


id: GO:0034464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ciliary protein complex involved in cilium biogenesis. It consists of at least seven Bardet-Biedl syndrome (BBS) proteins and BBIP10. It moves in association with IFT trains through cilia (likely as an IFT-A/B adaptor or cargo), and is required for the integrity of IFT-A and IFT-B.","definition_xrefs":["PMID:15231740","PMID:26498262","GOC:BHF","PMID:17574030","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BBSome","synonyms":[{"name":"Bardet-Biedl syndrome complex","type":"exact"}],"termid":"GO:0034464"}


id: GO:0010910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of heparan sulfate proteoglycan biosynthesis by an increase in epimerase activity. This epimerase activity catalyzes the reaction that converts D-glucuronate into its diastereoisomer in heparan sulfate.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of heparan sulfate proteoglycan biosynthesis by positive regulation of epimerase activity (obsolete GO:0010910)","termid":"GO:0010910"}


id: PBO:0109653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory MKL1 (MRTFA) interacting lncRNA","termid":"PBO:0109653"}


id: PBO:0070183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 99 pseudogene","termid":"PBO:0070183"}


id: PBO:0029607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vegetative_cell","termid":"PBO:0029607"}


id: FYPO:0000662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified catalytic activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased catalytic activity","termid":"FYPO:0000662"}


id: GO:0006483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-aspartic acid or asparagine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid/asparagine hydroxylation (obsolete GO:0006483)","synonyms":[{"name":"aspartic acid/asparagine hydroxylation","type":"exact"},{"name":"peptidyl-aspartic acid/asparagine hydroxylation","type":"exact"}],"termid":"GO:0006483"}


id: MOD:01726
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01726"}


id: FYPO:0006395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"normal histone H3K9 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006395"}


id: GO:0103089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(6'-methylthio)hexylmalate = 3-(6'-methylthio)hexylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiohexylmalate isomerase activity (obsolete GO:0103089)","termid":"GO:0103089"}


id: MONDO:0014346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary mucosal leukokeratosis","termid":"MONDO:0015748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"white sponge nevus 2","secondary_identifiers":["DOID:0081288","GARD:16012","OMIM:615785","UMLS:C4014321","MEDGEN:862758"],"synonyms":[{"name":"WHITE sponge NEVUS 2","type":"related"},{"name":"WSN2","type":"related"},{"name":"White sponge Nevus type 2","type":"exact"},{"name":"white sponge nevus 2","type":"exact"}],"termid":"MONDO:0014346","xrefs":{"Monarch":{"xref_id":"0014346"}}}


id: PBO:0113489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator of a variety of genes; critical sensor of genotoxic stress; phosphorylation by protein kinase A stimulates Opi1p function in negative regulation of phospholipid biosynthetic genes; involved in telomere maintenance; null exhibits disrupted mitochondrial metabolism and low cardiolipin content, strongly correlated with overproduction of inositol; binds to phosphatidic acid","termid":"PBO:0113489"}


id: PBO:0060837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 pseudogene 1","termid":"PBO:0060837"}


id: GO:0048674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in reformation of a growth cone by the tip of an injured axon, or in collateral sprouting of the axon. Collateral sprouting is the process in which outgrowths develop from the shafts of existing axons.","definition_xrefs":["GOC:dgh","GOC:lm","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"},{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of injured axon","termid":"GO:0048674"}


id: PATO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased curvature","termid":"PATO:0001592"}


id: GO:0090151
data:
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id: PBO:0017740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally controlled tumor protein homolog Tma19/Tpt1","termid":"PBO:0017740"}


id: PBO:0076148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDS3 homolog, SIN3A corepressor complex component","termid":"PBO:0076148"}


id: GO:1905037
data:
  {"annotated_genes":["SJAG_06309","SJAG_04502","SJAG_01283","SJAG_01251","SJAG_04294","SJAG_01274","SJAG_00645","SJAG_01561","SJAG_00114","SJAG_05289","SJAG_03851","SJAG_05017","SJAG_02441","SJAG_04655","SJAG_02640","SJAG_04232","SJAG_01467","SJAG_01876","SJAG_00029","SJAG_02699","SJAG_03100","SJAG_02414"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102765,103773,94011,110833,116939,93824,108576,92108,95831,99166,89288,108921,112969,87040,91826,90821,96783,97067,112777,72087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000045"},{"annotations":[107716,107806],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000786"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an autophagosome.","definition_xrefs":["GOC:TermGenie","PMID:22186024","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00114":null,"SJAG_00645":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01467":null,"SJAG_01561":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02441":null,"SJAG_02640":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04294":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"autophagosome organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"autophagic vacuole organization","type":"exact"},{"name":"initial autophagic vacuole organization","type":"related"}],"termid":"GO:1905037","terms_by_termid":{"GO:0000045":null,"GO:2000786":null}}


