# terms

id: PR:Q9UU89
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inosine triphosphate pyrophosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04982","PANTHER:PTHR11067:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine triphosphate pyrophosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.10","secondary_identifiers":["UniProtKB:Q9UU89"],"synonyms":[{"name":"ITPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NTPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ITPA","type":"exact"},{"name":"inosine triphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-canonical purine NTP pyrophosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-standard purine NTP pyrophosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nucleoside-triphosphate diphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nucleoside-triphosphate pyrophosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU89"}


id: GO:0098869
data:
  {"annotated_genes":["SJAG_01216","SJAG_01199","SJAG_05181","SJAG_03166","SJAG_04125","SJAG_03623","SJAG_04823","SJAG_00141","SJAG_02630","SJAG_04632","SJAG_01162","SJAG_04953","SJAG_00668","SJAG_02515","SJAG_01734","SJAG_04403","SJAG_00489","SJAG_04399","SJAG_03653","SJAG_04788","SJAG_03303"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57334,57335,63163,64861,64862,67549,68011,68012,68013,68014,94390,104384,104467,105953],"is_not":false,"summary":null,"term":"GO:0098869"},{"annotations":[104203,107983,94389,116498,99187,117413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[109284,64716,88611,99344,57866,88191,98468,68171,92334,109240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular oxidant detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098869","terms_by_termid":{"GO:0019430":null,"GO:0061692":null,"GO:0098869":null}}


id: MONDO:0005212
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A rare aggressive malignant mesenchymal neoplasm arising from skeletal muscle. It usually occurs in children and young adults. Only a small percentage of tumors arise in the skeletal muscle of the extremities. The majority arise in other anatomical sites.","definition_xrefs":["NCIT:C3359"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skeletal muscle cancer","termid":"MONDO:0002847"},{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular tumor (obsolete MONDO:0016123)","termid":"MONDO:0016123"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rhabdomyosarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:20561","NANDO:2200056","Orphanet:780","MESH:D012208","ICD9:171.9","ICDO:8900/3","GARD:11951","DOID:3247","ONCOTREE:RMS","SCTID:302847003","UMLS:C0035412","EFO:0002918","HP:0002859","MedDRA:10039022"],"synonyms":[{"name":"rhabdomyosarcoma","type":"exact"},{"name":"rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma, malignant","type":"exact"}],"termid":"MONDO:0005212","terms_by_termid":{"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0005212"}}}


id: MONDO:0000019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectodermal dysplasia (obsolete MONDO:0000019)","termid":"MONDO:0000019","xrefs":{"Monarch":{"xref_id":"0000019"}}}


id: PBO:0084165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly-conserved N-terminally anchored AAA-ATPase; distributed in the mitochondrial outer membrane and peroxisomes; involved in mitochondrial protein sorting; functions as an extraction engine in local organelle surveillance to remove and initiate degradation of mistargeted proteins, ensuring fidelity of organelle-specific localization of tail-anchored proteins; contains an N-terminal transmembrane domain and C-terminal cytoplasmic ATPase domain","termid":"PBO:0084165"}


id: PBO:0060187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC5B antisense RNA 1","termid":"PBO:0060187"}


id: MONDO:0800063
data:
  {"annotated_genes":["SJAG_01776","SJAG_02246","SJAG_02908","SJAG_01071","SJAG_01076","SJAG_02237","SJAG_04183","SJAG_04586"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032684"},{"annotations":[85599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019407"},{"annotations":[86475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008872"},{"annotations":[84525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014031"},{"annotations":[86230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014991"},{"annotations":[85914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011715"},{"annotations":[85630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014350"},{"annotations":[84330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014686"}]},"cv_name":"mondo","definition":"A skeletal dysplsia characterized by primordial dwarfism, an extreme growth deficiency disorder that has its onset during embryonic development and persists throughout life and slender bone disorder, a heterogeneous group of neonatal dwarfism syndromes, usually of unknown etiology, associated with gracile (thin) bones, multiple fractures, and prenatal or early postnatal death.","definition_xrefs":["PMID:25490023","PMID:31633310","PMID:19006220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01071":null,"SJAG_01076":null,"SJAG_01776":null,"SJAG_02237":null,"SJAG_02246":null,"SJAG_02908":null,"SJAG_04183":null,"SJAG_04586":null},"genotype_count":0,"is_obsolete":false,"name":"primordial dwarfism and slender bone disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800063","terms_by_termid":{"MONDO:0008872":null,"MONDO:0011715":null,"MONDO:0014031":null,"MONDO:0014350":null,"MONDO:0014686":null,"MONDO:0014991":null,"MONDO:0019407":null,"MONDO:0032684":null},"xrefs":{"Monarch":{"xref_id":"0800063"}}}


id: MONDO:0011249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal dominant inheritance of generalized dystonia with severe involvement of the legs, mild involvement of the face and arms, and onset in infancy.","definition_xrefs":["DOID:0090058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset generalized limb-onset dystonia","termid":"MONDO:0007492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia with onset in infancy","secondary_identifiers":["GARD:9631","MEDGEN:400706","UMLS:C1865205","MESH:C536969","OMIM:602554"],"synonyms":[{"name":"torsion dystonia with onset in infancy","type":"exact"}],"termid":"MONDO:0011249","xrefs":{"Monarch":{"xref_id":"0011249"}}}


id: GO:1901350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cell-cell signaling that is involved in cell-cell junction organization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling involved in cell-cell junction organization (obsolete GO:1901350)","synonyms":[{"name":"cell-cell signaling involved in cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell signaling involved in cell-cell junction biogenesis","type":"related"},{"name":"cell-cell signaling involved in cell-cell junction organisation","type":"exact"},{"name":"cell-cell signaling involved in intercellular junction assembly and maintenance","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction biogenesis","type":"related"},{"name":"cell-cell signalling involved in cell-cell junction organisation","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction organization","type":"exact"},{"name":"cell-cell signalling involved in intercellular junction assembly and maintenance","type":"exact"}],"termid":"GO:1901350"}


id: PBO:0012556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIn Suppressing","termid":"PBO:0012556"}


id: GO:0016641
data:
  {"annotated_genes":["SJAG_01881","SJAG_00707","SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"},{"annotations":[113886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"},{"annotations":[86940,110971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null,"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.4.3.-"],"termid":"GO:0016641","terms_by_termid":{"GO:0003884":null,"GO:0004733":null,"GO:0043799":null}}


id: PBO:0030995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_stress_during_vegetative_growth","termid":"PBO:0030995"}


id: MONDO:0013943
data:
  {"annotated_genes":["SJAG_03440"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86453],"is_not":false,"summary":null,"term":"MONDO:0013943"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX16 defect","termid":"MONDO:0100269"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0005244","MONDO:0006025","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 8B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15870","MEDGEN:766874","OMIM:614877","DOID:0081437","NCIT:C155763","UMLS:C3553960"],"synonyms":[{"name":"PBD8B","type":"related"},{"name":"peroxisome biogenesis disorder 8B","type":"exact"},{"name":"peroxisome biogenesis disorder type 8B","type":"exact"}],"termid":"MONDO:0013943","terms_by_termid":{"MONDO:0013943":null},"xrefs":{"Monarch":{"xref_id":"0013943"}}}


id: PBO:0050629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 4","termid":"PBO:0050629"}


id: GO:0047471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: maltose = trehalose.","definition_xrefs":["EC:5.4.99.16","MetaCyc:5.4.99.16-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"maltose alpha-D-glucosyltransferase activity","secondary_identifiers":["RHEA:15145"],"synonyms":[{"name":"maltose alpha-D-glucosylmutase activity","type":"related"},{"name":"maltose glucosylmutase activity","type":"related"},{"name":"trehalose synthase activity","type":"related"}],"termid":"GO:0047471"}


id: PBO:0003681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein trafficking protein Pga2 (predicted)","termid":"PBO:0003681"}


id: MONDO:0003737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Leydig cell tumor characterized by a large size, cellular atypia, high mitotic activity, vascular invasion and necrotic changes. The prognosis is usually poor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant Leydig cell tumor","termid":"MONDO:0000377"},{"relation_name":"is_a","term_name":"testicular Leydig cell tumor","termid":"MONDO:0003124"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant testicular Leydig cell tumor","secondary_identifiers":["NCIT:C39942","MEDGEN:271769","UMLS:C1515288","DOID:6021"],"synonyms":[{"name":"testicular Leydig cell tumor, malignant","type":"exact"}],"termid":"MONDO:0003737","xrefs":{"Monarch":{"xref_id":"0003737"}}}


id: GO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"},{"relation_name":"is_a","term_name":"negative regulation of type II hypersensitivity","termid":"GO:0002893"},{"relation_name":"negatively_regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IIb hypersensitivity","synonyms":[{"name":"down regulation of type IIb hypersensitivity","type":"exact"},{"name":"down-regulation of type IIb hypersensitivity","type":"exact"},{"name":"downregulation of type IIb hypersensitivity","type":"exact"},{"name":"inhibition of type IIb hypersensitivity","type":"narrow"}],"termid":"GO:0001800"}


id: PBO:0039372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMMECR1 like pseudogene 1","termid":"PBO:0039372"}


id: MONDO:0009157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any split hand-foot malformation in which the cause of the disease is a mutation in the WNT10B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand-foot malformation","termid":"MONDO:0016576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand-foot malformation 6","secondary_identifiers":["MEDGEN:440845","OMIM:225300","UMLS:C2749665","DOID:0090026","GARD:15166","MESH:C567616"],"synonyms":[{"name":"SHFM6","type":"exact"},{"name":"WNT10B split hand-foot malformation","type":"exact"},{"name":"ectrodactyly, autosomal recessive","type":"related"},{"name":"split hand-foot malformation caused by mutation in WNT10B","type":"exact"},{"name":"split hand-foot malformation type 6","type":"exact"},{"name":"split-hand/foot malformation 6","type":"related"},{"name":"split-hand/foot malformation type 6","type":"exact"}],"termid":"MONDO:0009157","xrefs":{"Monarch":{"xref_id":"0009157"}}}


id: MONDO:0041182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity disease","termid":"MONDO:0006597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"polymorphic light eruption","secondary_identifiers":["MEDGEN:508043","UMLS:C0031736","SCTID:238525001","icd11.foundation:1883086071"],"synonyms":[{"name":"polymorphic light eruption","type":"exact"},{"name":"polymorphic photodermatitis","type":"related"},{"name":"polymorphous light eruption","type":"exact"}],"termid":"MONDO:0041182","xrefs":{"Monarch":{"xref_id":"0041182"}}}


id: GO:0033860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of the enzyme NAD(P)H oxidase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NAD(P)H oxidase activity","termid":"GO:0033860"}


id: GO:0030119
data:
  {"annotated_genes":["SJAG_04609","SJAG_03726","SJAG_02805","SJAG_00108","SJAG_00379","SJAG_00800","SJAG_01167","SJAG_01809","SJAG_04931","SJAG_04565","SJAG_02453","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100310,112129,111914,118004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030121"},{"annotations":[110792,95460,107482,110733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030122"},{"annotations":[93383,110634,88112,95324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030123"},{"annotations":[110637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030131"}]},"cv_name":"cellular_component","definition":"Any of several heterotetrameric complexes that link clathrin (or another coat-forming molecule, as hypothesized for AP-3 and AP-4) to a membrane surface; they are found on coated pits and coated vesicles, and mediate sorting of cargo proteins into vesicles. Each AP complex contains two large (a beta and one of either an alpha, gamma, delta, or epsilon) subunits (110-130 kDa), a medium (mu) subunit (approximately 50 kDa), and a small (sigma) subunit (15-20 kDa).","definition_xrefs":["PMID:15473838","GOC:mah","PMID:10611976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"membrane coat","termid":"GO:0030117"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_03726":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"AP-type membrane coat adaptor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin adaptor","type":"related"}],"termid":"GO:0030119","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030123":null,"GO:0030131":null}}


id: PBO:0075117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 166","termid":"PBO:0075117"}


id: PBO:0005576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin efflux transporter Pmd1","termid":"PBO:0005576"}


id: PBO:0059185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morf4 family associated protein 1 like 1","termid":"PBO:0059185"}


id: GO:0043271
data:
  {"annotated_genes":["SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90422,112492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"monoatomic ion transport","termid":"GO:0006811"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of monoatomic ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of ion transport","type":"exact"},{"name":"down-regulation of ion transport","type":"exact"},{"name":"downregulation of ion transport","type":"exact"},{"name":"inhibition of ion transport","type":"narrow"},{"name":"negative regulation of ion transport","type":"broad"}],"termid":"GO:0043271","terms_by_termid":{"GO:1905949":null}}


id: GO:1903069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["PMID:17872946","GO_REF:0000058","GOC:rph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903069)","termid":"GO:1903069"}


id: GO:0002648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of central tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of central tolerance induction","termid":"GO:0002646"},{"relation_name":"positively_regulates","term_name":"central tolerance induction","termid":"GO:0002508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of central tolerance induction","synonyms":[{"name":"activation of central tolerance induction","type":"narrow"},{"name":"stimulation of central tolerance induction","type":"narrow"},{"name":"up regulation of central tolerance induction","type":"exact"},{"name":"up-regulation of central tolerance induction","type":"exact"},{"name":"upregulation of central tolerance induction","type":"exact"}],"termid":"GO:0002648"}


id: FYPO:0007281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during meiosis measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:32012158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal level of meiotic gene mRNA during vegetative growth","synonyms":[{"name":"normal level of meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"normal level of meiotic gene RNA during vegetative growth","type":"exact"},{"name":"normal level of meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"normal level of meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"normal level of meiotic nuclear division gene mRNA during vegetative growth","type":"exact"},{"name":"normal meiotic gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0007281"}


id: GO:0002478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC protein complex. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous antigen","termid":"GO:0019884"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen","synonyms":[{"name":"exogenous peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002478"}


id: PBO:0077877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 4","termid":"PBO:0077877"}


id: PBO:0028591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_heat","termid":"PBO:0028591"}


