# terms

id: PBO:0077661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10b","termid":"PBO:0077661"}


id: PBO:0004655
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei4-Dependent Expression","termid":"PBO:0004655"}


id: PBO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14-N (predicted)","termid":"PBO:0002165"}


id: GO:0042761
data:
  {"annotated_genes":["SJAG_01458","SJAG_01300","SJAG_02885","SJAG_01356","SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88715,91145,102650,105047,110465],"is_not":false,"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:7744868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty acid metabolic process","termid":"GO:0000038"},{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"very long-chain fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5080"],"synonyms":[{"name":"very-long-chain fatty acid anabolism","type":"exact"},{"name":"very-long-chain fatty acid biosynthesis","type":"exact"},{"name":"very-long-chain fatty acid biosynthetic process","type":"exact"},{"name":"very-long-chain fatty acid formation","type":"exact"},{"name":"very-long-chain fatty acid synthesis","type":"exact"}],"termid":"GO:0042761","terms_by_termid":{"GO:0042761":null}}


id: PBO:0078092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 9","termid":"PBO:0078092"}


id: PBO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPM2A divergent transcript","termid":"PBO:0046438"}


id: PBO:0086826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL165W is not an essential gene","termid":"PBO:0086826"}


id: GO:0120517
data:
  {"annotated_genes":["SJAG_01148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035299"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol pentakisphosphate + ATP = inositol hexakisphosphate + ADP + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"inositol pentakisphosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120517","terms_by_termid":{"GO:0035299":null}}


id: PBO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_(obsolete_condition)","termid":"PBO:0034423"}


id: PBO:0090397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Vps4","termid":"PBO:0090397"}


id: GO:0018926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanesulfonic acid, a strong acid produced by the oxidation of dimethyl sulfide.","definition_xrefs":["UM-BBD_pathwayID:msa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methanesulfonic acid metabolic process","synonyms":[{"name":"methanesulfonic acid metabolism","type":"exact"},{"name":"methanesulphonic acid metabolic process","type":"exact"},{"name":"methanesulphonic acid metabolism","type":"exact"}],"termid":"GO:0018926"}


id: PBO:0031409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell","termid":"PBO:0031409"}


id: MONDO:0009432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypopituitarism, congenital, with central diabetes insipidus","secondary_identifiers":["OMIM:241540","MESH:C565477","MEDGEN:340970","UMLS:C1855800"],"synonyms":[{"name":"hypopituitarism, congenital, with central diabetes insipidus","type":"exact"}],"termid":"MONDO:0009432","xrefs":{"Monarch":{"xref_id":"0009432"}}}


id: PBO:0068513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 104, pseudogene","termid":"PBO:0068513"}


id: PBO:0061187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Ser (TGA) 2-1","termid":"PBO:0061187"}


id: MONDO:0012580
data:
  {"annotated_genes":["SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014206"}]},"cv_name":"mondo","definition":"Congenital pulmonary alveolar proteinosis is a very rare primary interstitial lung disease due to pulmonary surfactant accumulation within the alveolar macrophages and alveoli, characterized by a variable clinical course ranging from an asymptomatic clinical presentation and spontaneous remission, to symptoms such as dyspnea and cough, or to severe respiratory failure.","definition_xrefs":["Orphanet:264675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary alveolar proteinosis","termid":"MONDO:0001437"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01159":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary pulmonary alveolar proteinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200746","MEDGEN:777976","NANDO:1200750","NANDO:2200200","UMLS:C3711368","GARD:4582","MESH:C535832","OMIMPS:265120","SCTID:707442002"],"synonyms":[{"name":"congenital PAP","type":"exact"},{"name":"congenital pulmonary alveolar proteinosis","type":"exact"},{"name":"hereditary pulmonary alveolar proteinosis","type":"exact"},{"name":"inborn error of pulmonary surfactant metabolism","type":"exact"},{"name":"inborn error of surfactant metabolism","type":"exact"},{"name":"pulmonary alveolar proteinosis, congenital","type":"related"},{"name":"sufactant metabolism dysfunction, pulmonary","type":"related"}],"termid":"MONDO:0012580","terms_by_termid":{"MONDO:0014206":null},"xrefs":{"Monarch":{"xref_id":"0012580"}}}


id: MONDO:0017100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neutropenia-monocytopenia-deafness syndrome is characterized by neutropenia with myeloid marrow hypoplasia, monocytopenia, and congenital deafness. It has been described in three siblings who suffered recurrent bacterial infections.","definition_xrefs":["Orphanet:2690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neutropenia-monocytopenia-deafness syndrome","secondary_identifiers":["GARD:3982","MEDGEN:1383523","UMLS:C4518430"],"termid":"MONDO:0017100","xrefs":{"Monarch":{"xref_id":"0017100"}}}


id: PBO:0051172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-60 (pseudogene)","termid":"PBO:0051172"}