id: PBO:0039776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7 pseudogene 1","termid":"PBO:0039776"}


id: MONDO:0016907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 8. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 8q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 8","termid":"MONDO:0016873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 8","secondary_identifiers":["GARD:3770","Orphanet:262065","icd11.foundation:653068448","MEDGEN:208638","MESH:C537828","UMLS:C0795828"],"synonyms":[{"name":"8q deletion","type":"related"},{"name":"8q monosomy","type":"related"},{"name":"chromosome 8q deletion","type":"related"},{"name":"deletion 8q","type":"related"},{"name":"monosomy 8q","type":"related"},{"name":"partial deletion of chromosome 8q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 8","type":"exact"},{"name":"partial monosomy 8q","type":"related"},{"name":"partial monosomy of chromosome 8q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 8","type":"exact"}],"termid":"MONDO:0016907","xrefs":{"Monarch":{"xref_id":"0016907"}}}


id: PBO:0036031
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_degradation_of_ribosomal_proteins_during_vegetative_growth","termid":"PBO:0036031"}


id: PR:Q9P375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19B12.06c gene.","definition_xrefs":["UniProtKB:Q9P375","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized rhomboid protein C19B12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.06c","synonyms":[{"name":"Spom972h-SPAC19B12.06c","type":"exact"}],"termid":"PR:Q9P375"}


id: GO:0044272
data:
  {"annotated_genes":["SJAG_02741","SJAG_03538","SJAG_01139","SJAG_03198","SJAG_03614","SJAG_02406","SJAG_03659","SJAG_02006","SJAG_00982","SJAG_01880","SJAG_03553","SJAG_04007","SJAG_02421","SJAG_04067","SJAG_01935","SJAG_03313","SJAG_00381","SJAG_03881","SJAG_04953","SJAG_00881","SJAG_01466","SJAG_00419","SJAG_03310","SJAG_04459","SJAG_03494","SJAG_00673","SJAG_02290","SJAG_03671","SJAG_02293","SJAG_00427","SJAG_00866","SJAG_03731","SJAG_04305","SJAG_00832","SJAG_02158","SJAG_04288","SJAG_02689","SJAG_03712","SJAG_03362","SJAG_03856","SJAG_04042","SJAG_01970","SJAG_02420","SJAG_00827","SJAG_00988","SJAG_03290","SJAG_04282","SJAG_04425","SJAG_00234","SJAG_02599","SJAG_01351","SJAG_00309","SJAG_01404","SJAG_00395","SJAG_00283","SJAG_02972","SJAG_00582","SJAG_03064","SJAG_01402","SJAG_03152","SJAG_04866","SJAG_04627","SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64848,105151,110231,109648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[97576,92453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[115230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[116181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[107744,113370,94200,117582,86641,87066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[75439,113233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[91423,109745,88583,116182,113971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[101074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[96084,101075,94689,108608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[109649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019343"},{"annotations":[110679,102803,110680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[117303,92506,96210,107586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[109650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[99856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[113066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[94760,99190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[88982,91859,106165,99842,111565,98211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[111821,96362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[106632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[97556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[101913,95837,97724,114918,110233,89231,111110,97606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[112813,88246],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[98226],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[102569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006556"},{"annotations":[113139,115154,93491,106536,112720,98717,112726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[98718,112727,113140,115155,112721,93492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[98720,109591,109592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[106537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The 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id: PBO:0079337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 22","termid":"PBO:0079337"}


id: PBO:0005091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8 (predicted)","termid":"PBO:0005091"}


id: PR:Q8WZJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 35 member B1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10778:SF10","PRO:DNx","OMA:SCHPO02527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transporter homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.11c","secondary_identifiers":["UniProtKB:Q8WZJ9"],"synonyms":[{"name":"Spom972h-SLC35B1","type":"exact"}],"termid":"PR:Q8WZJ9"}


id: GO:0048010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a vascular endothelial growth factor receptor (VEGFR) on the surface of the target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"VEGF receptor signaling pathway","type":"exact"},{"name":"VEGF receptor signalling pathway","type":"exact"},{"name":"VEGFR signaling pathway","type":"exact"}],"termid":"GO:0048010"}


id: GO:0006154
data:
  {"annotated_genes":["SJAG_02959","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86799,86800],"is_not":false,"summary":null,"term":"GO:0006154"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine metabolic process","termid":"GO:0046085"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"adenosine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006156"],"synonyms":[{"name":"adenosine breakdown","type":"exact"},{"name":"adenosine catabolism","type":"exact"},{"name":"adenosine degradation","type":"exact"},{"name":"adenosine phosphorolysis","type":"related"}],"termid":"GO:0006154","terms_by_termid":{"GO:0006154":null}}


