# terms

id: PBO:0029579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_reactive_oxygen_species_level","termid":"PBO:0029579"}


id: PBO:0054645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2050","termid":"PBO:0054645"}


id: PR:O42883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.06 gene.","definition_xrefs":["UniProtKB:O42883","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.06","synonyms":[{"name":"Spom972h-SPAC8E11.06","type":"exact"}],"termid":"PR:O42883"}


id: PBO:0086357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative 2-methylcitrate dehydratase; mitochondrial protein that participates in respiration; induced by diauxic shift; homologous to E. coli PrpD, may take part in the conversion of 2-methylcitrate to 2-methylisocitrate","termid":"PBO:0086357"}


id: PBO:0069314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 572, pseudogene","termid":"PBO:0069314"}


id: MOD:02011
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a oleoylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"oleoylated residue","termid":"MOD:02012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-oleoylated residue","termid":"MOD:02011"}


id: PBO:0027906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_nucleus_and_mitotic_cell_cycle_arrest_in_interphase","termid":"PBO:0027906"}


id: PBO:0051540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL6 antisense RNA 1","termid":"PBO:0051540"}


id: MONDO:0014194
data:
  {"annotated_genes":["SJAG_02646"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85161],"is_not":false,"summary":null,"term":"MONDO:0014194"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the CYC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809553","GARD:15970","OMIM:615453","DOID:0080115","MEDGEN:815883"],"synonyms":[{"name":"CYC1 mitochondrial complex III deficiency","type":"exact"},{"name":"MC3DN6","type":"related"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 6","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in CYC1","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 6","type":"related"}],"termid":"MONDO:0014194","terms_by_termid":{"MONDO:0014194":null},"xrefs":{"Monarch":{"xref_id":"0014194"}}}


id: PBO:0081375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF213 antisense RNA 1 (head to head)","termid":"PBO:0081375"}


id: MOD:01215
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to O4-(carboxamidomethyl)aspartate.","definition_xrefs":["PubMed:11510821","PubMed:12422359","PubMed:16526082","Unimod:4#D","OMSSA:29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized aspartic acid","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"carbamidomethyld","type":"exact"}],"termid":"MOD:01215"}


id: MONDO:0020077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clonal myeloid disorders that possess both dysplastic and proliferative features but are not properly classified as either MYELODYSPLASTIC SYNDROMES or MYELOPROLIFERATIVE disorderS.","definition_xrefs":["MESH:D054437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid hemopathy","termid":"MONDO:0015756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic/myeloproliferative disease","secondary_identifiers":["Orphanet:98275","GARD:9351"],"termid":"MONDO:0020077","xrefs":{"Monarch":{"xref_id":"0020077"}}}


id: PBO:0084717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane magnesium transporter; involved in maintenance of mitochondrial magnesium concentrations and membrane potential; indirectly affects splicing of group II introns; functionally and structurally related to Mrs2p","termid":"PBO:0084717"}


id: PBO:0054448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1845","termid":"PBO:0054448"}


id: MONDO:0017964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XX disorder of sex development induced by exogenous maternal-derived androgen (obsolete MONDO:0017964)","secondary_identifiers":["Orphanet:325099"],"synonyms":[{"name":"46,XX DSD induced by exogenous maternal-derived androgen","type":"exact"}],"termid":"MONDO:0017964","xrefs":{"Monarch":{"xref_id":"0017964"}}}


id: GO:0004142
data:
  {"annotated_genes":["SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92258],"is_not":false,"summary":null,"term":"GO:0004142"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine.","definition_xrefs":["EC:2.7.8.2","RHEA:32939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016780","GO:0003824"],"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482961","Reactome:R-HSA-1482973","MetaCyc:RXN-5781"],"synonyms":[{"name":"1-alkyl-2-acetyl-m-glycerol:CDPcholine choline phosphotransferase activity","type":"related"},{"name":"1-alkyl-2-acetyl-sn-glycerol cholinephosphotransferase activity","type":"related"},{"name":"1-alkyl-2-acetylglycerol cholinephosphotransferase activity","type":"related"},{"name":"CDP-choline diglyceride phosphotransferase activity","type":"related"},{"name":"CDP-choline:1,2-diacylglycerol cholinephosphotransferase activity","type":"related"},{"name":"CPT","type":"related"},{"name":"alkylacylglycerol choline phosphotransferase activity","type":"related"},{"name":"alkylacylglycerol cholinephosphotransferase activity","type":"related"},{"name":"cholinephosphotransferase activity","type":"related"},{"name":"cytidine diphosphocholine glyceride transferase activity","type":"related"},{"name":"cytidine diphosphorylcholine diglyceride transferase activity","type":"related"},{"name":"diacylglycerol choline phosphotransferase activity","type":"related"},{"name":"phosphocholine diacylglyceroltransferase activity","type":"related"},{"name":"phosphorylcholine--glyceride transferase activity","type":"related"},{"name":"sn-1,2-diacylglycerol cholinephosphotransferase activity","type":"related"}],"termid":"GO:0004142","terms_by_termid":{"GO:0004142":null}}


id: GO:0097130
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D3 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D3-CDK4 complex","termid":"GO:0097130"}


id: PBO:0048400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 6","termid":"PBO:0048400"}


id: PBO:0079157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 16","termid":"PBO:0079157"}


id: MONDO:0017433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with combined reduction defects of upper and lower limbs (obsolete MONDO:0017433)","secondary_identifiers":["Orphanet:294957","icd11.foundation:1211657447"],"termid":"MONDO:0017433","xrefs":{"Monarch":{"xref_id":"0017433"}}}


id: PBO:0042565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN1A antisense RNA 1","termid":"PBO:0042565"}


id: PATO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001214 temparature_unit (obsolete PATO:0001214)","termid":"PATO:0001214"}


id: PBO:0085056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; null mutation results in a decrease in plasma membrane electron transport","termid":"PBO:0085056"}


id: MONDO:0032771
data:
  {"annotated_genes":["SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86392],"is_not":false,"summary":null,"term":"MONDO:0032771"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03163":null},"genotype_count":0,"is_obsolete":false,"name":"paragangliomas 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16356","UMLS:C5193116","MEDGEN:1673088","OMIM:618475"],"synonyms":[{"name":"PARAGANGLIOMAS 7","type":"related"},{"name":"PGL7","type":"related"}],"termid":"MONDO:0032771","terms_by_termid":{"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0032771"}}}


id: PBO:0040800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BHLHE22 antisense RNA 1","termid":"PBO:0040800"}


id: MONDO:0013060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurodegenerative disease usually presenting before the age of 30 and which is characterized by dystonia, L-dopa-responsive parkinsonism, pyramidal signs and rapid cognitive decline.","definition_xrefs":["Orphanet:199351"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete persistent combined dystonia (obsolete MONDO:0018329)","termid":"MONDO:0018329"},{"relation_name":"is_a","term_name":"late-onset Parkinson disease","termid":"MONDO:0008199"},{"relation_name":"is_a","term_name":"PLA2G6-associated neurodegeneration","termid":"MONDO:0017998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive Parkinson disease 14","secondary_identifiers":["OMIM:612953","SCTID:720466001","UMLS:C2751842","MEDGEN:414488","GARD:12568","MESH:C567844","DOID:0060900"],"synonyms":[{"name":"PARK14","type":"exact"},{"name":"PLA2G6 hereditary late onset Parkinson disease","type":"exact"},{"name":"PLA2G6-related dystonia-parkinsonism","type":"exact"},{"name":"Parkinson disease 14, autosomal recessive","type":"related"},{"name":"adult-onset dystonia - parkinsonism","type":"related"},{"name":"autosomal recessive Parkinson disease type 14","type":"exact"},{"name":"autosomal recessive Parkinson's disease 14","type":"related"},{"name":"dystonia-Parkinsonism Adult-onset","type":"exact"},{"name":"dystonia-Parkinsonism, adult-onset","type":"related"},{"name":"dystonia-parkinsonism, Paisan-Ruiz type","type":"exact"},{"name":"hereditary late onset Parkinson disease caused by mutation in PLA2G6","type":"exact"}],"termid":"MONDO:0013060","xrefs":{"Monarch":{"xref_id":"0013060"}}}


id: MONDO:0018169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Morning glory syndrome (MGS) is an optic neuropathy characterized by a congenital funnel shaped excavation of the posterior fundus that incorporates the optic disk malformation (resembling the morning glory flower) MGS is usually unilateral and may result in a decrease in best-corrected visual acuity (BCVA). MGS either occurs isolated or associated to other ocular or non-ocular anomalies.","definition_xrefs":["Orphanet:35737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma of optic nerve","termid":"MONDO:0007354"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"morning glory syndrome","secondary_identifiers":["MedDRA:10027974","GARD:13354","UMLS:C3554721","MEDGEN:767635"],"synonyms":[{"name":"Ectasic coloboma","type":"exact"},{"name":"Volubilis syndrome","type":"exact"}],"termid":"MONDO:0018169","xrefs":{"Monarch":{"xref_id":"0018169"}}}


id: MONDO:0800480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder characterized by core deficits in visual-spatial processing and a significant discrepancy between verbal and nonverbal intelligence (where verbal intelligence is higher).","direct_ancestors":[{"relation_name":"is_a","term_name":"specific learning disability","termid":"MONDO:0016225"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-verbal learning disability","secondary_identifiers":["MEDGEN:752350","UMLS:C2732653"],"synonyms":[{"name":"non-verbal learning disorder","type":"exact"}],"termid":"MONDO:0800480","xrefs":{"Monarch":{"xref_id":"0800480"}}}


id: GO:0048529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: magnesium protoporphyrin IX 13-monomethyl ester + 3 NADPH + 3 H+ + 3 O2 = divinylprotochlorophyllide + 3 NADP+ + 5 H2O.","definition_xrefs":["RHEA:33235","EC:1.14.13.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity","synonyms":[{"name":"Mg-protoporphyrin IX monomethyl ester (oxidative) cyclase activity","type":"related"},{"name":"Mg-protoporphyrin IX monomethyl ester oxidative cyclase activity","type":"related"},{"name":"magnesium-protoporphyrin-IX 13-monomethyl ester,NADPH:oxygen oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0048529"}


id: MONDO:0011561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 10q24.","definition_xrefs":["PMID:16385451","DOID:0110038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Alzheimer disease 6","secondary_identifiers":["OMIM:605526","MEDGEN:381362","UMLS:C1854187","GARD:16509","MESH:C565325"],"synonyms":[{"name":"AD6","type":"exact"},{"name":"Alzheimer disease 6","type":"exact"},{"name":"Alzheimer disease 6, late onset","type":"exact"},{"name":"Alzheimer disease 6, late-onset","type":"related"},{"name":"Alzheimer disease type 6","type":"exact"},{"name":"Alzheimer's disease 6","type":"exact"},{"name":"Alzheimer's disease type 6","type":"exact"},{"name":"plasma Beta-amyloid-42 level quantitative trait locus","type":"related"}],"termid":"MONDO:0011561","xrefs":{"Monarch":{"xref_id":"0011561"}}}


id: PBO:0046686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit alpha","termid":"PBO:0046686"}


id: PBO:0049691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid oxidase 1","termid":"PBO:0049691"}


id: PBO:0083614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynamin-related GTPase involved in mitochondrial organization; required for mitochondrial fission and inheritance; self assembles on the cytoplasmic face of mitochondrial tubules at sites where division will occur; participates in endocytosis and regulates peroxisome fission along with Vps1p; mutants in the human ortholog DNM1L, which mediates mitochondrial fission, peroxisomal division, autophagy, and mitophagy, are associated with slowly progressive infantile encephalopathy","termid":"PBO:0083614"}


id: PBO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 4","termid":"PBO:0046602"}


id: PBO:0078326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta variable 1","termid":"PBO:0078326"}


id: FYPO:0003465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is lower than normal during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased alpha,alpha-trehalase activity during cellular response to salt stress","synonyms":[{"name":"decreased neutral trehalase activity during cellular response to salt stress","type":"exact"},{"name":"decreased trehalase activity during cellular response to salt stress","type":"broad"},{"name":"reduced alpha,alpha-trehalase activity during cellular response to v","type":"exact"}],"termid":"FYPO:0003465"}


id: PBO:0066258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 1","termid":"PBO:0066258"}


id: PR:A9ZLL8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsd90 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A9ZLL8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein lsd90 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.16c","synonyms":[{"name":"90kDa large and small daughter protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsd90","type":"exact"}],"termid":"PR:A9ZLL8"}


id: PBO:0080267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 30 pseudogene","termid":"PBO:0080267"}


id: PBO:0038593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 11","termid":"PBO:0038593"}


id: PBO:0027333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_menadione","termid":"PBO:0027333"}


id: MONDO:0020627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epileptic encephalopathy, infantile or early childhood","secondary_identifiers":["OMIMPS:617711"],"termid":"MONDO:0020627","xrefs":{"Monarch":{"xref_id":"0020627"}}}


id: GO:0004496
data:
  {"annotated_genes":["SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87912],"is_not":false,"summary":null,"term":"GO:0004496"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mevalonate + ATP = (R)-5-phosphomevalonate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.36","RHEA:17065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"mevalonate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191380","KEGG_REACTION:R02245","MetaCyc:MEVALONATE-KINASE-RXN"],"synonyms":[{"name":"ATP:(R)-mevalonate 5-phosphotransferase activity","type":"related"},{"name":"ATP:mevalonate 5-phosphotransferase activity","type":"related"},{"name":"MVA kinase activity","type":"related"},{"name":"mevalonate 5-phosphotransferase activity","type":"related"},{"name":"mevalonate kinase (phosphorylating)","type":"related"},{"name":"mevalonate phosphokinase activity","type":"related"},{"name":"mevalonic acid kinase activity","type":"related"},{"name":"mevalonic kinase activity","type":"related"}],"termid":"GO:0004496","terms_by_termid":{"GO:0004496":null}}


id: GO:0007054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the spindle during meiosis I of a meiotic cell cycle in males. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in male meiosis","termid":"GO:0007053"},{"relation_name":"part_of","term_name":"male meiosis I","termid":"GO:0007141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0044085","GO:0007049","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"spindle assembly involved in male meiosis I","synonyms":[{"name":"male meiosis I spindle assembly","type":"related"}],"termid":"GO:0007054"}


id: MONDO:0002847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from skeletal muscle.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle neoplasm","termid":"MONDO:0002848"},{"relation_name":"is_a","term_name":"muscle cancer","termid":"MONDO:0005864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"skeletal muscle cancer","secondary_identifiers":["UMLS:C1334619","DOID:4043","MEDGEN:233669","NCIT:C6516"],"synonyms":[{"name":"cancer of skeletal muscle tissue","type":"exact"},{"name":"malignant neoplasm of skeletal muscle","type":"exact"},{"name":"malignant neoplasm of skeletal muscle tissue","type":"exact"},{"name":"malignant neoplasm of the skeletal muscle","type":"exact"},{"name":"malignant skeletal muscle neoplasm","type":"exact"},{"name":"malignant skeletal muscle tissue neoplasm","type":"exact"},{"name":"malignant skeletal muscle tumor","type":"exact"},{"name":"malignant skeletal muscle tumour","type":"exact"},{"name":"malignant tumor of skeletal muscle","type":"exact"},{"name":"malignant tumor of the skeletal muscle","type":"exact"},{"name":"malignant tumour of skeletal muscle","type":"exact"},{"name":"malignant tumour of the skeletal muscle","type":"exact"},{"name":"skeletal muscle tissue cancer","type":"exact"}],"termid":"MONDO:0002847","xrefs":{"Monarch":{"xref_id":"0002847"}}}


id: PBO:0082261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amino acid transporter for valine, leucine, isoleucine, and tyrosine; low-affinity tryptophan and histidine transporter; overexpression confers FK506 and FTY720 resistance; protein abundance increases in response to DNA replication stress","termid":"PBO:0082261"}


id: MONDO:0015679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal thrombocytopenia with normal platelets (obsolete MONDO:0015679)","secondary_identifiers":["Orphanet:168629"],"termid":"MONDO:0015679","xrefs":{"Monarch":{"xref_id":"0015679"}}}


id: SO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TGACTCA, bound by AP-1 and related transcription factors.","definition_xrefs":["PMID:3125983","PMID:1899230","PMID:3034432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP_1_binding_site","synonyms":[{"name":"AP-1 binding site","type":"exact"}],"termid":"SO:0001842"}


id: MONDO:0008501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sturge-Weber syndrome (SWS) is a rare congenital neurocutaneous disorder characterized by facial capillary malformations and/or cerebral and ocular ipsilateral vascular malformations that result in variable degrees of ocular and neurological anomalies.","definition_xrefs":["Orphanet:3205"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neurovascular malformation (obsolete MONDO:0015145)","termid":"MONDO:0015145"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic developmental defect of the eye (obsolete MONDO:0015218)","termid":"MONDO:0015218"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neurocutaneous syndrome with epilepsy (obsolete MONDO:0015651)","termid":"MONDO:0015651"},{"relation_name":"excluded_subClassOf","term_name":"obsolete obsolete rare capillary malformation with associated anomalies (obsolete MONDO:0018719)","termid":"MONDO:0018719"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Sturge-Weber syndrome","secondary_identifiers":["DOID:0111563","NCIT:C3391","OMIM:185300","NANDO:2200830","NANDO:1200606","GARD:7706","MEDGEN:21361","SCTID:19886006","icd11.foundation:1173035836","MedDRA:10042265","MESH:D013341","UMLS:C0038505","NORD:1741","MedDRA:10057653","ICD9:759.6"],"synonyms":[{"name":"SWS","type":"exact"},{"name":"SWS type I - Facial and leptomeningeal angiomas","type":"related"},{"name":"SWS type II - Facial angioma alone, no CNS involvement","type":"related"},{"name":"SWS type III - isolated leptomeningeal angiomas","type":"related"},{"name":"Sturge Weber Syndrome","type":"exact"},{"name":"Sturge Weber syndrome","type":"exact"},{"name":"Sturge-Weber disease","type":"exact"},{"name":"Sturge-Weber syndrome","type":"exact"},{"name":"Sturge-Weber syndrome, somatic, mosaic","type":"exact"},{"name":"Sturge-Weber-Dimitri syndrome","type":"exact"},{"name":"Sturge-Weber-Krabbe angiomatosis","type":"exact"},{"name":"Sturge-Weber-Krabbe syndrome","type":"exact"},{"name":"encephalofacial angiomatosis","type":"exact"},{"name":"encephalotrigeminal angiomatosis","type":"exact"},{"name":"encephalotrigeminal syndrome","type":"exact"},{"name":"fourth phacomatosis","type":"related"},{"name":"leptomeningeal angiomatosis","type":"related"},{"name":"meningeal capillary angiomatosis","type":"related"}],"termid":"MONDO:0008501","xrefs":{"Monarch":{"xref_id":"0008501"}}}


id: PBO:0040809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD1 antisense RNA 1","termid":"PBO:0040809"}


id: PBO:0049654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 8","termid":"PBO:0049654"}


id: MONDO:0015736
data:
  {"annotated_genes":["SJAG_03379","SJAG_03145","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[84388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"},{"annotations":[85948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"}]},"cv_name":"mondo","definition":"Intermediate nemaline myopathy is a type of nemaline myopathy (NM) that shows features of typical NM in neonates with a more severe progression.","definition_xrefs":["Orphanet:171433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of nebulin","termid":"MONDO:0016194"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03145":null,"SJAG_03379":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"intermediate nemaline myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1667070006","GARD:12823","MEDGEN:1803914","UMLS:C5680452"],"synonyms":[{"name":"Intermediate congenital NM","type":"related"},{"name":"Intermediate congenital nemaline myopathy","type":"related"}],"termid":"MONDO:0015736","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0012239":null},"xrefs":{"Monarch":{"xref_id":"0015736"}}}


id: FYECO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing mannitol as the carbon source, yeast extract and other components. The concentration of mannitol is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannitol YE","synonyms":[{"name":"mannitol rich medium","type":"broad"}],"termid":"FYECO:0000433"}


id: GO:1901206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901206)","synonyms":[{"name":"activation of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"activation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"upregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901206"}


id: GO:0034969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by addition of a methyl group to an arginine residue.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone arginine methylation (obsolete GO:0034969)","termid":"GO:0034969"}


id: PBO:0046099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 2","termid":"PBO:0046099"}


id: GO:1900062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of replicative cell aging.","definition_xrefs":["PMID:17914901","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of replicative cell aging (obsolete GO:1900062)","synonyms":[{"name":"regulation of replicative cell ageing","type":"exact"}],"termid":"GO:1900062"}


id: PBO:0068266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 2C, pseudogene","termid":"PBO:0068266"}


id: PBO:0080195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 3","termid":"PBO:0080195"}


id: MONDO:0019784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"12q14 microdeletion syndrome is characterized by mild intellectual deficit, failure to thrive, short stature and osteopoikilosis. It has been described in four unrelated patients. The syndrome appears to be caused by a heterozygous deletion at chromosome region 12q14, which was detected in three of the four patients. The deleted region contains the LEMD3 gene: mutations in this gene have already been implicated in osteopoikilosis.","definition_xrefs":["Orphanet:94063"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 12","termid":"MONDO:0016877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"12q14 microdeletion syndrome","secondary_identifiers":["DECIPHER:76","GARD:13390","SCTID:719046005","UMLS:C4305140","MEDGEN:930809"],"synonyms":[{"name":"Del(12)(q14)","type":"exact"},{"name":"deletion 12q14","type":"exact"},{"name":"monosomy 12q14","type":"exact"},{"name":"osteopoikilosis-short stature-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0019784","xrefs":{"Monarch":{"xref_id":"0019784"}}}


id: PBO:0043463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 4","termid":"PBO:0043463"}