id: GO:0046872
data:
  {"annotated_genes":["SJAG_04859","SJAG_00555","SJAG_04063","SJAG_02299","SJAG_01776","SJAG_01414","SJAG_01637","SJAG_03822","SJAG_00717","SJAG_03985","SJAG_02247","SJAG_02539","SJAG_00577","SJAG_00032","SJAG_03539","SJAG_04233","SJAG_00309","SJAG_05344","SJAG_04842","SJAG_00188","SJAG_02575","SJAG_00669","SJAG_01694","SJAG_01044","SJAG_03984","SJAG_02956","SJAG_01672","SJAG_00751","SJAG_00509","SJAG_00803","SJAG_04533","SJAG_02107","SJAG_05264","SJAG_01298","SJAG_01418","SJAG_00199","SJAG_03615","SJAG_03112","SJAG_00485","SJAG_01029","SJAG_01542","SJAG_02511","SJAG_05323","SJAG_03322","SJAG_03222","SJAG_04054","SJAG_02532","SJAG_00231","SJAG_02730","SJAG_02003","SJAG_03752","SJAG_04151","SJAG_04970","SJAG_00502","SJAG_04292","SJAG_02080","SJAG_03032","SJAG_01351","SJAG_02766","SJAG_02648","SJAG_01321","SJAG_02370","SJAG_03850","SJAG_00827","SJAG_04712","SJAG_05010","SJAG_05679","SJAG_02203","SJAG_02435","SJAG_04013","SJAG_03643","SJAG_01797","SJAG_00527","SJAG_02290","SJAG_02954","SJAG_01280","SJAG_02043","SJAG_05243","SJAG_03275","SJAG_03886","SJAG_02298","SJAG_04238","SJAG_03240","SJAG_03509","SJAG_01430","SJAG_04410","SJAG_03346","SJAG_05012","SJAG_04901","SJAG_02461","SJAG_01281","SJAG_02746","SJAG_03051","SJAG_03196","SJAG_01929","SJAG_01593","SJAG_00724","SJAG_00111","SJAG_03968","SJAG_01684","SJAG_00173","SJAG_00240","SJAG_03142","SJAG_04886","SJAG_01715","SJAG_03088","SJAG_03862","SJAG_03225","SJAG_02796","SJAG_04571","SJAG_MIT20","SJAG_04966","SJAG_02349","SJAG_00412","SJAG_03286","SJAG_03939","SJAG_03811","SJAG_01945","SJAG_02908","SJAG_05242","SJAG_00755","SJAG_04726","SJAG_02052","SJAG_01088","SJAG_02521","SJAG_00386","SJAG_05274","SJAG_00439","SJAG_04991","SJAG_04106","SJAG_00237","SJAG_02847","SJAG_00353","SJAG_03613","SJAG_04205","SJAG_04016","SJAG_03793","SJAG_01948","SJAG_MIT04","SJAG_00081","SJAG_06022","SJAG_00044","SJAG_04466","SJAG_01630","SJAG_00461","SJAG_03755","SJAG_00096","SJAG_02415","SJAG_03918","SJAG_04516","SJAG_05338","SJAG_03695","SJAG_03618","SJAG_05353","SJAG_04425","SJAG_02589","SJAG_05273","SJAG_00532","SJAG_01310","SJAG_01765","SJAG_03866","SJAG_04972","SJAG_00381","SJAG_03005","SJAG_00228","SJAG_03930","SJAG_03153","SJAG_01450","SJAG_03883","SJAG_02734","SJAG_00500","SJAG_00181","SJAG_03465","SJAG_03180","SJAG_00406","SJAG_04990","SJAG_02963","SJAG_01875","SJAG_01832","SJAG_01896","SJAG_03313","SJAG_02582","SJAG_01209","SJAG_02503","SJAG_00209","SJAG_02096","SJAG_03976","SJAG_03723","SJAG_03744","SJAG_01535","SJAG_00727","SJAG_03428","SJAG_03006","SJAG_02903","SJAG_00204","SJAG_03761","SJAG_06636","SJAG_04407","SJAG_02399","SJAG_03393","SJAG_04189","SJAG_01854","SJAG_04242","SJAG_00225","SJAG_01760","SJAG_03231","SJAG_01149","SJAG_03405","SJAG_01740","SJAG_00644","SJAG_00321","SJAG_03018","SJAG_06642","SJAG_03303","SJAG_05234","SJAG_04845","SJAG_04429","SJAG_02019","SJAG_00832","SJAG_01498","SJAG_01648","SJAG_02808","SJAG_02319","SJAG_04368","SJAG_03943","SJAG_03813","SJAG_04579","SJAG_04913","SJAG_04403","SJAG_04449","SJAG_01734","SJAG_03657","SJAG_00475","SJAG_04048","SJAG_00638","SJAG_02347","SJAG_05345","SJAG_02149","SJAG_03373","SJAG_00498","SJAG_01677","SJAG_00792","SJAG_00664","SJAG_02138","SJAG_01997","SJAG_00742","SJAG_00758","SJAG_00552","SJAG_04788","SJAG_02447","SJAG_05200","SJAG_01574","SJAG_04621","SJAG_04677","SJAG_04743","SJAG_05245","SJAG_02897","SJAG_04373","SJAG_04051","SJAG_02587","SJAG_04374","SJAG_04129","SJAG_00853","SJAG_02369","SJAG_02694","SJAG_01355","SJAG_04789","SJAG_03140","SJAG_03183","SJAG_04915","SJAG_01686","SJAG_02583","SJAG_01075","SJAG_01930","SJAG_01626","SJAG_03588","SJAG_04297","SJAG_03175","SJAG_03496","SJAG_03276","SJAG_04249","SJAG_05398","SJAG_00456","SJAG_04865","SJAG_00396","SJAG_02007","SJAG_01560","SJAG_04213","SJAG_03370","SJAG_01533","SJAG_04434","SJAG_03398","SJAG_01404","SJAG_03191","SJAG_03071","SJAG_03326","SJAG_04641","SJAG_04757","SJAG_00464","SJAG_02397","SJAG_02786","SJAG_00249","SJAG_00802","SJAG_04043","SJAG_03029","SJAG_05173","SJAG_01992","SJAG_01266","SJAG_06639","SJAG_03538","SJAG_01511","SJAG_03090","SJAG_01179","SJAG_00865","SJAG_02261","SJAG_01004","SJAG_04682","SJAG_03519","SJAG_03771","SJAG_00072","SJAG_03430","SJAG_02406","SJAG_04080","SJAG_00296","SJAG_02206","SJAG_00989","SJAG_02627","SJAG_01572","SJAG_05209","SJAG_02851","SJAG_01253","SJAG_06599","SJAG_00063","SJAG_03831","SJAG_03396","SJAG_03103","SJAG_04964","SJAG_00251","SJAG_04882","SJAG_05373","SJAG_00926","SJAG_05337","SJAG_04414","SJAG_04448","SJAG_01665","SJAG_00337","SJAG_02752","SJAG_01858","SJAG_02794","SJAG_04353","SJAG_03254","SJAG_00483","SJAG_04336","SJAG_05343","SJAG_00612","SJAG_04619","SJAG_00134","SJAG_04574","SJAG_03974","SJAG_03250","SJAG_03626","SJAG_00163","SJAG_05311","SJAG_01140","SJAG_00451","SJAG_00341","SJAG_02629","SJAG_02215","SJAG_04896","SJAG_01673","SJAG_04747","SJAG_00719","SJAG_01372","SJAG_00449","SJAG_04781","SJAG_04487","SJAG_03689","SJAG_03697","SJAG_02709","SJAG_01996","SJAG_02048","SJAG_00706","SJAG_01375","SJAG_00074","SJAG_00037","SJAG_01731","SJAG_00668","SJAG_00561","SJAG_03599","SJAG_00923","SJAG_06597","SJAG_02763","SJAG_01254","SJAG_04538","SJAG_00402","SJAG_01702","SJAG_04898","SJAG_04183","SJAG_01955","SJAG_06576","SJAG_01772","SJAG_01600","SJAG_01165","SJAG_01212","SJAG_00642","SJAG_04553","SJAG_03096","SJAG_01507","SJAG_02689","SJAG_04217","SJAG_01400","SJAG_00119","SJAG_06611","SJAG_05105","SJAG_01313","SJAG_00501","SJAG_00166","SJAG_02938","SJAG_02569","SJAG_00221","SJAG_03324","SJAG_03743","SJAG_01081","SJAG_01137","SJAG_05236","SJAG_03562","SJAG_03044","SJAG_03022","SJAG_02459","SJAG_00988","SJAG_04679","SJAG_02691","SJAG_04362","SJAG_03658","SJAG_02169","SJAG_01194","SJAG_01457","SJAG_03983","SJAG_03227","SJAG_02668","SJAG_03665","SJAG_00964","SJAG_05118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56831,57480,59102,60158,60221,60230,60527,60554,60786,61239,61319,61805,61947,62820,63087,63508,64198,65123,66317,66679,66721,66838,67292,67974,68704,68969,88666,88996,89186,89591,89788,90311,90710,91481,91768,92133,92336,92622,95385,95560,95621,95874,95897,96037,96525,96535,97561,97927,97928,99245,99527,99904,100232,100435,101393,101953,102465,102780,103182,103883,103904,104008,104081,104600,104745,105682,106787,106793,106919,107426,108356,108409,108794,109144,109285,109400,111998,112323,112767,112978,113642,113739,114547,114796,116379,116814],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[96567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046870"},{"annotations":[92581,94906,113130,104451,99887,59872,117322,111308,107553,94568,95488,94413,105637,94037,101697,93250,94881,110169,113056,103178,102805,116912,117991,107823,102037,107447,116128,116766,110658,111331,93998,91401,88854,100817,104313,107217,112603,65340,116655,117463,111449,115749,117698,96068,112895,96160,90425,105282,114260,88822,92744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005509"},{"annotations":[91656,95481,116187,118201,99345,106646,106021,118152,88074,101307,114168,107013,90855,116616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005507"},{"annotations":[113010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008199"},{"annotations":[100409,92163,99760,103912,113011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008198"},{"annotations":[88869,111568,111932,103936,111674,106539,102969,109019,98049,106691,91008,110858,100721,116491,113535,102579,93263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005506"},{"annotations":[96216,93951,97125,89522,105345,110976,108278,64596,88098,112391,87718,95554,97469,105071,109291,107660,114094,96462,111633,92827,114974,102938,90873,95977,99380,116930,89561,100291,98672,93885,96326,87745,102114,99453,97937,90668,96885,98189,87911,104620,104619,114106,96514,93627,109076,96405,100477,100292,93495,96908,104621,90760,98974,105690,99039,96463,98215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000287"},{"annotations":[104918,105072,112340,114795,87457,87763,87711,96547,88192,99040,90761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030145"},{"annotations":[92510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046911"},{"annotations":[94618,111569,118120,90655,96018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016151"},{"annotations":[97470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030955"},{"annotations":[113786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046914"},{"annotations":[115130,97770,102736,115839,102588,57103,103416,58841,109121,91846,91940,111123,112094,117479,103033,65833,99858,117970,112095,117976,89940,112415,93267,97513,98590,88251,88756,102753,94207,87849,107544,109111,57509,89457,108031,111954,99444,112845,114867,103914,91942,87670,104474,100512,102603,112529,116421,98455,104894,87238,104895,112706,103537,100884,117846,87614,100963,116409,92560,109645,89763,100494,100511,108917,70769,106113,111229,57974,109359,115732,107177,101416,61216,106517,112638,96126,97738,114800,92921,114276,115745,91943,92516,104213,87839,113718,87820,88962,89388,96731,97704,101977,109382,95799,115348,107027,115212,92226,112096,74361,113164,104802,87707,89414,105062,117162,109818,90745,106740,90846,104462,87783,91861,112097,114827,88405,91671,95884,100676,115838,89102,68350,88111,110045,94917,104921,86611,87525,108655,67716,110012,97726,113752,104990,105924,96734,113588,89800,65694,102204,110204,101514,101766,104960,114770,104179,88511,91177,98596,102660,104405,104991,116334,91241,99314,90179,114392,113458,113136,113350,116896,117562,91071,88931,92768,97038,101405,107210,113753,58340,96735,96732,100646,110281,113163,110846,114165,61454,114684,115609,89513,95713,115426,113787,112442,88808,93340,93553,103631,110029,88738,93717,86812,95241,95981,96733,98699,100374,104288,106031,88549,90842,91941,104795,107534,110140,112098,95010,89014,105984,108384,112404,107163,93412,112797,112817,113377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008270"}]},"cv_name":"molecular_function","definition":"Binding to a metal ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":443,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00037":null,"SJAG_00044":null,"SJAG_00063":null,"SJAG_00072":null,"SJAG_00074":null,"SJAG_00081":null,"SJAG_00096":null,"SJAG_00111":null,"SJAG_00119":null,"SJAG_00134":null,"SJAG_00163":null,"SJAG_00166":null,"SJAG_00173":null,"SJAG_00181":null,"SJAG_00188":null,"SJAG_00199":null,"SJAG_00204":null,"SJAG_00209":null,"SJAG_00221":null,"SJAG_00225":null,"SJAG_00228":null,"SJAG_00231":null,"SJAG_00237":null,"SJAG_00240":null,"SJAG_00249":null,"SJAG_00251":null,"SJAG_00296":null,"SJAG_00309":null,"SJAG_00321":null,"SJAG_00337":null,"SJAG_00341":null,"SJAG_00353":null,"SJAG_00381":null,"SJAG_00386":null,"SJAG_00396":null,"SJAG_00402":null,"SJAG_00406":null,"SJAG_00412":null,"SJAG_00439":null,"SJAG_00449":null,"SJAG_00451":null,"SJAG_00456":null,"SJAG_00461":null,"SJAG_00464":null,"SJAG_00475":null,"SJAG_00483":null,"SJAG_00485":null,"SJAG_00498":null,"SJAG_00500":null,"SJAG_00501":null,"SJAG_00502":null,"SJAG_00509":null,"SJAG_00527":null,"SJAG_00532":null,"SJAG_00552":null,"SJAG_00555":null,"SJAG_00561":null,"SJAG_00577":null,"SJAG_00612":null,"SJAG_00638":null,"SJAG_00642":null,"SJAG_00644":null,"SJAG_00664":null,"SJAG_00668":null,"SJAG_00669":null,"SJAG_00706":null,"SJAG_00717":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00727":null,"SJAG_00742":null,"SJAG_00751":null,"SJAG_00755":null,"SJAG_00758":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00803":null,"SJAG_00827":null,"SJAG_00832":null,"SJAG_00853":null,"SJAG_00865":null,"SJAG_00923":null,"SJAG_00926":null,"SJAG_00964":null,"SJAG_00988":null,"SJAG_00989":null,"SJAG_01004":null,"SJAG_01029":null,"SJAG_01044":null,"SJAG_01075":null,"SJAG_01081":null,"SJAG_01088":null,"SJAG_01137":null,"SJAG_01140":null,"SJAG_01149":null,"SJAG_01165":null,"SJAG_01179":null,"SJAG_01194":null,"SJAG_01209":null,"SJAG_01212":null,"SJAG_01253":null,"SJAG_01254":null,"SJAG_01266":null,"SJAG_01280":null,"SJAG_01281":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01313":null,"SJAG_01321":null,"SJAG_01351":null,"SJAG_01355":null,"SJAG_01372":null,"SJAG_01375":null,"SJAG_01400":null,"SJAG_01404":null,"SJAG_01414":null,"SJAG_01418":null,"SJAG_01430":null,"SJAG_01450":null,"SJAG_01457":null,"SJAG_01498":null,"SJAG_01507":null,"SJAG_01511":null,"SJAG_01533":null,"SJAG_01535":null,"SJAG_01542":null,"SJAG_01560":null,"SJAG_01572":null,"SJAG_01574":null,"SJAG_01593":null,"SJAG_01600":null,"SJAG_01626":null,"SJAG_01630":null,"SJAG_01637":null,"SJAG_01648":null,"SJAG_01665":null,"SJAG_01672":null,"SJAG_01673":null,"SJAG_01677":null,"SJAG_01684":null,"SJAG_01686":null,"SJAG_01694":null,"SJAG_01702":null,"SJAG_01715":null,"SJAG_01731":null,"SJAG_01734":null,"SJAG_01740":null,"SJAG_01760":null,"SJAG_01765":null,"SJAG_01772":null,"SJAG_01776":null,"SJAG_01797":null,"SJAG_01832":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_01875":null,"SJAG_01896":null,"SJAG_01929":null,"SJAG_01930":null,"SJAG_01945":null,"SJAG_01948":null,"SJAG_01955":null,"SJAG_01992":null,"SJAG_01996":null,"SJAG_01997":null,"SJAG_02003":null,"SJAG_02007":null,"SJAG_02019":null,"SJAG_02043":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02080":null,"SJAG_02096":null,"SJAG_02107":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02169":null,"SJAG_02203":null,"SJAG_02206":null,"SJAG_02215":null,"SJAG_02247":null,"SJAG_02261":null,"SJAG_02290":null,"SJAG_02298":null,"SJAG_02299":null,"SJAG_02319":null,"SJAG_02347":null,"SJAG_02349":null,"SJAG_02369":null,"SJAG_02370":null,"SJAG_02397":null,"SJAG_02399":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02435":null,"SJAG_02447":null,"SJAG_02459":null,"SJAG_02461":null,"SJAG_02503":null,"SJAG_02511":null,"SJAG_02521":null,"SJAG_02532":null,"SJAG_02539":null,"SJAG_02569":null,"SJAG_02575":null,"SJAG_02582":null,"SJAG_02583":null,"SJAG_02587":null,"SJAG_02589":null,"SJAG_02627":null,"SJAG_02629":null,"SJAG_02648":null,"SJAG_02668":null,"SJAG_02689":null,"SJAG_02691":null,"SJAG_02694":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02734":null,"SJAG_02746":null,"SJAG_02752":null,"SJAG_02763":null,"SJAG_02766":null,"SJAG_02786":null,"SJAG_02794":null,"SJAG_02796":null,"SJAG_02808":null,"SJAG_02847":null,"SJAG_02851":null,"SJAG_02897":null,"SJAG_02903":null,"SJAG_02908":null,"SJAG_02938":null,"SJAG_02954":null,"SJAG_02956":null,"SJAG_02963":null,"SJAG_03005":null,"SJAG_03006":null,"SJAG_03018":null,"SJAG_03022":null,"SJAG_03029":null,"SJAG_03032":null,"SJAG_03044":null,"SJAG_03051":null,"SJAG_03071":null,"SJAG_03088":null,"SJAG_03090":null,"SJAG_03096":null,"SJAG_03103":null,"SJAG_03112":null,"SJAG_03140":null,"SJAG_03142":null,"SJAG_03153":null,"SJAG_03175":null,"SJAG_03180":null,"SJAG_03183":null,"SJAG_03191":null,"SJAG_03196":null,"SJAG_03222":null,"SJAG_03225":null,"SJAG_03227":null,"SJAG_03231":null,"SJAG_03240":null,"SJAG_03250":null,"SJAG_03254":null,"SJAG_03275":null,"SJAG_03276":null,"SJAG_03286":null,"SJAG_03303":null,"SJAG_03313":null,"SJAG_03322":null,"SJAG_03324":null,"SJAG_03326":null,"SJAG_03346":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03393":null,"SJAG_03396":null,"SJAG_03398":null,"SJAG_03405":null,"SJAG_03428":null,"SJAG_03430":null,"SJAG_03465":null,"SJAG_03496":null,"SJAG_03509":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03539":null,"SJAG_03562":null,"SJAG_03588":null,"SJAG_03599":null,"SJAG_03613":null,"SJAG_03615":null,"SJAG_03618":null,"SJAG_03626":null,"SJAG_03643":null,"SJAG_03657":null,"SJAG_03658":null,"SJAG_03665":null,"SJAG_03689":null,"SJAG_03695":null,"SJAG_03697":null,"SJAG_03723":null,"SJAG_03743":null,"SJAG_03744":null,"SJAG_03752":null,"SJAG_03755":null,"SJAG_03761":null,"SJAG_03771":null,"SJAG_03793":null,"SJAG_03811":null,"SJAG_03813":null,"SJAG_03822":null,"SJAG_03831":null,"SJAG_03850":null,"SJAG_03862":null,"SJAG_03866":null,"SJAG_03883":null,"SJAG_03886":null,"SJAG_03918":null,"SJAG_03930":null,"SJAG_03939":null,"SJAG_03943":null,"SJAG_03968":null,"SJAG_03974":null,"SJAG_03976":null,"SJAG_03983":null,"SJAG_03984":null,"SJAG_03985":null,"SJAG_04013":null,"SJAG_04016":null,"SJAG_04043":null,"SJAG_04048":null,"SJAG_04051":null,"SJAG_04054":null,"SJAG_04063":null,"SJAG_04080":null,"SJAG_04106":null,"SJAG_04129":null,"SJAG_04151":null,"SJAG_04183":null,"SJAG_04189":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04217":null,"SJAG_04233":null,"SJAG_04238":null,"SJAG_04242":null,"SJAG_04249":null,"SJAG_04292":null,"SJAG_04297":null,"SJAG_04336":null,"SJAG_04353":null,"SJAG_04362":null,"SJAG_04368":null,"SJAG_04373":null,"SJAG_04374":null,"SJAG_04403":null,"SJAG_04407":null,"SJAG_04410":null,"SJAG_04414":null,"SJAG_04425":null,"SJAG_04429":null,"SJAG_04434":null,"SJAG_04448":null,"SJAG_04449":null,"SJAG_04466":null,"SJAG_04487":null,"SJAG_04516":null,"SJAG_04533":null,"SJAG_04538":null,"SJAG_04553":null,"SJAG_04571":null,"SJAG_04574":null,"SJAG_04579":null,"SJAG_04619":null,"SJAG_04621":null,"SJAG_04641":null,"SJAG_04677":null,"SJAG_04679":null,"SJAG_04682":null,"SJAG_04712":null,"SJAG_04726":null,"SJAG_04743":null,"SJAG_04747":null,"SJAG_04757":null,"SJAG_04781":null,"SJAG_04788":null,"SJAG_04789":null,"SJAG_04842":null,"SJAG_04845":null,"SJAG_04859":null,"SJAG_04865":null,"SJAG_04882":null,"SJAG_04886":null,"SJAG_04896":null,"SJAG_04898":null,"SJAG_04901":null,"SJAG_04913":null,"SJAG_04915":null,"SJAG_04964":null,"SJAG_04966":null,"SJAG_04970":null,"SJAG_04972":null,"SJAG_04990":null,"SJAG_04991":null,"SJAG_05010":null,"SJAG_05012":null,"SJAG_05105":null,"SJAG_05118":null,"SJAG_05173":null,"SJAG_05200":null,"SJAG_05209":null,"SJAG_05234":null,"SJAG_05236":null,"SJAG_05242":null,"SJAG_05243":null,"SJAG_05245":null,"SJAG_05264":null,"SJAG_05273":null,"SJAG_05274":null,"SJAG_05311":null,"SJAG_05323":null,"SJAG_05337":null,"SJAG_05338":null,"SJAG_05343":null,"SJAG_05344":null,"SJAG_05345":null,"SJAG_05353":null,"SJAG_05373":null,"SJAG_05398":null,"SJAG_05679":null,"SJAG_06022":null,"SJAG_06576":null,"SJAG_06597":null,"SJAG_06599":null,"SJAG_06611":null,"SJAG_06636":null,"SJAG_06639":null,"SJAG_06642":null,"SJAG_MIT04":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"metal ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"heavy metal binding","type":"narrow"},{"name":"metal binding","type":"exact"}],"termid":"GO:0046872","terms_by_termid":{"GO:0000287":null,"GO:0005506":null,"GO:0005507":null,"GO:0005509":null,"GO:0008198":null,"GO:0008199":null,"GO:0008270":null,"GO:0016151":null,"GO:0030145":null,"GO:0030955":null,"GO:0046870":null,"GO:0046872":null,"GO:0046911":null,"GO:0046914":null}}


id: PR:O59711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.03 gene.","definition_xrefs":["UniProtKB:O59711","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase [NADP(+), L-glutamate-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.03","synonyms":[{"name":"Spom972h-SPBC3B8.03","type":"exact"},{"name":"saccharopine reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59711"}


id: GO:0050278
data:
  {"annotated_genes":["SJAG_03759"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73504],"is_not":false,"summary":null,"term":"GO:0050278"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sedoheptulose 1,7-bisphosphate + H2O = sedoheptulose 7-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.37","MetaCyc:SEDOHEPTULOSE-BISPHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03759":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"sedoheptulose-bisphosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:17461"],"synonyms":[{"name":"SBPase activity","type":"related"},{"name":"sedoheptulose 1,7-bisphosphatase activity","type":"related"},{"name":"sedoheptulose 1,7-diphosphatase activity","type":"related"},{"name":"sedoheptulose 1,7-diphosphate phosphatase activity","type":"related"},{"name":"sedoheptulose bisphosphatase activity","type":"related"},{"name":"sedoheptulose diphosphatase activity","type":"related"},{"name":"sedoheptulose-1,7-bisphosphatase activity","type":"related"},{"name":"sedoheptulose-1,7-bisphosphate 1-phosphohydrolase activity","type":"related"}],"termid":"GO:0050278","terms_by_termid":{"GO:0050278":null}}


id: GO:0160056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a macropinosome.","definition_xrefs":["PMID:19690049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"macropinosome","termid":"GO:0044354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"macropinosome membrane","termid":"GO:0160056"}


id: PBO:0059557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1A","termid":"PBO:0059557"}


id: FYPO:0000558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of re-entry into the mitotic cell cycle after pheromone arrest is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal re-entry into mitotic cell cycle after pheromone arrest","termid":"FYPO:0000555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased re-entry into mitotic cell cycle after pheromone arrest","synonyms":[{"name":"increased recovery from pheromone-induced cell cycle arrest","type":"exact"},{"name":"recovery from pheromone-induced cell cycle arrest: increased","type":"related"}],"termid":"FYPO:0000558"}


id: FYPO:0003870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the amount of protein encoded by genes normally induced by exposure to cadmium ions measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during G0","termid":"FYPO:0003866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of cadmium-induced proteins during G0","synonyms":[{"name":"increased level of cadmium-induced proteins during cell quiescence","type":"exact"},{"name":"increased level of cadmium-induced proteins during quiescence","type":"exact"},{"name":"increased level of proteins expressed during cellular response to cadmium during G0","type":"exact"},{"name":"increased level of proteins induced by cadmium during G0","type":"exact"},{"name":"increased protein level of genes (normally) induced during cadmium stress during G0","type":"exact"}],"termid":"FYPO:0003870"}


id: PBO:0091529
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RHO1","termid":"PBO:0091529"}


id: GO:0050184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z)-octadecenoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-lipid omega-6 desaturase (cytochrome b5) activity","secondary_identifiers":["GO:0102871","GO:0102857","GO:0102855","MetaCyc:RXN-9669","KEGG_REACTION:R03475","GO:0102860","GO:0102861","EC:1.14.19.22"],"synonyms":[{"name":"1-16:0-2-18:1-phosphatidylcholine desaturase activity","type":"narrow"},{"name":"1-18:1-2-18:2-phosphatidylcholine desaturase activity","type":"narrow"},{"name":"1-18:1-2-18:2-phosphatidylcholine synthase activity","type":"narrow"},{"name":"1-18:1-2-18:3-phosphatidylcholinedesaturase activity","type":"narrow"},{"name":"1-18:2-2-18:1-phosphatidylcholine desaturase activity (SN2-18:2 forming)","type":"narrow"},{"name":"1-acyl-2-oleoyl-sn-glycero-3-phosphocholine:NAD+ delta12-oxidoreductase activity","type":"related"},{"name":"linoleate synthase activity","type":"related"},{"name":"oleate desaturase activity","type":"related"},{"name":"oleoyl-CoA desaturase activity","type":"related"},{"name":"oleoylphosphatidylcholine desaturase activity","type":"related"},{"name":"phosphatidylcholine desaturase activity","type":"related"}],"termid":"GO:0050184"}


id: PATO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001149 susceptibility value (obsolete PATO:0001149)","termid":"PATO:0001149"}


id: FYPO:0001400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, and morphology of cytoplasmic microtubules is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytoplasmic microtubules during vegetative growth","termid":"FYPO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal interphase microtubules","synonyms":[{"name":"normal cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubules","type":"exact"},{"name":"normal interphase microtubules during mitotic cell cycle","type":"related"},{"name":"normal interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0001400"}


id: PR:O13940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A low specificity L-threonine aldolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01047","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low-specificity L-threonine aldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.09c","secondary_identifiers":["UniProtKB:O13940"],"synonyms":[{"name":"Spom972h-ltaE","type":"exact"}],"termid":"PR:O13940"}


id: GO:0140481
data:
  {"annotated_genes":["SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88483],"is_not":false,"summary":null,"term":"GO:0140481"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + iron-sulfur cluster(in) = ADP + phosphate + iron-sulfur cluster(out).","definition_xrefs":["PMID:31040179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type iron-sulfur cluster transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:3.A.1.210.1"],"synonyms":[{"name":"ATPase-coupled Fe-S cluster transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled iron-sulfur cluster transmembrane transporter activity","type":"related"}],"termid":"GO:0140481","terms_by_termid":{"GO:0140481":null}}


id: PBO:0089094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear/mitochondrial metal-dependent protein hydrolase, human MYG1 ortholog","termid":"PBO:0089094"}


id: MONDO:0010413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 95","secondary_identifiers":["GARD:22684","MESH:C567470","OMIM:300716","MEDGEN:394715","UMLS:C2678034"],"synonyms":[{"name":"MRX95","type":"exact"},{"name":"intellectual disability, X-linked 95","type":"exact"},{"name":"mental retardation, X-linked 95","type":"related"},{"name":"mental retardation, X-linked 95, X-linked dominant","type":"exact"}],"termid":"MONDO:0010413","xrefs":{"Monarch":{"xref_id":"0010413"}}}


id: PBO:0026690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tamoxifen","termid":"PBO:0026690"}


id: PR:G2TRJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cx9C motif-containing protein 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.22","synonyms":[{"name":"Spom972h-cmc4","type":"exact"},{"name":"transcripts altered in meiosis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ8"}


id: PBO:0049228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 2","termid":"PBO:0049228"}


id: GO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation or adhesion of compatible mating types via complementary cell-cell interactions during conjugation with cellular fusion of a unicellular organism. An example of this process is agglutination in Saccharomyces cerevisiae.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"is_a","term_name":"cell-cell adhesion in response to extracellular stimulus","termid":"GO:0140039"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0000747","GO:0007155","GO:0008150"],"is_obsolete":false,"name":"agglutination involved in conjugation with cellular fusion","secondary_identifiers":["GO:0007334"],"synonyms":[{"name":"agglutination","type":"broad"},{"name":"cell-cell adhesion during conjugation with cellular fusion","type":"exact"},{"name":"cell-cell adhesion during mating","type":"exact"}],"termid":"GO:0000752"}


id: PBO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Rrp8 (predicted)","termid":"PBO:0000795"}


id: PBO:0066539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 5","termid":"PBO:0066539"}


id: GO:0140093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An embryonic stem cell-specific SWI/SNF-type complex that contains eight or nine proteins, including both conserved (core) and nonconserved components; contains the ATPase product of either the SMARCA4/BAF190A/BRG1 gene, the mammalian ortholog of the yeast SNF2 gene, or an ortholog thereof. Compared to many other BAF complexes never contains ACTL6B/BAF53B, ARID1B/BAF250B, SMARCA2/BRM, SMARCC2/BAF170 or SMARCD3/BAF60C but contains PHF10/BAF45A, DPF2/BAF45D and possibly one of BCL7A/B/C.","definition_xrefs":["PMID:19279218","PMID:2620226","GOC:bhm","PMID:19279220","PMID:8804307","PMID:8895581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"esBAF complex","synonyms":[{"name":"embryonic stem cell-specific BAF complex","type":"exact"},{"name":"embryonic stem cell-specific SWI/SNF complex","type":"exact"}],"termid":"GO:0140093"}


id: MONDO:0010769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hairy ears, Y-linked","secondary_identifiers":["MESH:C564029","OMIM:425500","MEDGEN:374123","UMLS:C1839070"],"synonyms":[{"name":"hairy ears, Y-linked","type":"exact"},{"name":"hairy ears, Y-linked, Y-linked","type":"exact"},{"name":"hypertrichosis pinnae auris, Y-linked","type":"related"}],"termid":"MONDO:0010769","xrefs":{"Monarch":{"xref_id":"0010769"}}}


id: PBO:0068316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF14 pseudogene 4","termid":"PBO:0068316"}


id: MONDO:0030048
data:
  {"annotated_genes":["SJAG_04944"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84641],"is_not":false,"summary":null,"term":"MONDO:0030048"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"CPOX-related hereditary coproporphyria","termid":"MONDO:0800180"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0019142","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"harderoporphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618892","Orphanet:659672","UMLS:C0342859","MEDGEN:137981","MESH:C562816","icd11.foundation:1664486132"],"synonyms":[{"name":"HARDEROPORPHYRIA","type":"exact"},{"name":"HARPO","type":"exact"},{"name":"harderoporphyria","type":"exact"}],"termid":"MONDO:0030048","terms_by_termid":{"MONDO:0030048":null},"xrefs":{"Monarch":{"xref_id":"0030048"}}}


id: PBO:0041184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 8","termid":"PBO:0041184"}


id: PBO:0054691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2100","termid":"PBO:0054691"}


id: GO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem development, the biological process whose specific outcome is the progression of the meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem development","termid":"GO:0048509"}


id: GO:1902550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any lymphoid lineage cell migration into thymus that is involved in thymus epithelium morphogenesis.","definition_xrefs":["GOC:cvs","PMID:22342843","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid lineage cell migration into thymus","termid":"GO:0097535"},{"relation_name":"part_of","term_name":"thymus epithelium morphogenesis","termid":"GO:0097536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid lineage cell migration into thymus involved in thymus epithelium morphogenesis","synonyms":[{"name":"lymphoid lineage cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymus epithelium morphogenesis","type":"exact"}],"termid":"GO:1902550"}


id: PBO:0072232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 7","termid":"PBO:0072232"}


id: MONDO:1012426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy (limb-girdle), non-human animal","termid":"MONDO:1011803"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), chicken","secondary_identifiers":["OMIA:001621-9031"],"termid":"MONDO:1012426","xrefs":{"Monarch":{"xref_id":"1012426"}}}