id: PBO:0061146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 9","termid":"PBO:0061146"}


id: PBO:0056683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 3","termid":"PBO:0056683"}


id: PBO:0055429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2859","termid":"PBO:0055429"}


id: MONDO:0030876
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84938],"is_not":false,"summary":null,"term":"MONDO:0030876"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardioacrofacial dysplasia","termid":"MONDO:0031386"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"is_obsolete":false,"name":"cardioacrofacial dysplasia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436885","OMIM:619142","MEDGEN:1777656"],"synonyms":[{"name":"CAFD1","type":"exact"},{"name":"cardioacrofacial dysplasia 1","type":"exact"}],"termid":"MONDO:0030876","terms_by_termid":{"MONDO:0030876":null},"xrefs":{"Monarch":{"xref_id":"0030876"}}}


id: PBO:0080546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 5","termid":"PBO:0080546"}


id: PR:O13704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpd1 gene.","definition_xrefs":["UniProtKB:O13704","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C13F5.05, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.05","synonyms":[{"name":"Spom972h-mpd1","type":"exact"}],"termid":"PR:O13704"}


id: GO:0061970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the right sidedness in an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["PMID:18629866","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of left/right asymmetry","termid":"GO:0061968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of right sidedness","termid":"GO:0061970"}


id: MONDO:0020429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"triatrial heart","termid":"MONDO:0015450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cor triatriatum dexter","secondary_identifiers":["ICD9:746.89","HP:0011566","SCTID:274947007","Orphanet:99098","GARD:12483","MEDGEN:488867","UMLS:C0344697"],"synonyms":[{"name":"cor triatriatum dexter","type":"exact"},{"name":"cor triatriatum dexter (disease)","type":"exact"},{"name":"cor triatriatum dextrum","type":"exact"},{"name":"divided right atrium","type":"exact"}],"termid":"MONDO:0020429","xrefs":{"Monarch":{"xref_id":"0020429"}}}


id: CHEBI:84327
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torin 1","termid":"CHEBI:84327"}


id: PR:O13872
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 28 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02052","PANTHER:PTHR12937:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 28 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.07c","secondary_identifiers":["UniProtKB:O13872"],"synonyms":[{"name":"ESCRT-I complex subunit vps28 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-VPS28","type":"exact"}],"termid":"PR:O13872"}


id: PBO:0042384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD276 molecule","termid":"PBO:0042384"}


id: GO:0010813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of neuropeptides. Neuropeptides are signaling peptides that travel across a synaptic junction.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide catabolic process","termid":"GO:0043171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"neuropeptide catabolic process","termid":"GO:0010813"}


id: GO:0044575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a cellulosome, a macromolecular multi-enzyme complex in bacteria that facilitates the breakdown of cellulase, hemicellulase and pectin in the plant cell wall.","definition_xrefs":["PMID:20373916","GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cellulosome assembly","termid":"GO:0044575"}


id: MONDO:0012309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any parietal foramina in which the cause of the disease is a mutation in the ALX4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parietal foramina","termid":"MONDO:0018953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"parietal foramina 2","secondary_identifiers":["MEDGEN:355358","MESH:C566510","GARD:18053","OMIM:609597","UMLS:C1865044"],"synonyms":[{"name":"ALX4 parietal foramina","type":"exact"},{"name":"PFM2","type":"related"},{"name":"parietal foramina 2","type":"exact"},{"name":"parietal foramina caused by mutation in ALX4","type":"exact"},{"name":"parietal foramina type 2","type":"exact"}],"termid":"MONDO:0012309","xrefs":{"Monarch":{"xref_id":"0012309"}}}


id: GO:0006772
data:
  {"annotated_genes":["SJAG_02047","SJAG_02420","SJAG_03538","SJAG_00381","SJAG_04282","SJAG_01970","SJAG_02406","SJAG_04866","SJAG_00827","SJAG_04067","SJAG_01742","SJAG_03362","SJAG_02421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58812,65574,98719],"is_not":false,"summary":null,"term":"GO:0006772"},{"annotations":[112813,88246],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[112720,112726,113139,115154,98717,93491,106536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[98720,109591,109592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"thiamine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Thiamine"],"synonyms":[{"name":"thiamin metabolic process","type":"exact"},{"name":"thiamin metabolism","type":"exact"},{"name":"thiamine metabolism","type":"exact"},{"name":"vitamin B1 metabolic process","type":"exact"},{"name":"vitamin B1 metabolism","type":"exact"}],"termid":"GO:0006772","terms_by_termid":{"GO:0006772":null,"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: PBO:0084893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator specific for the COX3 mRNA; acts together with Pet54p and Pet122p; located in the mitochondrial inner membrane","termid":"PBO:0084893"}