id: MONDO:0001608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a vagus nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vagus nerve disorder","termid":"MONDO:0001535"},{"relation_name":"is_a","term_name":"glossopharyngeal nerve neoplasm","termid":"MONDO:0002638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vagus nerve neoplasm","secondary_identifiers":["DOID:12984","MEDGEN:224735","UMLS:C1263901","NCIT:C5831","SCTID:126976007","ICD9:239.7"],"synonyms":[{"name":"Vagus nerve neoplasm","type":"exact"},{"name":"Vagus nerve neoplasms","type":"exact"},{"name":"Vagus nerve tumor","type":"exact"},{"name":"Vagus nerve tumors","type":"exact"},{"name":"Vagus nerve tumour","type":"exact"},{"name":"Vagus nerve tumours","type":"exact"},{"name":"Xth cranial nerve neoplasms","type":"exact"},{"name":"Xth cranial nerve tumors","type":"exact"},{"name":"Xth cranial nerve tumours","type":"exact"},{"name":"neoplasm of Vagus nerve","type":"exact"},{"name":"neoplasm of tenth cranial nerve","type":"exact"},{"name":"neoplasm of the Vagus nerve","type":"exact"},{"name":"neoplasm of the tenth cranial nerve","type":"exact"},{"name":"neoplasm of vagus nerve","type":"exact"},{"name":"tenth cranial nerve neoplasm","type":"exact"},{"name":"tenth cranial nerve neoplasms","type":"exact"},{"name":"tenth cranial nerve tumor","type":"exact"},{"name":"tenth cranial nerve tumors","type":"exact"},{"name":"tenth cranial nerve tumour","type":"exact"},{"name":"tenth cranial nerve tumours","type":"exact"},{"name":"tumor of Vagus nerve","type":"exact"},{"name":"tumor of tenth cranial nerve","type":"exact"},{"name":"tumor of the Vagus nerve","type":"exact"},{"name":"tumor of the tenth cranial nerve","type":"exact"},{"name":"tumor of vagus nerve","type":"exact"},{"name":"tumour of Vagus nerve","type":"exact"},{"name":"tumour of tenth cranial nerve","type":"exact"},{"name":"tumour of the Vagus nerve","type":"exact"},{"name":"tumour of the tenth cranial nerve","type":"exact"},{"name":"tumour of vagus nerve","type":"exact"},{"name":"vagus nerve neoplasm (disease)","type":"exact"},{"name":"vagus nerve tumor","type":"exact"},{"name":"vagus nerve tumour","type":"exact"}],"termid":"MONDO:0001608","xrefs":{"Monarch":{"xref_id":"0001608"}}}


id: PATO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and mid-line surface of an organism relative to another entity.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posteromedial to","termid":"PATO:0002449"}


id: PBO:0064382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 4","termid":"PBO:0064382"}


id: PBO:0031357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caffeine","termid":"PBO:0031357"}


id: PBO:0065837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 2","termid":"PBO:0065837"}


id: MONDO:0002973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma characterized by the presence of malignant large epithelioid melanocytes.","definition_xrefs":["NCIT:C4236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid cell melanoma","secondary_identifiers":["UMLS:C0334443","ICDO:8771/3","DOID:4360","MEDGEN:137763"],"synonyms":[{"name":"epithelioid cell malignant melanoma","type":"exact"},{"name":"epithelioid cell melanoma","type":"exact"},{"name":"epithelioid cell melanoma (morphologic abnormality)","type":"exact"},{"name":"epithelioid melanoma","type":"exact"}],"termid":"MONDO:0002973","xrefs":{"Monarch":{"xref_id":"0002973"}}}


id: GO:1901657
data:
  {"annotated_genes":["SJAG_00044","SJAG_04693","SJAG_00957","SJAG_00885","SJAG_06634","SJAG_00694","SJAG_04265","SJAG_04735","SJAG_01070","SJAG_04264","SJAG_05334","SJAG_03881","SJAG_02959","SJAG_01673","SJAG_02179","SJAG_04927","SJAG_02582","SJAG_03096","SJAG_05029","SJAG_01781","SJAG_02580","SJAG_01859","SJAG_00134","SJAG_01261","SJAG_03213","SJAG_01359","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[86799,86800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[112835,112834,89754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[115972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[107530,88402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[107654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[107655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[112224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[107656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[97785,97786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[111311,90280,89862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[106421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042278"},{"annotations":[92952,92734,88983,114973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[89863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[106423,104657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006213"},{"annotations":[96930,112947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[111055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[105094,112951,97263,93900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosyl compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01261":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04265":null,"SJAG_04693":null,"SJAG_04735":null,"SJAG_04927":null,"SJAG_05029":null,"SJAG_05334":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycosyl compound metabolism","type":"exact"}],"termid":"GO:1901657","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0006213":null,"GO:0009972":null,"GO:0031591":null,"GO:0042278":null,"GO:0043097":null,"GO:0043174":null,"GO:0046085":null,"GO:0046086":null,"GO:0046132":null,"GO:0046135":null,"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: MONDO:0007669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal cysts and diabetes syndrome (RCAD) is a rare form of maturity-onset diabetes of the young (MODY) characterized clinically by heterogeneous cystic renal disease and early-onset familial non-autoimmune diabetes. Pancreatic atrophy, liver dysfunction and genital tract anomalies are also features of the syndrome.","definition_xrefs":["Orphanet:93111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0037792","MONDO:0005015","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"renal cysts and diabetes syndrome","secondary_identifiers":["OMIM:137920","DECIPHER:47","DOID:0111101","MESH:C535520","UMLS:C0431693","NANDO:2201073","NCIT:C123018","SCTID:446641003","GARD:10221","MEDGEN:96569"],"synonyms":[{"name":"CAKUT with diabetes","type":"exact"},{"name":"FJHN atypical","type":"related"},{"name":"FJHN, atypical","type":"related"},{"name":"HNF1B-MODY","type":"exact"},{"name":"HNF1B-related renal cysts and diabetes syndrome","type":"exact"},{"name":"MODY type 5","type":"related"},{"name":"MODY5","type":"exact"},{"name":"RCAD","type":"exact"},{"name":"RCAD syndrome","type":"exact"},{"name":"atypical FJHN","type":"exact"},{"name":"atypical familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"congenital anomalies of the kidney and urinary tract with diabetes","type":"exact"},{"name":"familial hypoplastic glomerulocystic kidney","type":"exact"},{"name":"glomerulocystic kidney disease, hypoplastic type","type":"related"},{"name":"glomerulocystic kidney, familial hypoplastic","type":"related"},{"name":"hepatocyte nuclear Factor 1-beta-associated monogenic diabetes","type":"exact"},{"name":"hyperuricemic nephropathy, familial juvenile, atypical","type":"related"},{"name":"hypoplastic type glomerulocystic kidney disease","type":"exact"},{"name":"maturity onset diabetes of the Young, type 5","type":"exact"},{"name":"maturity-onset diabetes of the Young, type 5","type":"related"},{"name":"maturity-onset diabetes of the young type 5","type":"related"},{"name":"renal cysts and diabetes syndrome","type":"exact"},{"name":"renal cysts-maturity-onset diabetes of the young syndrome","type":"exact"},{"name":"renal dysfunction-early-onset diabetes syndrome","type":"exact"}],"termid":"MONDO:0007669","xrefs":{"Monarch":{"xref_id":"0007669"}}}


id: PBO:0082406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of translation initiation factor eIF2B; the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as negative regulator of GCN4 expression; mutations in human ortholog EIF2B2 cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); human ortholog can complement yeast mutant, allows growth down-regulation of yeast gene","termid":"PBO:0082406"}


id: PBO:0030608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_calcium_level","termid":"PBO:0030608"}


id: GO:0035640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism in response to a novel environment or stimulus.","definition_xrefs":["GOC:BHF","GOC:pr","PMID:11682103","PMID:9767169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exploration behavior","synonyms":[{"name":"exploration behaviour","type":"exact"},{"name":"exploratory behavior","type":"exact"},{"name":"exploratory behaviour","type":"exact"},{"name":"open-field behavior","type":"narrow"}],"termid":"GO:0035640"}


id: GO:0034728
data:
  {"annotated_genes":["SJAG_04272","SJAG_04670","SJAG_02198","SJAG_04038","SJAG_03128","SJAG_01653","SJAG_02906","SJAG_02416","SJAG_02314","SJAG_04257","SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91580,96281,110413,112426,112737],"is_not":false,"summary":null,"term":"GO:0034728"},{"annotations":[106890,94267,95641,113677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006334"},{"annotations":[89274,116037,96280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"is_a","term_name":"protein-DNA complex organization","termid":"GO:0071824"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03982":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04670":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"nucleosome organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleosome organisation","type":"exact"}],"termid":"GO:0034728","terms_by_termid":{"GO:0006334":null,"GO:0006337":null,"GO:0034728":null}}


id: GO:0009074
data:
  {"annotated_genes":["SJAG_02734","SJAG_03312","SJAG_04842","SJAG_03743","SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97545],"is_not":false,"summary":null,"term":"GO:0009074"},{"annotations":[87715,96456,96457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[105937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006572"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00493":null,"SJAG_02734":null,"SJAG_03312":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aromatic amino acid family breakdown","type":"exact"},{"name":"aromatic amino acid family catabolism","type":"exact"},{"name":"aromatic amino acid family degradation","type":"exact"}],"termid":"GO:0009074","terms_by_termid":{"GO:0000949":null,"GO:0006572":null,"GO:0009074":null}}


id: MONDO:0022518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by rapidly progressive sensorineural hearing loss (SNHL), that is often bilateral, and is potentially reversible.","definition_xrefs":["PMID:26485595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune inner ear disease","secondary_identifiers":["MEDGEN:583162","icd11.foundation:1392879169","UMLS:C0395947"],"synonyms":[{"name":"AIED","type":"related"}],"termid":"MONDO:0022518","xrefs":{"Monarch":{"xref_id":"0022518"}}}


id: PBO:0067135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 183, pseudogene","termid":"PBO:0067135"}


id: GO:0080101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidyl-N-dimethylethanolamine = S-adenosyl-L-homocysteine + phosphatidylcholine.","definition_xrefs":["PMID:19366698"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidyl-N-dimethylethanolamine N-methyltransferase activity (obsolete GO:0080101)","termid":"GO:0080101"}


id: PBO:0001078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase (predicted)","termid":"PBO:0001078"}


id: FYPO:0002690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cumene hydroperoxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on cumene hydroperoxide","synonyms":[{"name":"normal cell population growth in presence of cumene hydroperoxide","type":"exact"},{"name":"normal cell population growth on cumene hydroperoxide","type":"exact"},{"name":"normal cellular response to cumene hydroperoxide","type":"related"},{"name":"normal vegetative cell population growth on cumene hydroperoxide","type":"exact"}],"termid":"FYPO:0002690"}


id: PBO:0079218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 3","termid":"PBO:0079218"}


id: MONDO:0002979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated squamous cell carcinoma characterized by a papillary, exophytic growth pattern and hyperkeratosis. The most commonly affected anatomic sites are the larynx, penis, cervix, vagina, and vulva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"papillary carcinoma","termid":"MONDO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary squamous carcinoma","secondary_identifiers":["NCIT:C4102","DOID:4385","ICDO:8052/3","UMLS:C0334244","MEDGEN:83115"],"synonyms":[{"name":"papillary epidermoid carcinoma","type":"exact"},{"name":"papillary epidermoid cell carcinoma","type":"exact"},{"name":"papillary squamous carcinoma","type":"exact"},{"name":"papillary squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002979","xrefs":{"Monarch":{"xref_id":"0002979"}}}


id: PBO:0055396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2826","termid":"PBO:0055396"}


id: GO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor internalization.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"positively_regulates","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of receptor internalization","synonyms":[{"name":"activation of receptor internalization","type":"narrow"},{"name":"stimulation of receptor internalization","type":"narrow"},{"name":"up regulation of receptor internalization","type":"exact"},{"name":"up-regulation of receptor internalization","type":"exact"},{"name":"upregulation of receptor internalization","type":"exact"}],"termid":"GO:0002092"}


id: PBO:0050845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1","termid":"PBO:0050845"}


id: PBO:0066651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor like","termid":"PBO:0066651"}


id: GO:0019447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["PMID:11527960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-cysteine metabolic process","termid":"GO:0046438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"D-cysteine catabolic process","synonyms":[{"name":"D-cysteine breakdown","type":"exact"},{"name":"D-cysteine catabolism","type":"exact"},{"name":"D-cysteine degradation","type":"exact"}],"termid":"GO:0019447"}


id: PBO:0062412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 39 pseudogene","termid":"PBO:0062412"}


id: GO:0009544
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The protein complex that catalyzes the phosphorylation of ADP to ATP in chloroplasts.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast ATP synthase complex (obsolete GO:0009544)","termid":"GO:0009544"}


id: PBO:0038844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 13","termid":"PBO:0038844"}


id: PBO:0063639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 5, pseudogene","termid":"PBO:0063639"}


id: PBO:0086970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of acetolactate synthase; acetolactate synthase catalyzes the first step of branched-chain amino acid biosynthesis; enhances activity of the Ilv2p catalytic subunit, localizes to mitochondria","termid":"PBO:0086970"}


id: PBO:0057536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 652","termid":"PBO:0057536"}


id: GO:0035019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line.","definition_xrefs":["GOC:bf","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic stem cell population maintenance","termid":"GO:0035019"}


id: PBO:0039910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF9 intronic transcript 1","termid":"PBO:0039910"}


id: MONDO:0014073
data:
  {"annotated_genes":["SJAG_03815","SJAG_02919","SJAG_04567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84373,84374,84375],"is_not":false,"summary":null,"term":"MONDO:0014073"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the CRYAB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15916","MEDGEN:767563","OMIM:615184","UMLS:C3554649","DOID:0110450"],"synonyms":[{"name":"CMD1II","type":"exact"},{"name":"CRYAB familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1II","type":"related"},{"name":"cardiomyopathy, dilated, type 1II","type":"exact"},{"name":"dilated cardiomyopathy type 1II","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in CRYAB","type":"exact"}],"termid":"MONDO:0014073","terms_by_termid":{"MONDO:0014073":null},"xrefs":{"Monarch":{"xref_id":"0014073"}}}


id: GO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of the DSCAM-based immune receptors of insects.","definition_xrefs":["GOC:add","PMID:16261174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of DSCAM-based immune receptors","termid":"GO:0002201"}


id: MONDO:0003906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the ovary and is characterized by the presence of extensive differentiation into hepatic tissue.","definition_xrefs":["NCIT:C39989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian yolk sac tumor","termid":"MONDO:0006344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian yolk sac tumor, hepatoid pattern","secondary_identifiers":["DOID:6512","UMLS:C1518748","MEDGEN:276676"],"synonyms":[{"name":"hepatoid pattern ovarian yolk sac tumor","type":"related"},{"name":"hepatoid pattern ovarian yolk sac tumour","type":"related"},{"name":"ovarian yolk Sac tumor, hepatoid pattern","type":"exact"}],"termid":"MONDO:0003906","xrefs":{"Monarch":{"xref_id":"0003906"}}}


id: MONDO:0700149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that affects dogs. It arises from muscle, fat, fibrous tissue, bone, cartilage, and blood vessels.","definition_xrefs":["NCIT:C128195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine sarcoma","termid":"MONDO:0700149","xrefs":{"Monarch":{"xref_id":"0700149"}}}


id: PBO:0081734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 665","termid":"PBO:0081734"}


id: PBO:0073242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 7","termid":"PBO:0073242"}


id: MONDO:0019624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired angioedema (AAE) is characterized by the occurrence of transitory and recurrent subcutaneous and/or submucosal edemas resulting in swelling and/or abdominal pain due to an acquired C1 inhibitor (C1-INH) deficiency.","definition_xrefs":["Orphanet:91385"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-histaminic angioedema","termid":"MONDO:0019013"},{"relation_name":"is_a","term_name":"angioedema","termid":"MONDO:0010481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired angioedema","secondary_identifiers":["GARD:8605","icd11.foundation:1078767412","MESH:C538173","DOID:0080941","MEDGEN:419486","UMLS:C2931758"],"synonyms":[{"name":"AAE","type":"exact"},{"name":"acquired C1 inhibitor deficiency","type":"exact"},{"name":"acquired angioedema","type":"exact"},{"name":"acquired angioneurotic edema","type":"exact"},{"name":"acquired angioneurotic oedema","type":"exact"},{"name":"acquired bradykinine-induced angioedema","type":"exact"},{"name":"acquired non histamine-induced angioedema","type":"exact"},{"name":"angioedema, acquired","type":"related"}],"termid":"MONDO:0019624","xrefs":{"Monarch":{"xref_id":"0019624"}}}


id: GO:0070779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:7914198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-aspartate transmembrane transport","termid":"GO:0070777"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"D-aspartate import across plasma membrane","secondary_identifiers":["GO:0140016"],"synonyms":[{"name":"D-aspartate import","type":"broad"},{"name":"D-aspartate import into cell","type":"exact"},{"name":"D-aspartate uptake","type":"exact"}],"termid":"GO:0070779"}


id: GO:0045492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xylan, a polymer containing a beta-1,4-linked D-xylose backbone.","definition_xrefs":["PMID:11931668","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"xylan biosynthetic process","synonyms":[{"name":"xylan anabolism","type":"exact"},{"name":"xylan biosynthesis","type":"exact"},{"name":"xylan formation","type":"exact"},{"name":"xylan synthesis","type":"exact"}],"termid":"GO:0045492"}


id: GO:0035361
data:
  {"annotated_genes":["SJAG_03728","SJAG_02837","SJAG_04971","SJAG_04142"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78610,96686,98565,110356],"is_not":false,"summary":null,"term":"GO:0035361"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul8 subfamily and a RING domain protein form the catalytic core. In S. cerevisiae, Mms1p acts as the adaptor protein and substrate specificity is conferred by any of a number of different proteins.","definition_xrefs":["GOC:krc","PMID:20139071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02837":null,"SJAG_03728":null,"SJAG_04142":null,"SJAG_04971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul8-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0035361","terms_by_termid":{"GO:0035361":null}}


id: GO:0051412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.","definition_xrefs":["PMID:15240347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticosterone","synonyms":[{"name":"response to corticosterone stimulus","type":"exact"}],"termid":"GO:0051412"}


id: GO:0044823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the covalent insertion of double-stranded retroviral DNA into host DNA. Proceeds by an endonucleolytic cleavage at each 3'-OH extremity of the viral genome, named 3'-processing, followed by a strand transfer reaction leading to the insertion of the processed viral DNA into the target DNA by a trans-esterification mechanism.","definition_xrefs":["PMID:19091057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrase activity","termid":"GO:0008907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"retroviral integrase activity","termid":"GO:0044823"}


id: GO:0031262
data:
  {"annotated_genes":["SJAG_02814","SJAG_03683","SJAG_04076","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94500,101616,108291,115055],"is_not":false,"summary":null,"term":"GO:0031262"}]},"cv_name":"cellular_component","definition":"An essential outer kinetochore complex involved in the attachment of microtubule ends to the chromosomes during mitosis.","definition_xrefs":["PMID:34810257","PMID:28502666","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_02814":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0000776","GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Ndc80 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nuf2-Ndc80 complex","type":"exact"}],"termid":"GO:0031262","terms_by_termid":{"GO:0031262":null}}


id: MONDO:0011471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 6p21.3.","definition_xrefs":["DOID:0110891","PMID:10577918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 3","secondary_identifiers":["MEDGEN:346785","OMIM:604519","MESH:C565764","UMLS:C1858303"],"synonyms":[{"name":"IBD3","type":"exact"},{"name":"inflammatory bowel disease 3","type":"exact"},{"name":"inflammatory bowel disease type 3","type":"exact"}],"termid":"MONDO:0011471","xrefs":{"Monarch":{"xref_id":"0011471"}}}


id: PBO:0051074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5/OR15-5B (non-functional)","termid":"PBO:0051074"}


id: PBO:0039676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 5 subunit mu 1","termid":"PBO:0039676"}


id: PBO:0060633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicalin","termid":"PBO:0060633"}


id: MONDO:0013125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CLAPO syndrome is a newly described syndrome consisting of capillary malformation of the lower lip (C), lymphatic malformation of the face and neck (L), asymmetry of face and limbs (A) and partial or generalized overgrowth (O).","definition_xrefs":["Orphanet:168984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLAPO syndrome","secondary_identifiers":["MEDGEN:416522","MESH:C567763","SCTID:717765001","UMLS:C2751313","OMIM:613089","GARD:17044","icd11.foundation:415642712"],"synonyms":[{"name":"CLAPO syndrome, somatic","type":"exact"},{"name":"Clapo","type":"related"},{"name":"Lopez-Gutierrez syndrome","type":"related"},{"name":"capillary malformation of the LOWER LIP, lymphatic malformation of face and neck, asymmetry of face and limbs, and partial/generalized overgrowth","type":"related"}],"termid":"MONDO:0013125","xrefs":{"Monarch":{"xref_id":"0013125"}}}


id: PBO:0066767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 65","termid":"PBO:0066767"}


id: PBO:0067075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 106, pseudogene","termid":"PBO:0067075"}


id: PBO:0051956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor type 3","termid":"PBO:0051956"}


id: FYPO:0005956
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation","termid":"FYPO:0004426"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein dephosphorylation during vegetative growth","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"synonyms":[{"name":"abnormal protein dephosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005956","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PBO:0056772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 22, Kin17 lysine","termid":"PBO:0056772"}


id: GO:0003825
data:
  {"annotated_genes":["SJAG_01531","SJAG_00129","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92544,95720,100246],"is_not":false,"summary":null,"term":"GO:0003825"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + D-glucose-6-phosphate = UDP + alpha,alpha-trehalose-6-phosphate.","definition_xrefs":["EC:2.4.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_01427":null,"SJAG_01531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:18889","MetaCyc:TREHALOSE6PSYN-RXN"],"synonyms":[{"name":"UDP-glucose-glucose-phosphate glucosyltransferase activity","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"UDPglucose-glucose-phosphate glucosyltransferase activity","type":"related"},{"name":"UDPglucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"alpha,alpha-trehalose phosphate synthase (UDP-forming)","type":"related"},{"name":"phosphotrehalose-uridine diphosphate transglucosylase activity","type":"related"},{"name":"transglucosylase activity","type":"exact"},{"name":"trehalose 6-phosphate synthase activity","type":"exact"},{"name":"trehalose 6-phosphate synthetase activity","type":"exact"},{"name":"trehalose phosphate synthase activity","type":"related"},{"name":"trehalose phosphate synthetase activity","type":"related"},{"name":"trehalose phosphate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"trehalose-P synthetase activity","type":"related"},{"name":"trehalose-phosphate synthase activity","type":"exact"},{"name":"trehalose-phosphate synthetase activity","type":"exact"},{"name":"trehalosephosphate-UDP glucosyl transferase activity","type":"exact"},{"name":"trehalosephosphate-UDP glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose phosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0003825","terms_by_termid":{"GO:0003825":null}}