id: GO:0043596
data:
  {"annotated_genes":["SJAG_03927","SJAG_03097","SJAG_00198","SJAG_02394","SJAG_00696","SJAG_02627","SJAG_00611","SJAG_01354","SJAG_02818","SJAG_04183","SJAG_01698","SJAG_00618","SJAG_03898","SJAG_03128","SJAG_03495","SJAG_00857","SJAG_05239","SJAG_03855","SJAG_02182","SJAG_00814","SJAG_00327","SJAG_04671","SJAG_01823","SJAG_00874","SJAG_01010","SJAG_02348","SJAG_04877","SJAG_02198","SJAG_04995","SJAG_02800","SJAG_00536","SJAG_00958","SJAG_02439","SJAG_02667","SJAG_04210","SJAG_00729","SJAG_04791","SJAG_04272","SJAG_03722","SJAG_02724","SJAG_05197","SJAG_05301","SJAG_02172","SJAG_04150","SJAG_01762","SJAG_00272","SJAG_00863","SJAG_00153","SJAG_05232","SJAG_00399","SJAG_04190","SJAG_02908","SJAG_04994","SJAG_00884","SJAG_03780","SJAG_02610","SJAG_02074","SJAG_01267","SJAG_04879","SJAG_03451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89649,89872,91157,91755,92185,94020,94262,95200,96520,98496,98612,99791,100681,102054,102131,102494,103159,103324,103393,105582,106402,106501,106885,106990,107204,109093,109366,110409,110527,110784,111039,111869,112286,112307,112694,114237,114406,114538,117307],"is_not":false,"summary":null,"term":"GO:0043596"},{"annotations":[96614,98603,116461,104487],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[104091,94427,102004,108255],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[110687,114653,115383],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[111959,106139,88779,93155,94460,111408],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[111645],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043601"},{"annotations":[107664,105789,98550],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031298"}]},"cv_name":"cellular_component","definition":"The Y-shaped region of a nuclear replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork","termid":"GO:0005657"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00198":null,"SJAG_00272":null,"SJAG_00327":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00611":null,"SJAG_00618":null,"SJAG_00696":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_00958":null,"SJAG_01010":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01698":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02198":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02439":null,"SJAG_02610":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02724":null,"SJAG_02800":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03097":null,"SJAG_03128":null,"SJAG_03451":null,"SJAG_03495":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04272":null,"SJAG_04671":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear replication fork","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043596","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0031298":null,"GO:0043596":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null}}


id: GO:0097240
data:
  {"annotated_genes":["SJAG_02837","SJAG_01538","SJAG_01263","SJAG_02737","SJAG_02698","SJAG_01777","SJAG_04142","SJAG_03449","SJAG_00727","SJAG_05196","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90545,88283,93802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140698"},{"annotations":[90546,88800,116075,101998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[78609,95910,110361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990683"},{"annotations":[105113,88970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070197"},{"annotations":[90552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140464"}]},"cv_name":"biological_process","definition":"The process in which chromatin is anchored to the nuclear envelope.","definition_xrefs":["PMID:31635174","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01745":null,"SJAG_01777":null,"SJAG_02698":null,"SJAG_02737":null,"SJAG_02837":null,"SJAG_03449":null,"SJAG_04142":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"chromosome attachment to the nuclear envelope","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"attachment of chromatin to nuclear envelope","type":"related"}],"termid":"GO:0097240","terms_by_termid":{"GO:0070197":null,"GO:0072766":null,"GO:0140464":null,"GO:0140698":null,"GO:1990683":null}}


id: PATO:0020002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population based upon genotypic composition that confers the capability for an organism to differentiate female gonads.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genotypic sex","termid":"PATO:0020000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female genotypic sex","termid":"PATO:0020002"}


id: PBO:0041107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"barttin CLCNK type accessory subunit beta","termid":"PBO:0041107"}


id: PBO:0075623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBF pathway regulator in golgi 1","termid":"PBO:0075623"}


id: GO:0030903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord development","termid":"GO:0030903"}


id: GO:0001526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Transfer of sulfate to a proteoglycan (a glycoprotein whose carbohydrate units are glycosaminoglycans) using 3'-phosphoadenyl sulfate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete proteoglycan sulfate transfer (obsolete GO:0001526)","synonyms":[{"name":"proteoglycan sulfate transfer","type":"exact"},{"name":"proteoglycan sulphate transfer","type":"exact"}],"termid":"GO:0001526"}


id: SO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Primary transcript region bordering trans-splice junction.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_site","synonyms":[{"name":"trans splice site","type":"exact"}],"termid":"SO:0001420"}


id: GO:1905177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a tracheary element.","definition_xrefs":["GO_REF:0000086","GOC:TermGenie","PMID:20659276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheary element differentiation","termid":"GO:1905177"}


id: PBO:0029897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_recombination_during_vegetative_growth","termid":"PBO:0029897"}


id: GO:0170004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lipoate from one side of a membrane to the other.","definition_xrefs":["PMID:20980265","PMID:25971966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"lipoate transmembrane transporter activity","termid":"GO:0170004"}


id: GO:0019057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts translation of mRNA into protein in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host translation","synonyms":[{"name":"host cell protein synthesis shutoff","type":"broad"},{"name":"modification by virus of host cell mRNA translation","type":"narrow"},{"name":"modulation by virus of host translation","type":"narrow"},{"name":"modulation of host translation by virus","type":"narrow"},{"name":"regulation of host mRNA translation","type":"exact"},{"name":"regulation of host translation","type":"exact"},{"name":"viral perturbation of host cell mRNA translation","type":"narrow"}],"termid":"GO:0019057"}


id: PR:O43033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- oms1 gene.","definition_xrefs":["UniProtKB:O43033","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C3B9.04, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.04","synonyms":[{"name":"Spom972h-oms1","type":"exact"}],"termid":"PR:O43033"}


id: MONDO:0012889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoidosis, susceptibility to, 3","secondary_identifiers":["MEDGEN:436693","UMLS:C2676467","OMIM:612388"],"synonyms":[{"name":"SS3","type":"exact"},{"name":"sarcoidosis, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0012889","xrefs":{"Monarch":{"xref_id":"0012889"}}}


id: GO:0008718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor.","definition_xrefs":["RHEA:18125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-amino-acid dehydrogenase activity","synonyms":[{"name":"D-amino-acid:(acceptor) oxidoreductase (deaminating)","type":"exact"},{"name":"D-amino-acid:acceptor oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0008718"}


id: MONDO:0001728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meniere disease","termid":"MONDO:0007972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active vestibular Meniere disease","secondary_identifiers":["MEDGEN:509991","DOID:13491","ICD9:386.03","SCTID:194350005","UMLS:C0155498"],"synonyms":[{"name":"active Meniere's disease, vestibular","type":"exact"},{"name":"active vestibular Meniere disease","type":"exact"},{"name":"active vestibular Meniere's disease","type":"exact"},{"name":"vestibular active Mnire's disease","type":"exact"}],"termid":"MONDO:0001728","xrefs":{"Monarch":{"xref_id":"0001728"}}}


id: PBO:0053235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 1","termid":"PBO:0053235"}


id: GO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gene conversion process in which a segment of about 50-200 base pairs is transferred from the donor to the acceptor.","definition_xrefs":["GOC:mah","PMID:16954385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"short tract gene conversion","termid":"GO:0035823"}


id: PBO:0057551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 664b","termid":"PBO:0057551"}


id: PBO:0012855
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in sister chromatid disjoining","termid":"PBO:0012855"}


id: GO:1990953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of vesicles and protein complexes carried out by molecular motors, kinesins and dynein, along the microtubule tracks within the manchette and by myosin along actin filaments.","definition_xrefs":["PMID:26792866","GOC:krc","PMID:22319670","PMID:24440897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"intramanchette transport","synonyms":[{"name":"IMT","type":"related"}],"termid":"GO:1990953"}


id: PBO:0050811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUS1 checkpoint clamp component B","termid":"PBO:0050811"}


id: FYECO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium where the medium contained trace amounts of glucose (<0.1%).","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YE with trace glucose","synonyms":[{"name":"rich medium with trace glucose","type":"exact"},{"name":"very low glucose YE","type":"exact"}],"termid":"FYECO:0000429"}


id: SO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a transcript with stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_read_through","termid":"SO:0000883"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_read_through","synonyms":[{"name":"gene with stop codon read through","type":"exact"}],"termid":"SO:0000697"}


id: GO:0003921
data:
  {"annotated_genes":["SJAG_04634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100380],"is_not":false,"summary":null,"term":"GO:0003921"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + XMP + NH4(+) = AMP + diphosphate + GMP + 2H+.","definition_xrefs":["RHEA:18301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"part_of","term_name":"GMP synthase (glutamine-hydrolyzing) activity","termid":"GO:0003922"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"part_of","termid":"GO:0003824"},{"rel_name":"part_of","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"GMP synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GMP-SYN-NH3-RXN"],"termid":"GO:0003921","terms_by_termid":{"GO:0003921":null}}


id: PBO:0034290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_end_location","termid":"PBO:0034290"}


id: PBO:0027489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_during_G0","termid":"PBO:0027489"}


id: PR:000027608
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of replication checkpoint protein 1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:14585996","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediator of replication checkpoint protein 1","termid":"PR:000027605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of replication checkpoint protein 1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC694.06c","synonyms":[{"name":"Spom-mrc1/UnMod","type":"exact"}],"termid":"PR:000027608"}


id: PBO:0090589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MIB complex subunit, human DNAJC11 ortholog","termid":"PBO:0090589"}


id: PBO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_multiseptate_vegetative_cell,_single_septa_between_nuclei","termid":"PBO:0030366"}


id: GO:0045727
data:
  {"annotated_genes":["SJAG_01436","SJAG_02723","SJAG_05265","SJAG_02189","SJAG_02043","SJAG_01517","SJAG_01249","SJAG_03550","SJAG_01047","SJAG_04959","SJAG_02812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87779,105813,116260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[97902,111804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[101095,99644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[108314,108315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[100194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[94003,108317,108316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"translation","termid":"GO:0006412"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01047":null,"SJAG_01249":null,"SJAG_01436":null,"SJAG_01517":null,"SJAG_02043":null,"SJAG_02189":null,"SJAG_02723":null,"SJAG_02812":null,"SJAG_03550":null,"SJAG_04959":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0045946"],"synonyms":[{"name":"activation of protein biosynthetic process","type":"narrow"},{"name":"positive regulation of protein anabolism","type":"exact"},{"name":"positive regulation of protein biosynthesis","type":"exact"},{"name":"positive regulation of protein biosynthetic process","type":"exact"},{"name":"positive regulation of protein formation","type":"exact"},{"name":"positive regulation of protein synthesis","type":"exact"},{"name":"stimulation of protein biosynthetic process","type":"narrow"},{"name":"up regulation of protein biosynthetic process","type":"exact"},{"name":"up-regulation of protein biosynthetic process","type":"exact"},{"name":"upregulation of protein biosynthetic process","type":"exact"}],"termid":"GO:0045727","terms_by_termid":{"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070131":null,"GO:0070134":null,"GO:2000767":null}}


id: PBO:0069086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 333, pseudogene","termid":"PBO:0069086"}


id: MONDO:1010063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hypoplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism, non-human animal","termid":"MONDO:1010276"},{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital adrenal hypoplasia, non-human animal","secondary_identifiers":["OMIA:002060"],"termid":"MONDO:1010063","xrefs":{"Monarch":{"xref_id":"1010063"}}}


id: PBO:0087995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tryptophan synthase; catalyzes the last step of tryptophan biosynthesis; regulated by the general control system of amino acid biosynthesis","termid":"PBO:0087995"}


id: MONDO:0000070
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86563],"is_not":false,"summary":null,"term":"MONDO:0000070"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"is_obsolete":false,"name":"Mycobacterium tuberculosis, susceptibility","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536092","OMIM:607948"],"synonyms":[{"name":"Mycobacterium tuberculosis, susceptibility to","type":"exact"},{"name":"Mycobacterium tuberculosis, susceptibility to infection by","type":"exact"},{"name":"tuberculosis, susceptibility to","type":"broad"}],"termid":"MONDO:0000070","terms_by_termid":{"MONDO:0000070":null},"xrefs":{"Monarch":{"xref_id":"0000070"}}}


id: PBO:0059124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPDU1 antisense RNA 1","termid":"PBO:0059124"}


id: GO:0035881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an amacrine cell, an interneuron generated in the inner nuclear layer (INL) of the vertebrate retina. Amacrine cells integrate, modulate, and interpose a temporal domain in the visual message presented to the retinal ganglion cells, with which they synapse in the inner plexiform layer. Amacrine cells lack large axons.","definition_xrefs":["CL:0000561","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amacrine cell differentiation","synonyms":[{"name":"amacrine neuron differentiation","type":"exact"}],"termid":"GO:0035881"}


id: MONDO:0001386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clinical or subclinical disturbances of cortical function due to a sudden, abnormal, excessive, and disorganized discharge of brain cells. Clinical manifestations include abnormal motor, sensory and psychic phenomena. Recurrent seizures are usually referred to as epilepsy or 'seizure disorder.'","definition_xrefs":["MESH:D012640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual cortex disorder","termid":"MONDO:0003584"},{"relation_name":"is_a","term_name":"reflex epilepsy","termid":"MONDO:0017768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"visual epilepsy","secondary_identifiers":["UMLS:C0270824","MEDGEN:75723","DOID:11832","NCIT:C3980","SCTID:39194005"],"synonyms":[{"name":"epilepsy, visual","type":"exact"}],"termid":"MONDO:0001386","xrefs":{"Monarch":{"xref_id":"0001386"}}}


id: GO:2000884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glucomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"glucomannan metabolic process","termid":"GO:0010391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucomannan catabolic process","synonyms":[{"name":"glucomannan catabolism","type":"exact"}],"termid":"GO:2000884"}


id: MONDO:0003534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic adenocarcinoma, characterized by a papillary growth pattern. There are only a few published cases, and no good data regarding prognosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"thymus gland adenocarcinoma","termid":"MONDO:0003209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"papillary thymic adenocarcinoma","secondary_identifiers":["UMLS:C1335327","DOID:5595","NCIT:C27937","MEDGEN:233836"],"synonyms":[{"name":"Thymus papillary carcinoma","type":"exact"},{"name":"papillary carcinoma of Thymus","type":"exact"},{"name":"papillary carcinoma of the Thymus","type":"exact"},{"name":"thymic papillary adenocarcinoma","type":"exact"},{"name":"thymic papillary carcinoma","type":"exact"},{"name":"thymus papillary adenocarcinoma","type":"exact"}],"termid":"MONDO:0003534","xrefs":{"Monarch":{"xref_id":"0003534"}}}


id: GO:0106364
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102416],"is_not":false,"summary":null,"term":"GO:0106364"}]},"cv_name":"molecular_function","definition":"4-hydroxy-3-all-trans-hexaprenylbenzoate + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = 3,4-dihydroxy-5-all-trans-hexaprenylbenzoate + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:20361","PMID:21944752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-3-all-trans-hexaprenylbenzoate oxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3O-58"],"termid":"GO:0106364","terms_by_termid":{"GO:0106364":null}}


id: PBO:0043901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein 1","termid":"PBO:0043901"}


id: PBO:0038783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacylase 1","termid":"PBO:0038783"}


id: FYPO:0008272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3 binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type). The affected gene product may be encoded by the mutated gene, or by a different gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone binding","termid":"FYPO:0008271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3 binding","termid":"FYPO:0008272"}


id: PBO:0051145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-23","termid":"PBO:0051145"}


id: FYPO:0000062
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118334,118336,118329,118251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003779"},{"annotations":[118564,118561,118573,118568,118560,118576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001556"},{"annotations":[118401],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology","termid":"FYPO:0002256"},{"relation_name":"output_of","term_name":"abnormal nucleus organization","termid":"FYPO:0000810"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03940":null,"SJAG_04464":null},"genotype_count":11,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nuclear morphology during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null},"secondary_identifiers":["FYPO:0000259"],"single_locus_annotated_genes":["SJAG_01745","SJAG_03449","SJAG_01906","SJAG_02763","SJAG_04464","SJAG_03940"],"single_locus_genotype_uniquenames":["ned1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1delta","lem2delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","nem2delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal nuclear morphology during mitotic cell cycle","type":"related"},{"name":"deformed nucleus during vegetative growth","type":"exact"},{"name":"nuclear morphology defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000062","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO_EXT:0000001":null}}


id: PBO:0014576
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens CLNS1A","termid":"PBO:0014576"}


id: GO:0062102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a female germline stem cell to produce two germline stem cells of the same type as the parent.","definition_xrefs":["GOC:ha","PMID:30248087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell symmetric division","termid":"GO:0098729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germline stem cell symmetric division","termid":"GO:0062102"}


id: MONDO:0100088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete late-onset familial alzheimer disease (obsolete MONDO:0100088)","termid":"MONDO:0100088","xrefs":{"Monarch":{"xref_id":"0100088"}}}


id: GO:0042043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurexin, a synaptic cell surface protein related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals.","definition_xrefs":["GOC:curators","GOC:pr","PMID:18923512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neurexin family protein binding","secondary_identifiers":["GO:0019963"],"synonyms":[{"name":"neuroligin","type":"related"}],"termid":"GO:0042043"}


id: MOD:00165
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 1'-mannosyl-L-tryptophan.","definition_xrefs":["PubMed:16150691","PubMed:1482345","RESID:AA0156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"1'-mannosyl-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(1-D-mannopyranosyloxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"1'-glycosyl-L-tryptophan","type":"exact"},{"name":"1'-mannosyl-L-tryptophan","type":"exact"},{"name":"CARBOHYD N-linked (Man) tryptophan","type":"exact"},{"name":"N-mannosyl-tryptophan","type":"exact"},{"name":"N1'ManTrp","type":"exact"},{"name":"N1-mannosyl-tryptophan","type":"exact"}],"termid":"MOD:00165"}


id: GO:0034878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisonicotinate + acceptor + H2O = citrazinate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisonicotinate dehydrogenase activity (obsolete GO:0034878)","termid":"GO:0034878"}


id: PBO:0046189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 3","termid":"PBO:0046189"}


id: GO:0060204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted glutamate transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted glutamate transport vesicle","termid":"GO:0060199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted glutamate transport vesicle lumen","synonyms":[{"name":"clathrin sculpted glutamate constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted glutamate transport vesicle lumen","type":"exact"}],"termid":"GO:0060204"}


id: MONDO:1010074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XII deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XII deficiency, non-human animal","secondary_identifiers":["OMIA:000364"],"termid":"MONDO:1010074","xrefs":{"Monarch":{"xref_id":"1010074"}}}


id: PR:O74865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dph7 gene.","definition_xrefs":["UniProtKB:O74865","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.15","synonyms":[{"name":"Spom972h-dph7","type":"exact"},{"name":"WD repeat-containing protein rrt2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"diphthamide biosynthesis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74865"}


id: RO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"},{"relation_name":"is_a","term_name":"has_host","termid":"RO:0002454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasite_of","synonyms":[{"name":"direct parasite of","type":"exact"}],"termid":"RO:0002444"}


id: FYPO:0008064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal after phosphate removal.","definition_xrefs":["PMID:36779416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased mating efficiency during phosphate starvation","termid":"FYPO:0008064"}


id: MONDO:0032907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 8","secondary_identifiers":["MEDGEN:1684767","UMLS:C5231496","OMIM:618773"],"synonyms":[{"name":"LMPHM8","type":"related"},{"name":"LYMPHATIC MALFORMATION 8","type":"related"}],"termid":"MONDO:0032907","xrefs":{"Monarch":{"xref_id":"0032907"}}}


id: MONDO:0019620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital esophageal diverticulum is a rare, non-syndromic malformation of the esophagus, present at birth, and characterized by a false diverticulum, most often located in the upper, posterior esophagus. Many patients are asymptomatic, but respiratory distress, food regurgitation, dysphagia, chest pain, aspiration pneumonia and discomfort are typical presenting manifestations.","definition_xrefs":["Orphanet:91358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital esophageal diverticulum","secondary_identifiers":["ICD9:750.4","icd11.foundation:42183618","MEDGEN:539704","UMLS:C0266133","SCTID:204667006","GARD:19165"],"synonyms":[{"name":"congenital esophageal pouch","type":"exact"}],"termid":"MONDO:0019620","xrefs":{"Monarch":{"xref_id":"0019620"}}}


id: MONDO:0015068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the rectum.","definition_xrefs":["NCIT:C135213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"rectum neuroendocrine neoplasm","termid":"MONDO:0003646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal neuroendocrine tumor","synonyms":[{"name":"neuroendocrine tumor of rectum, well differentiated, low or intermediate grade","type":"exact"},{"name":"rectal well differentiated neuroendocrine neoplasm","type":"exact"},{"name":"rectal well-differentiated neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0015068","xrefs":{"Monarch":{"xref_id":"0015068"}}}


id: PBO:0111899
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain","termid":"PBO:0111899"}


id: GO:1905782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","PMID:17401362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid translocation","termid":"GO:0061092"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine exposure on apoptotic cell surface","termid":"GO:1905780"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"activation of externalization of phosphatidylserine","type":"narrow"},{"name":"activation of phosphatidylserine exposure on apoptotic cell surface","type":"narrow"},{"name":"positive regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"up-regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up-regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"upregulation of externalization of phosphatidylserine","type":"exact"},{"name":"upregulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"}],"termid":"GO:1905782"}


id: MONDO:0044225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete creatine kinase, brain type, ectopic expression of (obsolete MONDO:0044225)","secondary_identifiers":["HGNC:1992"],"synonyms":[{"name":"CKBE","type":"related"},{"name":"creatine KINASE, brain type, ectopic expression OF","type":"related"}],"termid":"MONDO:0044225","xrefs":{"Monarch":{"xref_id":"0044225"}}}


id: PBO:0111926
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide matMc","termid":"PBO:0111926"}


id: RO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relation groups causal relations between material entities and causal relations between processes","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_dependence_to","termid":"RO:0002609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_related_to","termid":"RO:0002410"}


id: GO:0009467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monoheme class I cytochrome c (obsolete GO:0009467)","synonyms":[{"name":"monoheme class I cytochrome c","type":"exact"}],"termid":"GO:0009467"}


id: GO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an elaioplast, a leucoplast in which oil is stored.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast organization","termid":"GO:0009659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elaioplast organization","synonyms":[{"name":"elaioplast organisation","type":"exact"},{"name":"elaioplast organization and biogenesis","type":"related"}],"termid":"GO:0043579"}


id: MONDO:0006022
data:
  {"annotated_genes":["SJAG_00516","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[85364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"}]},"cv_name":"mondo","definition":"An abnormally high acidity of the blood and other body tissues. Acidosis can be either respiratory or metabolic.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hematologic disorder","termid":"MONDO:0005570"},{"relation_name":"is_a","term_name":"disorder of acid-base balance","termid":"MONDO:0041261"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acidosis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0001941","EFO:1000014","ICD9:276.2","MEDGEN:1296","SCTID:51387008","UMLS:C0001122"],"synonyms":[{"name":"acidosis","type":"exact"}],"termid":"MONDO:0006022","terms_by_termid":{"MONDO:0011268":null,"MONDO:0011422":null},"xrefs":{"Monarch":{"xref_id":"0006022"}}}


id: MONDO:0010228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked nonsyndromic hearing loss","termid":"MONDO:0019586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, X-linked 3","secondary_identifiers":["DOID:0111736","MESH:C564727","MEDGEN:854758","OMIM:300030","GARD:18095","UMLS:C3888089"],"synonyms":[{"name":"DFNX3","type":"narrow"},{"name":"deafness X-linked, DFN3","type":"narrow"},{"name":"deafness, X-linked 3","type":"narrow"},{"name":"deafness, X-linked 4, congenital sensorineural","type":"narrow"}],"termid":"MONDO:0010228","xrefs":{"Monarch":{"xref_id":"0010228"}}}


id: PBO:0084107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haze-protective mannoprotein; reduces particle size of aggregated proteins in white wines, thereby decreasing turbidity; intragenic repeat expansion controls chronological aging; expansion of intragenic tandem repeats within N-terminus sufficient to cause pronounced life span shortening; repeat expansion shifts cells from sedentary to buoyant, thereby increasing exposure to oxygen, altering methionine, lipid, and purine metabolism","termid":"PBO:0084107"}


id: PBO:0039361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 3","termid":"PBO:0039361"}


id: PBO:0034519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_elongated_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034519"}


id: PBO:0003899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of mRNA decapping Edc3 (predicted)","termid":"PBO:0003899"}


id: MONDO:0010325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Stocco dos Santos type","secondary_identifiers":["UMLS:C1845530","OMIM:300434","MESH:C537495","SCTID:718910006","Orphanet:85288","DOID:0112126","MEDGEN:335202","GARD:1133"],"synonyms":[{"name":"SDSX","type":"related"},{"name":"Sdsx","type":"related"},{"name":"Stocco DOS Santos X-linked intellectual disability syndrome","type":"related"},{"name":"Stocco DOS Santos X-linked mental retardation syndrome","type":"related"},{"name":"Stocco dos Santos syndrome","type":"related"},{"name":"intellectual developmental disorder, X-linked syndromic, Stocco dos Santos type","type":"exact"},{"name":"intellectual disability, Stocco dos Santos type","type":"related"},{"name":"intellectual disability, X-linked, Stocco Dos Santos type","type":"related"},{"name":"mental retardation, Stocco dos Santos type","type":"related"},{"name":"mental retardation, X-linked, Stocco Dos Santos type","type":"related"}],"termid":"MONDO:0010325","xrefs":{"Monarch":{"xref_id":"0010325"}}}