id: PBO:0090193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific cyclin Rem1","termid":"PBO:0090193"}


id: PBO:0067286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 369, pseudogene","termid":"PBO:0067286"}


id: MONDO:0010869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"motor neuron disease with dementia and ophthalmoplegia","secondary_identifiers":["OMIM:600333","UMLS:C1838253","MEDGEN:324986","MESH:C563954"],"synonyms":[{"name":"motor neuron disease with dementia and ophthalmoplegia","type":"exact"}],"termid":"MONDO:0010869","xrefs":{"Monarch":{"xref_id":"0010869"}}}


id: GO:1903755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of SUMO transferase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:PARL","GOC:rl","PMID:19955185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of SUMO transferase activity","termid":"GO:1903182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of SUMO transferase activity","synonyms":[{"name":"activation of SMT3 conjugating enzyme","type":"related"},{"name":"activation of SUMO conjugating enzyme activity","type":"related"},{"name":"activation of SUMO transferase activity","type":"narrow"},{"name":"positive regulation of SMT3 conjugating enzyme","type":"related"},{"name":"positive regulation of SUMO conjugating enzyme activity","type":"related"},{"name":"up regulation of SMT3 conjugating enzyme","type":"related"},{"name":"up regulation of SUMO conjugating enzyme activity","type":"related"},{"name":"up regulation of SUMO transferase activity","type":"exact"},{"name":"up-regulation of SMT3 conjugating enzyme","type":"related"},{"name":"up-regulation of SUMO conjugating enzyme activity","type":"related"},{"name":"up-regulation of SUMO transferase activity","type":"exact"},{"name":"upregulation of SMT3 conjugating enzyme","type":"related"},{"name":"upregulation of SUMO conjugating enzyme activity","type":"related"},{"name":"upregulation of SUMO transferase activity","type":"exact"}],"termid":"GO:1903755"}


id: MONDO:0008783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tangier disease (TD) is a rare lipoprotein metabolism disorder characterized biochemically by an almost complete absence of plasma high-density lipoproteins (HDL), and clinically by liver, spleen, lymph node and tonsil enlargement along with peripheral neuropathy in children and adolescents, and, occasionally, cardiovascular disease in adults.","definition_xrefs":["Orphanet:31150"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"hypolipoproteinemia","termid":"MONDO:0001822"},{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia","termid":"MONDO:0017773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"Tangier disease","secondary_identifiers":["SCTID:723579009","UMLS:C0039292","GARD:7731","MedDRA:10051875","MEDGEN:52644","DOID:1388","NANDO:1200854","NCIT:C85182","NORD:1757","MESH:D013631","OMIM:205400"],"synonyms":[{"name":"A-alphalipoprotein neuropathy","type":"related"},{"name":"ATP-binding cassette transporter A1 deficiency","type":"exact"},{"name":"Alpha high density lipoprotein deficiency disease","type":"related"},{"name":"Analphalipo-proteinemia","type":"related"},{"name":"Analphalipoproteinemia","type":"exact"},{"name":"HDL lipoprotein deficiency disease","type":"related"},{"name":"HDLDT1","type":"related"},{"name":"Tangier disease","type":"exact"},{"name":"cholesterol thesaurismosis","type":"related"},{"name":"defective adenosine triphosphate-binding cassette transporter A1","type":"exact"},{"name":"familial Hypoalphalipo-proteinemia","type":"related"},{"name":"familial alpha-lipoprotein deficiency","type":"exact"},{"name":"familial high density lipoprotein deficiency","type":"exact"},{"name":"familial high density lipoprotein deficiency disease","type":"related"},{"name":"high density lipoprotein deficiency, Tangier type","type":"related"},{"name":"high density lipoprotein deficiency, type 1","type":"related"},{"name":"tgd","type":"related"}],"termid":"MONDO:0008783","xrefs":{"Monarch":{"xref_id":"0008783"}}}


id: GO:0050909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of taste","secondary_identifiers":["Wikipedia:Taste"],"synonyms":[{"name":"gustation","type":"exact"},{"name":"sense of taste","type":"exact"},{"name":"taste","type":"exact"},{"name":"taste perception","type":"exact"}],"termid":"GO:0050909"}


id: PBO:0040405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 6","termid":"PBO:0040405"}


id: PBO:0051115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-69D","termid":"PBO:0051115"}


id: GO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate + H2O = 7,8-dihydroneopterin 3'-phosphate + H+.","definition_xrefs":["GOC:mengo_curators","PMID:19746965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"7,8-dihydro-D-neopterin 2',3'-cyclic phosphate phosphodiesterase activity","termid":"GO:0044688"}