id: PBO:0069724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1005, pseudogene","termid":"PBO:0069724"}


id: PR:Q9P6J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenosine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized deaminase C1683.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.02","secondary_identifiers":["UniProtKB:Q9P6J8"],"synonyms":[{"name":"Spom972h-ADA","type":"exact"}],"termid":"PR:Q9P6J8"}


id: MONDO:0009821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized osteosclerosis with periosteal bone formation, characteristic facial dysmorphism, brain abnormalities including intracerebral calcifications, and neonatal lethal course.","definition_xrefs":["Orphanet:1832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal osteosclerotic dysplasia","termid":"MONDO:0019702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"lethal osteosclerotic bone dysplasia","secondary_identifiers":["UMLS:C1850106","MEDGEN:342416","OMIM:259775","icd11.foundation:1306493470","MESH:C564916","OMIM:259660","GARD:282","MESH:C535282"],"synonyms":[{"name":"RAINE syndrome","type":"exact"},{"name":"RNS","type":"related"},{"name":"Raine syndrome","type":"exact"},{"name":"combination of microcephaly, exophthalmos, hypoplastic nose and midface, gum hyperplasia, cleft palate, apparently low-set ears, and osteosclerosis","type":"related"},{"name":"lethal osteosclerotic bone dysplasia","type":"exact"},{"name":"osteomalacia, sclerosing, with cerebral calcification","type":"exact"},{"name":"osteosclerotic bone dysplasia, lethal","type":"exact"}],"termid":"MONDO:0009821","xrefs":{"Monarch":{"xref_id":"0009821"}}}


id: PBO:0085732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the synthesis of GlcNAc-PI; GlcNAc-PI is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; homologous to the human PIG-H protein; GlcNAc-PI stands for N-acetylglucosaminyl phosphatidylinositol","termid":"PBO:0085732"}


id: GO:0004089
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112637],"is_not":false,"summary":null,"term":"GO:0004089"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogencarbonate + H+ = CO2 + H2O.","definition_xrefs":["EC:4.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"carbonate dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1237059","Reactome:R-HSA-1475022","Reactome:R-HSA-1475028","Reactome:R-HSA-1475025","Reactome:R-HSA-1475032","MetaCyc:RXN0-5224","Reactome:R-HSA-1475026","Reactome:R-HSA-1475436","Reactome:R-HSA-1475017","RHEA:10748","Reactome:R-HSA-1237045","Reactome:R-HSA-1237081","Reactome:R-HSA-1237047","Reactome:R-HSA-1475435"],"synonyms":[{"name":"anhydrase activity","type":"related"},{"name":"carbonate anhydrase activity","type":"related"},{"name":"carbonate hydro-lyase (carbon-dioxide-forming)","type":"related"},{"name":"carbonate hydro-lyase activity","type":"related"},{"name":"carbonic acid anhydrase activity","type":"related"},{"name":"carbonic anhydrase A","type":"related"},{"name":"carbonic anhydrase activity","type":"exact"},{"name":"carbonic dehydratase activity","type":"related"},{"name":"carboxyanhydrase activity","type":"related"}],"termid":"GO:0004089","terms_by_termid":{"GO:0004089":null}}


id: MONDO:0004879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choroidal sclerosis","termid":"MONDO:0004885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"senile atrophy of choroid","secondary_identifiers":["DOID:9776","SCTID:38513001","ICD9:363.41","UMLS:C0154891","MEDGEN:509701"],"termid":"MONDO:0004879","xrefs":{"Monarch":{"xref_id":"0004879"}}}


id: FYECO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in YES containing yeast extract and other components, but without glucose. The concentration of glucose is very low (eg around 0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no glucose YES","termid":"FYECO:0000422"}


id: PBO:0052341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 1B","termid":"PBO:0052341"}


id: PBO:0085248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-tRNA hydrolase that releases stalled peptides from ribosomes, component of a Cdc48p-complex; involved in protein quality control; exhibits cytosolic and ER-membrane localization; contributes to ER-associated degradation (ERAD) of specific substrates at a step after their ubiquitination; translocates to mitochondria under oxidative stress and forms a complex with Cdc48p and Npl4p that is required for ubiquitin-mediated mitochondria-associated protein degradation (MAD)","termid":"PBO:0085248"}


id: PBO:0056897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor 2","termid":"PBO:0056897"}


id: GO:0070950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a bacterium, the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"}


id: PBO:0072226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 1","termid":"PBO:0072226"}


id: PBO:0056500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 4","termid":"PBO:0056500"}


id: GO:0019526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentitols, any alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol biosynthetic process","termid":"GO:0019401"},{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pentitol biosynthetic process","synonyms":[{"name":"pentitol anabolism","type":"exact"},{"name":"pentitol biosynthesis","type":"exact"},{"name":"pentitol formation","type":"exact"},{"name":"pentitol synthesis","type":"exact"}],"termid":"GO:0019526"}


id: PBO:0004903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12 (predicted)","termid":"PBO:0004903"}


id: PBO:0028732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylcysteine_sulfoxide_level_during_vegetative_growth","termid":"PBO:0028732"}


id: GO:0009210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate catabolic process","termid":"GO:0009149"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate catabolic process","termid":"GO:0009203"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleoside triphosphate catabolic process","synonyms":[{"name":"pyrimidine ribonucleoside triphosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009210"}


id: PR:O59721
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.10","synonyms":[{"name":"Spom972h-pus4","type":"exact"},{"name":"psi55 synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA pseudouridine(55) synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA pseudouridylate synthase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-uridine isomerase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59721"}


id: GO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The leaf morphogenesis process that results in the shaping of a compound leaf. A compound leaf is a leaf having two or more distinct leaflets that are evident as such from early in development.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaf morphogenesis","termid":"GO:0009965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound leaf morphogenesis","termid":"GO:0060777"}


id: SO:0100002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is involved a contact with another molecule.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"molecular_contact_region","synonyms":[{"name":"molecular contact region","type":"related"}],"termid":"SO:0100002"}


id: MONDO:0100477
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that has its basis in the disruption of methylamine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peptide and amine metabolism","termid":"MONDO:0100473"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of methylamine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100477","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0100477"}}}


id: PBO:0109277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3112","termid":"PBO:0109277"}


id: GO:0021606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the accessory nerve to attain its fully functional state. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","ISBN:0838580343","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"accessory nerve development","termid":"GO:0021565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve maturation","synonyms":[{"name":"CN XI maturation","type":"related"},{"name":"spinal accessory nerve maturation","type":"related"}],"termid":"GO:0021606"}


id: PBO:0086806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YDL218W transcription is regulated by Azf1p and induced by starvation and aerobic conditions; expression also induced in cells treated with the mycotoxin patulin","termid":"PBO:0086806"}


id: GO:0050380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H+ + phosphate.","definition_xrefs":["RHEA:28094","PMID:18411271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"undecaprenyl-diphosphatase activity","secondary_identifiers":["KEGG_REACTION:R05627","MetaCyc:UNDECAPRENYL-DIPHOSPHATASE-RXN","EC:3.6.1.27"],"synonyms":[{"name":"C(55)-isoprenyl diphosphatase activity","type":"related"},{"name":"C(55)-isoprenyl pyrophosphatase activity","type":"related"},{"name":"C55-isoprenyl diphosphatase activity","type":"related"},{"name":"C55-isoprenyl pyrophosphatase activity","type":"related"},{"name":"isoprenyl pyrophosphatase activity","type":"related"},{"name":"undecaprenyl-diphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050380"}


id: GO:0044452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar part (obsolete GO:0044452)","synonyms":[{"name":"nucleolus component","type":"exact"}],"termid":"GO:0044452"}


id: GO:0000015
data:
  {"annotated_genes":["SJAG_02107","SJAG_00461","SJAG_02369"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104613,104614,104615],"is_not":false,"summary":null,"term":"GO:0000015"}]},"cv_name":"cellular_component","definition":"A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_02107":null,"SJAG_02369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphopyruvate hydratase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"enolase complex","type":"exact"}],"termid":"GO:0000015","terms_by_termid":{"GO:0000015":null}}


id: GO:0009165
data:
  {"annotated_genes":["SJAG_03355","SJAG_01070","SJAG_02038","SJAG_02618","SJAG_04713","SJAG_02850","SJAG_00779","SJAG_03708","SJAG_01814","SJAG_01566","SJAG_04422","SJAG_03164","SJAG_02887","SJAG_00885","SJAG_03771","SJAG_01298","SJAG_03114","SJAG_00836","SJAG_04657","SJAG_00694","SJAG_00197","SJAG_04354","SJAG_02364","SJAG_03925","SJAG_04627","SJAG_04849","SJAG_02948","SJAG_04882","SJAG_04487","SJAG_00985","SJAG_MIT15","SJAG_00444","SJAG_01352","SJAG_05204","SJAG_01081","SJAG_04681","SJAG_06634","SJAG_00044","SJAG_03298","SJAG_00533","SJAG_04467","SJAG_03946","SJAG_02874","SJAG_01661","SJAG_04665","SJAG_04693","SJAG_03140","SJAG_00957","SJAG_04123","SJAG_00438","SJAG_03811","SJAG_02598","SJAG_05024","SJAG_00964","SJAG_01937","SJAG_04970","SJAG_01500","SJAG_04634","SJAG_00915","SJAG_MIT09","SJAG_01859","SJAG_00133","SJAG_02564","SJAG_04709","SJAG_00542","SJAG_07003","SJAG_02889","SJAG_04845","SJAG_01359","SJAG_01471","SJAG_01582","SJAG_02105","SJAG_MIT37","SJAG_04122"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102597,88089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[86996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[113639,116484,98765,109507,118104,96998,102598,109396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[92613,88659,115852,97696,111054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[71216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[97321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[92733,115973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[114711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[67423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[99258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[114046,92168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[91639,94683,106419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[96200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"},{"annotations":[117149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[88584,107531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[88585,91640,117150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[117151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[107532,98185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[113244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"},{"annotations":[114863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[59180,107423,100378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[92949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[101421,107424,99259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[118105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[100998,92951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[112223,98536,89860,90279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[99251,116430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[88228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[91119,95651,96668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[89861,88229,108770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[66820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[118193,102212,102859,114979,102830,92052,104168,93064,118188,92478,107939,94040,106967,107059,101002,88337,118182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[96905,88093,109073,114091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006164"},{"annotations":[109509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009152"},{"annotations":[117128],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[114712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[92169,91169,114048,87662,86680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[99260],"is_not":false,"re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chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic 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biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide anabolism","type":"exact"},{"name":"nucleotide biosynthesis","type":"exact"},{"name":"nucleotide formation","type":"exact"},{"name":"nucleotide synthesis","type":"exact"}],"termid":"GO:0009165","terms_by_termid":{"GO:0006164":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006188":null,"GO:0006189":null,"GO:0006225":null,"GO:0006226":null,"GO:0006227":null,"GO:0006228":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0006241":null,"GO:0006741":null,"GO:0006747":null,"GO:0009152":null,"GO:0009224":null,"GO:0009265":null,"GO:0009398":null,"GO:0009435":null,"GO:0015966":null,"GO:0015986":null,"GO:0019358":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0034356":null,"GO:0042776":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null,"GO:1905706":null}}


id: GO:2000533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal albumin absorption.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal albumin absorption","termid":"GO:2000532"},{"relation_name":"negatively_regulates","term_name":"renal albumin absorption","termid":"GO:0097018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal albumin absorption","termid":"GO:2000533"}


id: GO:0002894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of type II hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hypersensitivity","termid":"GO:0002885"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of type II hypersensitivity","termid":"GO:0002892"},{"relation_name":"positively_regulates","term_name":"type II hypersensitivity","termid":"GO:0002445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type II hypersensitivity","synonyms":[{"name":"activation of type II hypersensitivity","type":"narrow"},{"name":"stimulation of type II hypersensitivity","type":"narrow"},{"name":"up regulation of type II hypersensitivity","type":"exact"},{"name":"up-regulation of type II hypersensitivity","type":"exact"},{"name":"upregulation of type II hypersensitivity","type":"exact"}],"termid":"GO:0002894"}


id: PBO:0031884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved mitochondrial protein (predicted)","termid":"PBO:0031884"}


id: MONDO:0019666
data:
  {"annotated_genes":["SJAG_00084","SJAG_03475"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84536,84537],"is_not":false,"summary":null,"term":"MONDO:0019666"}]},"cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia characterized by short stature, short and bowed lower limbs, mild brachydactyly, kyphoscoliosis, abnormal gait, enlarged knee joints, precocious osteoarthropathy, and normal intelligence.","definition_xrefs":["Orphanet:93282"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_03475":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, PAPSS2 type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:719172003","MEDGEN:411234","DOID:0050812","OMIM:612847","GARD:16813","UMLS:C2748515"],"synonyms":[{"name":"BCYM4","type":"related"},{"name":"SEMD, Pakistani type","type":"related"},{"name":"brachyolmia 4 with mild epiphyseal and metaphyseal changes","type":"exact"},{"name":"brachyolmia type 4 with mild epiphyseal and metaphyseal changes","type":"related"},{"name":"spondylodysplasia and premature pubarche","type":"related"},{"name":"spondyloepimetaphyseal dysplasia Pakistani type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, Pakistani type","type":"exact"}],"termid":"MONDO:0019666","terms_by_termid":{"MONDO:0019666":null},"xrefs":{"Monarch":{"xref_id":"0019666"}}}


id: PBO:0057479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 598","termid":"PBO:0057479"}


id: GO:0060904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the protein folding process that takes place in the endoplasmic reticulum (ER). Secreted, plasma membrane and organelle proteins are folded in the ER, assisted by chaperones and foldases (protein disulphide isomerases), and additional factors required for optimal folding (ATP, Ca2+ and an oxidizing environment to allow disulfide bond formation).","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein folding","termid":"GO:1903332"},{"relation_name":"regulates","term_name":"protein folding in endoplasmic reticulum","termid":"GO:0034975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"regulation of protein folding in endoplasmic reticulum","termid":"GO:0060904"}


id: PBO:0071297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 20","termid":"PBO:0071297"}


id: FYPO:0007952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type), during stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during stationary phase","termid":"FYPO:0007952"}


id: GO:0031213
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals) and an RSF1 homolog. It mediates nucleosome deposition and generates regularly spaced nucleosome arrays. In mammals, RSF is involved in regulation of transcription from RNA polymerase II promoters).","definition_xrefs":["PMID:21810179","PMID:15284901","GOC:krc","PMID:12972596","PMID:16568949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"RSF complex","synonyms":[{"name":"remodeling and spacing factor complex","type":"exact"}],"termid":"GO:0031213"}


id: PBO:0080599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 33","termid":"PBO:0080599"}


id: PBO:0052435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin light chain 2","termid":"PBO:0052435"}


id: GO:0021921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the frequency, rate or extent of cell proliferation in the dorsal spinal cord.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"part_of","term_name":"dorsal spinal cord development","termid":"GO:0021516"},{"relation_name":"regulates","term_name":"cell proliferation in dorsal spinal cord","termid":"GO:0010456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation in dorsal spinal cord","termid":"GO:0021921"}


id: GO:0060342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane surrounding the inner segment of a vertebrate photoreceptor. The photoreceptor inner segment contains mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"photoreceptor inner segment","termid":"GO:0001917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"photoreceptor inner segment membrane","termid":"GO:0060342"}


id: PBO:0082133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin cortical patch component; interacts with the actin depolymerizing factor cofilin; inhibits elongation of aged ADP-actin filaments decorated with cofilin to maintain a high level of assembly-competent actin species; required to restrict cofilin localization to cortical patches; putative regulator of cytokinesis; contains WD repeats; mutations in human homolog WDR1 are associated with cardiac hypertrophy","termid":"PBO:0082133"}


id: PATO:0001201
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter Y.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tripartite","termid":"PATO:0001890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-shaped","termid":"PATO:0001201"}


id: GO:0003036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of hydrogen ions are received and are converted to a molecular signal by chemoreceptors in an aortic body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of pH by chemoreceptor signaling","termid":"GO:0003022"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","termid":"GO:0003033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of pH by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of pH by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003036"}


id: PBO:0068473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 51, pseudogene","termid":"PBO:0068473"}


id: GO:0021609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the accessory nerve This process pertains to the physical shaping of a rudimentary structure. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"accessory nerve morphogenesis","termid":"GO:0021607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve structural organization","synonyms":[{"name":"CN XI structural organization","type":"related"},{"name":"accessory nerve structural organisation","type":"exact"}],"termid":"GO:0021609"}


id: GO:1904037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell apoptotic process.","definition_xrefs":["PMID:19137015","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"positively_regulates","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell apoptotic process","synonyms":[{"name":"activation of epithelial cell apoptosis","type":"narrow"},{"name":"activation of epithelial cell apoptotic process","type":"narrow"},{"name":"activation of epitheliocyte apoptosis","type":"narrow"},{"name":"activation of epitheliocyte apoptotic process","type":"narrow"},{"name":"positive regulation of epithelial cell apoptosis","type":"narrow"},{"name":"positive regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"positive regulation of epitheliocyte apoptotic process","type":"exact"},{"name":"up regulation of epithelial cell apoptosis","type":"narrow"},{"name":"up regulation of epithelial cell apoptotic process","type":"exact"},{"name":"up regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"up regulation of epitheliocyte apoptotic process","type":"exact"},{"name":"up-regulation of epithelial cell apoptosis","type":"narrow"},{"name":"up-regulation of epithelial cell apoptotic process","type":"exact"},{"name":"up-regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"up-regulation of epitheliocyte apoptotic process","type":"exact"},{"name":"upregulation of epithelial cell apoptosis","type":"narrow"},{"name":"upregulation of epithelial cell apoptotic process","type":"exact"},{"name":"upregulation of epitheliocyte apoptosis","type":"narrow"},{"name":"upregulation of epitheliocyte apoptotic process","type":"exact"}],"termid":"GO:1904037"}


id: PBO:0074041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A24 pseudogene 2","termid":"PBO:0074041"}


id: MONDO:1010235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy, non-human animal","secondary_identifiers":["OMIA:000939"],"termid":"MONDO:1010235","xrefs":{"Monarch":{"xref_id":"1010235"}}}


id: MONDO:0700145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant lymphoproliferative disorder that affects dogs. It is characterized by the clonal proliferation of B- or T-lymphocytes in the lymph nodes, bone marrow, and/or extranodal sites.","definition_xrefs":["NCIT:C128121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine lymphoma","secondary_identifiers":["OMIA:001733-9615"],"termid":"MONDO:0700145","xrefs":{"Monarch":{"xref_id":"0700145"}}}


id: PBO:0067827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 129","termid":"PBO:0067827"}


id: PBO:0063196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 18","termid":"PBO:0063196"}


id: PBO:0025479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide dioxygenase Yhb1","termid":"PBO:0025479"}


id: GO:1990344
data:
  {"annotated_genes":["SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114954],"is_not":false,"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a secondary cell septum following nuclear division.","definition_xrefs":["PMID:22891259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"},{"relation_name":"part_of","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"secondary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990344","terms_by_termid":{"GO:1990344":null}}


id: PBO:0075472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 22","termid":"PBO:0075472"}


id: PBO:0054447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1844","termid":"PBO:0054447"}


id: MONDO:0010739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taqi polymorphism","secondary_identifiers":["OMIM:313480","UMLS:C1839238","MEDGEN:374172"],"synonyms":[{"name":"TAQ1","type":"related"},{"name":"TaqI polymorphism","type":"related"},{"name":"Taqi polymorphism","type":"exact"}],"termid":"MONDO:0010739","xrefs":{"Monarch":{"xref_id":"0010739"}}}


id: PBO:0074508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP associated protein","termid":"PBO:0074508"}


id: GO:0001656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:bf","ISBN:0192800752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephros development","termid":"GO:0001656"}


id: PBO:0058242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4529","termid":"PBO:0058242"}


id: PBO:0070947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 2","termid":"PBO:0070947"}


id: FYPO:0007552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein ubiquitination during cellular response to hydroxyurea","synonyms":[{"name":"normal protein ubiquitination during cellular response to HU","type":"exact"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein ubiquitinylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein ubiquitylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein/peptide ubiquitination during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007552"}


id: PBO:0039883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 antisense RNA 1","termid":"PBO:0039883"}


id: SO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that alters the level or amount of gene product produced. This high level term can be applied where the direction of level change (increased vs decreased gene product level) is unknown or not confirmed.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altered_gene_product_level","synonyms":[{"name":"altered gene product level","type":"exact"},{"name":"altered transcription level","type":"exact"},{"name":"altered_transcription_level","type":"exact"}],"termid":"SO:0002314"}


id: GO:0005890
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sodium:potassium-exchanging ATPases are tetrameric proteins, consisting of two large alpha subunits and two smaller beta subunits. The alpha subunits bear the active site and penetrate the membrane, while the beta subunits carry oligosaccharide groups and face the cell exterior.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium:potassium-exchanging ATPase complex","synonyms":[{"name":"sodium pump","type":"broad"},{"name":"sodium/potassium-exchanging ATPase complex","type":"exact"}],"termid":"GO:0005890"}


id: PBO:0083446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ATP14","termid":"PBO:0083446"}


id: PBO:0090561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase, Sirtuin family, NAD-dependent Sir2","termid":"PBO:0090561"}


id: PBO:0042877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 157","termid":"PBO:0042877"}


id: PBO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (predicted)","termid":"PBO:0004492"}