id: PBO:0065458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 4 pseudogene 1","termid":"PBO:0065458"}


id: GO:0009764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is phosphoenolpyruvate carboxykinase (PEPCK).","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"PEP carboxykinase C4 photosynthesis","termid":"GO:0009764"}


id: GO:0008494
data:
  {"annotated_genes":["SJAG_05000","SJAG_03550","SJAG_02043","SJAG_01517","SJAG_01249","SJAG_04959"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87782,97905,98648,99647,101098,111805],"is_not":false,"summary":null,"term":"GO:0008494"}]},"cv_name":"molecular_function","definition":"Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulator activity, nucleic acid binding","termid":"GO:0090079"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01249":null,"SJAG_01517":null,"SJAG_02043":null,"SJAG_03550":null,"SJAG_04959":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0045182"],"is_obsolete":false,"name":"translation activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008494","terms_by_termid":{"GO:0008494":null}}


id: FYPO:0005947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing potassium chloride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on potassium chloride","synonyms":[{"name":"normal cell population growth in presence of potassium chloride","type":"exact"},{"name":"normal cell population growth on KCl","type":"exact"},{"name":"normal cell population growth on potassium chloride","type":"exact"},{"name":"normal cellular response to potassium chloride","type":"related"},{"name":"normal vegetative cell population growth on potassium chloride","type":"exact"}],"termid":"FYPO:0005947"}


id: FYPO:0004929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which  the nucleus is broken into multiple small fragments, smaller than a normal nucleus, during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:20410137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"fragmented nucleus during meiotic cell cycle","synonyms":[{"name":"fragmented DNA during meiotic cell cycle","type":"related"},{"name":"loss of nuclear integrity during meiotic cell cycle","type":"related"},{"name":"nuclear fragmentation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004929"}


id: GO:1901933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bicyclogermacrene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"bicyclogermacrene metabolic process","termid":"GO:1901932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"bicyclogermacrene catabolic process","synonyms":[{"name":"bicyclogermacrene breakdown","type":"exact"},{"name":"bicyclogermacrene catabolism","type":"exact"},{"name":"bicyclogermacrene degradation","type":"exact"}],"termid":"GO:1901933"}


id: MONDO:0009589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesomelic dwarfism-cleft palate-camptodactyly syndrome is characterized by mesomelic shortening and bowing of the limbs, camptodactyly, skin dimpling and cleft palate with retrognathia and mandibular hypoplasia. It has been described in a brother and sister born to consanguineous parents. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesomelic dwarfism-cleft palate-camptodactyly syndrome","secondary_identifiers":["OMIM:249710","SCTID:715471007","GARD:3552","MESH:C565404","MEDGEN:340833","UMLS:C1855273"],"synonyms":[{"name":"Reardon-Hall-Slaney syndrome","type":"exact"},{"name":"mesomelic dwarfism cleft palate camptodactyly","type":"related"},{"name":"mesomelic dysplasia, Kozlowski-Reardon type","type":"exact"},{"name":"mesomelic dysplasia, Reardon type","type":"exact"},{"name":"mesomelic limb shortening and bowing","type":"related"}],"termid":"MONDO:0009589","xrefs":{"Monarch":{"xref_id":"0009589"}}}


id: PBO:0082874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Covalently-bound cell wall protein of unknown function; identified as a cell cycle regulated SBF target gene; deletion mutants are highly resistant to treatment with beta-1,3-glucanase; has sequence similarity to YJL171C","termid":"PBO:0082874"}


id: SO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified phenylalanine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_phenylalanine","secondary_identifiers":["MOD:00914"],"synonyms":[{"name":"ModPhe","type":"exact"},{"name":"modified L phenylalanine","type":"exact"},{"name":"modified L-phenylalanine","type":"exact"}],"termid":"SO:0001397"}


id: PBO:0034757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex alpha subunit Alp3","termid":"PBO:0034757"}


id: GO:1901444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to furfural.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to furfural","termid":"GO:1901442"},{"relation_name":"positively_regulates","term_name":"response to furfural","termid":"GO:1901426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to furfural","synonyms":[{"name":"activation of response to furfural","type":"narrow"},{"name":"up regulation of response to furfural","type":"exact"},{"name":"up-regulation of response to furfural","type":"exact"},{"name":"upregulation of response to furfural","type":"exact"}],"termid":"GO:1901444"}


id: MONDO:0029142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 111","secondary_identifiers":["GARD:22659","OMIM:618145","UMLS:C4748374","MEDGEN:1648423","DOID:0111640"],"synonyms":[{"name":"DFNB111","type":"narrow"},{"name":"deafness, autosomal recessive 111","type":"narrow"}],"termid":"MONDO:0029142","xrefs":{"Monarch":{"xref_id":"0029142"}}}