id: PBO:0052214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 1","termid":"PBO:0052214"}


id: PBO:0084127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexaprenyl pyrophosphate synthetase; catalyzes the first step in ubiquinone (coenzyme Q) biosynthesis","termid":"PBO:0084127"}


id: PBO:0067733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 31","termid":"PBO:0067733"}


id: PBO:0028197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hypothemycin","termid":"PBO:0028197"}


id: GO:0100023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates meiotic nuclear division.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of meiotic nuclear division by transcription from RNA polymerase II promoter (obsolete GO:0100023)","termid":"GO:0100023"}


id: PBO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoadipate-semialdehyde dehydrogenase","termid":"PBO:0002210"}


id: PBO:0044110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 69","termid":"PBO:0044110"}


id: GO:2000873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H4 acetylation involved in response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000873)","synonyms":[{"name":"regulation of histone H4 acetylation involved in DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to DNA damage","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to genotoxic stress","type":"exact"}],"termid":"GO:2000873"}


id: GO:0007285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phase of growth and gene expression that male germ cells undergo as they enter the spermatocyte stage. The cells grow in volume and transcribe most of the gene products needed for the morphological events that follow meiosis.","definition_xrefs":["ISBN:0879694238","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary spermatocyte growth","termid":"GO:0007285"}


id: GO:0097307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to farnesol","termid":"GO:0097307"}


id: FYPO:0008112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of U6 snRNP complex assembly is abnormal.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal U6 snRNP assembly","termid":"FYPO:0008112"}


id: PBO:0000627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S8 (predicted)","termid":"PBO:0000627"}


id: PBO:0076412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 6 like","termid":"PBO:0076412"}


id: PBO:0070220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 153 pseudogene","termid":"PBO:0070220"}


id: PBO:0065698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 3","termid":"PBO:0065698"}


id: PBO:0031474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mercury","termid":"PBO:0031474"}


id: GO:1900632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tridecane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane biosynthetic process","termid":"GO:0043447"},{"relation_name":"is_a","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tridecane biosynthetic process","synonyms":[{"name":"tridecane anabolism","type":"exact"},{"name":"tridecane biosynthesis","type":"exact"},{"name":"tridecane formation","type":"exact"},{"name":"tridecane synthesis","type":"exact"}],"termid":"GO:1900632"}


id: PBO:0044376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYMP antisense RNA 1","termid":"PBO:0044376"}


id: PBO:0080322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 86 pseudogene","termid":"PBO:0080322"}


id: PBO:0003297
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary spastic paraplegia","termid":"PBO:0003297"}


id: FYPO:0006590
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the endoplasmic reticulum is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to endoplasmic reticulum","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to endoplasmic reticulum","type":"exact"},{"name":"protein mislocalised to endoplasmic reticulum","type":"exact"},{"name":"protein mislocalized to ER","type":"exact"}],"termid":"FYPO:0006590","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: MONDO:0006420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucosa-associated lymphoid tissue lymphoma (MALT) that arises from the small intestine. The morphologic characteristics are similar to those seen in gastric MALT lymphomas, with the exception of the lymphoepithelial lesions that are less prominent in the small intestine.","definition_xrefs":["NCIT:C5635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine lymphoma","termid":"MONDO:0001852"},{"relation_name":"is_a","term_name":"spleen cancer","termid":"MONDO:0005966"},{"relation_name":"is_a","term_name":"MALT lymphoma","termid":"MONDO:0007650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"small intestinal mucosa-associated lymphoid tissue lymphoma","secondary_identifiers":["MEDGEN:233452","UMLS:C1336004"],"synonyms":[{"name":"MALT lymphoma of small bowel","type":"exact"},{"name":"MALT lymphoma of small intestine","type":"exact"},{"name":"MALT lymphoma of the small bowel","type":"exact"},{"name":"MALT lymphoma of the small intestine","type":"exact"},{"name":"MALToma of small bowel","type":"exact"},{"name":"MALToma of small intestine","type":"exact"},{"name":"MALToma of the small bowel","type":"exact"},{"name":"MALToma of the small intestine","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of small bowel","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of small intestine","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of the small bowel","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of the small intestine","type":"exact"},{"name":"small bowel MALT lymphoma","type":"exact"},{"name":"small bowel MALToma","type":"exact"},{"name":"small bowel mucosa-associated lymphoid tissue lymphoma","type":"exact"},{"name":"small intestinal mucosa-associated lymphoid tissue lymphoma","type":"exact"},{"name":"small intestine MALT lymphoma","type":"exact"},{"name":"small intestine MALToma","type":"exact"},{"name":"small intestine mucosa-associated lymphoid tissue lymphoma","type":"exact"}],"termid":"MONDO:0006420","xrefs":{"Monarch":{"xref_id":"0006420"}}}