id: FYPO:0006466
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature non-coding RNA (ncRNA) measured in a cell is lower than normal. Total ncRNA or a specific ncRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased mature ncRNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased mature ncRNA accumulation","type":"related"},{"name":"decreased mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature ncRNA level during vegetative growth","type":"exact"},{"name":"decreased mature ncRNA transcript level","type":"exact"},{"name":"decreased mature non-coding RNA level","type":"exact"},{"name":"decreased ncRNA level","type":"broad"},{"name":"reduced mature ncRNA level","type":"exact"}],"termid":"FYPO:0006466","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: PBO:0063611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFDN1 pseudogene 2","termid":"PBO:0063611"}


id: GO:0051687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the spindle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle localization","termid":"GO:0051653"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of spindle location","synonyms":[{"name":"maintenance of spindle localization","type":"related"}],"termid":"GO:0051687"}


id: GO:1904563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol 5-phosphate.","definition_xrefs":["GO_REF:0000068","GOC:dph","GOC:PARL","PMID:23916588","GOC:pad","GOC:TermGenie","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate biosynthetic process","termid":"GO:0046854"},{"relation_name":"is_a","term_name":"phosphatidylinositol 5-phosphate metabolic process","termid":"GO:1904562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol 5-phosphate biosynthetic process","synonyms":[{"name":"phosphatidylinositol 5-phosphate anabolism","type":"exact"},{"name":"phosphatidylinositol 5-phosphate biosynthesis","type":"exact"},{"name":"phosphatidylinositol 5-phosphate formation","type":"exact"},{"name":"phosphatidylinositol 5-phosphate synthesis","type":"exact"}],"termid":"GO:1904563"}


id: MONDO:0000151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism","secondary_identifiers":["MEDGEN:1846284","SCTID:253975004","UMLS:C5848178"],"termid":"MONDO:0000151","xrefs":{"Monarch":{"xref_id":"0000151"}}}


id: PBO:0065114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCH antisense RNA 1","termid":"PBO:0065114"}


id: PATO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A length quality which is equal to the length of any straight line segment that passes through the center of a circle and whose endpoints are on the circular boundary.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Diameter"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diameter","termid":"PATO:0001334"}


id: PBO:0063848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 1","termid":"PBO:0063848"}


id: PBO:0089705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase beta subunit Atp2","termid":"PBO:0089705"}


id: GO:0048765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a root hair cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"},{"relation_name":"is_a","term_name":"trichoblast maturation","termid":"GO:0048764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair cell differentiation","termid":"GO:0048765"}


id: GO:0006536
data:
  {"annotated_genes":["SJAG_02235","SJAG_03306","SJAG_04054","SJAG_00695","SJAG_00495","SJAG_03434","SJAG_04145","SJAG_03457","SJAG_00359","SJAG_03266","SJAG_00937","SJAG_00529","SJAG_01592","SJAG_03224","SJAG_01903","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87054,90089,92137,101805,103919,110957,111047],"is_not":false,"summary":null,"term":"GO:0006536"},{"annotations":[100715,116863,93472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[105930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[78936,90906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[100716,116864,110377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[106279,117131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_00495":null,"SJAG_00529":null,"SJAG_00695":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_01592":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_03224":null,"SJAG_03266":null,"SJAG_03306":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_04054":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"glutamate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glutamic_acid"],"synonyms":[{"name":"glutamate metabolism","type":"exact"},{"name":"glutamic acid metabolic process","type":"exact"},{"name":"glutamic acid metabolism","type":"exact"}],"termid":"GO:0006536","terms_by_termid":{"GO:0006536":null,"GO:0006538":null,"GO:0010133":null,"GO:0019544":null,"GO:0019676":null,"GO:0097054":null}}


id: GO:2000452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CD8-positive, alpha-beta cytotoxic T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000449"},{"relation_name":"regulates","term_name":"CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:0035698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000452"}


id: MONDO:0011251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","secondary_identifiers":["MEDGEN:400705","UMLS:C1865203","MESH:C566524","OMIM:602556"],"synonyms":[{"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","type":"exact"}],"termid":"MONDO:0011251","xrefs":{"Monarch":{"xref_id":"0011251"}}}


id: GO:0008677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantoate + NADP+ = 2-dehydropantoate + H+ + NADPH.","definition_xrefs":["RHEA:16233","EC:1.1.1.169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-dehydropantoate 2-reductase activity","secondary_identifiers":["KEGG_REACTION:R02472","MetaCyc:2-DEHYDROPANTOATE-REDUCT-RXN"],"synonyms":[{"name":"(R)-pantoate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"2-ketopantoate reductase activity","type":"related"},{"name":"2-ketopantoic acid reductase activity","type":"related"},{"name":"2-oxopantoate reductase activity","type":"related"},{"name":"KPA reductase activity","type":"related"},{"name":"ketopantoate reductase activity","type":"related"},{"name":"ketopantoic acid reductase activity","type":"related"}],"termid":"GO:0008677"}


id: GO:0120151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic actomyosin contractile ring disassembly.","definition_xrefs":["PMID:19109423"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic actomyosin contractile ring disassembly (obsolete GO:0120151)","termid":"GO:0120151"}


id: MONDO:0017852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurologic disorder characterized by profound developmental delay, facial dysmorphism (i.e. microcephaly, large anterior fontanel, hypertelorism, downslanting palpebral fissures, beaked nose, micrognathia), broad thumbs and flexion and/or extension spasms. Bilateral cataracts, hypertrophic cardiomyopathy and hydrocele have also been reported. EEG shows hypsarrhythmic features and MRI may reveal partial agenesis of the corpus callosum, mild brain atrophy and/or ventriculomegaly. There have been no further descriptions in the literature since 1990.","definition_xrefs":["Orphanet:3173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"infantile spasms-broad thumbs syndrome","secondary_identifiers":["MEDGEN:1667345","UMLS:C4749287","GARD:3002"],"synonyms":[{"name":"Tsao Ellingson syndrome","type":"related"},{"name":"Tsao-Ellingson syndrome","type":"exact"},{"name":"infantile spasms broad thumbs","type":"related"}],"termid":"MONDO:0017852","xrefs":{"Monarch":{"xref_id":"0017852"}}}


id: GO:0004590
data:
  {"annotated_genes":["SJAG_03164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115853],"is_not":false,"summary":null,"term":"GO:0004590"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + orotidine 5'-phosphate = CO2 + UMP.","definition_xrefs":["EC:4.1.1.23","RHEA:11596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"orotidine-5'-phosphate decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73564","KEGG_REACTION:R00965","MetaCyc:OROTPDECARB-RXN"],"synonyms":[{"name":"ODCase activity","type":"related"},{"name":"OMP decarboxylase activity","type":"related"},{"name":"OMP-DC","type":"related"},{"name":"OMPdcase activity","type":"related"},{"name":"UMP synthase activity","type":"related"},{"name":"orotate decarboxylase activity","type":"related"},{"name":"orotate monophosphate decarboxylase activity","type":"related"},{"name":"orotic decarboxylase activity","type":"related"},{"name":"orotidine 5'-phosphate decarboxylase activity","type":"related"},{"name":"orotidine monophosphate decarboxylase activity","type":"related"},{"name":"orotidine phosphate decarboxylase activity","type":"related"},{"name":"orotidine-5'-monophosphate decarboxylase activity","type":"related"},{"name":"orotidine-5'-phosphate carboxy-lyase (UMP-forming)","type":"related"},{"name":"orotidine-5'-phosphate carboxy-lyase activity","type":"related"},{"name":"orotidylic acid decarboxylase activity","type":"related"},{"name":"orotidylic decarboxylase activity","type":"related"},{"name":"orotodylate decarboxylase activity","type":"related"},{"name":"uridine 5'-monophosphate synthase activity","type":"related"}],"termid":"GO:0004590","terms_by_termid":{"GO:0004590":null}}


id: PR:O94280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 47 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0674 endoplasmic reticulum membrane protein C2G5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.01","secondary_identifiers":["UniProtKB:O94280"],"synonyms":[{"name":"Spom972h-CCDC47","type":"exact"}],"termid":"PR:O94280"}


id: PR:Q9P6R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13E7.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6R3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13E7.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.07","synonyms":[{"name":"Spom972h-SPBC13E7.07","type":"exact"}],"termid":"PR:Q9P6R3"}


id: GO:0008534
data:
  {"annotated_genes":["SJAG_03724","SJAG_02261","SJAG_01119"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95346],"is_not":false,"summary":null,"term":"GO:0008534"},{"annotations":[94065,73468,95343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme-substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site.","definition_xrefs":["PMID:11554296","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787","GO:0140097"],"is_obsolete":false,"name":"oxidized purine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110244","MetaCyc:3.2.2.23-RXN","Reactome:R-HSA-110229","Reactome:R-HSA-110243","GO:0003907","EC:3.2.2.23"],"synonyms":[{"name":"2,6-diamino-4-hydroxy-5(N-methyl)formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"2,6-diamino-4-hydroxy-5N-formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"8-oxoguanine DNA glycosylase activity","type":"broad"},{"name":"DNA glycohydrolase [2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimide releasing]","type":"related"},{"name":"DNA glycosylase/AP-lyase activity","type":"broad"},{"name":"DNA glycosylase/beta-lyase activity","type":"broad"},{"name":"DNA-formamidopyrimidine glycosylase activity","type":"related"},{"name":"Fapy-DNA glycosylase activity","type":"related"},{"name":"Fpg protein","type":"related"},{"name":"bifunctional DNA glycosylase activity","type":"broad"},{"name":"deoxyribonucleate glycosidase activity","type":"related"},{"name":"formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"oxidized purine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"purine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0008534","terms_by_termid":{"GO:0008534":null,"GO:0034039":null}}


id: GO:0034812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,10-dihydroxybenzo(a)pyrene + O2 = cis-4-(8-hydroxypyren-7-yl)-2-oxobut-3-enoate.","definition_xrefs":["UM-BBD_reactionID:r1134"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,10-dihydroxybenzo(a)pyrene dioxygenase activity (obsolete GO:0034812)","termid":"GO:0034812"}


id: MONDO:0002647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic, bacterial or viral inflammatory process affecting the larynx. Signs and symptoms include sore throat, cough, swallowing difficulties, and hoarseness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngitis","secondary_identifiers":["SCTID:45913009","DOID:3437","MEDGEN:7273","MESH:D007827","NCIT:C26811","UMLS:C0023067","ICD9:464.00"],"synonyms":[{"name":"inflammation of larynx","type":"exact"},{"name":"laryngeal Inflammation","type":"exact"},{"name":"laryngeal inflammation","type":"exact"},{"name":"larynx inflammation","type":"exact"}],"termid":"MONDO:0002647","xrefs":{"Monarch":{"xref_id":"0002647"}}}


id: CHEBI:46442
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanadate(3-)","termid":"CHEBI:46442"}


id: MOD:00496
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 125 is merged with entry 199, remap to id: MOD:00552","definition_xrefs":["Unimod:125"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00496 reductive amination-D (obsolete MOD:00496)","termid":"MOD:00496"}


id: GO:1990905
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, flexible, finger-like projection of cytoplasm containing an array of microtubles and located near the flagellar pores in some photosynthetic as well as nonphotosynthetic dinoflagellate species. Its functions are not fully understood, but it has been associated with feeding behavior (phagotrophy).","definition_xrefs":["GOC:at","Wikipedia:Dinoflagellate","PMID:1480107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate peduncle","termid":"GO:1990905"}


id: GO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + cholesterol + O2 = 25-hydroxycholesterol + A + H2O.","definition_xrefs":["RHEA:21104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholesterol 25-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07218","EC:1.14.99.38","MetaCyc:1.14.99.38-RXN"],"synonyms":[{"name":"cholesterol 25-monooxygenase activity","type":"related"},{"name":"cholesterol,hydrogen-donor:oxygen oxidoreductase (25-hydroxylating) activity","type":"related"}],"termid":"GO:0001567"}


id: PBO:0072709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 3","termid":"PBO:0072709"}


id: MOD:00993
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenyl ester","synonyms":[{"name":"OPh","type":"exact"}],"termid":"MOD:00993"}


id: PR:O74383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3H7.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.08c","synonyms":[{"name":"Spom972h-SPBC3H7.08c","type":"exact"}],"termid":"PR:O74383"}


id: GO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process involved in cell fate commitment that occurs after cell fate specification, in which a cell is irreversibly committed to a cellular developmental fate which is heritable on cell division.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination","secondary_identifiers":["Wikipedia:Cell_fate_determination"],"termid":"GO:0001709"}


id: GO:0032550
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to a purine ribonucleoside, a compound consisting of a purine base linked to ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside binding","termid":"GO:0001883"},{"relation_name":"is_a","term_name":"ribonucleoside binding","termid":"GO:0032549"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"purine ribonucleoside binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032550","terms_by_termid":{"GO:1905108":null}}


id: MONDO:0800441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart disease that includes congenital heart defects, abnormal cardiac conduction or myopathy. Congenital heart defects consists of any heart disease that is present at birth. Representative examples include atrial septal defect, ventricular septal defect, tetralogy of Fallot, and hypoplastic left heart syndrome.","definition_xrefs":["PMID:21165553","PMID:21110066","PMID:34214246","PMID:10587520","PMID:20456451","PMID:11714651","PMID:14607454","PMID:15810002","PMID:16896344","PMID:19948535","PMID:20659440","PMID:28991257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"NKX2.5-related congenital, conduction and myopathic heart disease","synonyms":[{"name":"NKX2-5-related congenital, conduction and myopathic heart disease","type":"exact"}],"termid":"MONDO:0800441","xrefs":{"Monarch":{"xref_id":"0800441"}}}


id: PBO:0091590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element (truncation) Wtf1","termid":"PBO:0091590"}


id: MONDO:0850010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital optic disk excavation","secondary_identifiers":["MEDGEN:1842935","UMLS:C5681348","GARD:22112","Orphanet:519333"],"termid":"MONDO:0850010","xrefs":{"Monarch":{"xref_id":"0850010"}}}


id: GO:0036517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a serotonergic neuron growth cone is directed to a specific target site in response to an attractive chemical signal.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:21106844","CL:0000850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemoattraction of axon","termid":"GO:0061642"},{"relation_name":"part_of","term_name":"serotonergic neuron axon guidance","termid":"GO:0036515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of serotonergic neuron axon","synonyms":[{"name":"chemoattraction of 5-HT axon","type":"exact"},{"name":"chemoattraction of serotonergic axon","type":"exact"}],"termid":"GO:0036517"}


id: MONDO:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short-rib thoracic dysplasia (obsolete MONDO:0000021)","termid":"MONDO:0000021","xrefs":{"Monarch":{"xref_id":"0000021"}}}


id: PBO:0089033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rieske ISP assembly ATPase Bcs1","termid":"PBO:0089033"}


id: GO:0009985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroflavonol(thiole) lyase activity (obsolete GO:0009985)","synonyms":[{"name":"dihydroflavonol(thiole) lyase activity","type":"exact"}],"termid":"GO:0009985"}


id: GO:0102193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a [protein]-N6-D-ribulosyl-L-lysine = ADP + a [protein]-N6-(3-O-phospho-D-ribulosyl)-L-lysine.","definition_xrefs":["GOC:pz","EC:2.7.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein-ribulosamine 3-kinase activity","secondary_identifiers":["RHEA:48432","MetaCyc:RXN-12003"],"termid":"GO:0102193"}


id: MONDO:0010812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocytosis, familial","secondary_identifiers":["MEDGEN:333150","UMLS:C1838656","MESH:C564004","OMIM:600084"],"synonyms":[{"name":"macrocytosis, familial","type":"exact"}],"termid":"MONDO:0010812","xrefs":{"Monarch":{"xref_id":"0010812"}}}


id: MONDO:0100388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly Monosomy 5. (A cytogenetic aneuploidy abnormality that refers to the presence of one chromosome 5 only. It is associated with the development of refractory anemia with excess blasts, refractory anemia with multilineage dysplasia, and refractory anemia with multilineage dysplasia and ringed sideroblasts.)","definition_xrefs":["NCIT:C36523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, Monosomy 5","synonyms":[{"name":"AML, Monosomy 5","type":"exact"}],"termid":"MONDO:0100388","xrefs":{"Monarch":{"xref_id":"0100388"}}}


id: GO:0018428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of copper into a copper-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper incorporation into metallo-sulfur cluster","termid":"GO:0018427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"copper incorporation into copper-sulfur cluster","synonyms":[{"name":"copper incorporation into copper-sulphur cluster","type":"exact"}],"termid":"GO:0018428"}


id: GO:0008270
data:
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id: PBO:0074551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 4","termid":"PBO:0074551"}


id: PBO:0088800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein, involved in chromatin remodeling","termid":"PBO:0088800"}


id: MONDO:0013082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, developmental defect during embryogenesis syndrome characterized by total or partial colonic aganglionosis associated with peripheral, usually multifocal, neuroblastic tumors (ganglioneuroblastoma, neuroblastoma, ganglioneuroma). Congenital central hypoventilation syndrome, with variable severity of respiratory compromise, cardiovascular and ophthalmologic symptoms, consistent with autonomic nervous system dysfunction, is occasionally associated.","definition_xrefs":["Orphanet:2151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease-ganglioneuroblastoma syndrome","secondary_identifiers":["MEDGEN:1683967","UMLS:C5191058","GARD:2695","MESH:C538119"],"synonyms":[{"name":"Hirschsprung disease ganglioneuroblastoma","type":"related"},{"name":"neuroblastoma with Hirschsprung disease","type":"related"}],"termid":"MONDO:0013082","xrefs":{"Monarch":{"xref_id":"0013082"}}}


id: FYPO:0003790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type) during the first or second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiotic cell cycle","termid":"FYPO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization during meiosis","synonyms":[{"name":"normal protein localisation during meiosis","type":"exact"},{"name":"normal protein localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003790"}


id: GO:0070660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new inner ear sensory hair cells to replace those lost or destroyed by injury.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"},{"relation_name":"part_of","term_name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell differentiation involved in inner ear sensory epithelium regeneration","termid":"GO:0070660"}


id: PBO:0034037
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_abstract","termid":"PBO:0034037"}


id: PBO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 like exosome 3'-5' exoribonuclease","termid":"PBO:0045028"}


id: PBO:0041677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 3","termid":"PBO:0041677"}


id: FYPO:0006743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to osmotic stress","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to osmotic stress","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during osmotic stress","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006743"}


id: PBO:0017077
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P cleavage specifity not affected by sequences flanking the G+1 cleavage site","termid":"PBO:0017077"}


id: MONDO:0017755
data:
  {"annotated_genes":["SJAG_05213","SJAG_03011","SJAG_05194","SJAG_00938","SJAG_03363","SJAG_01344","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[86014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[86199,86198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[85103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[84529,84531,84530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"},{"annotations":[86137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[84769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"An instance of bilirubin metabolism disease that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of porphyrin metabolism","termid":"MONDO:0017754"},{"relation_name":"is_a","term_name":"bilirubin metabolism disease","termid":"MONDO:0024431"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01344":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03785":null,"SJAG_05194":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of bilirubin metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1297666279","GARD:21347","Orphanet:309816","UMLS:C0349427","MEDGEN:1671515"],"synonyms":[{"name":"bilirubin metabolism disorder","type":"related"},{"name":"disorder of bilirubin metabolism","type":"broad"},{"name":"disorder of bilirubin metabolism and excretion","type":"exact"},{"name":"hereditary bilirubin metabolism disease","type":"exact"},{"name":"inborn disorder of bilirubin metabolism and excretion","type":"exact"}],"termid":"MONDO:0017755","terms_by_termid":{"MONDO:0008822":null,"MONDO:0009380":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0017755"}}}


id: GO:0048550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pinocytosis. Pinocytosis is the process in which cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of pinocytosis","termid":"GO:0048548"},{"relation_name":"negatively_regulates","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of pinocytosis","synonyms":[{"name":"down regulation of pinocytosis","type":"exact"},{"name":"down-regulation of pinocytosis","type":"exact"},{"name":"downregulation of pinocytosis","type":"exact"},{"name":"inhibition of pinocytosis","type":"narrow"}],"termid":"GO:0048550"}


id: PATO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting no deviation from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"normal","synonyms":[{"name":"average","type":"related"}],"termid":"PATO:0000461"}


id: PBO:0087691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport and NPC biogenesis and is involved in establishment of a normal nucleocytoplasmic concentration gradient of the GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at the nuclear periphery, including double-strand break repair, transcription and chromatin silencing; homologous to human NUP160","termid":"PBO:0087691"}


id: SO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA sequence that has catalytic activity with or without an associated ribonucleoprotein.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"enzymatic","termid":"SO:0001185"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzymatic_RNA","synonyms":[{"name":"enzymatic RNA","type":"exact"}],"termid":"SO:0000372"}


id: PBO:0042715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cementum protein 1","termid":"PBO:0042715"}


id: PBO:0073055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCYL2 pseudogene 1","termid":"PBO:0073055"}


id: PBO:0058338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4712","termid":"PBO:0058338"}


id: PR:Q9UTD5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg10 gene.","definition_xrefs":["UniProtKB:Q9UTD5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like-conjugating enzyme ATG10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.04","synonyms":[{"name":"Spom972h-atg10","type":"exact"},{"name":"autophagy-related protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTD5"}


id: MONDO:0021054
data:
  {"annotated_genes":["SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A sarcoma that arises from the bone. Representative examples are osteosarcoma and chondrosarcoma.","definition_xrefs":["NCIT:C9312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone sarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20547","SCTID:448710000","Orphanet:223727","MedDRA:10006007","ICD9:170.9","MEDGEN:352831","DOID:0080639","UMLS:C1704327"],"synonyms":[{"name":"bone sarcoma","type":"exact"},{"name":"osseous sarcoma","type":"exact"},{"name":"sarcoma of bone","type":"exact"},{"name":"sarcoma of the bone","type":"exact"},{"name":"skeletal sarcoma","type":"exact"}],"termid":"MONDO:0021054","terms_by_termid":{"MONDO:0002629":null},"xrefs":{"Monarch":{"xref_id":"0021054"}}}


id: GO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA exon ligation process that rejoins two exons of a pre-tRNA which has had the intron removed.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exon ligation","termid":"GO:0000378"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA exon ligation","termid":"GO:0000968"}


id: PBO:0027520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_phase","termid":"PBO:0027520"}