id: PBO:0068887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 128, pseudogene","termid":"PBO:0068887"}


id: MONDO:0016807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pure mitochondrial myopathy is a rare mitochondrial disease characterized by exclusive skeletal muscle involvement, without clinical evidence of other organ involvement, manifesting with progressive limb weakness, proximal limb muscle atrophy, and eye muscle anomalies (e.g. ocular motility restriction, ptosis). Patients may present with lactic acidosis, diffuse myalgia and overall fatigability (particularly during/after physical activities), dysphagia, and diminished deep tendon reflexes.","definition_xrefs":["Orphanet:254854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pure mitochondrial myopathy","secondary_identifiers":["SCTID:732245008","UMLS:C4517289","GARD:20768","icd11.foundation:141365898","MEDGEN:1375079"],"termid":"MONDO:0016807","xrefs":{"Monarch":{"xref_id":"0016807"}}}


id: GO:0002135
data:
  {"annotated_genes":["SJAG_03453","SJAG_02288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86950,90060],"is_not":false,"summary":null,"term":"GO:0002135"}]},"cv_name":"molecular_function","definition":"Binding to CTP, cytidine 5'-triphosphate.","definition_xrefs":["ISBN:0124020607","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide binding","termid":"GO:0032557"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02288":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CTP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002135","terms_by_termid":{"GO:0002135":null}}


id: FYPO:0002290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002290"}


id: PBO:0074137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A2","termid":"PBO:0074137"}


id: PBO:0047887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(6)(p23)","termid":"PBO:0047887"}


id: GO:0039574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host TYK2 (tyrosine kinase 2). TYK2 is an intracellular signal-transducing tyrosine kinase involved in numerous cytokines and interferons signaling pathways and transmits the cytokine signal by phosphorylating receptor subunits.","definition_xrefs":["PMID:16987978","PMID:19085955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of host TYK2 activity","secondary_identifiers":["VZ:720"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host non-receptor tyrosine-protein kinase TYK2 activity","type":"narrow"}],"termid":"GO:0039574"}


id: PBO:0086832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function, potential Cdc28p substrate; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YGR035C has a paralog, YLR346C, that arose from the whole genome duplication","termid":"PBO:0086832"}


id: PBO:0087663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the import motor (PAM complex); the PAM complex is a  component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); forms a 1:1 subcomplex with Pam18p and inhibits its cochaperone activity; contains a J-like domain","termid":"PBO:0087663"}


id: PBO:0041501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 75","termid":"PBO:0041501"}


id: FYPO:0002668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002668"}


id: PBO:0069688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 967, pseudogene","termid":"PBO:0069688"}


id: GO:0045802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the organization, biogenesis or maintenance of the cytoskeleton.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytoskeleton (obsolete GO:0045802)","synonyms":[{"name":"negative regulation of cytoskeleton","type":"exact"}],"termid":"GO:0045802"}


id: PR:O36021
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CCAAT/enhancer-binding protein zeta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12048:SF0","OMA:SCHPO02012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.09c","secondary_identifiers":["UniProtKB:O36021"],"synonyms":[{"name":"Spom972h-CEBPZ","type":"exact"}],"termid":"PR:O36021"}


id: MONDO:0020584
data:
  {"annotated_genes":["SJAG_00605","SJAG_02009","SJAG_04192","SJAG_04334","SJAG_04495","SJAG_02796","SJAG_02297","SJAG_00839","SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[84687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[84906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[86294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[85410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[85692,85693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[84827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[85019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Any form of anemia that results from the absence of, or the defective action of, any enzyme.","definition_xrefs":["NCIT:C35472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia due to enzyme disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:105411","UMLS:C0494226"],"synonyms":[{"name":"anemia due to enzyme disorder","type":"exact"}],"termid":"MONDO:0020584","terms_by_termid":{"MONDO:0009113":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0014221":null},"xrefs":{"Monarch":{"xref_id":"0020584"}}}


id: GO:0140826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of zinc from one side of a membrane to the other according to the reaction: H+(out) + Zn2+(in) = H+(in) + Zn2+(out).","definition_xrefs":["PMID:30893306","PMID:19366695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"zinc:proton antiporter activity","termid":"GO:0140826"}


id: PBO:0044499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystin 1","termid":"PBO:0044499"}


id: GO:0030637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of derivatives of acetic acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate derivative catabolic process (obsolete GO:0030637)","synonyms":[{"name":"acetate derivative breakdown","type":"exact"},{"name":"acetate derivative catabolic process","type":"exact"},{"name":"acetate derivative catabolism","type":"exact"},{"name":"acetate derivative degradation","type":"exact"}],"termid":"GO:0030637"}


id: GO:0006678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glucosylceramide metabolic process","synonyms":[{"name":"glucosylceramide metabolism","type":"exact"}],"termid":"GO:0006678"}


id: MONDO:0025130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An enterovirus infection of swine clinically indistinguishable from foot-and-mouth disease, vesicular stomatitis, and vesicular exanthema of swine. It is caused by a strain of human enterovirus B.","definition_xrefs":["MESH:D013555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"enterovirus infectious disease, non-human animal","termid":"MONDO:0700210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swine vesicular disease","synonyms":[{"name":"swine vesicular diseases","type":"related"},{"name":"vesicular disease, swine","type":"related"},{"name":"vesicular diseases, swine","type":"related"}],"termid":"MONDO:0025130","xrefs":{"Monarch":{"xref_id":"0025130"}}}


id: GO:0046269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene-4-sulfonate, 4-methylbenzenesulfonate, the anion of sulfonic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"toluene-4-sulfonate metabolic process","termid":"GO:0018972"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"toluene-4-sulfonate catabolic process","synonyms":[{"name":"4-toluenesulfonate catabolic process","type":"exact"},{"name":"4-toluenesulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate breakdown","type":"exact"},{"name":"toluene-4-sulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate degradation","type":"exact"},{"name":"toluene-4-sulphonate catabolic process","type":"exact"},{"name":"toluene-4-sulphonate catabolism","type":"exact"}],"termid":"GO:0046269"}


id: PBO:0075304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 2","termid":"PBO:0075304"}


id: GO:0005042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a netrin signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:dph","PMID:15960985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"netrin receptor activity","termid":"GO:0005042"}


id: PBO:0026988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nigericin","termid":"PBO:0026988"}


id: GO:1905920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CoA-transferase activity.","definition_xrefs":["PMID:20164328","GO_REF:0000059","GOC:aruk","GOC:TermGenie","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of CoA-transferase activity","termid":"GO:1905918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CoA-transferase activity","synonyms":[{"name":"activation of CoA-transferase activity","type":"narrow"},{"name":"up regulation of CoA-transferase activity","type":"exact"},{"name":"up-regulation of CoA-transferase activity","type":"exact"},{"name":"upregulation of CoA-transferase activity","type":"exact"}],"termid":"GO:1905920"}


id: GO:0021748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal cochlear nucleus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000021","GOC:curators","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cochlear nucleus development","termid":"GO:0021747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal cochlear nucleus development","termid":"GO:0021748"}


id: GO:1900189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"positively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"activation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"activation of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"positive regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"up-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"upregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"upregulation of cell adhesion involved in single-species biofilm formation","type":"exact"}],"termid":"GO:1900189"}


id: MONDO:0008526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"talonavicular coalition","secondary_identifiers":["OMIM:186750","UMLS:C1861296","MESH:C536895","MEDGEN:350002"],"synonyms":[{"name":"talonavicular coalition","type":"exact"}],"termid":"MONDO:0008526","xrefs":{"Monarch":{"xref_id":"0008526"}}}


id: FYPO:0003904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal plasma membrane morphology","synonyms":[{"name":"normal plasma membrane morphology during mitotic cell cycle","type":"related"},{"name":"normal plasma membrane morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0003904"}


id: MONDO:0013942
data:
  {"annotated_genes":["SJAG_03440"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86455],"is_not":false,"summary":null,"term":"MONDO:0013942"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX16 defect","termid":"MONDO:0100269"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0005244","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 8A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553959","DOID:0080483","GARD:15869","MEDGEN:766873","OMIM:614876"],"synonyms":[{"name":"PBD8A","type":"related"},{"name":"peroxisome biogenesis disorder 8A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 9","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group D","type":"related"}],"termid":"MONDO:0013942","terms_by_termid":{"MONDO:0013942":null},"xrefs":{"Monarch":{"xref_id":"0013942"}}}


id: PBO:0034200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_ubiquitination","termid":"PBO:0034200"}


id: PBO:0044855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 136","termid":"PBO:0044855"}


id: MONDO:0017830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe Canavan disease (CD) is a rapidly progressing neurodegenerative disorder characterized by leukodystrophy with macrocephaly, severe developmental delay and hypotonia.","definition_xrefs":["Orphanet:314911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Canavan disease","termid":"MONDO:0010079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"severe Canavan disease","secondary_identifiers":["GARD:17437","UMLS:C5575558","MEDGEN:1826002"],"synonyms":[{"name":"infantile Canavan disease","type":"exact"},{"name":"neonatal Canavan disease","type":"exact"}],"termid":"MONDO:0017830","xrefs":{"Monarch":{"xref_id":"0017830"}}}


id: PBO:0003767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid-CoA ligase Lcf1","termid":"PBO:0003767"}


id: FYPO:0006394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which localization of the meiotic spindle is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0000138","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic spindle localization","synonyms":[{"name":"abnormal establishment of meiotic spindle localization","type":"exact"},{"name":"abnormal meiotic spindle localisation","type":"exact"},{"name":"abnormal spindle localization during meiosis","type":"exact"},{"name":"abnormal spindle localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006394"}


id: GO:0072382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"minus-end-directed organelle transport along microtubule","termid":"GO:0072385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"minus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule minus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072382"}


id: PBO:0039146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 3","termid":"PBO:0039146"}


id: PBO:0060770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5 pseudogene 1","termid":"PBO:0060770"}


id: PBO:0085927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; identical to Pau21p; encodes two proteins that are translated from two different start codons","termid":"PBO:0085927"}


id: PBO:0073993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3","termid":"PBO:0073993"}


id: GO:2000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034183"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:2000718"},{"relation_name":"negatively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:0071960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"negative regulation of maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"negative regulation of maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:2000719"}


id: GO:0042705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a photoreceptor cell found in the ocellus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}


id: MONDO:0016443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired form of collagenoma that appears in childhood. It is characterized by discrete, firm, skin-colored, and slightly elevated cutaneous papules, nodules or plaques that may be generalized, or found on the trunk and the extremities.","definition_xrefs":["NCIT:C4707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"papular elastorrhexis","secondary_identifiers":["MEDGEN:1813032","Orphanet:228264","GARD:20583","icd11.foundation:1231672259","SCTID:239138008","UMLS:C5680907"],"synonyms":[{"name":"Nevus anelasticus","type":"exact"},{"name":"disseminated nevus anelasticus","type":"exact"},{"name":"eruptive collagenoma","type":"exact"}],"termid":"MONDO:0016443","xrefs":{"Monarch":{"xref_id":"0016443"}}}


id: GO:0008209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"androgen metabolic process","synonyms":[{"name":"androgen metabolism","type":"exact"}],"termid":"GO:0008209"}


id: PBO:0028571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleotide-excision_repair_during_vegetative_growth","termid":"PBO:0028571"}


id: PBO:0004037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein (predicted)","termid":"PBO:0004037"}


id: GO:0032216
data:
  {"annotated_genes":["SJAG_00068"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88136],"is_not":false,"summary":null,"term":"GO:0032216"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glucosaminyl-phosphatidylinositol + fatty acyl-CoA = glucosaminyl-acyl-phasphotidylinositol + CoA.","definition_xrefs":["PMID:29484956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00068":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"glucosaminyl-phosphatidylinositol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-inositol acyltransferase","type":"related"},{"name":"glucosaminyl-phosphotidylinositol O-acyltransferase activity","type":"exact"}],"termid":"GO:0032216","terms_by_termid":{"GO:0032216":null}}


id: MONDO:0032564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hennekam syndrome","termid":"MONDO:0016256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hennekam lymphangiectasia-lymphedema syndrome 3","secondary_identifiers":["OMIM:618154","MEDGEN:1648368","GARD:16296","UMLS:C4748408"],"synonyms":[{"name":"HENNEKAM LYMPHANGIECTASIA-LYMPHEDEMA SYNDROME 3","type":"related"},{"name":"HKLLS3","type":"related"}],"termid":"MONDO:0032564","xrefs":{"Monarch":{"xref_id":"0032564"}}}


id: PBO:0042684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein gamma","termid":"PBO:0042684"}


id: FYPO:0005110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal sodium export","synonyms":[{"name":"normal cellular sodium export","type":"exact"},{"name":"normal sodium export during mitotic cell cycle","type":"related"},{"name":"normal sodium export during vegetative growth","type":"exact"},{"name":"normal sodium export from cell","type":"exact"},{"name":"normal sodium ion export","type":"exact"}],"termid":"FYPO:0005110"}


id: PBO:0027138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA/DNA_annealing_activity","termid":"PBO:0027138"}


id: MONDO:0016240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemimelia is a limb malformation characterized by the absence or gross shortening of the lower portion of one or more of the limbs. The condition is designated according to which bone of the distal arm or leg is absent or defective and includes fibular, radial, tibial, or ulnar hemimelia. Hemimelia ranges in severity.","definition_xrefs":["Orphanet:2130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hemimelia","secondary_identifiers":["UMLS:C0018987","MedDRA:10019464","SCTID:33076008","MEDGEN:9194","NCIT:C34674","GARD:18761"],"synonyms":[{"name":"longitudinal meromelia","type":"exact"}],"termid":"MONDO:0016240","xrefs":{"Monarch":{"xref_id":"0016240"}}}


id: MONDO:0006505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathological condition caused by impaired blood flow in the basal regions of cerebral hemispheres (basal ganglia), such as infarction; hemorrhage; or ischemia in vessels of this brain region including the lateral lenticulostriate arteries. Primary clinical manifestations include involuntary movements (dyskinesias) and muscle weakness (hemiparesis).","definition_xrefs":["MESH:D020144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal ganglia disorder","termid":"MONDO:0003996"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal ganglia cerebrovascular disorder","secondary_identifiers":["MEDGEN:148381","UMLS:C0751739","DOID:10991","EFO:1000640"],"synonyms":[{"name":"cerebrovascular disorder of collection of basal ganglia","type":"exact"},{"name":"collection of basal ganglia cerebrovascular disorder","type":"exact"}],"termid":"MONDO:0006505","xrefs":{"Monarch":{"xref_id":"0006505"}}}


id: PBO:0073535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing kinase binding protein 1","termid":"PBO:0073535"}


id: PBO:0056364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 1","termid":"PBO:0056364"}


id: MONDO:0009023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary motor and sensory neuropathy with agenesis of the corpus callosum (obsolete MONDO:0009023)","termid":"MONDO:0009023","xrefs":{"Monarch":{"xref_id":"0009023"}}}


id: PBO:0076810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM3 antisense transcript 1","termid":"PBO:0076810"}


id: GO:1903609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inward rectifier potassium channel activity.","definition_xrefs":["GO_REF:0000059","GOC:mtg_cardiac_conduct_nov11","GOC:BHF","PMID:18923542","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inward rectifier potassium channel activity","termid":"GO:1901979"},{"relation_name":"is_a","term_name":"negative regulation of voltage-gated potassium channel activity","termid":"GO:1903817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inward rectifier potassium channel activity","synonyms":[{"name":"down regulation of Kir channel activity","type":"exact"},{"name":"down regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"down-regulation of Kir channel activity","type":"exact"},{"name":"down-regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"downregulation of Kir channel activity","type":"exact"},{"name":"downregulation of inward rectifier potassium channel activity","type":"exact"},{"name":"inhibition of Kir channel activity","type":"narrow"},{"name":"inhibition of inward rectifier potassium channel activity","type":"narrow"},{"name":"negative regulation of Kir channel activity","type":"exact"}],"termid":"GO:1903609"}


id: MONDO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive clenching of the jaw and grinding of the teeth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bruxism","secondary_identifiers":["MESH:D002012","DOID:2846","UMLS:C0006325","MEDGEN:676","icd11.foundation:1046319083","ICD9:327.53","HP:0003763"],"synonyms":[{"name":"bruxism","type":"exact"},{"name":"bruxism (disease)","type":"exact"},{"name":"bruxism - teeth grinding","type":"exact"},{"name":"grinding teeth","type":"exact"},{"name":"sleep related bruxism","type":"exact"},{"name":"teeth grinding","type":"exact"}],"termid":"MONDO:0002443","xrefs":{"Monarch":{"xref_id":"0002443"}}}


id: _global:translation_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is translation of Y if Y is translated by ribosome to create X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation_of","termid":"_global:translation_of"}


id: MONDO:0019918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"},{"relation_name":"is_a","term_name":"chromosome 21 disorder","termid":"MONDO:0700124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 21","secondary_identifiers":["icd11.foundation:553200266","GARD:19337","MEDGEN:1673526","UMLS:C5190523","Orphanet:96187"],"synonyms":[{"name":"UPD(21)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 21","type":"exact"}],"termid":"MONDO:0019918","xrefs":{"Monarch":{"xref_id":"0019918"}}}


id: PBO:0055713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM and cysteine rich domains 1","termid":"PBO:0055713"}


id: GO:1905110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pulmonary blood vessel remodeling.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:22161164","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood vessel remodeling","termid":"GO:0060313"},{"relation_name":"is_a","term_name":"regulation of pulmonary blood vessel remodeling","termid":"GO:1905109"},{"relation_name":"negatively_regulates","term_name":"pulmonary blood vessel remodeling","termid":"GO:0101010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pulmonary blood vessel remodeling","synonyms":[{"name":"down regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"down-regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"downregulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"inhibition of pulmonary blood vessel remodeling","type":"narrow"},{"name":"negative regulation of pulmonary blood vessel remodelling","type":"exact"}],"termid":"GO:1905110"}


id: MONDO:0016437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late-onset focal dermal elastosis is a rare, acquired, dermis elastic tissue disorder characterized by a pseudoxanthoma elasticum-like papular eruption consisting of multiple, slowly progressive, asymptomatic, 2-5 mm, white to yellowish, non-follicular papules (that tend to form cobblestone plaques) predominantly distributed over the neck, axillae and flexural areas, with no systemic involvement. Skin biopsy reveals a focal increase of normal-appearing elastic tissue in the reticular dermis with no calcium deposits.","definition_xrefs":["Orphanet:228227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"late-onset focal dermal elastosis","secondary_identifiers":["MEDGEN:1658281","GARD:20578","UMLS:C4751167"],"synonyms":[{"name":"PXE-like late-onset focal dermal elastosis","type":"exact"},{"name":"pseudoxanthoma-like late-onset focal dermal elastosis","type":"exact"}],"termid":"MONDO:0016437","xrefs":{"Monarch":{"xref_id":"0016437"}}}


id: GO:0044615
data:
  {"annotated_genes":["SJAG_03593","SJAG_04645","SJAG_05243","SJAG_01584","SJAG_03300","SJAG_02274"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88205,90918,94172,114022,114680,115550],"is_not":false,"summary":null,"term":"GO:0044615"}]},"cv_name":"cellular_component","definition":"A filamentous, cage-like assembly on the nuclear face of the nuclear pore complex (NPC). In S. cerevisiae, Mlp1p and Mlp2p are two major components of the NPC nuclear basket. In vertebrates, Tpr is a major component.","definition_xrefs":["GOC:dgf","PMID:19524430","PMID:20947011","PMID:18046406","PMID:22419078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01584":null,"SJAG_02274":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_04645":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005643"}],"interesting_parent_ids":["GO:0005643","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear pore nuclear basket","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044615","terms_by_termid":{"GO:0044615":null}}


id: PBO:0050059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, Z (pseudogene)","termid":"PBO:0050059"}


id: GO:0050293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + testololactone = H+ + testolate.","definition_xrefs":["RHEA:13721","EC:3.1.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"steroid-lactonase activity","secondary_identifiers":["KEGG_REACTION:R03641","MetaCyc:STEROID-LACTONASE-RXN"],"synonyms":[{"name":"testololactone lactonohydrolase activity","type":"related"}],"termid":"GO:0050293"}


id: PBO:0001656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Spp42","termid":"PBO:0001656"}


id: MONDO:0021468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the adrenal medulla.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal medulla neoplasm","termid":"MONDO:0021237"},{"relation_name":"is_a","term_name":"benign neoplasm of adrenal gland","termid":"MONDO:0021511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of adrenal medulla","secondary_identifiers":["MEDGEN:151941","icd11.foundation:1573786673","NCIT:C4895","SCTID:91968002","UMLS:C0686512"],"synonyms":[{"name":"adrenal medulla benign neoplasm","type":"exact"},{"name":"benign adrenal medulla neoplasm","type":"exact"},{"name":"benign adrenal medulla tumor","type":"exact"},{"name":"benign adrenal medulla tumour","type":"exact"},{"name":"benign neoplasm of the adrenal medulla","type":"exact"},{"name":"benign tumor of adrenal medulla","type":"exact"},{"name":"benign tumor of the adrenal medulla","type":"exact"},{"name":"benign tumour of adrenal medulla","type":"exact"},{"name":"benign tumour of the adrenal medulla","type":"exact"}],"termid":"MONDO:0021468","xrefs":{"Monarch":{"xref_id":"0021468"}}}


id: FYPO:0001972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a septated cell. Nuclear division, contractile ring formation and constriction, and septum assembly are apparently normal, but the septum does not degrade. Additional rounds of nuclear division and cytokinesis may take place, resulting in the formation of a multiseptate cell.","definition_xrefs":["PMID:12654901","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in septated cell","synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in septated cell during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in septated cell","type":"exact"},{"name":"abnormal septum digestion after cytokinesis resulting in septated cell","type":"exact"},{"name":"boomerang shaped","type":"related"}],"termid":"FYPO:0001972"}


id: PBO:0086150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear migration; component of the mitochondria-ER-cortex-anchor (MECA); required for the association of mitochondria with the cell cortex and for accurate distribution of mitochondrial network; interacts with Mdm36p to link the ER and mitochondria at the cortex; localizes to the mother cell cortex and the bud tip; may mediate interactions of dynein and cytoplasmic microtubules with the cell cortex","termid":"PBO:0086150"}


id: GO:0016728
data:
  {"annotated_genes":["SJAG_04665","SJAG_00885","SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91642,106424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[71215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"},{"annotations":[71218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a disulfide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.17.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, disulphide as acceptor","type":"exact"}],"termid":"GO:0016728","terms_by_termid":{"GO:0004748":null,"GO:0008998":null,"GO:0051063":null}}


id: PBO:0040584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BABAM2 antisense RNA 1","termid":"PBO:0040584"}


id: GO:0031375
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity.","definition_xrefs":["GOC:mah","ISBN:0716720094","PMID:12957385","ISBN:0471331309"],"gene_count":0,"genotype_count":0,"name":"obsolete type II fatty acid synthase complex (obsolete GO:0031375)","synonyms":[{"name":"type II FAS","type":"exact"},{"name":"type II FAS complex","type":"exact"},{"name":"type II fatty acid synthase","type":"exact"},{"name":"type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031375"}


id: FYPO:0001737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pantothenate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal pantothenate import","synonyms":[{"name":"abnormal pantothenate import across plasma membrane","type":"exact"},{"name":"abnormal pantothenate import during mitotic cell cycle","type":"related"},{"name":"abnormal pantothenate import during vegetative growth","type":"exact"},{"name":"abnormal pantothenate import into cell","type":"exact"},{"name":"abnormal pantothenate uptake","type":"exact"},{"name":"abnormal pantothenic acid import","type":"related"}],"termid":"FYPO:0001737"}


id: GO:0031918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases synaptic metaplasticity. Metaplasticity is a higher-order form of plasticity and is manifest as a change in the ability to induce subsequent synaptic plasticity that is the ability of synapses to change as circumstances require.","definition_xrefs":["PMID:8658594","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic plasticity","termid":"GO:0031915"},{"relation_name":"is_a","term_name":"regulation of synaptic metaplasticity","termid":"GO:0031916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic metaplasticity","synonyms":[{"name":"activation of synaptic metaplasticity","type":"narrow"},{"name":"stimulation of synaptic metaplasticity","type":"narrow"},{"name":"up regulation of synaptic metaplasticity","type":"exact"},{"name":"up-regulation of synaptic metaplasticity","type":"exact"},{"name":"upregulation of synaptic metaplasticity","type":"exact"}],"termid":"GO:0031918"}