id: GO:0050227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxypteridine + O2 = 2-amino-4,7-dihydroxypteridine + unknown.","definition_xrefs":["EC:1.17.3.1","MetaCyc:PTERIDINE-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pteridine oxidase activity","secondary_identifiers":["RHEA:12777"],"synonyms":[{"name":"2-amino-4-hydroxypteridine:oxygen oxidoreductase (7-hydroxylating)","type":"related"}],"termid":"GO:0050227"}


id: GO:1905701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xenobiotic transmembrane export. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GO_REF:0000058","PMID:15198509","GOC:TermGenie","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1905699"},{"relation_name":"positively_regulates","term_name":"xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1990961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","synonyms":[{"name":"activation of drug transmembrane export","type":"narrow"},{"name":"positive regulation of drug transmembrane export","type":"narrow"},{"name":"positive regulation of xenobiotic transmembrane export","type":"narrow"},{"name":"up regulation of drug transmembrane export","type":"narrow"},{"name":"up-regulation of drug transmembrane export","type":"narrow"},{"name":"upregulation of drug transmembrane export","type":"narrow"}],"termid":"GO:1905701"}


id: SO:0002129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial transfer RNA.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_tRNA","synonyms":[{"name":"Mt_tRNA","type":"exact"},{"name":"mitochondrial_tRNA","type":"exact"}],"termid":"SO:0002129"}


id: PBO:0071920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 5","termid":"PBO:0071920"}


id: PBO:0078610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64","termid":"PBO:0078610"}


id: PBO:0076270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntabulin","termid":"PBO:0076270"}


id: GO:0044463
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cell projection, a prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell projection part (obsolete GO:0044463)","termid":"GO:0044463"}


id: PATO:0001447
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's being encrusted or impregnated with calcium carbonate (CHEBI:3311).","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcified","synonyms":[{"name":"calcareous","type":"exact"},{"name":"calcification","type":"narrow"}],"termid":"PATO:0001447"}


id: PBO:0004303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc1 (predicted)","termid":"PBO:0004303"}


id: PR:O13997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein IMPACT that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16301:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein IMPACT homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.02","secondary_identifiers":["UniProtKB:O13997"],"synonyms":[{"name":"SPAC27E2.02","type":"related"},{"name":"Spom972h-IMPACT","type":"exact"}],"termid":"PR:O13997"}


id: GO:0141125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: queuosine34 in tRNA + UDP-alpha-D-galactose = H+ + O-5''-beta-D-galactosylqueuosine34 in tRNATyr + UDP. Substrates include tRNA(Tyr) and tRNA(Asp).","definition_xrefs":["PMID:37992713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0140098","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"tRNA-queuosine(34) galactosyltransferase activity","secondary_identifiers":["RHEA:78231"],"synonyms":[{"name":"tRNA queuosine galactosyltransferase activity","type":"broad"},{"name":"tRNA queuosine(34) galactosyltransferase activity","type":"exact"}],"termid":"GO:0141125"}


id: MONDO:0008045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy-progressive myoclonic epilepsy syndrome is characterized by hereditary myoclonus and progressive distal muscular atrophy. Less than 10 cases have been reported. Treatment with clonazepam results in complete and lasting improvement of the myoclonus.","definition_xrefs":["Orphanet:2590"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"variable age onset epilepsy","termid":"MONDO:0100036"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"ASAH1-related sphingolipidosis","termid":"MONDO:0100524"},{"relation_name":"is_a","term_name":"ASAH1-related disorders","termid":"MONDO:0800460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002525","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"spinal muscular atrophy-progressive myoclonic epilepsy syndrome","secondary_identifiers":["GARD:3875","MESH:C537563","DOID:0111527","OMIM:159950","SCTID:703524005","MEDGEN:371854","ICD9:345.10","UMLS:C1834569"],"synonyms":[{"name":"Jankovic Rivera syndrome","type":"related"},{"name":"Jankovic-Rivera syndrome","type":"exact"},{"name":"SMAPME","type":"related"},{"name":"hereditary myoclonus and progressive distal muscular atrophy","type":"related"},{"name":"hereditary myoclonus-progressive distal muscular atrophy syndrome","type":"exact"},{"name":"myoclonus hereditary progressive distal muscular atrophy","type":"related"},{"name":"myoclonus, hereditary, with progressive distal muscular atrophy","type":"related"},{"name":"spinal muscular atrophy with progressive myoclonic epilepsy","type":"related"}],"termid":"MONDO:0008045","xrefs":{"Monarch":{"xref_id":"0008045"}}}


id: GO:2000293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of defecation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of defecation","termid":"GO:2000292"},{"relation_name":"negatively_regulates","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of defecation","termid":"GO:2000293"}