id: PR:P0CS87
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBCPT2R1.01c gene.","definition_xrefs":["UniProtKB:P0CS87","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein CPT2R1.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.01c","synonyms":[{"name":"Spom972h-SPBCPT2R1.01c","type":"exact"}],"termid":"PR:P0CS87"}


id: GO:0060406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of penile erection. Penile erection is the hardening, enlarging and rising of the penis which often occurs in the sexually aroused male and enables sexual intercourse. Achieved by increased inflow of blood into the vessels of erectile tissue, and decreased outflow.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of penile erection","termid":"GO:0060405"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"penile erection","termid":"GO:0043084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of penile erection","termid":"GO:0060406"}


id: PBO:0085162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide pyrophosphatase/phosphodiesterase; mediates extracellular nucleotide phosphate hydrolysis along with Npp1p and Pho5p; activity and expression enhanced during conditions of phosphate starvation; involved in spore wall assembly; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; NPP2 has a paralog, NPP1, that arose from the whole genome duplication; npp1 npp2 double mutant exhibits reduced dityrosine fluorescence relative to single mutants","termid":"PBO:0085162"}


id: GO:0046009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of female receptivity","termid":"GO:0045925"},{"relation_name":"is_a","term_name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female receptivity, post-mating","synonyms":[{"name":"activation of female receptivity, post-mating","type":"narrow"},{"name":"stimulation of female receptivity, post-mating","type":"narrow"},{"name":"up regulation of female receptivity, post-mating","type":"exact"},{"name":"up-regulation of female receptivity, post-mating","type":"exact"},{"name":"upregulation of female receptivity, post-mating","type":"exact"}],"termid":"GO:0046009"}


id: MONDO:0020350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Miller-Fisher syndrome (obsolete MONDO:0020350)","termid":"MONDO:0020350","xrefs":{"Monarch":{"xref_id":"0020350"}}}


id: PBO:0062420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 62 pseudogene","termid":"PBO:0062420"}


id: PBO:0056506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose binding lectin 1, pseudogene","termid":"PBO:0056506"}


id: PBO:0110985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting regulatory lncRNA nam1, byr2 repressing","termid":"PBO:0110985"}


id: PBO:0017865
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli fbp","termid":"PBO:0017865"}


id: MONDO:0033169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curariform drugs toxicity","secondary_identifiers":["Orphanet:413693"],"termid":"MONDO:0033169","xrefs":{"Monarch":{"xref_id":"0033169"}}}


id: PBO:0065542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotriesterase related","termid":"PBO:0065542"}


id: MONDO:0009269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any geleophysic dysplasia in which the cause of the disease is a mutation in the ADAMTSL2 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"geleophysic dysplasia","termid":"MONDO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geleophysic dysplasia 1","secondary_identifiers":["GARD:15172","UMLS:C3278147","MEDGEN:479777","OMIM:231050","DOID:0111725"],"synonyms":[{"name":"ADAMTSL2 geleophysic dysplasia","type":"exact"},{"name":"GELEOPHYSIC dysplasia 1","type":"related"},{"name":"GPHYSD1","type":"related"},{"name":"Geleophysic dysplasia type 1","type":"exact"},{"name":"geleophysic dysplasia 1","type":"exact"},{"name":"geleophysic dysplasia caused by mutation in ADAMTSL2","type":"exact"}],"termid":"MONDO:0009269","xrefs":{"Monarch":{"xref_id":"0009269"}}}


id: FYPO:0003041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of small nuclear RNA (snRNA) primary transcripts is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA splicing","termid":"FYPO:0003040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased snRNA splicing","synonyms":[{"name":"decreased snRNA primary transcript RNA splicing","type":"exact"},{"name":"decreased snRNA splicing during mitotic cell cycle","type":"related"},{"name":"decreased snRNA splicing during vegetative growth","type":"exact"},{"name":"increased snRNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"},{"name":"reduced snRNA splicing","type":"exact"}],"termid":"FYPO:0003041"}


id: CHEBI:76243
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrous ammonium sulfate (anhydrous)","termid":"CHEBI:76243"}


id: PBO:0088268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic histidine-tRNA ligase Hrs1","termid":"PBO:0088268"}


id: PBO:0039213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C4","termid":"PBO:0039213"}


id: PBO:0059452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSANTD3-TMEFF1 readthrough","termid":"PBO:0059452"}


id: PBO:0067171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 225, pseudogene","termid":"PBO:0067171"}


id: MONDO:0021496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"lip neoplasm","termid":"MONDO:0021249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of lip","secondary_identifiers":["NCIT:C3591","icd11.foundation:2019143477","MEDGEN:102294","UMLS:C0153932","ICD9:210.0","ICD10CM:D10.0","SCTID:92185002"],"synonyms":[{"name":"benign Lip neoplasm","type":"exact"},{"name":"benign Lip tumor","type":"exact"},{"name":"benign Lip tumour","type":"exact"},{"name":"benign neoplasm of the Lip","type":"exact"},{"name":"benign tumor of Lip","type":"exact"},{"name":"benign tumor of the Lip","type":"exact"},{"name":"benign tumour of Lip","type":"exact"},{"name":"benign tumour of the Lip","type":"exact"},{"name":"lip benign neoplasm","type":"exact"},{"name":"lip neoplasm, benign","type":"exact"}],"termid":"MONDO:0021496","xrefs":{"Monarch":{"xref_id":"0021496"}}}


id: FYPO:0007867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or both poles of the meiotic spindle is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle","termid":"FYPO:0007866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole during meiosis I","synonyms":[{"name":"normal protein localisation to meiotic spindle pole during meiosis I","type":"exact"},{"name":"normal protein localisation to spindle pole during meiosis I","type":"exact"},{"name":"normal protein localization to meiosis I spindle pole","type":"exact"},{"name":"normal protein localization to spindle pole during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007867"}


id: GO:0045648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"positively_regulates","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte differentiation","synonyms":[{"name":"activation of erythrocyte differentiation","type":"narrow"},{"name":"positive regulation of RBC differentiation","type":"exact"},{"name":"positive regulation of red blood cell differentiation","type":"exact"},{"name":"stimulation of erythrocyte differentiation","type":"narrow"},{"name":"up regulation of erythrocyte differentiation","type":"exact"},{"name":"up-regulation of erythrocyte differentiation","type":"exact"},{"name":"upregulation of erythrocyte differentiation","type":"exact"}],"termid":"GO:0045648"}


id: MONDO:1012178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus epilepsy of Lafora, non-human animal","termid":"MONDO:1011627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, dog","secondary_identifiers":["OMIA:000690-9615"],"termid":"MONDO:1012178","xrefs":{"Monarch":{"xref_id":"1012178"}}}


id: PBO:0074270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 12","termid":"PBO:0074270"}


id: MOD:01786
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-nitro-L-tyrosine.","definition_xrefs":["PubMed:5339594","PubMed:16944230","ChEBI:44454","RESID:AA0537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrated L-tyrosine","termid":"MOD:01352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-nitro-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-hydroxy-3-nitrophenyl)propanoic acid","type":"exact"},{"name":"3'-nitro-L-tyrosine","type":"exact"},{"name":"3-nitro-L-tyrosine","type":"exact"},{"name":"3-nitrotyrosine","type":"exact"},{"name":"MOD_RES 3'-Nitrotyrosine","type":"exact"},{"name":"m-nitrotyrosine","type":"exact"},{"name":"meta-nitrotyrosine","type":"exact"}],"termid":"MOD:01786"}


id: FYPO:0004514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype in which a cell has no septum, is elongated, and is viable.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable elongated aseptate vegetative cell (obsolete FYPO:0004514)","synonyms":[{"name":"viable elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"viable elongated aseptate cell during vegetative growth","type":"exact"},{"name":"viable long aseptate cell","type":"exact"}],"termid":"FYPO:0004514"}


id: PBO:0028896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_maintenance","termid":"PBO:0028896"}


id: PBO:0061434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group I member 3","termid":"PBO:0061434"}


id: MONDO:0013999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare presumably genetic disorder characterized by idiopathic massive splenomegaly with pancytopenia and childhood-onset chronic optic nerve edema with slowly progressive vision loss. Additional reported features include anhidrosis, urticaria and headaches.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal dystrophy, optic nerve edema, splenomegaly, anhidrosis, and migraine headache syndrome","secondary_identifiers":["OMIM:614979","Orphanet:313800","MEDGEN:1662266","GARD:17411","UMLS:C4749914"],"synonyms":[{"name":"ROSAH","type":"exact"},{"name":"ROSAH syndrome","type":"exact"},{"name":"optic nerve edema-splenomegaly syndrome","type":"exact"},{"name":"retinal dystrophy, optic nerve edema, splenomegaly, anhidrosis, and headache","type":"exact"},{"name":"splenomegaly, cytopenia, and vision loss","type":"related"}],"termid":"MONDO:0013999","xrefs":{"Monarch":{"xref_id":"0013999"}}}


id: MONDO:0022577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital malformation syndrome characterized by partial duplication of the left lower limb and aplasia of the ipsilateral kidney, plus other congenital malformations.","definition_xrefs":["PMID:3282726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Billet Bear syndrome","synonyms":[{"name":"lower limb partial duplication renal agenesis","type":"related"}],"termid":"MONDO:0022577","xrefs":{"Monarch":{"xref_id":"0022577"}}}


id: PBO:0076133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 4","termid":"PBO:0076133"}


id: GO:0034005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-(R)-germacrene A + diphosphate.","definition_xrefs":["EC:4.2.3.23","RHEA:12516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"germacrene-A synthase activity","secondary_identifiers":["MetaCyc:RXN-11527","KEGG_REACTION:R07649"],"synonyms":[{"name":"(+)-(10R)-germacrene A synthase activity","type":"related"},{"name":"(+)-germacrene A synthase activity","type":"related"},{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (germacrene-A-forming) activity","type":"related"},{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase [(+)-germacrene-A-forming] activity","type":"related"},{"name":"GAS","type":"related"},{"name":"germacrene A synthase activity","type":"related"}],"termid":"GO:0034005"}


id: MONDO:0012776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 7","secondary_identifiers":["UMLS:C2677607","OMIM:612005","MEDGEN:394328"],"synonyms":[{"name":"CELIAC7","type":"exact"},{"name":"celiac disease, susceptibility to, 7","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 7","type":"related"}],"termid":"MONDO:0012776","xrefs":{"Monarch":{"xref_id":"0012776"}}}


id: PBO:0068450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 24, pseudogene","termid":"PBO:0068450"}


id: PBO:0013752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-tRNA processing endonuclease tRNAse Z L2 Trz1","termid":"PBO:0013752"}


id: PBO:0051937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intelectin 1","termid":"PBO:0051937"}


id: GO:1903115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament-based movement.","definition_xrefs":["PMID:24798735","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based process","termid":"GO:0032970"},{"relation_name":"regulates","term_name":"actin filament-based movement","termid":"GO:0030048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament-based movement","termid":"GO:1903115"}


id: PBO:0078237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 19","termid":"PBO:0078237"}


id: PBO:0029978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_export_from_nucleus","termid":"PBO:0029978"}


id: SO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non functional descendant of the coding portion of a coding transcript, part of a pseudogene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_region","termid":"SO:0000462"},{"relation_name":"part_of","term_name":"pseudogenic_transcript","termid":"SO:0000516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_CDS","synonyms":[{"name":"INSDC_feature:CDS","type":"broad"},{"name":"INSDC_qualifier:pseudo","type":"exact"},{"name":"pseudogenic CDS","type":"exact"}],"termid":"SO:0002087"}


id: MONDO:1012183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"subacute progressive myopathy, non-human animal","termid":"MONDO:1011792"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute progressive myopathy, dog","secondary_identifiers":["OMIA:000696-9615"],"termid":"MONDO:1012183","xrefs":{"Monarch":{"xref_id":"1012183"}}}


id: FYPO:0000174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal cell wall","termid":"FYPO:0002946"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall biogenesis","synonyms":[{"name":"abnormal fungal-type cell wall biogenesis","type":"exact"}],"termid":"FYPO:0000174"}


id: SO:0001857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCAGCC, bound by the fungal transcription factor Ace2.","definition_xrefs":["PMID:16678171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ace2_UAS","synonyms":[{"name":"Ace2 upstream activating sequence","type":"exact"}],"termid":"SO:0001857"}


id: PBO:0044713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX11 antisense RNA 1","termid":"PBO:0044713"}


id: GO:0042925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) from one side of a membrane to the other.","definition_xrefs":["ISBN:0721662544","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"benzoate transmembrane transporter activity","synonyms":[{"name":"benzoate transporter activity","type":"related"}],"termid":"GO:0042925"}


id: MOD:00449
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:11857757","PubMed:11999733","PubMed:12175151","Unimod:56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetate labeling reagent (N-term) (heavy form, +3amu)","synonyms":[{"name":"Acetate labeling reagent (N-term & K) (heavy form, +3amu)","type":"related"},{"name":"Acetyl:2H(3)","type":"related"}],"termid":"MOD:00449"}


id: PBO:0053539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 543","termid":"PBO:0053539"}


id: MONDO:0004872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilated veins in the anal canal.","definition_xrefs":["NCIT:C26792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pelvic varices","termid":"MONDO:0004869"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemorrhoid","secondary_identifiers":["SCTID:70153002","EFO:0009552","ICD9:455","MEDGEN:5507","ICD9:455.8","MESH:D006484","DOID:9746","UMLS:C0019112"],"synonyms":[{"name":"Haemorrhoids","type":"exact"},{"name":"Hemorrhoids","type":"exact"},{"name":"hemorrhoid","type":"exact"},{"name":"hemorrhoidal disease","type":"exact"}],"termid":"MONDO:0004872","xrefs":{"Monarch":{"xref_id":"0004872"}}}


id: GO:0004823
data:
  {"annotated_genes":["SJAG_02015","SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94243,97283],"is_not":false,"summary":null,"term":"GO:0004823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H+ + Leu-tRNA(Leu).","definition_xrefs":["RHEA:11688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02015":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"leucine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03657","Reactome:R-HSA-380200","MetaCyc:LEUCINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379974","EC:6.1.1.4"],"synonyms":[{"name":"leucine translase activity","type":"related"},{"name":"leucine-tRNA synthetase activity","type":"related"},{"name":"leucine:tRNALeu ligase (AMP-forming)","type":"related"},{"name":"leucyl-tRNA synthetase activity","type":"exact"},{"name":"leucyl-transfer RNA synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004823","terms_by_termid":{"GO:0004823":null}}


id: GO:0019218
data:
  {"annotated_genes":["SJAG_02104","SJAG_04018","SJAG_01307","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[109003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[109004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[105002,87774,87775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of steroid metabolism","type":"exact"}],"termid":"GO:0019218","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PR:O74335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17F3.01c","synonyms":[{"name":"Spom972h-rga5","type":"exact"}],"termid":"PR:O74335"}


id: GO:0008389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coumarin + O2 + NADPH + H+ = hydroxycoumarin + H2O + NADP+.","definition_xrefs":["PMID:2733794","PMID:10490589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coumarin 7-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-76453","Reactome:R-HSA-211881"],"synonyms":[{"name":"cytochrome P450 CYP2A5","type":"narrow"}],"termid":"GO:0008389"}


id: PBO:0068610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 61, pseudogene","termid":"PBO:0068610"}


id: PBO:0076313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNJ2BP-COX16 readthrough","termid":"PBO:0076313"}


id: PBO:0091155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4","termid":"PBO:0091155"}


id: MONDO:0011750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete insulinoma tumor suppressor gene locus (obsolete MONDO:0011750)","secondary_identifiers":["OMIM:606960"],"synonyms":[{"name":"insulinoma tumor suppressor gene locus","type":"exact"}],"termid":"MONDO:0011750","xrefs":{"Monarch":{"xref_id":"0011750"}}}


id: GO:0052848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,5-bisdiphospho-1D-myo-inositol 2,3,4,6-tetrakisphosphate + H2O = 3-diphospho-1D-myo-inositol 1,2,4,5,6-pentakisphosphate + phosphate + 2 H+.","definition_xrefs":["RHEA:56312","PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","termid":"GO:0052841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity","secondary_identifiers":["MetaCyc:RXN-10976"],"termid":"GO:0052848"}


id: FYPO:0004640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CAAX-protein geranylgeranyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal CAAX-protein geranylgeranyltransferase activity","termid":"FYPO:0004640"}


id: PBO:0085202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein required for chromosome stability; involved in new kinetochore assembly and sister chromatid cohesion; forms a stable complex with Iml3p; peripheral component of the Ctf19 kinetochore complex that interacts with Ctf19p, Ctf3p, and Mif2p; required for the spindle assembly checkpoint; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-N and fission yeast mis15","termid":"PBO:0085202"}


id: GO:0051635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a bacterial cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial cell surface binding (obsolete GO:0051635)","synonyms":[{"name":"bacterial binding","type":"exact"},{"name":"bacterial cell surface binding","type":"exact"},{"name":"bacterium binding","type":"exact"},{"name":"bacterium cell surface binding","type":"exact"},{"name":"binding to bacterium","type":"exact"}],"termid":"GO:0051635"}


id: PBO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIG4 syndrome","termid":"PBO:0005211"}


id: PBO:0056220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member C3","termid":"PBO:0056220"}


id: MONDO:0005391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that occurs while resting or lying in bed; it is characterized by an irresistible urgency to move the legs to obtain relief from a strange and uncomfortable sensation in the legs.","definition_xrefs":["NCIT:C84501"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome","secondary_identifiers":["ICD9:333.99","icd11.foundation:1254916765","ICD9:333.94","MEDGEN:48427","EFO:0004270","SCTID:32914008","MESH:D012148","DOID:0050425","ICD10CM:G25.81","UMLS:C0035258"],"synonyms":[{"name":"RLS","type":"broad"},{"name":"WED","type":"broad"},{"name":"Willis-Ekbom disease","type":"exact"},{"name":"Wittmaack-Ekbom syndrome","type":"exact"},{"name":"restless leg syndrome","type":"exact"}],"termid":"MONDO:0005391","xrefs":{"Monarch":{"xref_id":"0005391"}}}


id: PBO:0061474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal cell adhesion molecule","termid":"PBO:0061474"}


id: PBO:0048315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 26","termid":"PBO:0048315"}


id: GO:1902186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of viral release from host cell.","definition_xrefs":["GOC:TermGenie","PMID:18305167"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of viral release from host cell (obsolete GO:1902186)","synonyms":[{"name":"regulation of release of virus from host","type":"exact"},{"name":"regulation of viral exit","type":"exact"},{"name":"regulation of viral release","type":"exact"},{"name":"regulation of viral shedding","type":"exact"}],"termid":"GO:1902186"}


id: PBO:0005592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific protein kinase Mug27/Slk1","termid":"PBO:0005592"}


id: GO:0061819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of small fragments of circular extrachromosomal DNA elements which contain telomeric DNA. It is speculated that telomeric DNA-containing double minutes are formed through a recombination event between the telomere and chromosome-internal TTAGGG-like sequences. Telomeric DNA-containing double minutes appear as two closely positioned dots in metaphase.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:2397458","GOC:BHF_telomere","PMID:14690602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"telomeric DNA-containing double minutes formation","synonyms":[{"name":"TDMs formation","type":"exact"}],"termid":"GO:0061819"}


id: MONDO:1011773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative suspensory ligament desmitis, non-human animal","secondary_identifiers":["OMIA:002086"],"termid":"MONDO:1011773","xrefs":{"Monarch":{"xref_id":"1011773"}}}


id: PBO:0030858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_calcium_level_during_cellular_response_to_salt_stress","termid":"PBO:0030858"}


id: PBO:0056915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY lysine 48 deubiquitinase 1","termid":"PBO:0056915"}


id: PBO:0079020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 3-1","termid":"PBO:0079020"}


id: PBO:0075224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 2 pseudogene 1","termid":"PBO:0075224"}


id: GO:1900975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tatiopterin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of tatiopterin biosynthetic process","termid":"GO:1900974"},{"relation_name":"is_a","term_name":"negative regulation of tatiopterin metabolic process","termid":"GO:1900978"},{"relation_name":"negatively_regulates","term_name":"tatiopterin biosynthetic process","termid":"GO:1900870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042559"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0042559"],"is_obsolete":false,"name":"negative regulation of tatiopterin biosynthetic process","synonyms":[{"name":"down regulation of tatiopterin anabolism","type":"exact"},{"name":"down regulation of tatiopterin biosynthesis","type":"exact"},{"name":"down regulation of tatiopterin biosynthetic process","type":"exact"},{"name":"down regulation of tatiopterin formation","type":"exact"},{"name":"down regulation of tatiopterin synthesis","type":"exact"},{"name":"down-regulation of tatiopterin anabolism","type":"exact"},{"name":"down-regulation of tatiopterin biosynthesis","type":"exact"},{"name":"down-regulation of tatiopterin biosynthetic process","type":"exact"},{"name":"down-regulation of tatiopterin formation","type":"exact"},{"name":"down-regulation of tatiopterin synthesis","type":"exact"},{"name":"downregulation of tatiopterin anabolism","type":"exact"},{"name":"downregulation of tatiopterin biosynthesis","type":"exact"},{"name":"downregulation of tatiopterin biosynthetic process","type":"exact"},{"name":"downregulation of tatiopterin formation","type":"exact"},{"name":"downregulation of tatiopterin synthesis","type":"exact"},{"name":"inhibition of tatiopterin anabolism","type":"exact"},{"name":"inhibition of tatiopterin biosynthesis","type":"exact"},{"name":"inhibition of tatiopterin biosynthetic process","type":"narrow"},{"name":"inhibition of tatiopterin formation","type":"exact"},{"name":"inhibition of tatiopterin synthesis","type":"exact"},{"name":"negative regulation of tatiopterin anabolism","type":"exact"},{"name":"negative regulation of tatiopterin biosynthesis","type":"exact"},{"name":"negative regulation of tatiopterin formation","type":"exact"},{"name":"negative regulation of tatiopterin synthesis","type":"exact"}],"termid":"GO:1900975"}


id: PBO:0005809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein Mog1","termid":"PBO:0005809"}