id: PBO:0035955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_Zeocin","termid":"PBO:0035955"}


id: GO:0072588
data:
  {"annotated_genes":["SJAG_01234","SJAG_00083","SJAG_00566","SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89214,100347,105447,94545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031429"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains an RNA of the box H/ACA type and the four core proteins dyskerin, NOP10, NHP2, and GAR1 (human protein nomenclature). RNA pseudouridylation (isomerization of uridine to pseudouridine) is the major, and most likely the ancestral, function of H/ACA RNPs. Pseudouridylation targets include both large and small ribosomal RNAs (rRNAs), and small nuclear RNA (U2 snRNA). In addition to these catalytic H/ACA RNPs, a less abundant but more diverse class of structural H/ACA RNPs exists, which does not have pseudouridylation activity. These include the vertebrate telomerase RNP complex.","definition_xrefs":["PMID:25590339","GOC:jbu","GOC:BHF","GOC:krc","GOC:mah","GOC:vw","PMID:17284456","PMID:20227365","GOC:BHF_telomerase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA-containing ribonucleoprotein complex","termid":"GO:0005732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"box H/ACA RNP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA snoRNP pseudouridylase complex","type":"related"},{"name":"sRNP complex","type":"narrow"}],"termid":"GO:0072588","terms_by_termid":{"GO:0031429":null}}


id: PBO:0086274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with an N-terminal kelch-like domain; putative negative regulator of early meiotic gene expression; required, with Mds3p, for growth under alkaline conditions; PMD1 has a paralog, MDS3, that arose from the whole genome duplication","termid":"PBO:0086274"}


id: GO:0034520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-naphthaldehyde + NAD+ + H2O = 2-naphthoate + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r0772"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-naphthaldehyde dehydrogenase activity (obsolete GO:0034520)","termid":"GO:0034520"}


id: PBO:0034285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dendrite_synapsed_in","termid":"PBO:0034285"}


id: PBO:0063705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 4","termid":"PBO:0063705"}


id: GO:0034821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citronellol + NAD+ = citronellal + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete citronellol dehydrogenase activity (obsolete GO:0034821)","termid":"GO:0034821"}


id: GO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response to an exogenous environmental antigen or an endogenous antigen initiated by the adaptive immune system.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypersensitivity","secondary_identifiers":["Wikipedia:Hypersensitivity"],"synonyms":[{"name":"hypersensitivity response","type":"related"}],"termid":"GO:0002524"}


id: FYPO:0003008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription from RNA polymerase II promoter occurs to a lower extent than normal during a cellular response to zinc. Specific genes are more highly transcribed in the presence of zinc in the mutant than in wild type.","definition_xrefs":["PMID:22496451","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased repression of transcription during cellular response to zinc","synonyms":[{"name":"decreased negative regulation of transcription from RNA polymerase II promoter during cellular response to zinc","type":"exact"},{"name":"decreased repression of transcription during cellular response to zinc during mitotic cell cycle","type":"related"},{"name":"decreased repression of transcription during cellular response to zinc during vegetative growth","type":"exact"},{"name":"decreased transcriptional repression during cellular response to zinc","type":"exact"},{"name":"reduced repression of transcription during cellular response to zinc","type":"exact"}],"termid":"FYPO:0003008"}


id: MONDO:0015437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 21 syndrome is an autosomal anomaly characterized by variable clinical features, most commonly including growth retardation, developmental delay, intellectual disability, epilepsy, microcephaly, short stature, dysmorphic features, hypogammaglobulinemia, thrombocytopenia and unspecific skeletal anomalies (hemivertebrae, clinodactyly, syndactyly). In rare cases, it has been described in phenotypically normal individuals.","definition_xrefs":["Orphanet:1445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"},{"relation_name":"is_a","term_name":"chromosome 21 disorder","termid":"MONDO:0700124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 21","secondary_identifiers":["UMLS:C2931422","MEDGEN:419409","SCTID:31325007","NORD:947","GARD:6083","MESH:C537109"],"synonyms":[{"name":"Chromosome 21 Ring","type":"exact"},{"name":"R21","type":"related"},{"name":"Ring 21","type":"related"},{"name":"Ring chromosome 21 syndrome","type":"related"},{"name":"Ring chromosome type 21","type":"exact"},{"name":"chromosome 21 en anneau","type":"exact"},{"name":"chromosome 21 ring","type":"related"}],"termid":"MONDO:0015437","xrefs":{"Monarch":{"xref_id":"0015437"}}}


id: PBO:0045373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPH6 divergent transcript","termid":"PBO:0045373"}


id: PBO:0089157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traub family protein involved in ribosome biogenesis","termid":"PBO:0089157"}


id: GO:0090202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation and maintenance of DNA loops that juxtapose sequentially separated regions of RNA polymerase II-transcribed genes.","definition_xrefs":["GOC:tb","PMID:19923429","GOC:rb","PMID:19933150","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete gene looping (obsolete GO:0090202)","termid":"GO:0090202"}


id: MONDO:0015541
data:
  {"annotated_genes":["SJAG_02572","SJAG_03536","SJAG_02453","SJAG_01697"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[84902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[85849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[85207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"}]},"cv_name":"mondo","definition":"An instance of hemophagocytic lymphohistiocytosis that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hemophagocytic syndrome","termid":"MONDO:0015540"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01697":null,"SJAG_02453":null,"SJAG_02572":null,"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hereditary hemophagocytic lymphohistiocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10070904","UMLS:C0272199","GARD:6589","MEDGEN:78797","Orphanet:540","SCTID:398250003","ICD9:238.79","OMIMPS:267700"],"synonyms":[{"name":"familial hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"genetic hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"genetic hemophagocytic syndrome","type":"exact"},{"name":"primary hemophagocytic lymphohistiocytosis","type":"exact"}],"termid":"MONDO:0015541","terms_by_termid":{"MONDO:0011336":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0013135":null},"xrefs":{"Monarch":{"xref_id":"0015541"}}}


id: GO:0044273
data:
  {"annotated_genes":["SJAG_02247","SJAG_04858","SJAG_01612","SJAG_00903","SJAG_03316"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[101443,98397,107869,97569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_01612":null,"SJAG_02247":null,"SJAG_03316":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfur compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sulfur catabolic process","type":"narrow"},{"name":"sulfur catabolism","type":"narrow"},{"name":"sulfur compound breakdown","type":"exact"},{"name":"sulfur compound catabolism","type":"exact"},{"name":"sulfur compound degradation","type":"exact"}],"termid":"GO:0044273","terms_by_termid":{"GO:0006751":null,"GO:0015938":null}}


id: PBO:0054729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2138","termid":"PBO:0054729"}


id: GO:0016611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex containing an iron-iron cluster found in species such as the photosynthetic bacterium Rhodobacter capsulatus. It is composed of two main subunits, dinitrogenase and nitrogenase reductase. Dinitrogenase, the iron-iron containing subunit, has an alpha1-beta2 or alpha2-beta2 structure, and the nitrogenase reductase subunit is a homodimer. Functions in the catalysis of the formation of oxidized ferredoxin and ammonia from reduced ferredoxin and nitrogen.","definition_xrefs":["GOC:jl","PMID:11848850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogenase complex","termid":"GO:0016610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"iron-iron nitrogenase complex","termid":"GO:0016611"}


id: PBO:0053209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 8","termid":"PBO:0053209"}


id: GO:0010012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-alpha-campestanaol + O2 = 6-deoxocathasterone + H2O.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete steroid 22-alpha hydroxylase activity (obsolete GO:0010012)","termid":"GO:0010012"}


id: FYPO:0003487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to ionizing radiation. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to ionizing radiation (obsolete FYPO:0003487)","synonyms":[{"name":"cut during cellular response to IR","type":"exact"},{"name":"cut during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003487"}


id: PBO:0062441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 105 pseudogene","termid":"PBO:0062441"}


id: MONDO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The use of alcoholic beverages to excess, either on individual occasions (\\\"binge drinking\\\") or as a regular practice.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"},{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol abuse","secondary_identifiers":["SCTID:15167005","UMLS:C0085762","ICD9:305.00","DOID:1574","MEDGEN:39339","MESH:D000437","ICD9:305.0"],"synonyms":[{"name":"abuse, alcohol","type":"related"},{"name":"addiction, alcohol","type":"related"},{"name":"alcohol abuse","type":"exact"},{"name":"alcohol addiction","type":"related"},{"name":"alcohol dependence","type":"related"},{"name":"alcohol use disorder","type":"related"},{"name":"alcoholic intoxication, chronic","type":"related"},{"name":"alcoholism","type":"related"},{"name":"chronic alcoholic intoxication","type":"related"},{"name":"dependence, alcohol","type":"related"},{"name":"ethanol abuse","type":"exact"},{"name":"intoxication, chronic alcoholic","type":"related"}],"termid":"MONDO:0002046","xrefs":{"Monarch":{"xref_id":"0002046"}}}


id: GO:0050028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminohexano-6-lactam + H2O = L-lysine.","definition_xrefs":["EC:3.5.2.11","RHEA:21388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"L-lysine-lactamase activity","secondary_identifiers":["KEGG_REACTION:R00463","MetaCyc:L-LYSINE-LACTAMASE-RXN"],"synonyms":[{"name":"L-alpha-aminocaprolactam hydrolase activity","type":"related"},{"name":"L-lysinamidase activity","type":"related"},{"name":"L-lysine-1,6-lactam lactamhydrolase activity","type":"related"}],"termid":"GO:0050028"}


id: GO:0044579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathway resulting in the formation of butyryl-CoA, starting from acetyl-CoA.","definition_xrefs":["GOC:tt","PMID:19539744","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"butyryl-CoA biosynthetic process","termid":"GO:0044578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0006629","GO:0055086"],"is_obsolete":false,"name":"butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"}],"termid":"GO:0044579"}


id: PBO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 3","termid":"PBO:0047687"}


id: GO:0015429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal fatty acyl transporter (obsolete GO:0015429)","synonyms":[{"name":"peroxisomal fatty acyl transporter","type":"exact"}],"termid":"GO:0015429"}


id: FYPO:0002904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is inviable and shaped in the form of a pear in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pear-shaped cell","termid":"FYPO:0000020"},{"relation_name":"is_a","term_name":"pear-shaped vegetative cell","termid":"FYPO:0001120"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable pear-shaped vegetative cell","synonyms":[{"name":"inviable ice cream cone-shaped cell during vegetative growth","type":"exact"},{"name":"inviable pear-shaped cell during vegetative growth","type":"exact"},{"name":"inviable pear-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; pear-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0002904"}


id: GO:1904337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ductus arteriosus closure.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16303610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ductus arteriosus closure","termid":"GO:1904335"},{"relation_name":"is_a","term_name":"positive regulation of artery morphogenesis","termid":"GO:1905653"},{"relation_name":"positively_regulates","term_name":"ductus arteriosus closure","termid":"GO:0097070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ductus arteriosus closure","synonyms":[{"name":"activation of ductus arteriosus closure","type":"narrow"},{"name":"up regulation of ductus arteriosus closure","type":"exact"},{"name":"up-regulation of ductus arteriosus closure","type":"exact"},{"name":"upregulation of ductus arteriosus closure","type":"exact"}],"termid":"GO:1904337"}


id: PBO:0050175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 31","termid":"PBO:0050175"}


id: PBO:0071258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 3","termid":"PBO:0071258"}


id: PBO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G1_to_G0_transition","termid":"PBO:0031775"}


id: MONDO:0008749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudohypoparathyroidism type 2 (PHP2) is a type of pseudohypoparathyroidism (PHP) characterized by resistance to parathyroid hormone (PTH), which manifests with hypocalcemia, hyperphosphatemia and elevated PTH levels, absence of Albright's hereditary osteodystrophy (AHO), and normal expression of the Gs protein with a normal urinary cAMP response.","definition_xrefs":["Orphanet:94090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoparathyroidism","termid":"MONDO:0019992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoparathyroidism type 2","secondary_identifiers":["GARD:10682","SCTID:42183005","UMLS:C2932717","MEDGEN:444371","icd11.foundation:1650158822","ICD9:275.49","NANDO:1201078","OMIM:203330","MESH:C548077"],"synonyms":[{"name":"PHP II","type":"related"},{"name":"PHP2","type":"related"},{"name":"Php 2","type":"related"},{"name":"pseudohypoparathyroidism, type II","type":"related"}],"termid":"MONDO:0008749","xrefs":{"Monarch":{"xref_id":"0008749"}}}


id: PBO:0055920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A8, pseudogene","termid":"PBO:0055920"}


id: PBO:0085326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol phosphate phosphatase; role in early and medial Golgi PtdIns4P hydrolysis; regulated by Vps74p interaction; ER localized transmembrane protein which cycles through the Golgi; role in protein trafficking, processing, secretion, and cell wall maintenance; regulates sphingolipid biosynthesis by modulating PtdIns(4)P metabolism; PtdIns4P PPase activity is crucial for autophagosome-vacuole fusion during autophagy; human homolog SACM1L complements autophagy defects of the null","termid":"PBO:0085326"}


id: PBO:0003893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase complex subunit (predicted)","termid":"PBO:0003893"}


id: MONDO:0015998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated ectopia lentis (IEL) is a rare, clinically variable, eye disorder characterized by dislocation of the lens, often causing significant reduction in visual acuity.","definition_xrefs":["Orphanet:1885"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marfan and Marfan-related disorder","termid":"MONDO:0017310"},{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated ectopia lentis","secondary_identifiers":["DOID:0111148","MEDGEN:342716","SCTID:74969002","NCIT:C34566","GARD:12251","MedDRA:10014145","PMID:20141359","MESH:C536184","UMLS:C1851286"],"synonyms":[{"name":"IEL","type":"exact"},{"name":"congenital ectopic lens","type":"related"},{"name":"ectopia lentis syndrome","type":"exact"},{"name":"familial ectopia lentis","type":"exact"},{"name":"isolated lens position anomaly","type":"exact"},{"name":"nonsyndromic lens position anomaly","type":"exact"}],"termid":"MONDO:0015998","xrefs":{"Monarch":{"xref_id":"0015998"}}}


id: GO:0003031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a carbon dioxide stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of carbon dioxide","termid":"GO:0003031"}


id: MONDO:0019408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Astley-Kendall dysplasia is a lethal skeletal dysplasia characterized by short limbed dwarfism, osteogenesis imperfecta, and punctate calcification within cartilage. It has been described in less than ten cases.","definition_xrefs":["Orphanet:85175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Astley-Kendall dysplasia","secondary_identifiers":["UMLS:C1300228","icd11.foundation:1367227076","GARD:19050","MEDGEN:224886","NANDO:2201362","MESH:C535392","SCTID:389263004"],"synonyms":[{"name":"Astley-Kendall syndrome","type":"related"},{"name":"short limbed dwarfism with extensive stippling","type":"related"}],"termid":"MONDO:0019408","xrefs":{"Monarch":{"xref_id":"0019408"}}}


id: PR:Q09861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29E6.07 gene.","definition_xrefs":["UniProtKB:Q09861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29E6.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.07","synonyms":[{"name":"Spom972h-SPAC29E6.07","type":"exact"}],"termid":"PR:Q09861"}


id: PBO:0082885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with and phosphorylated by Pho85p cyclin-dependent kinase (Cdk), induced by Gcn4p at level of transcription, specifically required for Gcn4p degradation, may be sensor of cellular protein biosynthetic capacity","termid":"PBO:0082885"}


id: GO:0045933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle contraction","synonyms":[{"name":"activation of muscle contraction","type":"narrow"},{"name":"stimulation of muscle contraction","type":"narrow"},{"name":"up regulation of muscle contraction","type":"exact"},{"name":"up-regulation of muscle contraction","type":"exact"},{"name":"upregulation of muscle contraction","type":"exact"}],"termid":"GO:0045933"}


id: PBO:0090452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex ATP-dependent chromatin remodeller Mit1","termid":"PBO:0090452"}


id: GO:0034030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate biosynthetic process","termid":"GO:0033866"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside bisphosphate biosynthetic process","synonyms":[{"name":"ribonucleoside bisphosphate anabolism","type":"exact"},{"name":"ribonucleoside bisphosphate biosynthesis","type":"exact"},{"name":"ribonucleoside bisphosphate formation","type":"exact"},{"name":"ribonucleoside bisphosphate synthesis","type":"exact"}],"termid":"GO:0034030"}


id: PBO:0086862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SCF-ubiquitin ligase F-box protein; based on both genetic and physical interactions and sequence similarity; identified in association with Cdc53p, Skp1p and Ubi4 in large and small-scale studies","termid":"PBO:0086862"}


id: PBO:0047189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 207 member B, pseudogene","termid":"PBO:0047189"}


id: MONDO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectodermal dysplasia-syndactyly syndrome (obsolete MONDO:0000165)","termid":"MONDO:0000165","xrefs":{"Monarch":{"xref_id":"0000165"}}}


id: FYPO:0002411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable curved elongated vegetative cell","synonyms":[{"name":"curved elongated inviable cell","type":"exact"},{"name":"inviable curved elongated cell","type":"exact"},{"name":"inviable curved elongated cell during vegetative growth","type":"exact"},{"name":"inviable curved elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002411"}


id: PBO:0067132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 180, pseudogene","termid":"PBO:0067132"}


id: MONDO:0010798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proximal tubulopathy-diabetes mellitus-cerebellar ataxia syndrome is characterized by onset of proximal tubulopathy in the first year of life, followed by progressive development during childhood of skin anomalies (erythrocyanosis and abnormal pigmentation), blindness, osteoporosis, cerebellar ataxia, mitochondrial myopathy, deafness and diabetes mellitus.","definition_xrefs":["Orphanet:3390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proximal tubulopathy-diabetes mellitus-cerebellar ataxia syndrome","secondary_identifiers":["MESH:C564014","OMIM:560000","MEDGEN:463309","UMLS:C3151959"],"synonyms":[{"name":"proximal tubulopathy, diabetes mellitus and cerebellar ataxia","type":"related"},{"name":"renal tubulopathy, diabetes mellitus, and cerebellar ataxia","type":"related"},{"name":"renal tubulopathy, diabetes mellitus, and cerebellar ataxia due to duplication of mitochondrial DNA","type":"related"}],"termid":"MONDO:0010798","xrefs":{"Monarch":{"xref_id":"0010798"}}}


id: PR:O74763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03659","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C17D11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.08","secondary_identifiers":["UniProtKB:O74763"],"synonyms":[{"name":"Spom972h-DCAF7","type":"exact"}],"termid":"PR:O74763"}


id: PBO:0064492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit E","termid":"PBO:0064492"}


id: GO:0044655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the pH of the phagosome, measured by the concentration of the hydrogen ion, as part of the process of phagosome maturation.","definition_xrefs":["GOC:rjd","PMID:22008230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH elevation","termid":"GO:0051454"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phagosome reneutralization","synonyms":[{"name":"phagosomal reneutralization","type":"exact"},{"name":"phagosome pH elevation","type":"exact"}],"termid":"GO:0044655"}


id: GO:0045137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary sexual characteristics over time, from their formation to the mature structures. The primary sexual characteristics are the testes in males and the ovaries in females and they develop in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of primary sexual characteristics","termid":"GO:0045137"}


id: PBO:0079847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-45 myosin chaperone B","termid":"PBO:0079847"}


id: PR:P78937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua1 gene.","definition_xrefs":["UniProtKB:P78937","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.08c","synonyms":[{"name":"ATP-sulfurylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua1","type":"exact"},{"name":"sulfate adenylate transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78937"}


id: PBO:0067675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 860, pseudogene","termid":"PBO:0067675"}


id: PBO:0058156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4451","termid":"PBO:0058156"}


id: GO:0021627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the olfactory nerve is generated and organized. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve morphogenesis","synonyms":[{"name":"CN I morphogenesis","type":"related"}],"termid":"GO:0021627"}


id: PBO:0070128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 42 pseudogene","termid":"PBO:0070128"}


id: GO:0031567
data:
  {"annotated_genes":["SJAG_03048","SJAG_01401","SJAG_01210","SJAG_03681","SJAG_02392","SJAG_04280","SJAG_03602","SJAG_04332","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101542,115036,100805,88153,108038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[95047,115140,93738,97628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint during mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044772","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"mitotic cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072471"],"synonyms":[{"name":"mitotic cell cycle cell size control checkpoint","type":"related"},{"name":"mitotic cell size control checkpoint","type":"related"},{"name":"signal transduction involved in cell size control checkpoint","type":"related"}],"termid":"GO:0031567","terms_by_termid":{"GO:0031568":null,"GO:0031569":null}}


id: PBO:0052719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 11","termid":"PBO:0052719"}


id: FYPO:0007930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of phloxine B and hydrogen peroxide. Cells stop growing (and may die) at concentrations of phloxine B and hydrogen peroxide that allow wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to phloxine B and hydrogen peroxide","termid":"FYPO:0007930"}


id: PBO:0040957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 28","termid":"PBO:0040957"}


id: GO:0072384
data:
  {"annotated_genes":["SJAG_05185","SJAG_00368","SJAG_02431","SJAG_04597","SJAG_03073","SJAG_02737","SJAG_02286","SJAG_03673","SJAG_01370","SJAG_01863","SJAG_00113","SJAG_01613","SJAG_02045","SJAG_00140","SJAG_02561","SJAG_04143","SJAG_01662","SJAG_04001","SJAG_00397"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91042,90200,90590,100614,110545,94401,99913,113077,110367,86969,96770,116076,102142,110192,102433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[105748,110369,100615],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[98428,96845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[86973,90592,94403,98429,96772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[93613],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"The directed movement of an organelle along a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"organelle transport along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule-based organelle localization","type":"exact"}],"termid":"GO:0072384","terms_by_termid":{"GO:0000743":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:1902854":null}}


id: PBO:0052157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ5 antisense RNA 1","termid":"PBO:0052157"}


id: MONDO:1010912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, domestic cat","secondary_identifiers":["OMIA:000679-9685"],"termid":"MONDO:1010912","xrefs":{"Monarch":{"xref_id":"1010912"}}}


id: PBO:0080299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 63 pseudogene","termid":"PBO:0080299"}


id: FYPO:0001095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at a replication origin by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished DNA replication origin binding","synonyms":[{"name":"DNA replication origin binding abolished","type":"exact"},{"name":"abolished origin binding","type":"exact"}],"termid":"FYPO:0001095"}


id: PR:P78812
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 6-phosphogluconate dehydrogenase, decarboxylating that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02372","PRO:DNx","PANTHER:PTHR11811:SF19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase, decarboxylating (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.16","secondary_identifiers":["UniProtKB:P78812"],"synonyms":[{"name":"Spom972h-PGD","type":"exact"}],"termid":"PR:P78812"}


id: MONDO:0018350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant tumor of penis (obsolete MONDO:0018350)","termid":"MONDO:0018350","xrefs":{"Monarch":{"xref_id":"0018350"}}}


id: PBO:0062548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily M member 1, pseudogene","termid":"PBO:0062548"}


id: GO:0031409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pigment, a general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pigment binding","termid":"GO:0031409"}


id: PBO:0031295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_sterol_distribution","termid":"PBO:0031295"}


id: GO:0061863
data:
  {"annotated_genes":["SJAG_02624","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117277,117792],"is_not":false,"summary":null,"term":"GO:0061863"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of tubulin dimers to the plus end of a microtubule. The reaction is reversible depending on the availability of dimers.","definition_xrefs":["PMID:27872152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02624":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"microtubule plus end polymerase","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061863","terms_by_termid":{"GO:0061863":null}}


id: PBO:0055456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2888","termid":"PBO:0055456"}


id: PBO:0087621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COP9 signalosome (CSN) complex; this complex cleaves the ubiquitin-like protein Nedd8 from SCF ubiquitin ligases; plays a role in the mating pheromone response","termid":"PBO:0087621"}


id: GO:0045157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of electrons within the noncyclic electron transport pathway of photosynthesis.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity","synonyms":[{"name":"cytochrome","type":"related"}],"termid":"GO:0045157"}