id: GO:0009167
data:
  {"annotated_genes":["SJAG_02364","SJAG_01814","SJAG_00964","SJAG_02850","SJAG_01081","SJAG_01070","SJAG_06634","SJAG_03355","SJAG_01298","SJAG_00044","SJAG_04681","SJAG_04123","SJAG_04634","SJAG_02038","SJAG_04849","SJAG_01859","SJAG_01661","SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102597,88089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[98765,96998,116484,109507,113639,102598,109396,118104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[97322,100997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046033"},{"annotations":[115973,92733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[100378,107423,59180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[101420,63871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046037"},{"annotations":[92949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[118105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[88092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046040"},{"annotations":[92951,100998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[92953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04849":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009167","terms_by_termid":{"GO:0006177":null,"GO:0006188":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null,"GO:0046033":null,"GO:0046037":null,"GO:0046040":null}}


id: GO:0032202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a telomere at a non-telomeric double-stranded DNA end. A telomere is a terminal region of a linear chromosome that includes telomeric DNA repeats and associated proteins.","definition_xrefs":["GOC:ns","PMID:8622671","GOC:mah","PMID:11902675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"telomere organization","termid":"GO:0032200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0044085","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"telomere assembly","synonyms":[{"name":"telomere formation","type":"exact"}],"termid":"GO:0032202"}


id: PBO:0048295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase pseudogene 2","termid":"PBO:0048295"}


id: PBO:0050329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 31","termid":"PBO:0050329"}


id: GO:0018622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorophenylacetate + NADH + O2 = 3,4-dihydroxyphenylacetate + chloride + NAD+.","definition_xrefs":["RHEA:14689","EC:1.14.12.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-chlorophenylacetate 3,4-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0308","KEGG_REACTION:R03306","MetaCyc:1.14.12.9-RXN"],"synonyms":[{"name":"4-chlorophenylacetate,NADH:oxygen oxidoreductase (3,4-hydroxylating, dechlorinating)","type":"related"}],"termid":"GO:0018622"}


id: FYPO:0006348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mechlorethamine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on mechlorethamine","synonyms":[{"name":"normal cell population growth in presence of mechlorethamine","type":"exact"},{"name":"normal cell population growth on mechlorethamine","type":"exact"},{"name":"normal growth on 2-chloro-N-(2-chloroethyl)-N-methylethanamine","type":"exact"},{"name":"normal growth on HN2","type":"exact"},{"name":"normal growth on bis(2-chloroethyl)methylamine","type":"exact"},{"name":"normal vegetative cell population growth on mechlorethamine","type":"exact"}],"termid":"FYPO:0006348"}


id: PBO:0072121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 10","termid":"PBO:0072121"}


id: MONDO:0054866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sudden arrhythmia death syndrome","secondary_identifiers":["MEDGEN:439428","SCTID:735686002","UMLS:C2721586"],"synonyms":[{"name":"SADS","type":"related"},{"name":"sudden arrhythmic death syndrome","type":"exact"},{"name":"sudden cardiac death due to cardiac arrhythmia","type":"related"}],"termid":"MONDO:0054866","xrefs":{"Monarch":{"xref_id":"0054866"}}}


id: GO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"positively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070760"}


id: PBO:0081486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 382","termid":"PBO:0081486"}


id: PBO:0080542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 1","termid":"PBO:0080542"}


id: PR:Q10065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trk2 gene.","definition_xrefs":["UniProtKB:Q10065","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium transport protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1639.02c","synonyms":[{"name":"Spom972h-trk2","type":"exact"}],"termid":"PR:Q10065"}


id: GO:0018811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohex-1-ene-1-carboxyl-CoA + H2O = 2-hydroxycyclohexane-1-carboxyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0191","MetaCyc:R266-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"cyclohex-1-ene-1-carboxyl-CoA hydratase activity","termid":"GO:0018811"}


id: PBO:0038675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 2A","termid":"PBO:0038675"}


id: MOD:00072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-methylglycine.","definition_xrefs":["PubMed:1593629","ChEBI:15611","DeltaMass:0","RESID:AA0063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"},{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylglycine","synonyms":[{"name":"L-sarcosine","type":"exact"},{"name":"MOD_RES N-methylglycine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methylated glycine","type":"exact"},{"name":"N-methylglycine","type":"exact"},{"name":"NMe1Gly","type":"exact"},{"name":"Sar","type":"exact"},{"name":"Sarcosine","type":"exact"},{"name":"Sarcosyl","type":"exact"},{"name":"methylaminoacetic acid","type":"exact"},{"name":"methylaminoethanoic acid","type":"exact"}],"termid":"MOD:00072"}


id: PBO:0079600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2E3 divergent transcript","termid":"PBO:0079600"}


id: PBO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 4","termid":"PBO:0052531"}