id: GO:2000356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"}


id: FYPO:0007595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mitophagy","termid":"FYPO:0000501"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased mitophagy during nitrogen starvation","synonyms":[{"name":"increased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"increased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"increased autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007595"}


id: GO:0019864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of an IgG isotype.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IgG binding","termid":"GO:0019864"}


id: GO:0061320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a pericardial nephrocyte. A pericardial nephrocyte is an insect renal cell that filters hemolymph and is found with other pericardial nephrocytes in two rows flanking the dorsal vessel. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["PMID:19783135","CL:0000474","GOC:dph","GOC:mtg_kidney_jan10","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericardial nephrocyte differentiation","secondary_identifiers":["GO:0007513"],"synonyms":[{"name":"pericardial cell differentiation","type":"narrow"}],"termid":"GO:0061320"}


id: GO:0150048
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a granule cell fiber onto the dendrites of a Purkinje cell in cerebellum.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:12427822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar granule cell to Purkinje cell synapse","synonyms":[{"name":"cerebellar parallel fiber to Purkinje cell synapse","type":"exact"}],"termid":"GO:0150048"}


id: FYPO:0008176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere inner repeat region are present at greater levels than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased centromeric inner repeat transcript level","termid":"FYPO:0008176"}


id: PBO:0091588
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 7.9x10^3 min-1 M-1","termid":"PBO:0091588"}


id: PBO:0057655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1247","termid":"PBO:0057655"}


id: GO:1902042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.","definition_xrefs":["PMID:17245429","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"is_a","term_name":"negative regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001237"},{"relation_name":"negatively_regulates","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of extrinsic apoptotic signaling pathway via death domain receptors","synonyms":[{"name":"down regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"down regulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"down-regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"down-regulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"downregulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"downregulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"inhibition of death receptor-mediated apoptosis","type":"narrow"},{"name":"inhibition of extrinsic apoptotic signaling pathway via death domain receptors","type":"narrow"},{"name":"negative regulation of death receptor-mediated apoptosis","type":"narrow"}],"termid":"GO:1902042"}


id: PBO:0003501
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.6","termid":"PBO:0003501"}


id: MONDO:1012915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis that occurs in Rhesus monkey due to a mutation in the TARDBP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322"},{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis, non-human animal","termid":"MONDO:1012954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, TARDBP-related, Rhesus monkey","secondary_identifiers":["OMIA:002492-9544"],"termid":"MONDO:1012915","xrefs":{"Monarch":{"xref_id":"1012915"}}}


id: PBO:0060600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit G2","termid":"PBO:0060600"}


id: PBO:0052058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0052058"}


id: FYPO:0007481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an increase in the transcription of one or more target genes that would normally occur when cells are subjected to a stress in the presence of a specific small molecule occurs to a lower extent than normal under the same circumstances.","definition_xrefs":["PMID:31932483","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule","synonyms":[{"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule during mitotic cell cycle","type":"related"},{"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule during vegetative growth","type":"exact"}],"termid":"FYPO:0007481"}


id: PBO:0005852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated protein Pal1","termid":"PBO:0005852"}


id: PBO:0041340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 putative open reading frame 36","termid":"PBO:0041340"}


id: MONDO:0010155
data:
  {"annotated_genes":["SJAG_04323"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84236],"is_not":false,"summary":null,"term":"MONDO:0010155"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal ichthyosis syndrome (obsolete MONDO:0017270)","termid":"MONDO:0017270"},{"relation_name":"is_a","term_name":"neutral lipid storage disease","termid":"MONDO:0015611"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"Dorfman-Chanarin disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3979","NANDO:2200997","NORD:1283","NANDO:1200623","icd11.foundation:690728790","MEDGEN:82780","NANDO:1200622","Orphanet:98907","OMIM:275630","SCTID:19604005","UMLS:C0268238"],"synonyms":[{"name":"CDS","type":"related"},{"name":"Chanarin-Dorfman Syndrome","type":"exact"},{"name":"Chanarin-Dorfman disease","type":"related"},{"name":"Chanarin-Dorfman syndrome","type":"exact"},{"name":"DCs","type":"related"},{"name":"Dorfman Chanarin syndrome","type":"related"},{"name":"Dorfman-Chanarin syndrome","type":"related"},{"name":"NLSDI","type":"exact"},{"name":"disorder of cornification 12 (neutral lipid storage type)","type":"related"},{"name":"ichthyosiform erythroderma with leukocyte vacuolation","type":"related"},{"name":"ichthyotic neutral Lipid storage disease","type":"related"},{"name":"neutral Lipid storage disease with ichthyosis","type":"related"},{"name":"neutral lipid storage disease with ichthyosis","type":"exact"},{"name":"neutral lipid storage disease with ichthyotic","type":"related"},{"name":"triglyceride storage disease with impaired long-chain fatty acid oxidation","type":"related"}],"termid":"MONDO:0010155","terms_by_termid":{"MONDO:0010155":null},"xrefs":{"Monarch":{"xref_id":"0010155"}}}


id: PBO:0059146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase specific PLK1 interacting protein","termid":"PBO:0059146"}


id: GO:1903648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chlorophyll catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24719469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll catabolic process","termid":"GO:0010271"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole catabolic process","termid":"GO:1901406"},{"relation_name":"positively_regulates","term_name":"chlorophyll catabolic process","termid":"GO:0015996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chlorophyll catabolic process","synonyms":[{"name":"activation of chlorophyll breakdown","type":"narrow"},{"name":"activation of chlorophyll catabolic process","type":"narrow"},{"name":"activation of chlorophyll catabolism","type":"narrow"},{"name":"activation of chlorophyll degradation","type":"narrow"},{"name":"positive regulation of chlorophyll breakdown","type":"exact"},{"name":"positive regulation of chlorophyll catabolism","type":"exact"},{"name":"positive regulation of chlorophyll degradation","type":"exact"},{"name":"up regulation of chlorophyll breakdown","type":"exact"},{"name":"up regulation of chlorophyll catabolic process","type":"exact"},{"name":"up regulation of chlorophyll catabolism","type":"exact"},{"name":"up regulation of chlorophyll degradation","type":"exact"},{"name":"up-regulation of chlorophyll breakdown","type":"exact"},{"name":"up-regulation of chlorophyll catabolic process","type":"exact"},{"name":"up-regulation of chlorophyll catabolism","type":"exact"},{"name":"up-regulation of chlorophyll degradation","type":"exact"},{"name":"upregulation of chlorophyll breakdown","type":"exact"},{"name":"upregulation of chlorophyll catabolic process","type":"exact"},{"name":"upregulation of chlorophyll catabolism","type":"exact"},{"name":"upregulation of chlorophyll degradation","type":"exact"}],"termid":"GO:1903648"}


id: PBO:0081392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 232","termid":"PBO:0081392"}


id: GO:0071269
data:
  {"annotated_genes":["SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109650],"is_not":false,"summary":null,"term":"GO:0071269"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-homocysteine, the L-enantiomer of 2-amino-4-sulfanylbutanoic acid.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid biosynthetic process","termid":"GO:0009070"},{"relation_name":"is_a","term_name":"homocysteine biosynthetic process","termid":"GO:0071268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-homocysteine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-homocysteine anabolism","type":"exact"},{"name":"L-homocysteine biosynthesis","type":"exact"},{"name":"L-homocysteine formation","type":"exact"},{"name":"L-homocysteine synthesis","type":"exact"}],"termid":"GO:0071269","terms_by_termid":{"GO:0071269":null}}


id: GO:0070322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating deprivation of nitrogen.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of translation in response to nitrogen starvation (obsolete GO:0070322)","synonyms":[{"name":"down regulation of translation in response to nitrogen starvation","type":"exact"},{"name":"down-regulation of translation in response to nitrogen starvation","type":"exact"},{"name":"downregulation of translation in response to nitrogen starvation","type":"exact"},{"name":"inhibition of translation in response to nitrogen starvation","type":"narrow"}],"termid":"GO:0070322"}


id: PATO:0000969
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being abnormally small.","definition_xrefs":["Answers.com:Answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarf-like","synonyms":[{"name":"dwarfed","type":"exact"}],"termid":"PATO:0000969"}


id: MOD:00633
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"bis-N-I-sulfonerahodamine","synonyms":[{"name":"Xlink:B10621","type":"related"},{"name":"bis-((N-iodoacetyl)piperazinyl)sulfonerhodamine","type":"exact"},{"name":"bis-N-I-sulfonerahodamine","type":"related"}],"termid":"MOD:00633"}


id: PBO:0055019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2434","termid":"PBO:0055019"}


id: GO:0006421
data:
  {"annotated_genes":["SJAG_04856","SJAG_02517"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101451,104234],"is_not":false,"summary":null,"term":"GO:0006421"}]},"cv_name":"biological_process","definition":"The process of coupling asparagine to asparaginyl-tRNA, catalyzed by asparaginyl-tRNA synthetase. The asparaginyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an asparagine-accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02517":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"asparaginyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006421","terms_by_termid":{"GO:0006421":null}}


id: PBO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Isp3","termid":"PBO:0016883"}


id: GO:0098881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The exocytic fusion of neurotransmitter receptor-containing vesicles with plasma membrane, resulting in the integration of neurotransmitter receptors into the plasma membrane. This process includes tethering and docking steps that prepare vesicles for fusion.","definition_xrefs":["PMID:19503082","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"is_a","term_name":"vesicle tethering involved in exocytosis","termid":"GO:0090522"},{"relation_name":"part_of","term_name":"neurotransmitter receptor transport to plasma membrane","termid":"GO:0098877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0140056","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"exocytic insertion of neurotransmitter receptor to plasma membrane","synonyms":[{"name":"neurotransmitter receptor insertion","type":"exact"}],"termid":"GO:0098881"}


id: MONDO:0859206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hearing loss and spasticity","secondary_identifiers":["OMIM:619616","MEDGEN:1794234","Orphanet:659975","UMLS:C5562024"],"termid":"MONDO:0859206","xrefs":{"Monarch":{"xref_id":"0859206"}}}


id: GO:0098564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the membrane of a trans-Golgi network transport vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi lumen","termid":"GO:0005796"},{"relation_name":"is_a","term_name":"transport vesicle lumen","termid":"GO:0098566"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle","termid":"GO:0030140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005794","GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"trans-Golgi network transport vesicle lumen","termid":"GO:0098564"}


id: PATO:0001163
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration which is lower relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"concentrated","termid":"PATO:0001159"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased concentration","synonyms":[{"name":"low concentration","type":"exact"}],"termid":"PATO:0001163"}


id: PBO:0048438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 1 pseudogene 1","termid":"PBO:0048438"}


id: PBO:0078605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 18","termid":"PBO:0078605"}


id: PBO:0086477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086477"}


id: GO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits of the regulatory particle that directly associate with the core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle, base subcomplex (obsolete GO:0031611)","termid":"GO:0031611"}


id: MONDO:0020447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary sinus atresia","secondary_identifiers":["Orphanet:99118","UMLS:C0344683","MEDGEN:576419","GARD:19659"],"termid":"MONDO:0020447","xrefs":{"Monarch":{"xref_id":"0020447"}}}


id: PBO:0076895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 49","termid":"PBO:0076895"}


id: PBO:0062402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 25 pseudogene","termid":"PBO:0062402"}


id: PBO:0042174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 4","termid":"PBO:0042174"}


id: GO:1904215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein import into chloroplast stroma.","definition_xrefs":["PMID:25901327","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"protein import into chloroplast stroma","termid":"GO:0045037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein import into chloroplast stroma","synonyms":[{"name":"regulation of chloroplast stroma protein import","type":"exact"},{"name":"regulation of protein transport into chloroplast stroma","type":"exact"}],"termid":"GO:1904215"}


id: PBO:0074476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-strand-selective monofunctional uracil-DNA glycosylase 1","termid":"PBO:0074476"}


id: FYECO:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which adenine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited adenine","secondary_identifiers":["PMID:7565608"],"termid":"FYECO:0000021"}


id: PBO:0059939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 25","termid":"PBO:0059939"}


id: PATO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased occurrence","synonyms":[{"name":"decreased incidence","type":"exact"}],"termid":"PATO:0002052"}


id: PBO:0053156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase D","termid":"PBO:0053156"}


id: MONDO:0012308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of Joubert syndrome and related disorders (JSRD) characterized by the neurological features of JS associated with renal disease, in the absence of retinopathy.","definition_xrefs":["Orphanet:220497"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"excluded_subClassOf","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome with renal defect","secondary_identifiers":["icd11.foundation:1419767028","MESH:C536296","OMIM:609583","DOID:0110999","NCIT:C74997","SCTID:716999001","UMLS:C1846790","GARD:10169","MEDGEN:335526"],"synonyms":[{"name":"JBTS4","type":"exact"},{"name":"JS-R","type":"exact"},{"name":"Joubert syndrome 4","type":"related"},{"name":"Joubert syndrome type 4","type":"exact"},{"name":"Joubert syndrome with renal anomalies","type":"related"}],"termid":"MONDO:0012308","xrefs":{"Monarch":{"xref_id":"0012308"}}}


id: PBO:0074561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 15","termid":"PBO:0074561"}


id: MONDO:0009150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypohidrotic ectodermal dysplasia-hypothyroidism-ciliary dyskinesia syndrome is characterized by alopecia, nail dystrophy, ophthalmic complications, thyroid dysfunction (primary hypothyroidism), hypohidrosis, ephelides, enteropathy, and respiratory tract infections due to ciliary dyskinesia, leading to suggestion of the acronym ANother syndrome as alternative name for this condition. It has been described in three patients (two brothers and an unrelated girl). Transmission is autosomal recessive.","definition_xrefs":["Orphanet:1882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypohidrotic ectodermal dysplasia-hypothyroidism-ciliary dyskinesia syndrome","secondary_identifiers":["UMLS:C1857052","OMIM:225050","SCTID:239050000","MESH:C565604","MEDGEN:384046","GARD:2049"],"synonyms":[{"name":"HEDH syndrome","type":"exact"},{"name":"another syndrome","type":"exact"},{"name":"ectodermal dysplasia hypohidrotic with hypothyroidism and ciliary dyskinesia","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, with hypothyroidism and ciliary dyskinesia","type":"related"},{"name":"hypohidrotic ectodermal dysplasia - hypothyroidism - ciliary dyskinesia","type":"related"},{"name":"hypohidrotic ectodermal dysplasia with hypothyroidism","type":"related"},{"name":"hypohidrotic ectodermal dysplasia with hypothyroidism and ciliary dyskinesia","type":"related"}],"termid":"MONDO:0009150","xrefs":{"Monarch":{"xref_id":"0009150"}}}


id: GO:0034439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"},{"relation_name":"is_a","term_name":"lipoprotein oxidation","termid":"GO:0042161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoprotein lipid oxidation","termid":"GO:0034439"}


id: PBO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YKR075C has a paralog, YOR062C, that arose from the whole genome duplication","termid":"PBO:0086003"}


id: PBO:0040278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antioxidant 1 copper chaperone","termid":"PBO:0040278"}


id: PBO:0082786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; constitutes the core element of the protein conducting pore; pre-Tom40p is phosphorylated by PKA, which impairs its import into mitochondria under non-respiratory conditions","termid":"PBO:0082786"}


id: FYPO:0005310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"},{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005310"}


id: GO:0046785
data:
  {"annotated_genes":["SJAG_02609","SJAG_02886","SJAG_03540","SJAG_01215","SJAG_02737","SJAG_01756","SJAG_02624","SJAG_02761","SJAG_07018","SJAG_03835","SJAG_00856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117274],"is_not":false,"summary":null,"term":"GO:0046785"},{"annotations":[116074],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[108003,108762,109726],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[99270,99569,100173,116320,105607,116079],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[100174,117788],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The addition of tubulin heterodimers to one or both ends of a microtubule.","definition_xrefs":["GOC:ai","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0000226","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"microtubule polymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule assembly","type":"exact"},{"name":"microtubule formation","type":"related"}],"termid":"GO:0046785","terms_by_termid":{"GO:0007020":null,"GO:0030954":null,"GO:0046785":null,"GO:0051415":null,"GO:0051417":null}}


id: PBO:0062776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 4","termid":"PBO:0062776"}


id: PBO:0065279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2C","termid":"PBO:0065279"}


id: GO:0032972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the velocity of muscle filament sliding.","definition_xrefs":["GOC:dph","GOC:ecd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding","termid":"GO:0032971"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of muscle filament sliding speed","termid":"GO:0032972"}


id: FYPO:0006724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which movement of a protein away from Cdr2 medial cortical node complexes during a cellular response to osmotic stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress","synonyms":[{"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0006724"}


id: PBO:0043146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 14","termid":"PBO:0043146"}


id: PBO:0047357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 12","termid":"PBO:0047357"}


id: GO:0071643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 4.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 4 production","termid":"GO:0071606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"regulation of CCL4 production","type":"exact"},{"name":"regulation of MIP-1b production","type":"exact"},{"name":"regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071643"}


id: PBO:0059301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49","termid":"PBO:0059301"}


id: PBO:0047093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member E","termid":"PBO:0047093"}


id: MONDO:0100233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disease triggered by acute COVID-19 infection that is characterized by persistent symptoms following the acute phase of the SARS-CoV-2 infection, which may include fatigue, coughing, dyspnea, clouding of mentation, sleep disturbances, exercise intolerance and autonomic symptoms including tachycardia upon mild exercise or standing, night sweats, temperature dysregulation, gastroparesis, constipation or loose stools, and peripheral vasoconstriction.","definition_xrefs":["PMID:32644129","PMID:32788251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-COVID-19 disorder","termid":"MONDO:0100320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long COVID-19","secondary_identifiers":["MESH:D000094024","NCIT:C179263","UMLS:C5433293","MedDRA:10085503","MedDRA:10085504","MEDGEN:1735839","DOID:0080848"],"synonyms":[{"name":"PASC","type":"exact"},{"name":"long haul COVID-19","type":"exact"},{"name":"long-haul COVID-19","type":"exact"},{"name":"post-acute sequelae of COVID-19","type":"exact"},{"name":"post-acute sequelae of SARS-CoV-2 infection","type":"exact"},{"name":"sequelae of COVID-19","type":"exact"}],"termid":"MONDO:0100233","xrefs":{"Monarch":{"xref_id":"0100233"}}}


id: GO:0070086
data:
  {"annotated_genes":["SJAG_02789","SJAG_03404","SJAG_04051","SJAG_00032","SJAG_00803","SJAG_03643","SJAG_01686","SJAG_04466"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91409,95487,104878,107216,110168,111448,116654,117990],"is_not":false,"summary":null,"term":"GO:0070086"}]},"cv_name":"biological_process","definition":"Endocytosis of a protein that requires the substrate to be modified by ubiquitination. Several plasma membrane proteins, including cell surface permeases and some receptors, are targeted for internalization by endocytosis, and are thereafter delivered to the vacuole or lysosome, where they are degraded.","definition_xrefs":["PMID:9409540","GOC:jp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00803":null,"SJAG_01686":null,"SJAG_02789":null,"SJAG_03404":null,"SJAG_03643":null,"SJAG_04051":null,"SJAG_04466":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-dependent endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin-mediated endocytosis","type":"exact"}],"termid":"GO:0070086","terms_by_termid":{"GO:0070086":null}}


id: MONDO:0008769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition associated with mutation(s) in the TPP1 gene, encoding tripeptidyl-peptidase- 1. The condition is one of a group of genetically heterogeneous neurodegenerative disorders, characterized by accumulation of intracellular lipopigments.","definition_xrefs":["NCIT:C85864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late infantile neuronal ceroid lipofuscinosis","termid":"MONDO:0015674"},{"relation_name":"is_a","term_name":"juvenile neuronal ceroid lipofuscinosis","termid":"MONDO:0019262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002039","MONDO:0005559","MONDO:0002525"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 2","secondary_identifiers":["GARD:3045","Orphanet:228349","UMLS:C1876161","OMIM:204500","MEDGEN:406281","NANDO:1200153","NANDO:2201242","DOID:0110726"],"synonyms":[{"name":"CLN2","type":"exact"},{"name":"CLN2 disease","type":"related"},{"name":"CLN2 disease, juvenile (subtype)","type":"related"},{"name":"CLN2 disease, late infantile (subtype)","type":"related"},{"name":"Jansky-Bielschowsky disease","type":"related"},{"name":"TPP1 neuronal ceroid lipofuscinosis","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 2","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, 2, variable Age at onset","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 2","type":"exact"},{"name":"late infantile neuronal ceroid lipofuscinosis","type":"broad"},{"name":"neuronal ceroid lipofuscinosis 2 variable age at onset","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in TPP1","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 2","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, late infantile","type":"related"}],"termid":"MONDO:0008769","xrefs":{"Monarch":{"xref_id":"0008769"}}}


id: GO:0051884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of timing of anagen, the growth phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"regulates","term_name":"anagen","termid":"GO:0042640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of anagen","synonyms":[{"name":"regulation of anagen","type":"related"}],"termid":"GO:0051884"}


id: PBO:0077962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 15-1","termid":"PBO:0077962"}


id: GO:0021784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the postganglionic portion of the parasympathetic fiber over time, from its formation to the mature structure. The parasympathetic fiber is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system development","termid":"GO:0048483"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"},{"relation_name":"part_of","term_name":"parasympathetic nervous system development","termid":"GO:0048486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postganglionic parasympathetic fiber development","termid":"GO:0021784"}


id: PBO:0067046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 66, pseudogene","termid":"PBO:0067046"}


id: MOD:01333
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 6x(13)C labeled L-isoleucine.","definition_xrefs":["PubMed:12766232","Unimod:188#I","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-isoleucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01333"}


id: GO:0032605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of hepatocyte growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:1838014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"},{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"hepatocyte growth factor production","secondary_identifiers":["GO:0048175"],"synonyms":[{"name":"HGF production","type":"exact"},{"name":"hepatocyte growth factor biosynthetic process","type":"narrow"},{"name":"scatter factor production","type":"exact"}],"termid":"GO:0032605"}


id: PBO:0029374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029374"}


id: PBO:0058836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8066","termid":"PBO:0058836"}