id: GO:0009247
data:
  {"annotated_genes":["SJAG_04924","SJAG_03953","SJAG_01416","SJAG_05278","SJAG_00831","SJAG_06383","SJAG_03506","SJAG_04878","SJAG_00846","SJAG_04337","SJAG_00068","SJAG_00295","SJAG_01227","SJAG_03115","SJAG_04881","SJAG_03672","SJAG_02488","SJAG_03801","SJAG_01570","SJAG_04119","SJAG_05311","SJAG_04165","SJAG_01860","SJAG_05327","SJAG_03878","SJAG_03066","SJAG_02913","SJAG_02523","SJAG_03292","SJAG_04913","SJAG_02804","SJAG_02168","SJAG_06425","SJAG_02776","SJAG_04975"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102218,109079,100790,90429,97858,115269,110742,88135,97297,102889,113072,99479,116366,92284,113920,92728,114345,111493,87863,86653,92195,90602,91428,98065,99413,93711,102951,106706,107736,88759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[89946,94447,91005,94927,111671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"membrane lipid biosynthetic process","termid":"GO:0046467"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-401"],"synonyms":[{"name":"glycolipid anabolism","type":"exact"},{"name":"glycolipid biosynthesis","type":"exact"},{"name":"glycolipid formation","type":"exact"},{"name":"glycolipid synthesis","type":"exact"}],"termid":"GO:0009247","terms_by_termid":{"GO:0006506":null,"GO:0051999":null}}


id: PBO:0054293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1684","termid":"PBO:0054293"}


id: PBO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 4","termid":"PBO:0042966"}


id: MONDO:0007126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any spondyloarthropathy, susceptibility to in which the cause of the disease is a mutation in the HLA-B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloarthropathy, susceptibility to","termid":"MONDO:0024512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondyloarthropathy, susceptibility to, 1","secondary_identifiers":["DOID:0080603","UMLS:C1862852","OMIM:106300","MEDGEN:400145"],"synonyms":[{"name":"Bechterew syndrome","type":"related"},{"name":"HLA-B spondyloarthropathy, susceptibility to","type":"exact"},{"name":"Marie-Strumpell spondylitis","type":"related"},{"name":"SPDA1","type":"related"},{"name":"ankylosing spondylitis, susceptibility to","type":"related"},{"name":"spondyloarthropathy, susceptibility to caused by mutation in HLA-B","type":"exact"},{"name":"spondyloarthropathy, susceptibility to, 1","type":"exact"},{"name":"spondyloarthropathy, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to spondyloarthropathy 1","type":"related"}],"termid":"MONDO:0007126","xrefs":{"Monarch":{"xref_id":"0007126"}}}


id: MONDO:0016460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyvalvular heart disease syndrome is a recently described syndrome characterized by the combination of polyvalvular heart disease, short stature, facial anomalies and intellectual deficit.","definition_xrefs":["Orphanet:228410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"polyvalvular heart disease syndrome","secondary_identifiers":["SCTID:723448007","MEDGEN:1376905","UMLS:C4509918","GARD:20594"],"synonyms":[{"name":"PHD syndrome","type":"exact"}],"termid":"MONDO:0016460","xrefs":{"Monarch":{"xref_id":"0016460"}}}


id: FYPO:0002094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is normal (i.e. indistinguishable from wild type) during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion","synonyms":[{"name":"normal sister chromatid cohesion during meiosis","type":"exact"}],"termid":"FYPO:0002094"}


id: PATO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity quality inhering in a bearer by virtue of the bearer's disposition to being susceptible to damage by light.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity","termid":"PATO:0000927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phototoxic","termid":"PATO:0001803"}


id: PBO:0070746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 2","termid":"PBO:0070746"}


id: PBO:0077828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member G, pseudogene","termid":"PBO:0077828"}


id: PBO:0029288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_Mei2_nuclear_dot","termid":"PBO:0029288"}


id: PBO:0045475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal root ganglia homeobox","termid":"PBO:0045475"}


id: PR:O14137
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3C7.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase C7.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.13c","synonyms":[{"name":"G6PD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC3C7.13c","type":"exact"}],"termid":"PR:O14137"}


id: PBO:0087753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; mutation is functionally complemented by the bacterial GatB ortholog","termid":"PBO:0087753"}


id: PBO:0089003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar phytochelatin and glutathione S-conjugate ABC family transmembrane transporter Abc2","termid":"PBO:0089003"}


id: GO:0010310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["PMID:14765119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010310"}


id: PBO:0080068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 33","termid":"PBO:0080068"}


id: PBO:0076174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 5, pseudogene","termid":"PBO:0076174"}