id: MOD:00365
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and a glycine residue by an isopeptide bond to form N-(L-isoglutamyl)-glycine.","definition_xrefs":["RESID:AA0360","PubMed:14531691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoglutamyl)-glycine","synonyms":[{"name":"(S)-2-amino-5-(carboxymethyl)amino-5-oxopentanoic acid","type":"exact"},{"name":"2-amino-N5-(carboxymethyl)-pentanediamic acid","type":"exact"},{"name":"CROSSLNK Isoglutamyl glycine isopeptide (Gly-Glu)","type":"exact"},{"name":"N-(L-isoglutamyl)-glycine","type":"exact"},{"name":"N-gamma-glutamylglycine","type":"exact"},{"name":"isoglutamyl glycine","type":"exact"}],"termid":"MOD:00365"}


id: GO:0034379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-covalent aggregation and arrangement of proteins and lipids in the liver to form a very-low-density lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle assembly","termid":"GO:0034377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"very-low-density lipoprotein particle assembly","synonyms":[{"name":"VLDL assembly","type":"exact"}],"termid":"GO:0034379"}


id: MONDO:0100123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bronchiolitis as a response to a toxic exposure.","direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis","termid":"MONDO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic bronchiolitis","termid":"MONDO:0100123","xrefs":{"Monarch":{"xref_id":"0100123"}}}


id: FYPO:0004723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is assembled in an incorrect orientation. Spindle orientation is later corrected so that the spindle is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misoriented mitotic spindle","termid":"FYPO:0007388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002399","FYPO:0005447","FYPO:0000120","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"transiently misoriented mitotic spindle","synonyms":[{"name":"transient abnormal mitotic spindle orientation","type":"exact"},{"name":"transient mitotic spindle misorientation","type":"exact"},{"name":"transiently misoriented mitotic spindle during vegetative growth","type":"exact"},{"name":"transiently misoriented spindle during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004723"}


id: PBO:0028928
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septum_orientation","termid":"PBO:0028928"}


id: GO:0018850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-chloro-2,5-dihydro-5-oxofuran-2-acetate = 3-chloro-cis,cis-muconate.","definition_xrefs":["EC:5.5.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"chloromuconate cycloisomerase activity","secondary_identifiers":["RHEA:11032"],"synonyms":[{"name":"2-chloro-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing)","type":"related"},{"name":"muconate cycloisomerase II activity","type":"related"}],"termid":"GO:0018850"}


id: SO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene that arose via gene duplication. Generally duplicated pseudogenes have the same structure as the original gene, including intron-exon structure and some regulatory sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplicated_pseudogene","synonyms":[{"name":"duplicated pseudogene","type":"related"}],"termid":"SO:0001758"}


id: GO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a tetratricopeptide repeat (TPR) domain of a protein, the consensus sequence of which is defined by a pattern of small and large hydrophobic amino acids and a structure composed of helices.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"TPR domain binding","synonyms":[{"name":"tetratricopeptide repeat domain binding","type":"exact"}],"termid":"GO:0030911"}


id: PBO:0077683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 13","termid":"PBO:0077683"}


id: internal:misnomer
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misnomer","termid":"internal:misnomer"}


id: MONDO:0859188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures and brain abnormalities","secondary_identifiers":["MEDGEN:1794189","OMIM:619517","UMLS:C5561979"],"termid":"MONDO:0859188","xrefs":{"Monarch":{"xref_id":"0859188"}}}


id: PBO:0063181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox 2 pseudogene 1","termid":"PBO:0063181"}


id: GO:0050495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-glycine ethanolamide-linked phosphatide following hydrolysis of a glycyl-peptide bond, as in the cleavage of arginine from the carboxy-terminal of Apg8 followed by its amidation with phosphatidylethanolamine.","definition_xrefs":["RESID:AA0346"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glycyl-phosphatidylethanolamine biosynthetic process from peptidyl-glycine (obsolete GO:0050495)","synonyms":[{"name":"peptidyl-glycyl-phosphatidylethanolamine anabolism from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycyl-phosphatidylethanolamine formation from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycyl-phosphatidylethanolamine synthesis from peptidyl-glycine","type":"exact"}],"termid":"GO:0050495"}


id: GO:0010361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which blue light modulates the frequency, rate or extent of anion channel activity.","definition_xrefs":["GOC:dph","PMID:17319842","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anion channel activity","termid":"GO:0010359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of anion channel activity by blue light","synonyms":[{"name":"regulation by blue light of anion channel activity","type":"exact"}],"termid":"GO:0010361"}


id: MONDO:0005051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating lobular adenocarcinoma of the breast. The malignant cells lack cohesion and are arranged individually or in a linear manner (Indian files), or as narrow trabeculae within the stroma. The malignant cells are usually smaller than those of ductal carcinoma, are less pleomorphic, and have fewer mitotic figures.","definition_xrefs":["NCIT:C7950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast lobular carcinoma","termid":"MONDO:0000552"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive lobular breast carcinoma","secondary_identifiers":["MEDGEN:75994","DOID:3457","UMLS:C0279565","EFO:0000553","ONCOTREE:ILC"],"synonyms":[{"name":"breast invasive lobular carcinoma","type":"related"},{"name":"classic invasive lobular carcinoma","type":"exact"},{"name":"infiltrating lobular adenocarcinoma","type":"exact"},{"name":"infiltrating lobular breast carcinoma","type":"exact"},{"name":"infiltrating lobular carcinoma of breast","type":"exact"},{"name":"infiltrating lobular carcinoma of the breast","type":"exact"},{"name":"invasive lobular adenocarcinoma","type":"exact"},{"name":"invasive lobular breast carcinoma","type":"exact"},{"name":"invasive lobular carcinoma","type":"exact"},{"name":"invasive lobular carcinoma of breast","type":"exact"},{"name":"invasive lobular carcinoma of the breast","type":"exact"},{"name":"invasive lobular carcinoma, classic type","type":"exact"},{"name":"lobular carcinoma","type":"broad"},{"name":"lobular carcinoma (morphologic abnormality)","type":"broad"},{"name":"lobular carcinoma NOS (morphologic abnormality)","type":"broad"},{"name":"lobular carcinoma of the breast","type":"broad"}],"termid":"MONDO:0005051","xrefs":{"Monarch":{"xref_id":"0005051"}}}


id: GO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of cilia of inner ear epithelial cells, resulting the aggregation of otolith seed particles.","definition_xrefs":["GOC:dph","GOC:krc","PMID:19043402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cilium movement involved in extracellular fluid movement","termid":"GO:0003351"},{"relation_name":"part_of","term_name":"otolith formation","termid":"GO:0032475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cilium movement involved in otolith formation","termid":"GO:0003355"}


id: PR:O74833
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA ligase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04379","PANTHER:PTHR10459:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.05c","secondary_identifiers":["UniProtKB:O74833"],"synonyms":[{"name":"DNA ligase IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LIG4","type":"exact"},{"name":"polydeoxyribonucleotide synthase [ATP] 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74833"}


id: MONDO:0044251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete australia antigen (obsolete MONDO:0044251)","secondary_identifiers":["OMIM:209800"],"synonyms":[{"name":"Australia antigen","type":"related"}],"termid":"MONDO:0044251","xrefs":{"Monarch":{"xref_id":"0044251"}}}


id: PBO:0050187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 4","termid":"PBO:0050187"}


id: PBO:0031006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_cell","termid":"PBO:0031006"}


id: PBO:0028596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_UDP-N-acetylglucosamine-dolichyl-phosphate_N-acetylglucosaminephosphotransferase_activity","termid":"PBO:0028596"}


id: PBO:0031189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_during_cellular_response_to_salt_stress","termid":"PBO:0031189"}


id: PBO:0040005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 14 effector protein like","termid":"PBO:0040005"}


id: PBO:0059767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 41","termid":"PBO:0059767"}


id: PBO:0090055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA complex subunit, Armadillo-type fold Tti1","termid":"PBO:0090055"}


id: PBO:0072930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 10","termid":"PBO:0072930"}


id: PBO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.13.70","termid":"PBO:0000470"}


id: FYPO:0003348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a gene product that executes glutathione synthetase activity in wild type is altered such that the gene product executes homoglutathione synthetase activity.","definition_xrefs":["PomBase:mah","PMID:23091597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered substrate specificity","termid":"FYPO:0003347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"altered substrate specificity, glutathione synthetase to homoglutathione synthetase activity","synonyms":[{"name":"abnormal catalytic activity, altered substrate specificity, glutathione synthetase to homoglutathione synthetase activity","type":"exact"}],"termid":"FYPO:0003348"}


id: PBO:0059447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 1","termid":"PBO:0059447"}


id: MONDO:0859230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kury-Isidor syndrome","secondary_identifiers":["MEDGEN:1807460","UMLS:C5676925","OMIM:619762"],"termid":"MONDO:0859230","xrefs":{"Monarch":{"xref_id":"0859230"}}}


id: GO:0080108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.","definition_xrefs":["PMID:14871316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"S-alkylthiohydroximate lyase activity","synonyms":[{"name":"S-alkylthiohydroximate C-S lyase activity","type":"narrow"}],"termid":"GO:0080108"}


id: PBO:0082576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin transglycosylase; functions in the transfer of chitin to beta(1-6) and beta(1-3) glucans in the cell wall; similar and functionally redundant to Utr2; localizes to sites of polarized growth; expression induced by cell wall stress","termid":"PBO:0082576"}


id: GO:0043126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of the enzyme 1-phosphatidylinositol 4-kinase.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 1-phosphatidylinositol 4-kinase activity (obsolete GO:0043126)","synonyms":[{"name":"regulation of PI4K activity","type":"exact"}],"termid":"GO:0043126"}


id: GO:0120006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamatergic neuron differentiation.","definition_xrefs":["PMID:24030726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"glutamatergic neuron differentiation","termid":"GO:1905962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glutamatergic neuron differentiation","termid":"GO:0120006"}


id: PBO:0070370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 8","termid":"PBO:0070370"}


id: PBO:0011972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Rad22 (previously Rad52)","termid":"PBO:0011972"}


id: PBO:0040879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 4","termid":"PBO:0040879"}


id: PBO:0080065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 2","termid":"PBO:0080065"}


id: GO:0000070
data:
  {"annotated_genes":["SJAG_02286","SJAG_05032","SJAG_00244","SJAG_02246","SJAG_05290","SJAG_00871","SJAG_04884","SJAG_03126","SJAG_04003","SJAG_00082","SJAG_00146","SJAG_04280","SJAG_00930","SJAG_00678","SJAG_03220","SJAG_04699","SJAG_01613","SJAG_02731","SJAG_02169","SJAG_04841","SJAG_03327","SJAG_03217","SJAG_03835","SJAG_01330","SJAG_03073","SJAG_00460","SJAG_03543","SJAG_04901","SJAG_01928","SJAG_02336","SJAG_00418","SJAG_04126","SJAG_01211","SJAG_04259","SJAG_04076","SJAG_04661","SJAG_01805","SJAG_05193","SJAG_03989","SJAG_02814","SJAG_02807","SJAG_03116","SJAG_03832","SJAG_04040","SJAG_03619","SJAG_03161","SJAG_02451","SJAG_01215","SJAG_00796","SJAG_01082","SJAG_03683","SJAG_04581","SJAG_03682","SJAG_04255","SJAG_05319","SJAG_01228","SJAG_05220","SJAG_07018","SJAG_04597","SJAG_01067","SJAG_04745","SJAG_00918","SJAG_01775","SJAG_04177","SJAG_00646","SJAG_04140","SJAG_01224","SJAG_01371","SJAG_04999","SJAG_01278","SJAG_01679","SJAG_01873","SJAG_01370","SJAG_05329","SJAG_03062","SJAG_01837","SJAG_00350","SJAG_04623","SJAG_03048","SJAG_02609","SJAG_02664","SJAG_05266","SJAG_00335","SJAG_03353","SJAG_02624","SJAG_02761","SJAG_03681","SJAG_00768","SJAG_00697","SJAG_03437","SJAG_01297","SJAG_02513","SJAG_02346","SJAG_02542","SJAG_04412","SJAG_03540","SJAG_02045","SJAG_00773","SJAG_00883","SJAG_05321","SJAG_01546","SJAG_00794","SJAG_00207","SJAG_01956","SJAG_03942","SJAG_03567","SJAG_00684","SJAG_01601","SJAG_02186","SJAG_00302"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87218,88896,89246,89553,89987,93501,93896,95438,95967,98462,100518,102227,103074,104638,104709,105524,107412,108178,108294,108363,109462,111035,111322,112684,113268,113698,115059,115804,116002,117817],"is_not":false,"summary":null,"term":"GO:0000070"},{"annotations":[104636,117784,101619,86967,94502,109503,117268,109059,112910,87215,89245,99566,110826,97098,100516,90589,97819,94755,115661,90199,109460],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[103069,106393,107405,98782,111101,89932,113401,115034,112911],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[74950,93967,94504],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[107406],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[108177,98419,102226,95965],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[93969,109060],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[87217,110828],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990893"},{"annotations":[103800,115046,116838,111190,90991,105354,112516,96949,115662,102352],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007076"},{"annotations":[99570,107409,103071],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007079"},{"annotations":[93397,97822,103072,107410,98423],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[113229,112914,117816,108034,88569,112362,111752,101199,102722,90187,116049,88349,97824,107411,93398,99705,88953,109044,113633,97823,101621,98322,106662,115803,111753,101200,93027,101198,103073,111751],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[89554,99982,101022,94361,116706,90954],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051306"},{"annotations":[99571,96483,100175,95968,117789,114181,108763,109727,96066],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090307"},{"annotations":[98626,115805,100982,109061,112915,113634,114689,89934,105479],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[100621,106586,98424,102723,117790,107413,117275,103075],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000022"},{"annotations":[99572,93970,102724],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061805"},{"annotations":[93971,96484,103076,99047,99573,100622,107414,97825],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[98425,100623],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140641"},{"annotations":[93972,96485,98426,100624,108005],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[101545],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[114690,105480],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045841"},{"annotations":[102455],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000816"},{"annotations":[93399],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[115143,104341,111102],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[115809],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[89205,110345,115812,93001,101565],"is_not":false,"rel_names":["regulates","part_of"],"summary":null,"term":"GO:0140429"},{"annotations":[93612,89206],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902846"},{"annotations":[93400],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"},{"annotations":[115814],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0033047"},{"annotations":[115816],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140273"}]},"cv_name":"biological_process","definition":"The cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets.","definition_xrefs":["GOC:ai","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid segregation","termid":"GO:0000819"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":110,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00146":null,"SJAG_00207":null,"SJAG_00244":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00350":null,"SJAG_00418":null,"SJAG_00460":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00684":null,"SJAG_00697":null,"SJAG_00768":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00796":null,"SJAG_00871":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01067":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01679":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_01928":null,"SJAG_01956":null,"SJAG_02045":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02246":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02513":null,"SJAG_02542":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02664":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03126":null,"SJAG_03161":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03567":null,"SJAG_03619":null,"SJAG_03681":null,"SJAG_03682":null,"SJAG_03683":null,"SJAG_03832":null,"SJAG_03835":null,"SJAG_03942":null,"SJAG_03989":null,"SJAG_04003":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04412":null,"SJAG_04581":null,"SJAG_04597":null,"SJAG_04623":null,"SJAG_04661":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_04901":null,"SJAG_04999":null,"SJAG_05032":null,"SJAG_05193":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05319":null,"SJAG_05321":null,"SJAG_05329":null,"SJAG_07018":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic sister chromatid segregation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016359"],"synonyms":[{"name":"mitotic chromosome segregation","type":"exact"},{"name":"mitotic sister-chromatid adhesion release","type":"narrow"}],"termid":"GO:0000070","terms_by_termid":{"GO:0000022":null,"GO:0000070":null,"GO:0000073":null,"GO:0007076":null,"GO:0007079":null,"GO:0007094":null,"GO:0033047":null,"GO:0045841":null,"GO:0051256":null,"GO:0051306":null,"GO:0051315":null,"GO:0061804":null,"GO:0061805":null,"GO:0090266":null,"GO:0090267":null,"GO:0090307":null,"GO:0099606":null,"GO:0099607":null,"GO:0140273":null,"GO:0140429":null,"GO:0140499":null,"GO:0140641":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902846":null,"GO:1990758":null,"GO:1990810":null,"GO:1990893":null,"GO:1990942":null,"GO:2000816":null}}


id: PBO:0077207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 6 superfamily member 2","termid":"PBO:0077207"}


id: PBO:0111903
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0111903"}


id: PBO:0031661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pseudohyphal_growth","termid":"PBO:0031661"}


id: PBO:0061701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 1","termid":"PBO:0061701"}


id: PBO:0044859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 4-desaturase, sphingolipid 2","termid":"PBO:0044859"}


id: MONDO:1012245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone degeneration, non-human animal","termid":"MONDO:1011981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone degeneration, domestic cat","secondary_identifiers":["OMIA:000880-9685"],"termid":"MONDO:1012245","xrefs":{"Monarch":{"xref_id":"1012245"}}}


id: PBO:0089252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA queuosine modification protein Qtr3","termid":"PBO:0089252"}


id: MONDO:0007834
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495","SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85719,85718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[86047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"}]},"cv_name":"mondo","definition":"A sporadic or inherited disorder characterized by the focal or diffuse proliferation of the cells of the islets of Langerhans in the pancreas. It results in hyperinsulinemia and hypoglycemia.","definition_xrefs":["NCIT:C4375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03266":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"islet cell adenomatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:274944000","MEDGEN:293643","UMLS:C1578917","OMIM:147630","MESH:C563258"],"synonyms":[{"name":"INSDM","type":"related"},{"name":"INSULINOMATOSIS and diabetes mellitus","type":"related"},{"name":"Insulinomatosis and diabetes mellitus","type":"related"},{"name":"islet cell adenomatosis","type":"exact"},{"name":"nesidioblastosis","type":"related"}],"termid":"MONDO:0007834","terms_by_termid":{"MONDO:0011236":null,"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0007834"}}}


id: PBO:0084075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein involved in beta-tubulin (Tub2p) folding; isolated as mutant with increased chromosome loss and sensitivity to benomyl; regulated by the GTPase-activating protein, Cin2p, the human retinitis pigmentosa 2 (RP2) homolog","termid":"PBO:0084075"}


id: MONDO:0013961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the SEMA3A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 16 with or without anosmia","secondary_identifiers":["ICD10CM:E23.0","GARD:15878","UMLS:C3554021","MEDGEN:766935","OMIM:614897","DOID:0090080"],"synonyms":[{"name":"HH16","type":"related"},{"name":"SEMA3A hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 16 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in SEMA3A","type":"exact"}],"termid":"MONDO:0013961","xrefs":{"Monarch":{"xref_id":"0013961"}}}


id: GO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by the detection of carbon dioxide levels in the brain stem. Increased levels activate the sympathetic vasoconstrictor mechanism increasing the force with which blood flows through the circulatory system.","definition_xrefs":["ISBN:0721643949","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by ischemic conditions","synonyms":[{"name":"CNS ischemic response","type":"related"},{"name":"ischemic control of blood pressure","type":"related"},{"name":"ischemic regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001980"}


id: PBO:0081246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 17","termid":"PBO:0081246"}


id: PBO:0085391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane metalloid/H+ antiporter; member of bile/arsenite/riboflavin transporter (BART) superfamily; transports arsenite and antimonite; required for resistance to arsenic compounds; transcription is activated by Arr1p in the presence of arsenite; protein displays 10 transmembrane segments with cytoplasmically oriented N- and C-terminal domains","termid":"PBO:0085391"}


id: GO:1903919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament severing.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:23325791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of actin filament severing","termid":"GO:1903918"},{"relation_name":"negatively_regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin filament severing","synonyms":[{"name":"down regulation of F-actin severing","type":"exact"},{"name":"down regulation of actin filament severing","type":"exact"},{"name":"down regulation of actin filament severing activity","type":"related"},{"name":"down regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"down-regulation of F-actin severing","type":"exact"},{"name":"down-regulation of actin filament severing","type":"exact"},{"name":"down-regulation of actin filament severing activity","type":"related"},{"name":"down-regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"downregulation of F-actin severing","type":"exact"},{"name":"downregulation of actin filament severing","type":"exact"},{"name":"downregulation of actin filament severing activity","type":"related"},{"name":"downregulation of barbed-end actin capping/severing activity","type":"related"},{"name":"inhibition of F-actin severing","type":"narrow"},{"name":"inhibition of actin filament severing","type":"narrow"},{"name":"inhibition of actin filament severing activity","type":"related"},{"name":"inhibition of barbed-end actin capping/severing activity","type":"related"},{"name":"negative regulation of F-actin severing","type":"exact"},{"name":"negative regulation of actin filament severing activity","type":"related"},{"name":"negative regulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903919"}


id: GO:0061801
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3B, beta3 and gamma2 polypeptide chains.","definition_xrefs":["GOC:dph","PMID:15979864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-5B complex","synonyms":[{"name":"laminin 3B32 complex","type":"exact"}],"termid":"GO:0061801"}


id: GO:1903423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22745285","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle recycling","synonyms":[{"name":"activation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"activation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"activation of synaptic vesicle recycling","type":"narrow"},{"name":"positive regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"positive regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"up regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"up regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"up regulation of synaptic vesicle recycling","type":"exact"},{"name":"up-regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"up-regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"up-regulation of synaptic vesicle recycling","type":"exact"},{"name":"upregulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"upregulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"upregulation of synaptic vesicle recycling","type":"exact"}],"termid":"GO:1903423"}


id: PBO:0026806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_DNA_double-strand_break_formation","termid":"PBO:0026806"}


id: GO:0023047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a chemical signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by chemical mediator (obsolete GO:0023047)","synonyms":[{"name":"signal initiation by chemical mediator","type":"exact"}],"termid":"GO:0023047"}


id: FYPO:0002701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to torin1. Cells stop growing (and may die) at a concentration of torin1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to torin1","synonyms":[{"name":"hypersensitive to torin1","type":"exact"},{"name":"sensitive to torin 1","type":"exact"},{"name":"sensitive to torin1 during mitotic cell cycle","type":"related"},{"name":"sensitive to torin1 during vegetative growth","type":"exact"}],"termid":"FYPO:0002701"}


id: PBO:0063331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 7","termid":"PBO:0063331"}


id: GO:0001627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine-rich G-protein receptor-like receptor activity (obsolete GO:0001627)","synonyms":[{"name":"LGR-like receptor","type":"exact"},{"name":"leucine-rich G protein receptor-like receptor activity","type":"exact"},{"name":"leucine-rich G-protein receptor-like receptor activity","type":"exact"}],"termid":"GO:0001627"}


id: PBO:0086771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; sporulation is abnormal in homozygous diploid; SWAT-GFP fusion protein localizes to the nucleus; YOR268C is not an essential gene","termid":"PBO:0086771"}


id: GO:0048866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a stem cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:isa_complete","CL:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"stem cell fate commitment","termid":"GO:0048865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell fate specification","termid":"GO:0048866"}


id: GO:0031893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasopressin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"vasopressin receptor binding","synonyms":[{"name":"vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031893"}


id: GO:0032325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor catabolic process","termid":"GO:0032325"}


id: PBO:0082768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sorting and Assembly Machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; binds precursors of beta-barrel proteins and facilitates their outer membrane insertion; contributes to SAM complex stability","termid":"PBO:0082768"}


id: GO:0006551
data:
  {"annotated_genes":["SJAG_02841","SJAG_03985","SJAG_04149","SJAG_03243","SJAG_06635","SJAG_03562","SJAG_00396","SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110238],"is_not":false,"summary":null,"term":"GO:0006551"},{"annotations":[102471,105343,100011,109226,89895,112387,109579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"},{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-leucine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-leucine metabolism","type":"exact"},{"name":"leucine metabolic process","type":"broad"}],"termid":"GO:0006551","terms_by_termid":{"GO:0006551":null,"GO:0009098":null}}


id: PBO:0047835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box Q1","termid":"PBO:0047835"}


id: PBO:0090507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, DDB1 and CUL4-associated factor Dca7","termid":"PBO:0090507"}


id: GO:0071267
data:
  {"annotated_genes":["SJAG_00419","SJAG_03881","SJAG_02689","SJAG_03614","SJAG_00309","SJAG_01404","SJAG_04953","SJAG_02293"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99190,94760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[106165,88982,91859,111565,98211,99842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"}]},"cv_name":"biological_process","definition":"Any process that generates L-methionine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid salvage","termid":"GO:0043102"},{"relation_name":"is_a","term_name":"L-methionine biosynthetic process","termid":"GO:0071265"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00419":null,"SJAG_01404":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_03614":null,"SJAG_03881":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-methionine salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071267","terms_by_termid":{"GO:0019509":null,"GO:1990355":null}}