id: MONDO:0011489
data:
  {"annotated_genes":["SJAG_01848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84931],"is_not":false,"summary":null,"term":"MONDO:0011489"}]},"cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 12 is a pure form of hereditary spastic paraplegia characterized by a childhood- to adulthood-onset of slowly progressive lower limb spasticity and hyperreflexia of lower extremities, extensor plantar reflexes, distal sensory impairment, variable urinary dysfunction and pes cavus.","definition_xrefs":["Orphanet:100993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:604805","SCTID:763374004","MESH:C537484","UMLS:C1858106","GARD:9586","DOID:0110765","MEDGEN:347618"],"synonyms":[{"name":"RTN2 hereditary spastic paraplegia","type":"exact"},{"name":"SPG12","type":"exact"},{"name":"autosomal dominant spastic paraplegia 12","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 12","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in RTN2","type":"exact"},{"name":"hereditary spastic paraplegia type 12","type":"exact"},{"name":"spastic paraplegia 12","type":"related"},{"name":"spastic paraplegia 12, autosomal dominant","type":"related"}],"termid":"MONDO:0011489","terms_by_termid":{"MONDO:0011489":null},"xrefs":{"Monarch":{"xref_id":"0011489"}}}


id: GO:0140706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein-containing complex localization by which the complex is transported to, or maintained in, the centriolar satellite.","definition_xrefs":["PMID:27979967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein-containing complex localization to centriolar satellite","termid":"GO:0140706"}


id: GO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the second transesterification reaction of U12-type spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure. The catalytic site is thought to be formed by U6 and/or U2 snRNAs and/or associated proteins.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete second U12-type spliceosomal transesterification activity (obsolete GO:0000367)","synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"},{"name":"second U12-type spliceosomal transesterification activity","type":"exact"}],"termid":"GO:0000367"}


id: PBO:0076209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 19","termid":"PBO:0076209"}


id: MONDO:0859215
data:
  {"annotated_genes":["SJAG_MIT09"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85317],"is_not":false,"summary":null,"term":"MONDO:0859215"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_MIT09":null},"genotype_count":0,"is_obsolete":false,"name":"dystonia, early-onset, and/or spastic paraplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794261","OMIM:619681","UMLS:C5562051","DOID:0070445"],"termid":"MONDO:0859215","terms_by_termid":{"MONDO:0859215":null},"xrefs":{"Monarch":{"xref_id":"0859215"}}}


id: PBO:0075631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2A","termid":"PBO:0075631"}


id: MONDO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chordoid glioma (obsolete MONDO:0002774)","termid":"MONDO:0002774","xrefs":{"Monarch":{"xref_id":"0002774"}}}


id: RO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"develops_from","termid":"RO:0002202"}


id: GO:0060048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Muscle contraction of cardiac muscle tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"heart contraction","termid":"GO:0060047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle contraction","synonyms":[{"name":"heart muscle contraction","type":"exact"}],"termid":"GO:0060048"}


id: PBO:0000737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haspin related kinase Hrk1","termid":"PBO:0000737"}


id: GO:0140024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endosome towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of an endosome to a microtubule, and ends when the endosome reaches its final destination.","definition_xrefs":["PMID:24803650","PMID:25706234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plus-end-directed vesicle transport along microtubule","termid":"GO:0072383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"plus-end-directed endosome transport along mitotic spindle midzone microtubule","termid":"GO:0140024"}


id: GO:0032970
data:
  {"annotated_genes":["SJAG_02392","SJAG_01821","SJAG_03486","SJAG_02700","SJAG_00610","SJAG_00521","SJAG_02684","SJAG_04666","SJAG_01993","SJAG_03655","SJAG_00424","SJAG_02592","SJAG_04522","SJAG_01826","SJAG_03048","SJAG_02795","SJAG_01774","SJAG_04100","SJAG_01805","SJAG_04597","SJAG_00082","SJAG_02366","SJAG_02566","SJAG_03086","SJAG_01320","SJAG_01894","SJAG_05000","SJAG_04479","SJAG_03455","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113451,87468,91527,98093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[90082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[97477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[101550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[89203,93610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[114481,115622,91906,91623,98639,109254,93615,95053,102025,105842,93041,88941,88646,114453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032956"},{"annotations":[106772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[89034,89886,101924,100934,104329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[118658,93576,93005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the actin cytoskeleton.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"actin filament-based process","termid":"GO:0030029"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00279":null,"SJAG_00424":null,"SJAG_00521":null,"SJAG_00610":null,"SJAG_01320":null,"SJAG_01774":null,"SJAG_01805":null,"SJAG_01821":null,"SJAG_01826":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02366":null,"SJAG_02392":null,"SJAG_02566":null,"SJAG_02592":null,"SJAG_02684":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_03486":null,"SJAG_03655":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament-based process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32915139":null},"termid":"GO:0032970","terms_by_termid":{"GO:0030833":null,"GO:0032231":null,"GO:0032956":null,"GO:0034316":null,"GO:0051016":null,"GO:0120306":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: PBO:0005353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P K-RNA","termid":"PBO:0005353"}


id: MONDO:0025086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary disease of the hip joints in dogs. Signs of the disease may be evident any time after 4 weeks of age.","definition_xrefs":["MESH:D006619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dog disease","termid":"MONDO:0024919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hip dysplasia, canine","synonyms":[{"name":"canine hip dysplasia","type":"related"},{"name":"dysplasia, canine hip","type":"related"}],"termid":"MONDO:0025086","xrefs":{"Monarch":{"xref_id":"0025086"}}}


id: PBO:0078236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 18","termid":"PBO:0078236"}


id: PBO:0059164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucosal pentraxin 1 (pseudogene)","termid":"PBO:0059164"}


id: MONDO:0958186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematuria, benign familial","termid":"MONDO:0957317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematuria, benign familial, 2","secondary_identifiers":["OMIM:620320","UMLS:C5830421","MEDGEN:1841057"],"termid":"MONDO:0958186","xrefs":{"Monarch":{"xref_id":"0958186"}}}


id: MONDO:0010396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the CDKL5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"atypical Rett syndrome","termid":"MONDO:0017746"},{"relation_name":"is_a","term_name":"West syndrome","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"CDKL5 disorder","termid":"MONDO:0100039"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 2","secondary_identifiers":["Orphanet:505652","DOID:0080467","MEDGEN:1663579","GARD:18617","MESH:C564064","OMIM:300672","UMLS:C4750718"],"synonyms":[{"name":"CDKL5 early infantile epileptic encephalopathy","type":"exact"},{"name":"DEE2","type":"exact"},{"name":"EIEE2","type":"exact"},{"name":"developmental and epileptic encephalopathy 2, X-linked dominant","type":"exact"},{"name":"developmental and epileptic encephalopathy, 2","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in CDKL5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 2","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 2","type":"exact"},{"name":"infantile spasm syndrome, X-linked 2","type":"related"}],"termid":"MONDO:0010396","xrefs":{"Monarch":{"xref_id":"0010396"}}}


id: PBO:0087217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-AdoMet-dependent methyltransferase involved in lipid homeostasis; mediates resistance to a drug cantharidin","termid":"PBO:0087217"}


id: PBO:0003450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA processing protein Esf1 (predicted)","termid":"PBO:0003450"}


id: MONDO:0005145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic amyotrophic lateral sclerosis is a amyotrophic lateral sclerosis in which there is no known cause, such as no family history.","definition_xrefs":["EFO:0001357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis","termid":"MONDO:0004976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"sporadic amyotrophic lateral sclerosis","secondary_identifiers":["UMLS:C1862941","DOID:0080917","MEDGEN:400171"],"termid":"MONDO:0005145","xrefs":{"Monarch":{"xref_id":"0005145"}}}


id: PBO:0078320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 2","termid":"PBO:0078320"}


id: FYPO:0001057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal amino acid import","synonyms":[{"name":"abnormal amino acid import across plasma membrane","type":"exact"},{"name":"abnormal amino acid import into cell","type":"exact"},{"name":"abnormal amino acid uptake","type":"exact"}],"termid":"FYPO:0001057"}


id: GO:0035727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lysophosphatidic acid (LPA), a phospholipid derivative that acts as a potent mitogen due to its activation of high-affinity G protein-coupled receptors.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"lysophosphatidic acid binding","synonyms":[{"name":"LPA binding","type":"exact"}],"termid":"GO:0035727"}


id: PBO:0048989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC1 antisense RNA 1","termid":"PBO:0048989"}


id: MONDO:1012973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skeletal dysplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973","xrefs":{"Monarch":{"xref_id":"1012973"}}}


id: PBO:0064059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 93","termid":"PBO:0064059"}


id: PBO:0085614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex; forms a subcomplex with Mcm4p and Mcm7p","termid":"PBO:0085614"}


id: PBO:0039916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 16","termid":"PBO:0039916"}


id: PBO:0080189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor B","termid":"PBO:0080189"}


id: PBO:0042136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholecystokinin B receptor","termid":"PBO:0042136"}


id: MONDO:0025167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of pathologic syndromes found in avian species caused by reticuloendotheliosis virus. The distinct syndromes include non-neoplastic runting, acute neoplastic disease, and chronic neoplastic disease. Humans and mammals appear resistant.","definition_xrefs":["MESH:D055761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticuloendotheliosis, avian","synonyms":[{"name":"Avian Reticuloendothelioses","type":"related"},{"name":"Avian reticuloendotheliosis","type":"related"},{"name":"Reticuloendothelioses, Avian","type":"related"}],"termid":"MONDO:0025167","xrefs":{"Monarch":{"xref_id":"0025167"}}}


id: GO:0043498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface binding (obsolete GO:0043498)","synonyms":[{"name":"cell surface binding","type":"exact"}],"termid":"GO:0043498"}


id: FYPO:0007818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination","termid":"FYPO:0007946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein ubiquitination during nitrogen starvation","synonyms":[{"name":"decreased protein ubiquitination during nitrogen depletion","type":"exact"},{"name":"decreased protein ubiquitination during nitrogen deprivation","type":"exact"},{"name":"decreased protein ubiquitinylation during nitrogen starvation","type":"exact"},{"name":"decreased protein ubiquitylation during nitrogen starvation","type":"exact"},{"name":"reduced protein ubiquitination during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007818"}


id: FYPO:0005191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which a cellular response to stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular response to stress","termid":"FYPO:0005191"}


id: GO:0016122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"xanthophyll metabolic process","synonyms":[{"name":"xanthophyll metabolism","type":"exact"}],"termid":"GO:0016122"}


id: PATO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An 1-D extent quality which is equal to the length of the closed curve of a circle.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perimeter","termid":"PATO:0001711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circumference","termid":"PATO:0001648"}


id: MONDO:0008362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ragweed sensitivity","secondary_identifiers":["OMIM:179450","MEDGEN:356768","UMLS:C1867394","MESH:C566725"],"synonyms":[{"name":"ragweed sensitivity","type":"exact"}],"termid":"MONDO:0008362","xrefs":{"Monarch":{"xref_id":"0008362"}}}


id: PR:Q9P6M2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC688.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C688.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.03c","synonyms":[{"name":"Spom972h-SPAC688.03c","type":"exact"}],"termid":"PR:Q9P6M2"}


id: GO:0007275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).","definition_xrefs":["GOC:dph","GOC:ems","GOC:isa_complete","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organism development","termid":"GO:0007275"}


id: GO:1990963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the retina. The blood-retinal barrier is located at two levels, forming an outer barrier in the retinal pigment epithelium and an inner barrier in the endothelial membrane of the retinal vessels. Both these membranes have tight junctions of the 'nonleaky' type.","definition_xrefs":["PMID:25053619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-retinal barrier","synonyms":[{"name":"establishment of BRB","type":"related"},{"name":"establishment of blood-retina barrier","type":"exact"}],"termid":"GO:1990963"}


id: GO:0032649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon.","definition_xrefs":["PMID:15546383","GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type II interferon production","termid":"GO:0032609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of type II interferon production","secondary_identifiers":["GO:0045072","GO:1902713"],"synonyms":[{"name":"regulation of interferon-gamma biosynthetic process","type":"narrow"},{"name":"regulation of interferon-gamma production","type":"exact"},{"name":"regulation of interferon-gamma secretion","type":"narrow"}],"termid":"GO:0032649"}


id: MONDO:0002677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm composed of fibroblasts, and characterized by collagen production and usually a herringbone architectural pattern.","definition_xrefs":["NCIT:C9429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"conventional fibrosarcoma","secondary_identifiers":["DOID:3517","UMLS:C1333156","MEDGEN:232393"],"synonyms":[{"name":"classic fibrosarcoma","type":"exact"},{"name":"classical fibrosarcoma","type":"exact"},{"name":"conventional fibrosarcoma","type":"exact"}],"termid":"MONDO:0002677","xrefs":{"Monarch":{"xref_id":"0002677"}}}


id: PATO:0001795
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coiling which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coiled","termid":"PATO:0000404"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased coiling","synonyms":[{"name":"high coiling","type":"exact"}],"termid":"PATO:0001795"}


id: MONDO:0020063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation syndrome with hamartosis (obsolete MONDO:0020063)","secondary_identifiers":["Orphanet:98196"],"synonyms":[{"name":"Dysmorphologic diseases with phakomatosis","type":"exact"}],"termid":"MONDO:0020063","xrefs":{"Monarch":{"xref_id":"0020063"}}}


id: GO:0102320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,8-cineole + NADPH + H+ + O2 = 2-exo-hydroxy-1,8-cineole + NADP + H2O.","definition_xrefs":["GOC:pz","RHEA:32895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1,8-cineole 2-exo-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-4342","EC:1.14.14.56"],"termid":"GO:0102320"}


id: PBO:0026826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_DNA_strand_elongation_involved_in_mitotic_DNA_replication","termid":"PBO:0026826"}


id: PBO:0057974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689f","termid":"PBO:0057974"}


id: PBO:0039508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 28","termid":"PBO:0039508"}


id: PBO:0080409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37C subunit of ESCRT-I","termid":"PBO:0080409"}


id: MOD:01344
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical with MOD:00835. Remap to MOD:00835.","definition_xrefs":["PubMed:9252331","Unimod:401","PubMed:9276974"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01344 dehydrogenated residue - site S (obsolete MOD:01344)","synonyms":[{"name":"2-amino-3-oxo-butanoic_acid","type":"related"},{"name":"Didehydro","type":"related"}],"termid":"MOD:01344"}


id: PBO:0072098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 29","termid":"PBO:0072098"}


id: MONDO:0014538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital fibrosis of extraocular muscles in which the cause of the disease is a mutation in the COL25A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"fibrosis of extraocular muscles, congenital, 5","secondary_identifiers":["DOID:0081020","GARD:18164","OMIM:616219","MEDGEN:863989","UMLS:C4015552"],"synonyms":[{"name":"CFEOM5","type":"related"},{"name":"COL25A1 congenital fibrosis of extraocular muscles","type":"exact"},{"name":"congenital fibrosis of extraocular muscles caused by mutation in COL25A1","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 5","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, type 5","type":"exact"}],"termid":"MONDO:0014538","xrefs":{"Monarch":{"xref_id":"0014538"}}}


id: MONDO:0004041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign condition, characterized by a papillary growth in the urinary tract with a central fibrovascular core. The latter is lined by normal urothelium.","definition_xrefs":["NCIT:C3842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary urothelial neoplasm","termid":"MONDO:0003443"},{"relation_name":"is_a","term_name":"urinary tract non-invasive transitional cell neoplasm","termid":"MONDO:0003755"},{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"transitional cell papilloma","termid":"MONDO:0005605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urothelial papilloma","secondary_identifiers":["ICDO:8120/1","DOID:6933","MEDGEN:115999","ONCOTREE:UPA","UMLS:C0235754"],"synonyms":[{"name":"bladder papilloma","type":"exact"},{"name":"bladder transitional cell papilloma","type":"related"},{"name":"transitional cell papilloma of bladder","type":"exact"},{"name":"uPA","type":"related"},{"name":"urothelial papilloma","type":"exact"}],"termid":"MONDO:0004041","xrefs":{"Monarch":{"xref_id":"0004041"}}}


id: PBO:0040227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 3","termid":"PBO:0040227"}


id: PBO:0084655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor sphingoid long-chain base kinase; possibly involved in synthesis of long-chain base phosphates, which function as signaling molecules; LCB5 has a paralog, LCB4, that arose from the whole genome duplication","termid":"PBO:0084655"}


id: GO:0006901
data:
  {"annotated_genes":["SJAG_00906","SJAG_03268","SJAG_04615","SJAG_00284","SJAG_04391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94714],"is_not":false,"summary":null,"term":"GO:0006901"},{"annotations":[116871,92425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048205"},{"annotations":[107885,109266],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0003400"}]},"cv_name":"biological_process","definition":"A protein coat is added to the vesicle to form the proper shape of the vesicle and to target the vesicle for transport to its destination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"vesicle budding from membrane","termid":"GO:0006900"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00906":null,"SJAG_03268":null,"SJAG_04391":null,"SJAG_04615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"vesicle coating","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vesicle coat assembly","type":"broad"}],"termid":"GO:0006901","terms_by_termid":{"GO:0003400":null,"GO:0006901":null,"GO:0048205":null}}


id: PBO:0088316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved membrane protein with Rossmann-like alpha/beta/alpha sandwich fold, conserved in fungi and protozoa","termid":"PBO:0088316"}


id: PBO:0078000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 1","termid":"PBO:0078000"}


id: MONDO:1010804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperostosis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperostosis, non-human animal","termid":"MONDO:1010157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperostosis, pig","secondary_identifiers":["OMIA:000507-9823"],"termid":"MONDO:1010804","xrefs":{"Monarch":{"xref_id":"1010804"}}}


id: SO:0000750
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin_of_replication that is used for the amplification of a chromosomal nucleic acid sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amplification_origin","synonyms":[{"name":"amplification origin","type":"exact"}],"termid":"SO:0000750"}


id: GO:0103026
data:
  {"annotated_genes":["SJAG_04242"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99243,113737],"is_not":false,"summary":null,"term":"GO:0103026"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 1-phosphate + H2O = D-fructose + phosphate.","definition_xrefs":["RHEA:35603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"fructose-1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-5186"],"termid":"GO:0103026","terms_by_termid":{"GO:0103026":null}}


id: GO:0050233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + O2 = 2-dehydro-D-glucose + H2O2.","definition_xrefs":["EC:1.1.3.10","RHEA:10552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyranose oxidase activity","secondary_identifiers":["KEGG_REACTION:R00302","MetaCyc:PYRANOSE-OXIDASE-RXN"],"synonyms":[{"name":"glucose 2-oxidase activity","type":"related"},{"name":"pyranose-2-oxidase activity","type":"related"},{"name":"pyranose:oxygen 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050233"}


id: FYPO:0003309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of IMP cyclohydrolase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal IMP cyclohydrolase activity","termid":"FYPO:0003309"}


id: PBO:0050436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein L like","termid":"PBO:0050436"}


id: MONDO:0000749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast disease characterized by a collection of pus in the breast.","definition_xrefs":["DOID:0060323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast abscess","secondary_identifiers":["MEDGEN:508760","icd11.foundation:1033306788","SCTID:28432003","UMLS:C0151463"],"termid":"MONDO:0000749","xrefs":{"Monarch":{"xref_id":"0000749"}}}


id: MONDO:0020790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gaze palsy with progressive scoliosis","termid":"MONDO:0011810"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gaze palsy, familial horizontal, with progressive scoliosis 1","secondary_identifiers":["UMLS:C4551964","MEDGEN:1647423","OMIM:607313"],"synonyms":[{"name":"HGPPS","type":"exact"},{"name":"HGPPS1","type":"exact"},{"name":"Ophthalmoplegia, Progressive External, and Scoliosis","type":"related"},{"name":"gaze palsy, familial horizontal, with progressive scoliosis 1","type":"exact"},{"name":"gaze palsy, familial horizontal, with progressive scoliosis, 1","type":"exact"}],"termid":"MONDO:0020790","xrefs":{"Monarch":{"xref_id":"0020790"}}}


id: GO:0070370
data:
  {"annotated_genes":["SJAG_04187","SJAG_03527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103383,103495],"is_not":false,"summary":null,"term":"GO:0070370"}]},"cv_name":"biological_process","definition":"Any process that increases heat tolerance of a cell in response to high temperatures.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat acclimation","termid":"GO:0010286"},{"relation_name":"is_a","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03527":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular heat acclimation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular thermotolerance","type":"exact"}],"termid":"GO:0070370","terms_by_termid":{"GO:0070370":null}}


id: PBO:0110496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 11","termid":"PBO:0110496"}


id: PBO:0034818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark Lnp1","termid":"PBO:0034818"}


id: PBO:0067665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 843, pseudogene","termid":"PBO:0067665"}


id: GO:0140842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine (position 5).","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain S5 O-GlcNAc transferase activity","termid":"GO:0140842"}


id: PBO:0036483
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARGinine requiring","termid":"PBO:0036483"}


id: PBO:0058970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melan-A","termid":"PBO:0058970"}


id: PR:O14003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01671","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.10c","secondary_identifiers":["UniProtKB:O14003"],"synonyms":[{"name":"Spom972h-RFC5","type":"exact"},{"name":"replication factor C3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14003"}


id: MONDO:0010271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked myotubular myopathy-abnormal genitalia syndrome is a rare chromosomal anomaly, partial deletion of the long arm of chromosome X, characterized by a combination of clinical manifestations of X-linked myotubular myopathy and a 46,XY disorder of sex development. Patients present with severe form of congenital myopathy and abnormal male genitalia.","definition_xrefs":["Orphanet:456328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"X-linked myotubular myopathy","termid":"MONDO:0010683"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome X","termid":"MONDO:0017007"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"X-linked myotubular myopathy-abnormal genitalia syndrome","secondary_identifiers":["OMIM:300219","UMLS:C1846169","GARD:17792","MEDGEN:335354","MESH:C564561"],"synonyms":[{"name":"Xq28 contiguous gene deletion syndrome","type":"exact"},{"name":"myotubular myopathy with abnormal genital development","type":"related"}],"termid":"MONDO:0010271","xrefs":{"Monarch":{"xref_id":"0010271"}}}


id: PBO:0070548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 14","termid":"PBO:0070548"}