id: GO:1901250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lung goblet cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lung goblet cell differentiation","termid":"GO:1901249"},{"relation_name":"negatively_regulates","term_name":"lung goblet cell differentiation","termid":"GO:0060480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung goblet cell differentiation","synonyms":[{"name":"down regulation of lung goblet cell differentiation","type":"exact"},{"name":"down regulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"down-regulation of lung goblet cell differentiation","type":"exact"},{"name":"down-regulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"downregulation of lung goblet cell differentiation","type":"exact"},{"name":"downregulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"inhibition of lung goblet cell differentiation","type":"narrow"},{"name":"inhibition of pulmonary goblet cell differentiation","type":"narrow"},{"name":"negative regulation of pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:1901250"}


id: PBO:0085850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the membrane of the vacuole; mutant has enhanced sensitivity to overexpression of mutant huntingtin; YMR160W is not an essential gene; relative distribution within the vacuolar membrane changes upon DNA replication stress","termid":"PBO:0085850"}


id: PBO:0059568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1L, pseudogene","termid":"PBO:0059568"}


id: PBO:0076254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2C","termid":"PBO:0076254"}


id: PBO:0065947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD9 checkpoint clamp component A","termid":"PBO:0065947"}


id: PBO:0029830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_vegetative_cell_population_(obsolete_FYPO:0002407)","termid":"PBO:0029830"}


id: PBO:0012853
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWo Spored","termid":"PBO:0012853"}


id: PBO:0042066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 136","termid":"PBO:0042066"}


id: GO:0016217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deethylsimazine + H2O = N-ethylammeline + chloride + H+.","definition_xrefs":["MetaCyc:R465-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"N-ethylammeline chlorohydrolase activity","termid":"GO:0016217"}


id: GO:0016353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamate susceptibility/resistance (obsolete GO:0016353)","synonyms":[{"name":"carbamate susceptibility/resistance","type":"exact"}],"termid":"GO:0016353"}


id: PBO:0077281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 19","termid":"PBO:0077281"}


id: PBO:0087043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L20A; homologous to mammalian ribosomal protein L18A, no bacterial homolog; RPL20A has a paralog, RPL20B, that arose from the whole genome duplication","termid":"PBO:0087043"}


id: PBO:0088321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor subunit Rrn6","termid":"PBO:0088321"}


id: GO:1903627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of dUTP diphosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:1315924","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dUTP diphosphatase activity (obsolete GO:1903627)","synonyms":[{"name":"regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"regulation of dUTPase activity","type":"exact"},{"name":"regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"}],"termid":"GO:1903627"}


id: GO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex (obsolete GO:0030087)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"exact"}],"termid":"GO:0030087"}


id: PBO:0039620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A3","termid":"PBO:0039620"}


id: PR:000049982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Thr-412 and Ser-423 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Thr-412/Ser-423, MOD:00046.","definition_xrefs":["PRO:CNA","PMID:21561865","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rad9/Phos(T412,S423)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA repair protein rad9 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"rad9/Phos(T412,S423)","type":"exact"}],"termid":"PR:000049982"}


id: SO:0001798
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The inner inverted repeat region of a modular centromere and part of the central core surrounding a non-conserved central region. This region is adjacent to the central core, on each chromosome arm.","definition_xrefs":["SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric_repeat","termid":"SO:0001797"},{"relation_name":"part_of","term_name":"regional_centromere","termid":"SO:0001795"},{"relation_name":"part_of","term_name":"regional_centromere_central_core","termid":"SO:0001796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere_inner_repeat_region","synonyms":[{"name":"lmr repeat","type":"exact"},{"name":"lmr1L","type":"exact"},{"name":"lmr1R","type":"exact"},{"name":"regional centromere inner repeat region","type":"exact"}],"termid":"SO:0001798"}


id: PBO:0061581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal Xaa-Pro-Lys N-methyltransferase 2","termid":"PBO:0061581"}


id: PBO:0068497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 82, pseudogene","termid":"PBO:0068497"}


id: FYPO:0002930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal poly(A) tail length","termid":"FYPO:0002929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002929"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002929"],"is_obsolete":false,"name":"decreased poly(A) tail length","synonyms":[{"name":"decreased polyA sequence length","type":"exact"},{"name":"decreased polyA tail length","type":"exact"},{"name":"reduced poly(A) tail length","type":"exact"},{"name":"short poly(a) tails","type":"exact"}],"termid":"FYPO:0002930"}


id: MONDO:0700180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bronchioloalveolar lung carcinoma that occurs in a cat.","definition_xrefs":["NCIT:C134559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline bronchioloalveolar lung carcinoma","termid":"MONDO:0700180","xrefs":{"Monarch":{"xref_id":"0700180"}}}


id: GO:0036170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to deprivation of nourishment.","definition_xrefs":["GOC:di","PMID:17554048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"},{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:0036170"}


id: PBO:0043848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Z","termid":"PBO:0043848"}


id: PBO:0050056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, W (pseudogene)","termid":"PBO:0050056"}


id: PBO:0052510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 24","termid":"PBO:0052510"}


id: PBO:0064950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 1","termid":"PBO:0064950"}