id: GO:1905010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-lysine import into cell.","definition_xrefs":["GO_REF:0000058","PMID:7499219","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-lysine import across plasma membrane","termid":"GO:1905008"},{"relation_name":"positively_regulates","term_name":"L-lysine import across plasma membrane","termid":"GO:0097639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-lysine import across plasma membrane","synonyms":[{"name":"activation of L-lysine import into cell","type":"narrow"},{"name":"positive regulation of L-lysine import into cell","type":"exact"},{"name":"up regulation of L-lysine import into cell","type":"exact"},{"name":"up-regulation of L-lysine import into cell","type":"exact"},{"name":"upregulation of L-lysine import into cell","type":"exact"}],"termid":"GO:1905010"}


id: MONDO:0021485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the iris.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iris neoplasm","termid":"MONDO:0021224"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of iris","secondary_identifiers":["SCTID:189151003","NCIT:C4555","MEDGEN:87560","icd11.foundation:549962833","ICD9:224.0","UMLS:C0346374"],"synonyms":[{"name":"benign iris neoplasm","type":"exact"},{"name":"benign iris tumor","type":"exact"},{"name":"benign iris tumour","type":"exact"},{"name":"benign neoplasm of the iris","type":"exact"},{"name":"benign tumor of iris","type":"exact"},{"name":"benign tumor of the iris","type":"exact"},{"name":"benign tumour of iris","type":"exact"},{"name":"benign tumour of the iris","type":"exact"},{"name":"iris benign neoplasm","type":"exact"}],"termid":"MONDO:0021485","xrefs":{"Monarch":{"xref_id":"0021485"}}}


id: GO:0021507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of the neural folds of the caudal opening of the neural tube. The posterior neuropore appears before the process of neural tube closure is complete.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"cell-cell adhesion involved in neural tube closure","termid":"GO:0060608"},{"relation_name":"part_of","term_name":"neuropore closure","termid":"GO:0021995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"posterior neuropore closure","termid":"GO:0021507"}


id: PBO:0087567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of telomeric Ku complex (Yku70p-Yku80p); involved in telomere length maintenance, structure and telomere position effect; required for localization of telomerase ribonucleoprotein via interaction with TLC1 guide RNA; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair; colocalizes with quiescent cell telomere hyperclusters","termid":"PBO:0087567"}


id: GO:0098765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A meiotic cell cycle phase that occurs after meiosis I (the first meiotic nuclear division).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiosis II cell cycle phase","termid":"GO:0098765"}


id: PBO:0063544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 1 pseudogene 3","termid":"PBO:0063544"}


id: GO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"transverse filament","termid":"GO:0000802"}


id: PBO:0071815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 10","termid":"PBO:0071815"}


id: PBO:0057405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548i-2","termid":"PBO:0057405"}


id: GO:0005784
data:
  {"annotated_genes":["SJAG_00064","SJAG_02208","SJAG_02330","SJAG_00959"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97242,105328,107460,108484],"is_not":false,"summary":null,"term":"GO:0005784"}]},"cv_name":"cellular_component","definition":"A translocon complex that contains a core heterotrimer of conserved alpha, beta and gamma subunits, and may contain additional proteins (translocon-associated proteins or TRAPs); in budding yeast the core proteins are Sec61p, Sbh1p, and Sss1p. The Sec61 translocon complex functions in cotranslational and posttranslational translocation events.","definition_xrefs":["PMID:33960686","GOC:mah","PMID:18166647","PMID:32820719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocon complex","termid":"GO:0071256"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00959":null,"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0032991","GO:0005737","GO:0005789","GO:0005575"],"is_obsolete":false,"name":"Sec61 translocon complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Sec61p-Sbh1p-Sss1p complex","type":"narrow"}],"termid":"GO:0005784","terms_by_termid":{"GO:0005784":null}}


id: GO:1901364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving funalenone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"funalenone metabolic process","synonyms":[{"name":"funalenone metabolism","type":"exact"}],"termid":"GO:1901364"}


id: GO:0103078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + quercetin 3-O-rhamnoside + UDP-L-rhamnose = quercetin-3-rhamnoside-7-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-rhamnoside 7-O-rhamnosyltransferase activity (obsolete GO:0103078)","termid":"GO:0103078"}


id: PBO:0058543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6089","termid":"PBO:0058543"}