id: MONDO:0006179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ameloblastoma with prominent desmoplastic stroma that causes compression of the neoplastic epithelial islands.","definition_xrefs":["NCIT:C39758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameloblastoma","termid":"MONDO:0017795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoplastic ameloblastoma","secondary_identifiers":["MEDGEN:105345","UMLS:C0457533","EFO:1000215"],"synonyms":[{"name":"desmoplastic ameloblastoma","type":"exact"}],"termid":"MONDO:0006179","xrefs":{"Monarch":{"xref_id":"0006179"}}}


id: GO:1904054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholangiocyte proliferation.","definition_xrefs":["GOC:TermGenie","PMID:24434010","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"cholangiocyte proliferation","termid":"GO:1990705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cholangiocyte proliferation","synonyms":[{"name":"regulation of hepatoblast proliferation","type":"exact"}],"termid":"GO:1904054"}


id: GO:0098620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Ser-tRNA(Sec) + ATP = Sep-tRNA(Sec) + ADP.","definition_xrefs":["PMID:15317934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"seryl-selenocysteinyl-tRNA kinase activity","secondary_identifiers":["Reactome:R-HSA-2408507"],"termid":"GO:0098620"}


id: GO:0090015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of leaflet formation as a result of the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"},{"relation_name":"is_a","term_name":"regulation of leaflet formation","termid":"GO:0090016"},{"relation_name":"is_a","term_name":"positive regulation of leaf development","termid":"GO:1905623"},{"relation_name":"positively_regulates","term_name":"leaflet formation","termid":"GO:0090014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of leaflet formation by auxin mediated signaling pathway","synonyms":[{"name":"positive regulation of leaflet formation by auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0090015"}


id: GO:0003165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a Purkinje myocyte over time, from its formation to the mature structure. The Purkinje myocyte (also known as cardiac Purkinje fiber) is part of the cardiac conduction system that receives signals from the bundle of His and innervates the ventricular cardiac muscle.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue development","termid":"GO:0003229"},{"relation_name":"part_of","term_name":"His-Purkinje system development","termid":"GO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte development","synonyms":[{"name":"cardiac Purkinje fiber development","type":"exact"}],"termid":"GO:0003165"}


id: PBO:0028574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_arginine_import","termid":"PBO:0028574"}


id: PBO:0073321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 4","termid":"PBO:0073321"}


id: PR:Q9USV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mep33 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export protein 33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.02","synonyms":[{"name":"Spom972h-mep33","type":"exact"}],"termid":"PR:Q9USV4"}


id: GO:0046600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of centriole replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of centrosome duplication","termid":"GO:0010826"},{"relation_name":"is_a","term_name":"regulation of centriole replication","termid":"GO:0046599"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"centriole replication","termid":"GO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"negative regulation of centriole replication","synonyms":[{"name":"down regulation of centriole replication","type":"exact"},{"name":"down-regulation of centriole replication","type":"exact"},{"name":"downregulation of centriole replication","type":"exact"},{"name":"inhibition of centriole replication","type":"narrow"}],"termid":"GO:0046600"}


id: PBO:0005090
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undergoes depletion in translin deficient cells via a translin-dependent proteasome independent pathway","termid":"PBO:0005090"}


id: GO:1905005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial to mesenchymal transition involved in endocardial cushion formation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:18718461","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"regulates","term_name":"epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:1905005"}


id: PBO:0081197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIM2 antisense RNA 1","termid":"PBO:0081197"}


id: GO:0035663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 2 protein, a pattern recognition receptor that binds microbial pattern motifs to initiate an innate immune response.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Toll-like receptor 2 binding","synonyms":[{"name":"TLR2 binding","type":"exact"}],"termid":"GO:0035663"}


id: RO:0002150
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"X continuous_with Y if and only if X and Y share a fiat boundary.","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"continuous_with","termid":"RO:0002150"}


id: PBO:0065172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin 2","termid":"PBO:0065172"}


id: PATO:0001172
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity quality inhering in a bearer by virtue of the bearer's inability to recover its size and shape after deformation in any way.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elasticity","termid":"PATO:0001031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inelastic","termid":"PATO:0001172"}


id: MONDO:0017527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of an index finger","termid":"MONDO:0008271"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of an index finger, unilateral","secondary_identifiers":["icd11.foundation:734031453","Orphanet:295152"],"synonyms":[{"name":"preaxial polydactyly type 3, unilateral","type":"exact"}],"termid":"MONDO:0017527","xrefs":{"Monarch":{"xref_id":"0017527"}}}


id: GO:0106076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + lysine in peptide = CoA + N-succinyl-lysine-peptide.","definition_xrefs":["PMID:29211711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide N-succinyltransferase activity","termid":"GO:0106075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"peptide-lysine-N-succinyltransferase activity","termid":"GO:0106076"}


id: FYPO:0005424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal during telophase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic chromosome condensation","termid":"FYPO:0003286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0000337","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic chromosome condensation during telophase","synonyms":[{"name":"decreased chromosome condensation during mitotic telophase","type":"exact"},{"name":"decreased mitotic chromosome condensation at telophase","type":"exact"},{"name":"decreased mitotic chromosome condensation during telophase during vegetative growth","type":"exact"},{"name":"reduced mitotic chromosome condensation during telophase","type":"exact"}],"termid":"FYPO:0005424"}


id: PBO:0002623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved ATP binding protein, implicated in sister chroamtid cohesion","termid":"PBO:0002623"}


id: GO:0140546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a symbiont that act to protect or prevent damage to the host.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to symbiont","termid":"GO:0140546"}


id: FYPO:0003457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of homocysteine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular homocysteine level","synonyms":[{"name":"increased cellular homocysteine level during mitotic cell cycle","type":"related"},{"name":"increased cellular homocysteine level during vegetative growth","type":"exact"},{"name":"increased homocysteine accumulation","type":"related"}],"termid":"FYPO:0003457"}


id: FYPO:0007431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mutations occur at a higher or lower rate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered mutation rate","synonyms":[{"name":"abnormal mutation rate","type":"exact"},{"name":"altered mutation rate during mitotic cell cycle","type":"related"},{"name":"altered mutation rate during vegetative growth","type":"exact"}],"termid":"FYPO:0007431"}


id: PBO:0056059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich adaptor protein 1 like","termid":"PBO:0056059"}


id: GO:0000363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the first transesterification reaction of U12-type spliceosomal mRNA splicing. The intron branch site adenosine is the nucleophile attacking the 5' splice site, resulting in cleavage at this position. In cis splicing, this is the step that forms a lariat structure of the intron RNA, which is still joined to the 3' exon. The catalytic site is thought to be formed by U6atac snRNA and/or U2atac snRNA, and/or associated proteins.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"gene_count":0,"genotype_count":0,"name":"obsolete first U12-type spliceosomal transesterification activity (obsolete GO:0000363)","synonyms":[{"name":"first U12-type spliceosomal transesterification activity","type":"exact"},{"name":"lariat formation, 5'-splice site cleavage","type":"broad"}],"termid":"GO:0000363"}


id: GO:0106018
data:
  {"annotated_genes":["SJAG_04545","SJAG_00063","SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107457,86945,110311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043813"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol phosphate + phosphate.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol bisphosphate phosphatase activity","termid":"GO:0034593"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_02289":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"phosphatidylinositol-3,5-bisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106018","terms_by_termid":{"GO:0043813":null}}


id: PBO:0060982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGFR antisense RNA 1","termid":"PBO:0060982"}


id: GO:1905378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a D-galactose stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:26261574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"},{"relation_name":"is_a","term_name":"response to D-galactose","termid":"GO:1905377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to D-galactose","synonyms":[{"name":"cellular response to D-Gal","type":"exact"},{"name":"cellular response to D-galacto-hexose","type":"exact"}],"termid":"GO:1905378"}


id: MONDO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cutaneous lesion presenting as a scaly verrucous plaque. Morphologically, the plaque contains nests of basaloid cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"Borst-Jadassohn intraepidermal carcinoma","secondary_identifiers":["ICDO:8096/0","NCIT:C4110","MEDGEN:424845","SCTID:403886007","UMLS:C2937231","DOID:7039"],"synonyms":[{"name":"Bowen's disease, clonal","type":"exact"},{"name":"intraepidermal epithelioma of Jadassohn","type":"exact"}],"termid":"MONDO:0004083","xrefs":{"Monarch":{"xref_id":"0004083"}}}


id: PBO:0110389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3B","termid":"PBO:0110389"}


id: PBO:0051376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR22-2 (pseudogene)","termid":"PBO:0051376"}


id: GO:0060791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a sebaceous gland placode forms. A sebaceous gland placode is a thickening of the ectoderm that will give rise to the sebaceous gland bud.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"sebaceous gland development","termid":"GO:0048733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland placode formation","termid":"GO:0060791"}


id: PBO:0030320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_palmitoyl-CoA_ligase_activity","termid":"PBO:0030320"}


id: PBO:0002744
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMSH","termid":"PBO:0002744"}


id: GO:0075134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host calcium or calmodulin-mediated signal transduction (obsolete GO:0075134)","synonyms":[{"name":"positive regulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075134"}


id: PBO:0051190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-8 (non-functional)","termid":"PBO:0051190"}


id: PBO:0027674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_beta-glucan_level","termid":"PBO:0027674"}


id: PBO:0050410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPD divergent transcript","termid":"PBO:0050410"}


id: PBO:0047034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 98 member B","termid":"PBO:0047034"}


id: PBO:0016095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex ATPase subunit Pgp2","termid":"PBO:0016095"}


id: MONDO:0017624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis (FHHNC) is a form of familial primary hypomagnesemia (FPH), characterized by renal magnesium (Mg) and calcium (Ca) wasting, nephrocalcinosis, kidney failure and, in some cases, severe ocular impairment. Two subtypes of FHHNC are described: FHHNC with severe ocular involvement (FHHNCOI) and without severe ocular involvement (FHHN).","definition_xrefs":["Orphanet:306516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia","termid":"MONDO:0018100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis","secondary_identifiers":["MEDGEN:1843047","GARD:21254","UMLS:C5679977"],"synonyms":[{"name":"FHHNC","type":"exact"},{"name":"Michellis-Castrillo syndrome","type":"exact"}],"termid":"MONDO:0017624","xrefs":{"Monarch":{"xref_id":"0017624"}}}


id: PBO:0011452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex subunit Vps11 (predicted)","termid":"PBO:0011452"}


id: GO:0090049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:dph","GOC:rl","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"}


id: FYPO:0008243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the nucleus is abnormal during sporulation.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during meiotic cell cycle","termid":"FYPO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002403","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear morphology during sporulation","termid":"FYPO:0008243"}


id: FYPO:0004189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydroxyurea is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during cellular response to hydroxyurea","synonyms":[{"name":"increased protein accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased protein level during cellular response to HU","type":"exact"},{"name":"increased protein level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0004189"}


id: MONDO:0011695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uveal melanoma","termid":"MONDO:0006486"},{"relation_name":"is_a","term_name":"susceptibility to uveal melanoma","termid":"MONDO:0007966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, uveal, susceptibility to, 1","secondary_identifiers":["OMIM:606660","UMLS:C1847724","MEDGEN:376198"],"synonyms":[{"name":"UVM1","type":"exact"},{"name":"melanoma, uveal, susceptibility to, 1","type":"exact"},{"name":"melanoma, uveal, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0011695","xrefs":{"Monarch":{"xref_id":"0011695"}}}


id: MONDO:0011136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Quebec platelet syndrome (QPS) is a platelet granule disorder characterized by moderate to severe bleeding after trauma, surgery or obstetric interventions, frequent ecchymoses, mucocutaneous bleeding and muscle and joint bleeds.","definition_xrefs":["Orphanet:220436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"alpha granule disease","termid":"MONDO:0020117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Quebec platelet disorder","secondary_identifiers":["MESH:C536260","OMIM:601709","DOID:0111050","icd11.foundation:1618741944","UMLS:C1866423","GARD:8345","MEDGEN:356528"],"synonyms":[{"name":"BDPLT5","type":"exact"},{"name":"QPD","type":"related"},{"name":"Quebec platelet disorder","type":"exact"},{"name":"bleeding disorder, platelet-type, 5","type":"related"},{"name":"factor 5 Quebec","type":"related"},{"name":"factor V Quebec","type":"exact"},{"name":"platelet-type bleeding disorder 5","type":"exact"}],"termid":"MONDO:0011136","xrefs":{"Monarch":{"xref_id":"0011136"}}}


id: PBO:0113202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein; component of the interface between microtubules and the kinetochore; involved in sister chromatid separation and mitotic spindle elongation; involved in karyogamy during mating; stabilizes Kip2p at microtubule plus ends and recruits Kip2p to mitotic SPBs; essential in polyploid cells but not in haploid or diploid cells; promotes plus-end directed movement of Dyn1p; ortholog of mammalian CLIP-170","termid":"PBO:0113202"}


id: PBO:0080639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 87","termid":"PBO:0080639"}


id: GO:0015857
data:
  {"annotated_genes":["SJAG_03970","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87303],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[94733,87656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The directed movement of uracil, 2,4-dioxopyrimidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"uracil transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015857","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: MONDO:0100168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"desmoid tumor","termid":"MONDO:0007608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoid tumor caused by somatic mutation","secondary_identifiers":["MEDGEN:436434","DOID:0111349","UMLS:C2675440"],"termid":"MONDO:0100168","xrefs":{"Monarch":{"xref_id":"0100168"}}}


id: GO:1902253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway by p53 class mediator.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:15705871","GOC:rl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway by p53 class mediator","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902253"}


id: _global:results_in_transport_to_from_or_in
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"_global:related_via_localization_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_to_from_or_in","secondary_identifiers":["RO:0002344"],"termid":"_global:results_in_transport_to_from_or_in"}


id: MONDO:0011202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"RHYNS syndrome is characterized by the association of retinitis pigmentosa, hypopituitarism, nephronophthisis, and skeletal dysplasia.","definition_xrefs":["Orphanet:140976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"RHYNS syndrome","secondary_identifiers":["OMIM:602152","UMLS:C1865794","MESH:C537612","MEDGEN:356371","GARD:9681","SCTID:723999009"],"synonyms":[{"name":"RHYNS syndrome","type":"exact"},{"name":"retinitis pigmentosa syndrome","type":"related"},{"name":"retinitis pigmentosa, hypopituitarism, nephronophthisis, and mild skeletal dysplasia","type":"related"},{"name":"retinitis pigmentosa-hypopituitarism-nephronophthisis-skeletal dysplasia syndrome","type":"exact"}],"termid":"MONDO:0011202","xrefs":{"Monarch":{"xref_id":"0011202"}}}


id: PBO:0049206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 1","termid":"PBO:0049206"}


id: PBO:0000446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD protein-2 Cph2","termid":"PBO:0000446"}


id: GO:0015805
data:
  {"annotated_genes":["SJAG_01890","SJAG_01589"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87479,101788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"},{"annotations":[63997,68724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901962"}]},"cv_name":"biological_process","definition":"The directed movement of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"S-adenosyl-L-methionine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"S-adenosyl methionine transport","type":"exact"},{"name":"S-adenosylmethionine transport","type":"exact"},{"name":"SAM transport","type":"exact"}],"termid":"GO:0015805","terms_by_termid":{"GO:1901962":null,"GO:1990543":null}}


id: MONDO:0004755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of ruminants with tapeworms of the genus Moniezia.","definition_xrefs":["MESH:D008989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monieziasis","secondary_identifiers":["DOID:931","MEDGEN:6424","UMLS:C0026414"],"termid":"MONDO:0004755","xrefs":{"Monarch":{"xref_id":"0004755"}}}


id: PBO:0043935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage associated protein","termid":"PBO:0043935"}


id: PBO:0004365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk21","termid":"PBO:0004365"}


id: PBO:0065364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate stem cell antigen","termid":"PBO:0065364"}


id: PBO:0046423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A7","termid":"PBO:0046423"}


id: PBO:0028071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_mononucleate_vegetative_cell","termid":"PBO:0028071"}


id: PBO:0082746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; non-essential gene required for regulation of ribosomal protein genes and the cell wall/stress response; null mutants are osmosensitive; RSC30 has a paralog, RSC3, that arose from the whole genome duplication","termid":"PBO:0082746"}


id: PATO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001132 relative ratio value (obsolete PATO:0001132)","termid":"PATO:0001132"}


id: PBO:0068294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase 3","termid":"PBO:0068294"}


id: PBO:0053393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 322","termid":"PBO:0053393"}


id: PBO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog","termid":"PBO:0001511"}


id: PBO:0075114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 163","termid":"PBO:0075114"}


id: PBO:0082082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribulose-1-phosphate dehydratase; acts in the methionine salvage pathway; potential Smt3p sumoylation substrate; expression downregulated by caspofungin and deletion mutant is caspofungin resistant","termid":"PBO:0082082"}


id: GO:0071225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muramyl dipeptide","termid":"GO:0032495"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to muramyl dipeptide","termid":"GO:0071225"}


id: PBO:0048926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin B1","termid":"PBO:0048926"}


id: PR:P32587
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pyp3 gene.","definition_xrefs":["UniProtKB:P32587","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.09","synonyms":[{"name":"PTPase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pyp3","type":"exact"},{"name":"protein-tyrosine phosphatase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32587"}


id: SO:0001438
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons ATH (ATT, ATC and ATA).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine","synonyms":[{"name":"I","type":"exact"},{"name":"Ile","type":"exact"}],"termid":"SO:0001438"}


id: PBO:0070396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAR related orphan receptor B","termid":"PBO:0070396"}


id: PBO:0075041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-4","termid":"PBO:0075041"}


id: MONDO:0019211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital anonychia is characterized by nail abnormalities ranging from onychodystrophy (dystrophic nails) to anonychia (absence of nails). Onychodystrophy-anonychia has been described in at least four generations of a family with male-to-male transmission, suggesting autosomal dominant transmission. Anonychia has been described in approximately less than 20 cases; it is likely to be transmitted as an autosomal recessive trait. Total anonychia congenita, in which all the fingernails and toenails are absent, may have an autosomal dominant inheritance pattern.","definition_xrefs":["Orphanet:79143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital anonychia","secondary_identifiers":["GARD:10048"],"synonyms":[{"name":"autosomal recessive nonsyndromic congenital nail disorder-4","type":"related"},{"name":"congenital anonychia","type":"related"},{"name":"isolated anonychia","type":"exact"},{"name":"nonsyndromic congenital nail disorder, 4","type":"related"}],"termid":"MONDO:0019211","xrefs":{"Monarch":{"xref_id":"0019211"}}}


id: PBO:0068062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 367","termid":"PBO:0068062"}


id: SO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Amino acid involved in the activity of an enzyme.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"},{"relation_name":"part_of","term_name":"polypeptide_catalytic_motif","termid":"SO:0100019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalytic_residue","secondary_identifiers":["BS:00026"],"synonyms":[{"name":"act_site","type":"related"},{"name":"active site residue","type":"exact"},{"name":"catalytic residue","type":"exact"}],"termid":"SO:0001104"}


id: PBO:0003521
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. Pombe YPD1-like protein","termid":"PBO:0003521"}


id: PBO:0058902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12120","termid":"PBO:0058902"}


id: PBO:0038392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_during","termid":"PBO:0038392"}


id: PBO:0085052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; has structural resemblance to plant storage and ligand binding proteins (canavalin, glycinin, auxin binding protein) and to some enzymes (epimerase, germin); localizes to the nucleus and cytoplasm","termid":"PBO:0085052"}


id: GO:0060185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The opening and spreading out of the outer ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"outer ear morphogenesis","termid":"GO:0042473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear unfolding","termid":"GO:0060185"}


id: PBO:0017518
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Horse Tails","termid":"PBO:0017518"}


id: MOD:00405
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Applied Biosystems original isotope-coded affinity tag d8 reagent.","definition_xrefs":["Unimod:12#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Applied Biosystems original ICAT(TM) d8 modified cysteine","synonyms":[{"name":"Applied Biosystems original ICAT(TM) d8","type":"related"},{"name":"ICAT-D:2H(8)","type":"related"}],"termid":"MOD:00405"}


id: FYPO:0005361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the level of large Y-shaped DNA replication intermediates is greater than normal. Large Y-shaped intermediates are formed late in the passive replication of a DNA region by a replication fork moving from outside the region.","definition_xrefs":["PMID:19416828","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased level of large-Y replication intermediates","synonyms":[{"name":"increased level of large Y-shaped DNA replication intermediates","type":"exact"},{"name":"increased level of large-Y replication intermediates during mitotic cell cycle","type":"related"},{"name":"increased level of large-Y replication intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0005361"}


id: PBO:0062878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthodenticle homeobox 2","termid":"PBO:0062878"}


id: FYPO:0002486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic strand displacement is decreased. Meiotic strand displacement is the part of meiotic recombination in which the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA is rejected.","definition_xrefs":["PMID:22723423","PomBase:mah","GO:0000714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"decreased meiotic strand displacement","synonyms":[{"name":"decreased D-loop unwinding","type":"related"},{"name":"decreased meiotic D-loop dissociation","type":"exact"},{"name":"decreased meiotic D-loop processing","type":"related"},{"name":"reduced meiotic strand displacement","type":"exact"}],"termid":"FYPO:0002486"}


id: GO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell aggregation","termid":"GO:0098743"},{"relation_name":"part_of","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage condensation","termid":"GO:0001502"}


id: PATO:0000305
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000305 age value (obsolete PATO:0000305)","termid":"PATO:0000305"}


id: FYPO:0004203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium import","termid":"FYPO:0001953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased calcium import","synonyms":[{"name":"increased calcium import during mitotic cell cycle","type":"related"},{"name":"increased calcium import during vegetative growth","type":"exact"},{"name":"increased calcium import into cell","type":"exact"},{"name":"increased calcium ion import","type":"exact"},{"name":"increased calcium ion import across plasma membrane","type":"exact"},{"name":"increased calcium uptake","type":"exact"},{"name":"increased calcium uptake into intracellular compartments","type":"related"},{"name":"increased cellular calcium import","type":"exact"}],"termid":"FYPO:0004203"}