id: PR:Q9URX3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-cysteine desulfhydrase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02270","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.03","secondary_identifiers":["UniProtKB:Q9URX3"],"synonyms":[{"name":"ACC deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ACCD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dcyD","type":"exact"}],"termid":"PR:Q9URX3"}


id: GO:1904451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrogen:potassium-exchanging ATPase activity.","definition_xrefs":["GOC:TermGenie","PMID:11897793","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of potassium:proton exchanging ATPase activity","synonyms":[{"name":"regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"regulation of H+-K+-ATPase activity","type":"exact"},{"name":"regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"regulation of H+/K+-ATPase activity","type":"exact"},{"name":"regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"regulation of H,K-ATPase activity","type":"exact"},{"name":"regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"regulation of proton pump activity","type":"broad"}],"termid":"GO:1904451"}


id: MONDO:0025085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the liver in animals due to viral infection.","definition_xrefs":["MESH:D006524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis, non-human animal","termid":"MONDO:0024945"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis, viral, animal","termid":"MONDO:0025085","xrefs":{"Monarch":{"xref_id":"0025085"}}}


id: PBO:0001870
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU family","termid":"PBO:0001870"}


id: PR:Q09330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export protein mlo3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.04","secondary_identifiers":["UniProtKB:Q09330"],"synonyms":[{"name":"RNA-annealing protein mlo3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1D7.04","type":"related"},{"name":"Spom972h-ALYREF","type":"exact"}],"termid":"PR:Q09330"}


id: MONDO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system germinoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germinoma","termid":"MONDO:0002999"},{"relation_name":"is_a","term_name":"adult central nervous system germ cell tumor","termid":"MONDO:0003405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult central nervous system germinoma","secondary_identifiers":["NCIT:C5792","DOID:7867","MEDGEN:234581","UMLS:C1370504"],"synonyms":[{"name":"adult CNS germinoma","type":"exact"},{"name":"adult central nervous system germinoma","type":"exact"},{"name":"central nervous system germinoma","type":"broad"},{"name":"central nervous system germinoma of adults","type":"exact"},{"name":"germinoma of adult CNS","type":"exact"},{"name":"germinoma of adult central nervous system","type":"exact"},{"name":"germinoma of the adult CNS","type":"exact"},{"name":"germinoma of the adult central nervous system","type":"exact"}],"termid":"MONDO:0004383","xrefs":{"Monarch":{"xref_id":"0004383"}}}


id: PBO:0036460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase, human carnosine N-methyltransferase ortholog","termid":"PBO:0036460"}


id: FYECO:0000369
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which beta-glucanase was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ beta-glucanase","termid":"FYECO:0000369"}


id: FYPO:0000156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromatin silencing at silent mating-type cassette","synonyms":[{"name":"abnormal chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"abnormal chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0000156"}


id: PBO:0108559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator Swi5","termid":"PBO:0108559"}


id: PBO:0065547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 1","termid":"PBO:0065547"}


id: PBO:0027592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0027592"}


id: PR:O14138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25A8.03c gene.","definition_xrefs":["UniProtKB:O14138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.03c","synonyms":[{"name":"Spom972h-SPAC25A8.03c","type":"exact"},{"name":"protein midA homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14138"}


id: PBO:0028680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_mating-type_region_heterochromatin","termid":"PBO:0028680"}


id: PR:G2TRN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB15E9.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein PB15E9.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.06","synonyms":[{"name":"Spom972h-SPAPB15E9.06","type":"exact"}],"termid":"PR:G2TRN3"}


id: PBO:0081912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 879","termid":"PBO:0081912"}


id: PBO:0090478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Enp2","termid":"PBO:0090478"}


id: GO:0050592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (Z)-(4-hydroxyphenyl)acetaldehyde oxime + H+ + NADPH + O2 = (S)-4-hydroxymandelonitrile + 2 H2O + NADP+.","definition_xrefs":["RHEA:18401","EC:1.14.14.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxyphenylacetaldehyde oxime monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05728","MetaCyc:1.14.13.68-RXN"],"synonyms":[{"name":"(Z)-4-hydroxyphenylacetaldehyde oxime,NADPH:oxygen oxidoreductase activity","type":"related"},{"name":"4-hydroxybenzeneacetaldehyde oxime monooxygenase activity","type":"related"},{"name":"4-hydroxyphenylacetaldehyde oxime,NADPH:oxygen oxidoreductase activity","type":"related"},{"name":"CYP71E1 activity","type":"narrow"},{"name":"NADPH-cytochrome P450 reductase (CYP71E1)","type":"related"},{"name":"cytochrome P450-II-dependent monooxygenase activity","type":"narrow"},{"name":"cytochrome P450II-dependent monooxygenase activity","type":"related"}],"termid":"GO:0050592"}


id: PBO:0045366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 2","termid":"PBO:0045366"}