id: MONDO:0011530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesomelic dysplasia, Savarirayan type is characterized by severely hypoplastic and triangular-shaped tibiae, and absence of the fibulae. So far, two sporadic cases have been described. Moderate mesomelia of the upper limbs, proximal widening of the ulnas, pelvic anomalies and marked bilateral glenoid hypoplasia were also reported.","definition_xrefs":["Orphanet:85170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"mesomelic dysplasia","termid":"MONDO:0023599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mesomelic dysplasia, Savarirayan type","secondary_identifiers":["MEDGEN:343129","SCTID:715652002","MESH:C565349","OMIM:605274","GARD:10584","UMLS:C1854470","icd11.foundation:1627637820"],"synonyms":[{"name":"mesomelic dysplasia Savarirayan type","type":"related"},{"name":"mesomelic dysplasia with absent fibulas and triangular tibias","type":"exact"},{"name":"mesomelic dysplasia, Savarirayan type","type":"exact"},{"name":"triangular tibia and fibular aplasia","type":"related"},{"name":"triangular tibia-fibular aplasia syndrome","type":"exact"}],"termid":"MONDO:0011530","xrefs":{"Monarch":{"xref_id":"0011530"}}}


id: SO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An SNV that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"substitution_artifact","termid":"SO:0002176"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNV_artifact","synonyms":[{"name":"SNV artifact","type":"exact"}],"termid":"SO:0002178"}


id: PBO:0081761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF691 divergent transcript","termid":"PBO:0081761"}


id: PBO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_binding","termid":"PBO:0031562"}


id: PBO:0027221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_present_in_increased_numbers","termid":"PBO:0027221"}


id: PBO:0028120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_lateral_cortical_node,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028120"}


id: GO:0047176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2,3,6-tetrakis-O-galloyl-beta-D-glucose + 1-O-galloyl-beta-D-glucose = 1,2,3,4,6-pentakis-O-galloyl-beta-D-glucose + D-glucose.","definition_xrefs":["RHEA:19109","EC:2.3.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"beta-glucogallin-tetrakisgalloylglucose O-galloyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04498","MetaCyc:2.3.1.143-RXN"],"synonyms":[{"name":"1-O-galloyl-beta-D-glucose:1,2,3,6-tetrakis-O-galloyl-beta-D-glucose 4-O-galloyltransferase activity","type":"related"},{"name":"beta-glucogallin-tetragalloylglucose 4-galloyltransferase activity","type":"related"},{"name":"beta-glucogallin:1,2,3,6-tetra-O-galloyl-beta-D-glucose 4-O-galloyltransferase activity","type":"related"},{"name":"beta-glucogallin:1,2,3,6-tetra-O-galloylglucose 4-O-galloyltransferase activity","type":"related"}],"termid":"GO:0047176"}


id: GO:0035052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of dorsal vessel cardioblast cells to an aortic cell fate and their capacity to differentiate into aortic cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","PMID:12397110","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"embryonic heart tube anterior/posterior pattern specification","termid":"GO:0035054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal vessel aortic cell fate commitment","termid":"GO:0035052"}


id: GO:0060081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential increases with respect to its steady-state potential, usually from negative potential to a more negative potential. For example, during the repolarization phase of an action potential the membrane potential often becomes more negative or hyperpolarized before returning to the steady-state resting potential.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane hyperpolarization","termid":"GO:0060081"}


id: PBO:0047577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGFR1 oncogene partner 2","termid":"PBO:0047577"}


id: GO:0075284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a multicellular or syncytial spore via septations derived from mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"},{"relation_name":"is_a","term_name":"sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asexual sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075284"}


id: PBO:0089684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop23","termid":"PBO:0089684"}


id: PBO:0030224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology_during_vegetative_growth","termid":"PBO:0030224"}


id: PBO:0085044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential INO80 chromatin remodeling complex subunit; preferentially binds DNA ends, protecting them from exonucleatic cleavage; deletion affects telomere maintenance via recombination; related to mammalian high mobility group proteins","termid":"PBO:0085044"}


id: GO:1903312
data:
  {"annotated_genes":["SJAG_03883","SJAG_00797","SJAG_04825","SJAG_04946","SJAG_02370","SJAG_03696","SJAG_02573","SJAG_03283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117438,99279,78068,89399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[88692,95448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[88693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[88993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[90869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA metabolic process.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"negatively_regulates","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02370":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"negative regulation of mRNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mRNA metabolic process","type":"exact"},{"name":"down regulation of mRNA metabolism","type":"exact"},{"name":"down-regulation of mRNA metabolic process","type":"exact"},{"name":"down-regulation of mRNA metabolism","type":"exact"},{"name":"downregulation of mRNA metabolic process","type":"exact"},{"name":"downregulation of mRNA metabolism","type":"exact"},{"name":"inhibition of mRNA metabolic process","type":"narrow"},{"name":"inhibition of mRNA metabolism","type":"narrow"},{"name":"negative regulation of mRNA metabolism","type":"exact"}],"termid":"GO:1903312","terms_by_termid":{"GO:0048255":null,"GO:0060212":null,"GO:0070935":null,"GO:0120271":null,"GO:1902373":null}}