id: FYPO:0003253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of one or more amino acids into the cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished amino acid import during vegetative growth","synonyms":[{"name":"abolished amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"abolished amino acid import during mitotic cell cycle","type":"related"},{"name":"abolished amino acid import into cell","type":"exact"},{"name":"abolished amino acid uptake","type":"exact"},{"name":"amino acid import abolished","type":"exact"}],"termid":"FYPO:0003253"}


id: MONDO:0019231
data:
  {"annotated_genes":["SJAG_00070","SJAG_04263","SJAG_03934","SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[85874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012073"},{"annotations":[85842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011624"},{"annotations":[85339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014881"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorders of pentose/polyol metabolism","termid":"MONDO:0018605"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_02297":null,"SJAG_03934":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"inborn disorder of pentose phosphate metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:2067324607","GARD:18962","Orphanet:79186","UMLS:C5681279","MEDGEN:1842861"],"synonyms":[{"name":"disorder of pentose phosphate metabolism","type":"related"}],"termid":"MONDO:0019231","terms_by_termid":{"MONDO:0010480":null,"MONDO:0011624":null,"MONDO:0012073":null,"MONDO:0014881":null},"xrefs":{"Monarch":{"xref_id":"0019231"}}}


id: PBO:0043218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic linker associated protein 2","termid":"PBO:0043218"}


id: MONDO:0015799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Smith-McCort dysplasia (SMC) is a rare spondylo-epi-metaphyseal dysplasia characterized by the clinical manifestations of coarse facies, short neck, short trunk dwarfism with barrel-shaped chest and rhizomelic limb shortening, as well as specific radiological features (i.e. generalized platyspondyly with double-humped vertebral end plates and iliac crests with a lace-like appearance) and normal intelligence. The clinical and skeletal features are similar to those seen in the allelic disorder Dyggve-Melchior-Clausen syndrome (DMC), but can be distinguished from this syndrome by the absence of intellectual deficiency and microcephaly in SMC.","definition_xrefs":["Orphanet:178355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Smith-McCort dysplasia","secondary_identifiers":["icd11.foundation:1800275830","GARD:10620","UMLS:C1846431","SCTID:715862006","OMIMPS:607326","MESH:C564589","DOID:0060247","MEDGEN:375887"],"synonyms":[{"name":"Smith McCort dysplasia","type":"related"},{"name":"Smith-McCort dwarfism","type":"related"}],"termid":"MONDO:0015799","xrefs":{"Monarch":{"xref_id":"0015799"}}}


id: PBO:0067002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 6, pseudogene","termid":"PBO:0067002"}


id: GO:0090590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + D-glucosamine(out) = protein histidine + glucosamine-6-phosphate(in).","definition_xrefs":["PMID:8246840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-D-glucosamine phosphotransferase system transporter activity","termid":"GO:0090590"}


id: MONDO:0009459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by indifference to pain despite the ability to distinguish noxious from non-noxious stimuli. Absent corneal reflexes and intellectual disability may be associated. Familial forms with autosomal recessive and autosomal dominant patterns of inheritance have been described. (Adams et al., Principles of Neurology, 6th ed, p1343)","definition_xrefs":["MESH:D000699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"channelopathy-associated congenital insensitivity to pain, autosomal recessive","secondary_identifiers":["Orphanet:88642","GARD:12267","MEDGEN:344563","UMLS:C1855739","OMIM:243000"],"synonyms":[{"name":"CIP","type":"related"},{"name":"HSAN2D","type":"related"},{"name":"HSAN2D, AR","type":"related"},{"name":"asymbolia for pain","type":"related"},{"name":"channelopathy-associated CIP","type":"exact"},{"name":"congenital analgesia, autosomal recessive","type":"related"},{"name":"indifference to pain, congenital, autosomal recessive","type":"related"},{"name":"insensitivity to pain, channelopathy-associated","type":"related"},{"name":"insensitivity to pain, congenital","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type 2D","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type IID","type":"exact"}],"termid":"MONDO:0009459","xrefs":{"Monarch":{"xref_id":"0009459"}}}


id: PBO:0003834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific cyclin Rem1","termid":"PBO:0003834"}


id: FYPO:0007565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter that contains a Mlu1 cell cycle box (MCB) by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:8223442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding","termid":"FYPO:0002003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished DNA binding at MCB","synonyms":[{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding abolished at MCB","type":"exact"},{"name":"abolished DNA binding at Mlu1 cell cycle box","type":"exact"},{"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding at MCB","type":"exact"},{"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding at Mlu1 cell cycle box","type":"exact"}],"termid":"FYPO:0007565"}


id: PBO:0077945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 5-1","termid":"PBO:0077945"}


id: MONDO:0043170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pavone Fiumara Rizzo syndrome","secondary_identifiers":["MESH:C536313","UMLS:C2931172","MEDGEN:419352"],"synonyms":[{"name":"Pavone Fiumara Rizzo syndrome","type":"exact"},{"name":"syndactyly type 1 with cataracts and intellectual disability","type":"related"},{"name":"syndactyly type 1 with cataracts and mental retardation","type":"related"}],"termid":"MONDO:0043170","xrefs":{"Monarch":{"xref_id":"0043170"}}}


id: PBO:0077574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA element modulatory factor 1 pseudogene 1","termid":"PBO:0077574"}


id: PBO:0058547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6126","termid":"PBO:0058547"}


id: MONDO:0033375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome 17","secondary_identifiers":["UMLS:C4693640","DOID:0080289","MEDGEN:1644516","OMIM:617926"],"synonyms":[{"name":"OFD17","type":"related"},{"name":"Ofds 17","type":"related"},{"name":"oral-Facial-digital syndrome, type 17","type":"related"},{"name":"orofaciodigital syndrome XVII","type":"related"}],"termid":"MONDO:0033375","xrefs":{"Monarch":{"xref_id":"0033375"}}}


id: PBO:0028674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_plasma_membrane_to_vacuole_transport_after_nitrogen_starvation","termid":"PBO:0028674"}


id: PBO:0081793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 723","termid":"PBO:0081793"}


id: MONDO:0700101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carcinoma, non-human animal","termid":"MONDO:0700101","xrefs":{"Monarch":{"xref_id":"0700101"}}}


id: GO:0008688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(3-hydroxyphenyl)propionate + NADH + oxygen + H+ = 3-(2,3-dihydroxyphenyl)propionate + NAD+ + H2O.","definition_xrefs":["RHEA:24785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propionate hydroxylase activity","secondary_identifiers":["EC:1.14.13.127","KEGG_REACTION:R06786","MetaCyc:MHPHYDROXY-RXN"],"termid":"GO:0008688"}


id: MONDO:0014733
data:
  {"annotated_genes":["SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85167],"is_not":false,"summary":null,"term":"MONDO:0014733"}]},"cv_name":"mondo","definition":"SURF1-related Charcot-Marie-Tooth disease type 4 (CMT4K) is a subtype of Charcot-Marie-Tooth disease type 4 characterized by childhood onset of severe, progressive, demyelinating sensorimotor neuropathy manifesting with distal muscle weakness and atrophy of hands and feet, distal sensory impairment (vibration and pinprick) of lower limbs, lactic acidosis, areflexia and severely reduced motor nerve conduction velocities (25 m/s or less). Patients may also present kyphoscoliosis, nystagmus, hearing loss, cerebellar ataxia and/or brain MRI abnormalities (putaminal and periaqueductal lesions).","definition_xrefs":["Orphanet:391351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 4","termid":"MONDO:0018995"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4K","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225246","GARD:17616","MEDGEN:895560","OMIM:616684","DOID:0110187","SCTID:765047006"],"synonyms":[{"name":"CMT4K","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4 caused by mutation in SURF1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4K","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, autosomal recessive, type 4K","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4K","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4k","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, demyelinating, autosomal recessive, type 4K","type":"related"},{"name":"SURF1 Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"SURF1-related CMT4","type":"exact"},{"name":"SURF1-related Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"SURF1-related severe demyelinating Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth disease type 4K","type":"exact"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth neuropathy type 4K","type":"exact"}],"termid":"MONDO:0014733","terms_by_termid":{"MONDO:0014733":null},"xrefs":{"Monarch":{"xref_id":"0014733"}}}


id: PBO:0058750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6874","termid":"PBO:0058750"}


id: PBO:0030134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_zinc_level","termid":"PBO:0030134"}


id: GO:0047932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosamine + acetyl-CoA = N-acetyl-D-glucosamine + CoA + H+.","definition_xrefs":["RHEA:21332","EC:2.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"glucosamine N-acetyltransferase activity","secondary_identifiers":["MetaCyc:GLUCOSAMINE-N-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R01204"],"synonyms":[{"name":"acetyl-CoA:D-glucosamine N-acetyltransferase activity","type":"related"},{"name":"glucosamine acetylase activity","type":"related"},{"name":"glucosamine acetyltransferase activity","type":"related"}],"termid":"GO:0047932"}


id: PBO:0077932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 5","termid":"PBO:0077932"}


id: PBO:0051484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 1","termid":"PBO:0051484"}


id: GO:0052360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont macromolecule (obsolete GO:0052360)","termid":"GO:0052360"}


id: PR:Q10348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endonuclease V that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01577","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease C1F12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.06c","secondary_identifiers":["UniProtKB:Q10348"],"synonyms":[{"name":"Spom972h-ENDOV","type":"exact"}],"termid":"PR:Q10348"}


id: MONDO:0003967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bone osteosarcoma affecting multiple skeletal sites, with multifocal lesions discovered within 6 months of the appearance of the initial tumor. It has a poor prognosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multifocal osteogenic sarcoma","termid":"MONDO:0002622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"synchronous multifocal osteogenic sarcoma","secondary_identifiers":["DOID:6696","UMLS:C1336544","MEDGEN:236965","NCIT:C6471"],"synonyms":[{"name":"synchronous multifocal osteosarcoma","type":"exact"}],"termid":"MONDO:0003967","xrefs":{"Monarch":{"xref_id":"0003967"}}}


id: GO:0061647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 at a lysine in position 9 of the histone.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 modification (obsolete GO:0061647)","termid":"GO:0061647"}


id: PR:G2TRP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam7 gene.","definition_xrefs":["UniProtKB:G2TRP0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.23","synonyms":[{"name":"Spom972h-tam7","type":"exact"},{"name":"transcripts altered in meiosis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRP0"}


id: PBO:0044006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein alpha s2 like A, pseudogene","termid":"PBO:0044006"}


id: PATO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of cerebral spinal fluid.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edematous","termid":"PATO:0001450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalic","termid":"PATO:0001853"}


id: PBO:0072925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 6","termid":"PBO:0072925"}


id: MONDO:0100230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of plasmalogens biosynthesis, that is an autosomal dominant neurological disorder that results in uncontrolled synthesis of ether lipids.","definition_xrefs":["PMID:37236006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"fatty acyl-CoA reductase defects","termid":"MONDO:0100275"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0000426","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"fatty acyl-CoA reductase 1 upregulation","synonyms":[{"name":"FAR1 upregulation","type":"exact"},{"name":"fatty acyl-CoA reductase 1 upregulation","type":"exact"}],"termid":"MONDO:0100230","xrefs":{"Monarch":{"xref_id":"0100230"}}}


id: PBO:0079852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B1, TLR signaling regulator","termid":"PBO:0079852"}


id: MONDO:0016016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toluene embryopathy is a neurodevelopmental teratologic syndrome due to prenatal exposure to toluene. The disease is characterized by prematurity, low birth weight, dysmorphic features (short palpebral fissures, deep set eyes, low set ears, mid-facial hypoplasia, flat nasal bridge, thin upper lip, micrognathia, spatulate fingertips and small fingernails), central nervous system dysfunctions (intellectual disability, microcephaly, language impairment, hyperactivity, visual dysfunction) and postnatal growth delay. Prenatal exposure to toluene occurs as a result of incidental occupational exposure or solvent abuse during pregnancy. The features of toluene embryopathy often overlap with those seen in fetal alcohol syndrome.","definition_xrefs":["Orphanet:1920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"toluene embryopathy","secondary_identifiers":["UMLS:C2931737","MEDGEN:444131","MESH:C538114","GARD:18751","icd11.foundation:1446076607"],"synonyms":[{"name":"Hersh Podruch Weisskopk syndrome","type":"related"},{"name":"microcephaly, central nervous system dysfunction, minor craniofacial and limb anomalies, and variable growth deficiency","type":"related"},{"name":"toluene embryopathy","type":"exact"}],"termid":"MONDO:0016016","xrefs":{"Monarch":{"xref_id":"0016016"}}}


id: MONDO:0030893
data:
  {"annotated_genes":["SJAG_00488","SJAG_04409"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84936,84937],"is_not":false,"summary":null,"term":"MONDO:0030893"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00488":null,"SJAG_04409":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, progressive, infantile-onset, with or without deafness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619147","UMLS:C5542996","MEDGEN:1779519"],"synonyms":[{"name":"LEPID","type":"exact"}],"termid":"MONDO:0030893","terms_by_termid":{"MONDO:0030893":null},"xrefs":{"Monarch":{"xref_id":"0030893"}}}


id: PBO:0072400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 5","termid":"PBO:0072400"}


id: GO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of one Arg-Ile bond in factor X to form factor Xa, and on factor IX to form factor IXa beta.","definition_xrefs":["PMID:12496253"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor VIIa activity (obsolete GO:0003802)","synonyms":[{"name":"activated blood coagulation factor VII","type":"related"},{"name":"blood coagulation factor VII activity","type":"exact"},{"name":"blood-coagulation factor VIIa","type":"related"},{"name":"coagulation factor VIIa activity","type":"exact"}],"termid":"GO:0003802"}


id: MOD:01574
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01574"}


id: PBO:0084477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone alpha-factor, made by alpha cells; interacts with mating type a cells to induce cell cycle arrest and other responses leading to mating; also encoded by MF(ALPHA)2, although MF(ALPHA)1 produces most alpha-factor; binds copper(II) ions","termid":"PBO:0084477"}


id: MONDO:0004053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the Bartholin gland and is characterized by the presence of malignant squamous epithelial cells.","definition_xrefs":["NCIT:C40293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bartholin gland carcinoma","termid":"MONDO:0002829"},{"relation_name":"is_a","term_name":"vulvar squamous cell carcinoma","termid":"MONDO:0024609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bartholin gland squamous cell carcinoma","secondary_identifiers":["DOID:6961","MEDGEN:307249","UMLS:C1511052"],"synonyms":[{"name":"Bartholin's gland squamous cell carcinoma","type":"exact"},{"name":"bartholin gland squamous cell carcinoma","type":"exact"},{"name":"major vestibular gland squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004053","xrefs":{"Monarch":{"xref_id":"0004053"}}}


id: MONDO:0001438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinflammatory pulmonary fibrosis","secondary_identifiers":["UMLS:C0175999","DOID:12123","SCTID:266368002","MEDGEN:511625","ICD9:515"],"synonyms":[{"name":"post-inflammatory pulmonary fibrosis","type":"exact"},{"name":"postinflammatory pulmonary fibrosis","type":"exact"}],"termid":"MONDO:0001438","xrefs":{"Monarch":{"xref_id":"0001438"}}}


id: GO:0070671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-12","synonyms":[{"name":"response to IL-12","type":"exact"}],"termid":"GO:0070671"}


id: SO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized inside the cytoplasm.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramembrane_polypeptide_region","termid":"SO:0001072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cytoplasmic_polypeptide_region","secondary_identifiers":["BS:00145"],"synonyms":[{"name":"cytoplasm_location","type":"exact"},{"name":"cytoplasmic polypeptide region","type":"exact"},{"name":"inside","type":"related"}],"termid":"SO:0001073"}


id: GO:0008792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H+ = agmatine + CO2.","definition_xrefs":["EC:4.1.1.19","RHEA:17641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"arginine decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R00566","MetaCyc:ARGDECARBOX-RXN","Reactome:R-HSA-350598"],"synonyms":[{"name":"L-arginine carboxy-lyase (agmatine-forming)","type":"related"},{"name":"L-arginine carboxy-lyase activity","type":"related"},{"name":"SpeA","type":"related"}],"termid":"GO:0008792"}


id: GO:1904138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["GO_REF:0000058","GOC:dph","PMID:24892953","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in notochord morphogenesis","synonyms":[{"name":"activation of convergent extension involved in notochord morphogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in notochord morphogenesis","type":"exact"}],"termid":"GO:1904138"}


id: PBO:0050036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 4","termid":"PBO:0050036"}


id: PBO:0033790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_kinetochore_sliding_during_chromosome_recapture","termid":"PBO:0033790"}


id: PBO:0039880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 39","termid":"PBO:0039880"}


id: MONDO:0030917
data:
  {"annotated_genes":["SJAG_01146"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84342],"is_not":false,"summary":null,"term":"MONDO:0030917"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 51","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080232","UMLS:C4540474","OMIM:617788","MEDGEN:1625009"],"synonyms":[{"name":"MRD51","type":"related"},{"name":"autosomal dominant intellectual disability 51","type":"related"},{"name":"autosomal dominant mental retardation 51","type":"related"},{"name":"intellectual disability, autosomal dominant 51","type":"exact"},{"name":"mental retardation, autosomal dominant 51","type":"related"}],"termid":"MONDO:0030917","terms_by_termid":{"MONDO:0030917":null},"xrefs":{"Monarch":{"xref_id":"0030917"}}}


id: GO:0038008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intracellular process in which a signal is passed on to downstream components within the cell via a tumor necrosis factor receptor-associated factor (TRAF). TRAFs are directly or indirectly recruited to the intracellular domains of cell surface receptors, and engage other signaling proteins to transfer the signal from a cell surface receptor to other intracellular signaling components.","definition_xrefs":["PMID:20596822","PMID:19918944","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAF-mediated signal transduction (obsolete GO:0038008)","synonyms":[{"name":"TRAF signaling","type":"exact"},{"name":"TRAF-mediated intracellular signaling","type":"exact"},{"name":"TRAF-mediated signaling","type":"exact"},{"name":"TRAF-mediated signalling","type":"exact"},{"name":"tumor necrosis factor receptor-associated factor signal transduction","type":"exact"},{"name":"tumor necrosis factor receptor-associated factor signaling","type":"exact"}],"termid":"GO:0038008"}


id: SO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a nuclear pseudogene of a mitochndrial gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000899 nuclear_mitochondrial (obsolete SO:0000899)","synonyms":[{"name":"nuclear mitochondrial","type":"exact"}],"termid":"SO:0000899"}


id: PBO:0030778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mercaptoethanol","termid":"PBO:0030778"}


id: GO:0021908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","PMID:11262869","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in spinal cord anterior/posterior pattern formation (obsolete GO:0021908)","synonyms":[{"name":"retinoic acid receptor signalling pathway in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021908"}


id: GO:1904127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in somitogenesis.","definition_xrefs":["PMID:24892953","GOC:TermGenie","GO_REF:0000058","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in axis elongation","termid":"GO:1901232"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"regulates","term_name":"convergent extension involved in somitogenesis","termid":"GO:0090246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in somitogenesis","termid":"GO:1904127"}


id: PBO:0087736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; the SMC5-SMC6 complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; binds single-stranded DNA and has ATPase activity; supports nucleolar function; S. pombe homolog forms a heterodimer with S. pombe Rad18p that is involved in DNA repair","termid":"PBO:0087736"}


id: GO:1903645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chaperone-mediated protein folding.","definition_xrefs":["GOC:TermGenie","PMID:24375412","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein folding","termid":"GO:1903333"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated protein folding","termid":"GO:1903644"},{"relation_name":"negatively_regulates","term_name":"chaperone-mediated protein folding","termid":"GO:0061077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006457"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"negative regulation of chaperone-mediated protein folding","synonyms":[{"name":"down regulation of chaperone-mediated protein folding","type":"exact"},{"name":"down-regulation of chaperone-mediated protein folding","type":"exact"},{"name":"downregulation of chaperone-mediated protein folding","type":"exact"},{"name":"inhibition of chaperone-mediated protein folding","type":"narrow"}],"termid":"GO:1903645"}


id: GO:0045584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cytotoxic T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell differentiation","termid":"GO:0045583"},{"relation_name":"negatively_regulates","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cytotoxic T cell differentiation","synonyms":[{"name":"down regulation of cytotoxic T cell differentiation","type":"exact"},{"name":"down-regulation of cytotoxic T cell differentiation","type":"exact"},{"name":"downregulation of cytotoxic T cell differentiation","type":"exact"},{"name":"inhibition of cytotoxic T cell differentiation","type":"narrow"},{"name":"negative regulation of cytotoxic T cell development","type":"related"},{"name":"negative regulation of cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of cytotoxic T-cell differentiation","type":"exact"},{"name":"negative regulation of cytotoxic T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045584"}


id: GO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in beta-gentiobiose.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-gentiobiose beta-glucosidase activity","termid":"GO:0080083"}


id: PBO:0061732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 5","termid":"PBO:0061732"}


id: PBO:0069657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 934, pseudogene","termid":"PBO:0069657"}


id: GO:0098598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vocalisation behavior that is the result of learning, or the process by which new vocalizations are learned.","definition_xrefs":["GOC:dos","PMID:17035521","GOC:BHF","GOC:rl","PMID:16418265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning or memory","termid":"GO:0007611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learned vocalization behavior or vocal learning","termid":"GO:0098598"}


id: GO:0021995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of joining together the neural folds at either end of the neural tube.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuropore closure","termid":"GO:0021995"}


id: MONDO:1012404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"invasive transitional cell carcinoma, non-human animal","termid":"MONDO:1011818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasive transitional cell carcinoma, dog","secondary_identifiers":["OMIA:001512-9615"],"termid":"MONDO:1012404","xrefs":{"Monarch":{"xref_id":"1012404"}}}


id: MONDO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tuberculosis that occurs at body sites other than the lung.","definition_xrefs":["DOID:0050598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extrapulmonary tuberculosis","secondary_identifiers":["UMLS:C0679362","SCTID:423997002","MEDGEN:671310"],"termid":"MONDO:0000368","xrefs":{"Monarch":{"xref_id":"0000368"}}}


id: GO:0016229
data:
  {"annotated_genes":["SJAG_03235","SJAG_04124","SJAG_02855","SJAG_01326","SJAG_04954","SJAG_02291"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100995,116668],"is_not":false,"summary":null,"term":"GO:0016229"},{"annotations":[103867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000253"},{"annotations":[109235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000252"},{"annotations":[61122,99852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which one substrate is a sterol derivative.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01326":null,"SJAG_02291":null,"SJAG_02855":null,"SJAG_03235":null,"SJAG_04124":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"steroid dehydrogenase activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0016229","terms_by_termid":{"GO:0000252":null,"GO:0000253":null,"GO:0003865":null,"GO:0016229":null}}


id: GO:0043047
data:
  {"annotated_genes":["SJAG_02194","SJAG_02362","SJAG_04245","SJAG_00939","SJAG_05214","SJAG_04863","SJAG_01677","SJAG_03855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88388,94288,95263,107277,109518,110676,110701,113745],"is_not":false,"summary":null,"term":"GO:0043047"},{"annotations":[94287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded telomere-associated DNA.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric DNA binding","termid":"GO:0042162"},{"relation_name":"is_a","term_name":"sequence-specific single stranded DNA binding","termid":"GO:0098847"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03855":null,"SJAG_04245":null,"SJAG_04863":null,"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"single-stranded telomeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomeric ssDNA binding","type":"exact"}],"termid":"GO:0043047","terms_by_termid":{"GO:0043047":null,"GO:0098505":null}}


id: GO:1903681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["GOC:als","GO_REF:0000058","PMID:18394891","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"}


id: MONDO:0012144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome type 2 in which the cause of the disease is a mutation in the SNAI2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2D","secondary_identifiers":["DOID:0110952","MEDGEN:323102","UMLS:C1837203","MESH:C563839","OMIM:608890"],"synonyms":[{"name":"SNAI2 Waardenburg syndrome type 2","type":"exact"},{"name":"WS2D","type":"exact"},{"name":"Waardenburg syndrome type 2 caused by mutation in SNAI2","type":"exact"},{"name":"Waardenburg syndrome type IID","type":"exact"},{"name":"Waardenburg syndrome, type 2D","type":"related"}],"termid":"MONDO:0012144","xrefs":{"Monarch":{"xref_id":"0012144"}}}


id: GO:0043844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + D-fructose 6-phosphate = AMP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"ADP-specific phosphofructokinase activity","secondary_identifiers":["RHEA:20105"],"synonyms":[{"name":"ADP-6-phosphofructokinase activity","type":"related"},{"name":"ADP-Pfk activity","type":"related"},{"name":"ADP-dependent phosphofructokinase activity","type":"related"},{"name":"ADP:D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0043844"}