id: MONDO:0012254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia, with miniepiphyses is a rare primary bone dysplasia disorder characterized by strikingly small secondary ossification centers (mini-epiphyses) in all or only some joints, resulting in severe bone dysplasia of the proximal femoral heads. Short stature, increased lumbar lordosis, genua vara and generalized joint laxity have also been reported.","definition_xrefs":["Orphanet:166032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia, with miniepiphyses","secondary_identifiers":["MESH:C563735","OMIM:609325","UMLS:C1836307","GARD:17016","ICD10CM:Q77.3","MEDGEN:332176"],"synonyms":[{"name":"epiphyseal dysplasia, multiple, with miniepiphyses","type":"related"}],"termid":"MONDO:0012254","xrefs":{"Monarch":{"xref_id":"0012254"}}}


id: GO:1903299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hexokinase activity.","definition_xrefs":["GOC:mr","GO_REF:0000059","GOC:TermGenie","PMID:15804508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hexokinase activity","synonyms":[{"name":"regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"regulation of hexokinase D","type":"related"},{"name":"regulation of hexokinase type I activity","type":"narrow"},{"name":"regulation of hexokinase type II activity","type":"narrow"},{"name":"regulation of hexokinase type III activity","type":"narrow"},{"name":"regulation of hexokinase type IV","type":"related"},{"name":"regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"regulation of hexokinase type IV glucokinase activity","type":"exact"}],"termid":"GO:1903299"}


id: PBO:0070545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 11","termid":"PBO:0070545"}


id: GO:0033091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation","termid":"GO:0033083"},{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"positively_regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of immature T cell proliferation","termid":"GO:0033091"}


id: MONDO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An episode of depression lasting two or more weeks without an intervening episode of mania.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"depressive disorder","termid":"MONDO:0002050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major depressive disorder","secondary_identifiers":["ICD9:296.30","MESH:D003865","MFOMD:0000143","MEDGEN:266123","EFO:0003761","NCIT:C35094","SCTID:370143000","ICD9:296.20","UMLS:C1269683","OMIM:608516","DOID:1470","SCTID:300706003","ICD9:296.2","ICD9:296.3"],"synonyms":[{"name":"major depression","type":"exact"},{"name":"major depressive disorder","type":"exact"},{"name":"major depressive disorder 1","type":"broad"},{"name":"major depressive disorder 2","type":"broad"},{"name":"major depressive disorder and accelerated response to antidepressant drug treatment","type":"exact"},{"name":"major depressive disorder, response to citalopram therapy in","type":"exact"},{"name":"recurrent major depression","type":"exact"},{"name":"single major depressive episode","type":"exact"},{"name":"unipolar depression","type":"exact"},{"name":"unipolar depression, susceptibility to","type":"exact"}],"termid":"MONDO:0002009","xrefs":{"Monarch":{"xref_id":"0002009"}}}


id: GO:0050211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + procollagen 5-hydroxy-L-lysine = UDP + procollagen 5-(D-galactosyloxy)-L-lysine.","definition_xrefs":["EC:2.4.1.50","MetaCyc:PROCOLLAGEN-GALACTOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"procollagen galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1981128","RHEA:12637","Reactome:R-HSA-1981120"],"synonyms":[{"name":"UDP galactose-collagen galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:procollagen-5-hydroxy-L-lysine D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:5-hydroxylysine-collagen galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:procollagen-5-hydroxy-L-lysine D-galactosyltransferase activity","type":"related"},{"name":"collagen galactosyltransferase activity","type":"related"},{"name":"collagen hydroxylysyl galactosyltransferase activity","type":"related"},{"name":"hydroxylysine galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-collagen galactosyltransferase activity","type":"related"}],"termid":"GO:0050211"}


id: PBO:0079501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNL4A pseudogene 1","termid":"PBO:0079501"}


id: GO:0034050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes after interaction with a symbiont (defined as the smaller of two, or more, organisms engaged in symbiosis, a close interaction encompassing mutualism through parasitism). This can be triggered by direct interaction with the organism, for example, contact with penetrating hyphae of a fungus; or an indirect interaction such as symbiont-secreted molecules.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-induced defense-related programmed cell death","synonyms":[{"name":"host programmed cell death induced by symbiont","type":"exact"},{"name":"programmed cell death induced by symbiont","type":"exact"}],"termid":"GO:0034050"}


id: PBO:0062290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 1","termid":"PBO:0062290"}


id: FYPO:0002195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and have normal morphology (i.e. size, shape, and structure) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal morphology viable vegetative cell population (obsolete FYPO:0002195)","synonyms":[{"name":"viable vegetative cell population with normal cell morphology","type":"exact"},{"name":"viable vegetative cell population with normal cell shape and size","type":"exact"}],"termid":"FYPO:0002195"}


id: PR:P87179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wsc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity and stress response component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.01c","synonyms":[{"name":"Spom972h-wsc1","type":"exact"}],"termid":"PR:P87179"}