id: PR:Q1MTP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iss9 gene.","definition_xrefs":["UniProtKB:Q1MTP1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THP3 homolog C2A9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.11c","synonyms":[{"name":"Spom972h-iss9","type":"exact"}],"termid":"PR:Q1MTP1"}


id: MONDO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of a rapid grossly irregular ventricular rhythm with marked variability in QRS cycle length, morphology, and amplitude. The rate is typically greater than 300 bpm. (CDISC)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ventricular fibrillation","secondary_identifiers":["HP:0001663","NANDO:2200227","MEDGEN:21844","MESH:D014693","NANDO:2100052","ICD9:427.41","icd11.foundation:1662472992","EFO:0004287","NCIT:C50799","SCTID:71908006","UMLS:C0042510"],"synonyms":[{"name":"VF","type":"exact"},{"name":"VFib","type":"exact"},{"name":"fibrillation, ventricular","type":"exact"},{"name":"ventricular fibrillation","type":"exact"},{"name":"ventricular fibrillation (disease)","type":"exact"}],"termid":"MONDO:0000190","xrefs":{"Monarch":{"xref_id":"0000190"}}}


id: PBO:0042007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 62","termid":"PBO:0042007"}


id: FYPO:0006286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of protein complexes consisting of cyclin B1 and cyclin-dependent kinase 1 (CDK1).","definition_xrefs":["PMID:7796804","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"},{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cyclin B1-CDK1 complex level","synonyms":[{"name":"cyclin B1-CDK1 complexes present at normal level","type":"exact"},{"name":"normal cyclin B1-CDK1 complex level during mitotic cell cycle","type":"related"},{"name":"normal cyclin B1-CDK1 complex level during vegetative growth","type":"exact"}],"termid":"FYPO:0006286"}


id: GO:0100069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates neuron apoptotic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of neuron apoptotic process by transcription from RNA polymerase II promoter (obsolete GO:0100069)","termid":"GO:0100069"}


id: GO:0120042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage proliferation.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"is_a","term_name":"regulation of macrophage proliferation","termid":"GO:0120040"},{"relation_name":"negatively_regulates","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage proliferation","termid":"GO:0120042"}


id: PBO:0074118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 4","termid":"PBO:0074118"}


id: GO:1901807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving capsanthin.","definition_xrefs":["GOC:yaf","PMID:10995282","GOC:TermGenie","UniPathway:UPA00806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"capsanthin metabolic process","synonyms":[{"name":"capsanthin metabolism","type":"exact"}],"termid":"GO:1901807"}


id: PR:O13764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome assembly factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23077:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ATPase pex6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.01","secondary_identifiers":["UniProtKB:O13764"],"synonyms":[{"name":"SPAC17A5.01","type":"related"},{"name":"Spom972h-PEX6","type":"exact"},{"name":"peroxin-6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisome biosynthesis protein pex6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13764"}


id: MONDO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome Xq duplication is a chromosome abnormality that affects many different parts of the body. People with this condition have an extra copy of the genetic material located on the long arm (q) of the X chromosome in each cell. The severity of the condition and the associated signs and symptoms vary based on the size and location of theduplication;the genes involved; and the sex of the affected person. In general, males are typically more severely affected than females and often experience intellectual disability, developmental delay, short stature, abnormalities of the reproductive organs, anddistinctive craniofacial features. Many females with this duplication do not have any symptoms or are only affected with short stature; however, some may be just as severely affected as males with the condition. Most cases are inherited in an X-linked manner, often from a mother with no signs or symptoms of the condition. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome X","termid":"MONDO:0017008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome X","secondary_identifiers":["MEDGEN:162887","Orphanet:263783","GARD:5369","MESH:C536732","UMLS:C0795891"],"synonyms":[{"name":"Duplication Xq","type":"related"},{"name":"Xq duplication","type":"related"},{"name":"Xq trisomy","type":"related"},{"name":"chromosome Xq duplication","type":"related"},{"name":"partial duplication of chromosome Xq","type":"exact"},{"name":"partial duplication of the long arm of chromosome type X","type":"exact"},{"name":"partial trisomy Xq","type":"related"},{"name":"partial trisomy of chromosome Xq","type":"exact"},{"name":"partial trisomy of the long arm of chromosome X","type":"exact"},{"name":"trisomy Xq","type":"related"}],"termid":"MONDO:0017010","xrefs":{"Monarch":{"xref_id":"0017010"}}}


id: FYPO:0006377
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"abnormal protein localisation to endoplasmic reticulum","type":"exact"},{"name":"abnormal protein localization to ER","type":"exact"}],"termid":"FYPO:0006377","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: GO:0150052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynapse assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynapse.","definition_xrefs":["PMID:16394100","GOC:aruk","PMID:16672654","GOC:bc","PMID:28185854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"regulation of postsynapse organization","termid":"GO:0099175"},{"relation_name":"regulates","term_name":"postsynapse assembly","termid":"GO:0099068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynapse assembly","termid":"GO:0150052"}


id: PR:Q11119
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.06c","secondary_identifiers":["UniProtKB:Q11119"],"synonyms":[{"name":"SPBC6B1.06c","type":"related"},{"name":"Spom972h-USP5","type":"exact"},{"name":"UBA domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"deubiquitinating enzyme 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ucp2","type":"related"}],"termid":"PR:Q11119"}


id: GO:0006078
data:
  {"annotated_genes":["SJAG_02446","SJAG_02590","SJAG_04073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89804,93415,101637],"is_not":false,"summary":null,"term":"GO:0006078"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->6)-beta-D-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->6)-beta-D-glucan metabolic process","termid":"GO:0006077"},{"relation_name":"is_a","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02446":null,"SJAG_02590":null,"SJAG_04073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,6-beta-glucan anabolism","type":"exact"},{"name":"1,6-beta-glucan biosynthesis","type":"exact"},{"name":"1,6-beta-glucan biosynthetic process","type":"exact"},{"name":"1,6-beta-glucan formation","type":"exact"},{"name":"1,6-beta-glucan synthesis","type":"exact"},{"name":"beta-1,6 glucan anabolism","type":"exact"},{"name":"beta-1,6 glucan biosynthesis","type":"exact"},{"name":"beta-1,6 glucan biosynthetic process","type":"exact"},{"name":"beta-1,6 glucan formation","type":"exact"},{"name":"beta-1,6 glucan synthesis","type":"exact"}],"termid":"GO:0006078","terms_by_termid":{"GO:0006078":null}}


id: PR:Q9P7M4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPAP27G11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.14c","synonyms":[{"name":"Spom972h-SPAP27G11.14c","type":"exact"}],"termid":"PR:Q9P7M4"}


id: GO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamyl alcohol + NADP+ = cinnamaldehyde + NADPH + H+. Also acts on coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.","definition_xrefs":["EC:1.1.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cinnamyl-alcohol dehydrogenase activity","secondary_identifiers":["MetaCyc:CINNAMYL-ALCOHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"CAD activity","type":"broad"},{"name":"cinnamyl alcohol dehydrogenase activity","type":"related"},{"name":"cinnamyl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0045551"}


id: GO:2000457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 17 cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000451"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell extravasation","termid":"GO:2000455"},{"relation_name":"positively_regulates","term_name":"T-helper 17 cell extravasation","termid":"GO:0035699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 17 cell extravasation","termid":"GO:2000457"}


id: MOD:01291
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00464. Remap to MOD:00464.","definition_xrefs":["PubMed:6273432","PubMed:9252331","Unimod:425","PubMed:12686488","PubMed:12643539"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01291 dihydroxylated residue - site W (obsolete MOD:01291)","synonyms":[{"name":"Dioxidation","type":"related"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:01291"}


id: MONDO:0003548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast carcinoma characterized by the presence of tubular and glandular neoplastic cell structures, admixed with islands of neoplastic cells showing squamous differentiation.","definition_xrefs":["NCIT:C40361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell breast carcinoma","termid":"MONDO:0006056"},{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous breast carcinoma","secondary_identifiers":["UMLS:C1510796","ONCOTREE:MASC","DOID:5623","MEDGEN:267645"],"synonyms":[{"name":"adenosquamous breast carcinoma","type":"exact"},{"name":"breast adenosquamous carcinoma","type":"exact"},{"name":"metaplastic adenosquamous carcinoma","type":"related"}],"termid":"MONDO:0003548","xrefs":{"Monarch":{"xref_id":"0003548"}}}


id: GO:0045487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin metabolic process","termid":"GO:0009685"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"gibberellin catabolic process","synonyms":[{"name":"gibberellic acid breakdown","type":"narrow"},{"name":"gibberellic acid catabolic process","type":"narrow"},{"name":"gibberellic acid catabolism","type":"narrow"},{"name":"gibberellic acid degradation","type":"narrow"},{"name":"gibberellin catabolism","type":"exact"}],"termid":"GO:0045487"}


id: MONDO:0100514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ovarian carcinoma that has developed in relatives of patients that have a history of ovarian carcinoma.","definition_xrefs":["NCIT:C36102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"},{"relation_name":"is_a","term_name":"familial ovarian cancer","termid":"MONDO:0016248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial ovarian carcinoma","secondary_identifiers":["DOID:6901","MEDGEN:272713","UMLS:C1333992"],"synonyms":[{"name":"familial ovarian carcinoma","type":"exact"},{"name":"familiar ovarian carcinoma","type":"related"},{"name":"hereditary ovarian cancer","type":"broad"},{"name":"hereditary ovarian carcinoma","type":"exact"}],"termid":"MONDO:0100514","xrefs":{"Monarch":{"xref_id":"0100514"}}}


id: GO:1904157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN4 thymocyte. A DN4 thymocyte is a CD4-,CD8- thymocyte that is also CD44-,CD25-.","definition_xrefs":["GOC:TermGenie","GO_REF:0000086","PMID:25398325","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN4 thymocyte differentiation","termid":"GO:1904157"}


id: GO:0039623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=25 symmetry. The T=25 capsid is composed of 12 pentameric and 240 hexameric capsomeres.","definition_xrefs":["VZ:810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=25 icosahedral viral capsid","termid":"GO:0039623"}


id: MONDO:0016565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","secondary_identifiers":["Orphanet:240371"],"synonyms":[{"name":"syndrome associated with obesity (disease)","type":"exact"},{"name":"syndromic obesity (disease)","type":"exact"}],"termid":"MONDO:0016565","xrefs":{"Monarch":{"xref_id":"0016565"}}}


id: MONDO:0001892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin or Hodgkin lymphoma that arises in the spinal cord as a primary lesion.","definition_xrefs":["NCIT:C5157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary central nervous system lymphoma","termid":"MONDO:0002571"},{"relation_name":"is_a","term_name":"spinal cord cancer","termid":"MONDO:0003544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"spinal cord lymphoma","secondary_identifiers":["DOID:14150","MEDGEN:236836","UMLS:C1336044"],"synonyms":[{"name":"lymphoma of spinal cord","type":"exact"},{"name":"lymphoma of the spinal cord","type":"exact"},{"name":"primary spinal cord lymphoma","type":"exact"},{"name":"spinal cord cancer","type":"related"},{"name":"spinal cord lymphoma","type":"exact"}],"termid":"MONDO:0001892","xrefs":{"Monarch":{"xref_id":"0001892"}}}


id: FYPO:0006720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to osmotic stress is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to osmotic stress.","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to osmotic stress","synonyms":[{"name":"normal cell cycle delay following osmotic stress","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to osmotic stress","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006720"}


id: FYPO:0000380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished macroautophagy","synonyms":[{"name":"abolished autophagy","type":"broad"},{"name":"absent macroautophagy","type":"exact"},{"name":"autophagy: absent","type":"broad"},{"name":"macroautophagy abolished","type":"exact"}],"termid":"FYPO:0000380"}


id: MONDO:1010160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndactyly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly, non-human animal","secondary_identifiers":["OMIA:000963"],"termid":"MONDO:1010160","xrefs":{"Monarch":{"xref_id":"1010160"}}}


id: PBO:0025431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-I ortholog Mis6","termid":"PBO:0025431"}


id: MONDO:0019986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sporadic idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"sporadic idiopathic steroid-resistant nephrotic syndrome with collapsing glomerulopathy","secondary_identifiers":["Orphanet:97555"],"termid":"MONDO:0019986","xrefs":{"Monarch":{"xref_id":"0019986"}}}


id: MONDO:0054770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Orofaciodigital syndrome 18 (OFD18) is characterized by short stature, brachymesophalangy, pre- and postaxial polysyndactyly, and stocky femoral necks, as well as oral anomalies and dysmorphic facial features.","definition_xrefs":["OMIM:617927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome 18","secondary_identifiers":["DOID:0060961","UMLS:C5567903","Orphanet:508501","MEDGEN:1799326"],"synonyms":[{"name":"OFD18","type":"exact"},{"name":"Ofds 18","type":"exact"},{"name":"oral-facial-digital syndrome type 18","type":"exact"},{"name":"oral-facial-digital syndrome with short stature and brachymesophalangy","type":"exact"},{"name":"orofaciodigital syndrome XVIII","type":"exact"},{"name":"orofaciodigital syndrome type 18","type":"exact"}],"termid":"MONDO:0054770","xrefs":{"Monarch":{"xref_id":"0054770"}}}


id: PBO:0052715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 7","termid":"PBO:0052715"}


id: PATO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having reacted with oxygen, or been modified by oxidation (the reaction in which the atoms of an element lose electrons and the valence of the element increases).","definition_xrefs":["Wikipedia:http://en.wiktionary.org/wiki/oxidized"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized","termid":"PATO:0002223"}


id: PBO:0082119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylornithine aminotransferase; catalyzes the fourth step in the biosynthesis of the arginine precursor ornithine","termid":"PBO:0082119"}


id: PBO:0050237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 15","termid":"PBO:0050237"}


id: PBO:0071491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 32","termid":"PBO:0071491"}


id: PBO:0074241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 52 member 1","termid":"PBO:0074241"}


id: PBO:0068790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 27, pseudogene","termid":"PBO:0068790"}


id: PBO:0061560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase domain containing 2","termid":"PBO:0061560"}


id: PBO:0059129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH6 divergent transcript","termid":"PBO:0059129"}


id: GO:0071166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a ribonucleoprotein complex is transported to, or maintained in, a specific location within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ribonucleoprotein complex localization","synonyms":[{"name":"RNP localization","type":"exact"},{"name":"cellular ribonucleoprotein complex localization","type":"exact"},{"name":"establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:0071166"}


id: PBO:0039720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3B","termid":"PBO:0039720"}


id: PBO:0052961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 1","termid":"PBO:0052961"}


id: GO:0044129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the symbiont activates or maintains its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development of symbiont in host","termid":"GO:0044127"},{"relation_name":"is_a","term_name":"positive regulation of formation of structure involved in a symbiotic process","termid":"GO:0044149"},{"relation_name":"positively_regulates","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of development of symbiont in host","termid":"GO:0044129"}


id: PBO:0055866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein associated protein 1","termid":"PBO:0055866"}


id: GO:0048465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corolla over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corolla development","termid":"GO:0048465"}


id: GO:0016499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with orexin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"orexin receptor activity","termid":"GO:0016499"}


id: GO:0097089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methyl-branched fatty acids, aliphatic monocarboxylic acids with methyl branches on the main chain.","definition_xrefs":["PMID:19933331","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methyl-branched fatty acid metabolic process","synonyms":[{"name":"methyl-branched fatty acid metabolism","type":"exact"}],"termid":"GO:0097089"}


id: MONDO:0003828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hormonally functioning or non-functioning pituitary gland adenocarcinoma that produces growth hormone. It may be associated with acromegaly.","definition_xrefs":["NCIT:C5963"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"functioning pituitary gland neoplasm","termid":"MONDO:0003604"},{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"pituitary cancer","termid":"MONDO:0002109"},{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"growth hormone-producing pituitary gland neoplasm","termid":"MONDO:0019927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"growth hormone-producing pituitary gland carcinoma","secondary_identifiers":["DOID:6256","MEDGEN:277331","UMLS:C1334587"],"synonyms":[{"name":"Growth hormone producing pituitary gland carcinoma","type":"exact"},{"name":"Growth hormone-producing pituitary gland carcinoma","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of pituitary","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of the pituitary","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing pituitary gland neoplasm","type":"exact"},{"name":"malignant Growth hormone producing pituitary gland tumor","type":"exact"},{"name":"malignant Growth hormone producing pituitary gland tumour","type":"exact"},{"name":"malignant Growth hormone producing pituitary neoplasm","type":"exact"},{"name":"malignant Growth hormone producing pituitary tumor","type":"exact"},{"name":"malignant Growth hormone producing pituitary tumour","type":"exact"},{"name":"malignant Growth hormone producing tumor","type":"exact"},{"name":"malignant Growth hormone producing tumor of pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumor of pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing tumor of the pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumor of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing tumour","type":"exact"},{"name":"malignant Growth hormone producing tumour of pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumour of pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing tumour of the pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumour of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of pituitary","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant Growth hormone secreting pituitary gland tumor","type":"exact"},{"name":"malignant Growth hormone secreting pituitary gland tumour","type":"exact"},{"name":"malignant Growth hormone secreting pituitary neoplasm","type":"exact"},{"name":"malignant Growth hormone secreting pituitary tumor","type":"exact"},{"name":"malignant Growth hormone secreting pituitary tumour","type":"exact"},{"name":"malignant Growth hormone secreting tumor of pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumor of pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting tumor of the pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting tumour of pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumour of pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting tumour of the pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant Somatotrophinoma of pituitary","type":"exact"},{"name":"malignant Somatotrophinoma of pituitary gland","type":"exact"},{"name":"malignant Somatotrophinoma of the pituitary gland","type":"exact"},{"name":"malignant pituitary Somatotrophinoma","type":"exact"},{"name":"malignant pituitary gland Somatotrophinoma","type":"exact"},{"name":"malignant pituitary gland somatotropinoma","type":"exact"},{"name":"malignant pituitary somatotropinoma","type":"exact"},{"name":"malignant somatotropinoma","type":"exact"},{"name":"malignant somatotropinoma of pituitary","type":"exact"},{"name":"malignant somatotropinoma of pituitary gland","type":"exact"},{"name":"malignant somatotropinoma of the pituitary","type":"exact"},{"name":"malignant somatotropinoma of the pituitary gland","type":"exact"}],"termid":"MONDO:0003828","xrefs":{"Monarch":{"xref_id":"0003828"}}}


id: GO:0090704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + UDP-D-glucose = O-D-glucosylnicotinate + UDP.","definition_xrefs":["GOC:tb","PMID:26116607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"nicotinate-O-glucosyltransferase activity","termid":"GO:0090704"}


id: MONDO:0013120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 5","secondary_identifiers":["OMIM:613080","MESH:C567766","GARD:15611","MEDGEN:414349","DOID:0111776","UMLS:C2751317"],"synonyms":[{"name":"46,XY SEX reversal 5","type":"related"},{"name":"46,XY Sex reversal type 5","type":"exact"},{"name":"46,XY Sex reversal, Cbx2-related","type":"related"},{"name":"46,XY gonadal dysgenesis, complete, Cbx2-related","type":"related"},{"name":"46,XY sex reversal 5","type":"exact"},{"name":"46XY sex reversal 5","type":"exact"},{"name":"SRXY5","type":"related"},{"name":"Sex reversal, XY, Cbx2-related","type":"related"},{"name":"disorder of Sex development, 46,XY, Cbx2-related","type":"related"}],"termid":"MONDO:0013120","xrefs":{"Monarch":{"xref_id":"0013120"}}}


id: PBO:0078358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-1","termid":"PBO:0078358"}


id: MONDO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal hyperplasia (obsolete MONDO:0000161)","synonyms":[{"name":"obsolete adrenal hyperplasia (disease)","type":"exact"}],"termid":"MONDO:0000161","xrefs":{"Monarch":{"xref_id":"0000161"}}}


id: PR:Q10290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mal2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein mal2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.14","synonyms":[{"name":"Spom972h-mal2","type":"exact"},{"name":"sim4 complex subunit mal2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10290"}


id: GO:0033135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-serine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-serine phosphorylation","termid":"GO:0033135"}


id: GO:1900233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-species biofilm formation on inanimate substrate.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of single-species biofilm formation","termid":"GO:1900192"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation on inanimate substrate","termid":"GO:1900231"},{"relation_name":"positively_regulates","term_name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-species biofilm formation on inanimate substrate","synonyms":[{"name":"activation of single-species biofilm formation on inanimate substrate","type":"narrow"},{"name":"up regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"up-regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"upregulation of single-species biofilm formation on inanimate substrate","type":"exact"}],"termid":"GO:1900233"}


id: MONDO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"occlusion precerebral artery","termid":"MONDO:0003718"},{"relation_name":"is_a","term_name":"arterial occlusion","termid":"MONDO:0020673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral artery occlusion","secondary_identifiers":["MEDGEN:539080","ICD9:433.21","UMLS:C0265104","SCTID:195182007","DOID:11299","ICD10CM:I65.0","ICD9:433.2","ICD9:433.20"],"synonyms":[{"name":"occlusion and stenosis of vertebral artery","type":"exact"},{"name":"vertebral artery occlusion","type":"exact"},{"name":"vertebrobasial artery occlusion","type":"related"}],"termid":"MONDO:0001258","xrefs":{"Monarch":{"xref_id":"0001258"}}}


id: PBO:0091029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp20","termid":"PBO:0091029"}


id: SO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, because the number of nucleotides inserted or deleted is not a multiple of three.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_altering_variant","termid":"SO:0001818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","loinc:LA6694-9"],"synonyms":[{"name":"ANNOVAR:frameshift block substitution","type":"related"},{"name":"ANNOVAR:frameshift substitution","type":"related"},{"name":"Jannovar:frameshift_variant","type":"exact"},{"name":"Seattleseq:frameshift","type":"exact"},{"name":"Seattleseq:frameshift-near-splice","type":"related"},{"name":"VAAST:frameshift_variant","type":"exact"},{"name":"VAT:deletionFS","type":"narrow"},{"name":"VAT:insertionFS","type":"narrow"},{"name":"VEP:frameshift_variant","type":"exact"},{"name":"frameshift variant","type":"exact"},{"name":"frameshift_","type":"exact"},{"name":"frameshift_coding","type":"exact"},{"name":"snpEff:FRAME_SHIFT","type":"exact"}],"termid":"SO:0001589"}


id: PBO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs120 (predicted)","termid":"PBO:0001942"}


id: PBO:0005589
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates genes involved in nitrogen metabolism","termid":"PBO:0005589"}


id: FYPO:0002294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, but does not go on to form a viable dividing cell, and instead lyses.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vegetative cell lysis","termid":"FYPO:0000647"},{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination with elongated germ tube and cell lysis","synonyms":[{"name":"inviable after spore germination with elongated cell and cell lysis","type":"exact"},{"name":"inviable after spore germination, without cell division, with elongated germ tube and cell lysis","type":"exact"},{"name":"inviable germinated spore with elongated germ tube and cell lysis","type":"exact"},{"name":"lethal after spore germination with elongated germ tube and cell lysis","type":"exact"},{"name":"lysed cell after spore germination with elongated germ tube","type":"exact"}],"termid":"FYPO:0002294"}


id: MONDO:0012145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the FBLN5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular degeneration, age-related, 3","secondary_identifiers":["MEDGEN:373276","OMIM:608895","MESH:C563838","UMLS:C1837187"],"synonyms":[{"name":"ARMD3","type":"related"},{"name":"FBLN5 age-related macular degeneration","type":"exact"},{"name":"HNARMD","type":"related"},{"name":"age-related macular degeneration caused by mutation in FBLN5","type":"exact"},{"name":"macular Degeneration, age-related, type 3","type":"exact"},{"name":"macular degeneration, age-related, 3","type":"exact"},{"name":"neuropathy, hereditary, with or without age-related macular Degeneration","type":"related"},{"name":"neuropathy, hereditary, with or without age-related macular degeneration","type":"related"}],"termid":"MONDO:0012145","xrefs":{"Monarch":{"xref_id":"0012145"}}}


id: PBO:0078242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 22-1 (pseudogene)","termid":"PBO:0078242"}


id: PBO:0090311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cul8-RING ubiquitin ligase complex WD repeat protein subunit Mms1","termid":"PBO:0090311"}


id: GO:0031241
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the outer membrane that faces the periplasm of the cell.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"periplasmic side of cell outer membrane","synonyms":[{"name":"internal leaflet of cell outer membrane","type":"exact"},{"name":"internal side of cell outer membrane","type":"exact"},{"name":"internal side of outer membrane","type":"exact"}],"termid":"GO:0031241"}