id: PBO:0036530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl4","termid":"PBO:0036530"}


id: GO:0005322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein (obsolete GO:0005322)","synonyms":[{"name":"LDL","type":"exact"},{"name":"low-density lipoprotein","type":"exact"}],"termid":"GO:0005322"}


id: MONDO:0016064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate is a fissure type embryopathy that affects the soft and hard palate to varying degrees.","definition_xrefs":["Orphanet:2014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate","secondary_identifiers":["NCIT:C87069","DOID:674","ICD9:749.00","MEDGEN:756015","ICD9:749.0","MESH:D002972","UMLS:C2981150","SCTID:63567004","icd11.foundation:2129534948","MedDRA:10009269"],"synonyms":[{"name":"palatoschisis","type":"exact"},{"name":"uranostaphyloschisis","type":"exact"}],"termid":"MONDO:0016064","xrefs":{"Monarch":{"xref_id":"0016064"}}}


id: MONDO:0015208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A esophageal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic esophageal malformation (obsolete MONDO:0015208)","secondary_identifiers":["Orphanet:108961"],"synonyms":[{"name":"syndrome associated with esophageal malformation","type":"exact"},{"name":"syndromic esophageal malformation","type":"exact"}],"termid":"MONDO:0015208","xrefs":{"Monarch":{"xref_id":"0015208"}}}


id: PBO:0077925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane phosphatase with tensin homology","termid":"PBO:0077925"}


id: MONDO:0014556
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84657],"is_not":false,"summary":null,"term":"MONDO:0014556"}]},"cv_name":"mondo","definition":"A rare multiple congenital anomalies/dysmorphic syndrome with intellectual disability characterized by severe congenital contractures of the limbs and face, hypotonia, neonatal respiratory distress, and global developmental delay. Dysmorphic facial features include downslanting palpebral fissures, broad nasal bridge, large nares, long philtrum, and deep nasolabial folds, among others. Limb deformities (camptodactyly, clubfoot), short neck, scoliosis, as well as seizures have also been reported. Brain MRI may show cerebral and cerebellar atrophy in some cases.","definition_xrefs":["Orphanet:562528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"is_obsolete":false,"name":"congenital contractures of the limbs and face, hypotonia, and developmental delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616266","DOID:0081048","UMLS:C4225398","MEDGEN:907234","EFO:1001868","GARD:16075"],"synonyms":[{"name":"CLIFAHDD","type":"related"},{"name":"CLIFAHDD syndrome","type":"exact"},{"name":"congenital contractures of the limbs and face, hypotonia, and developmental delay","type":"exact"},{"name":"congenital limbs-face contractures-hypotonia-developmental delay syndrome","type":"exact"}],"termid":"MONDO:0014556","terms_by_termid":{"MONDO:0014556":null},"xrefs":{"Monarch":{"xref_id":"0014556"}}}


id: GO:0019519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentitols, any alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pentitol metabolic process","synonyms":[{"name":"pentitol metabolism","type":"exact"}],"termid":"GO:0019519"}


id: GO:0006479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alkylation","termid":"GO:0008213"},{"relation_name":"is_a","term_name":"macromolecule methylation","termid":"GO:0043414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein methylation","synonyms":[{"name":"protein amino acid methylation","type":"exact"}],"termid":"GO:0006479"}


id: GO:0141223
data:
  {"annotated_genes":["SJAG_00582"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108610],"is_not":false,"summary":null,"term":"GO:0141223"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + O-succinyl-L-serine = L-cysteine + succinate.","definition_xrefs":["RHEA:53816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00582":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"cysteine synthase activity, acting on O-succinyl-L-serine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cysteine synthase activity","type":"broad"}],"termid":"GO:0141223","terms_by_termid":{"GO:0141223":null}}


id: PBO:0079413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 7","termid":"PBO:0079413"}


id: PBO:0036102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0036102"}


id: MONDO:0020494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculootodental syndrome is a contiguous gene syndrome comprising otodental syndrome (characterized by globodontia and sensorineural high-frequency hearing deficit) associated with eye abnormalities including, typically, iris and chorioretinal coloboma, as well as, on occasion, microcornea, microphtalmos, lenticular opacity, lens coloboma and iris pigment epithelial atrophy.","definition_xrefs":["Orphanet:99806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 11","termid":"MONDO:0016910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculootodental syndrome","secondary_identifiers":["GARD:16910","MEDGEN:413814","UMLS:C2750325"],"synonyms":[{"name":"OOD","type":"exact"}],"termid":"MONDO:0020494","xrefs":{"Monarch":{"xref_id":"0020494"}}}


id: GO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus upon activation.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus (obsolete GO:0000189)","synonyms":[{"name":"nuclear translocation of MAPK","type":"narrow"}],"termid":"GO:0000189"}


id: PBO:0064982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progenitor renewal associated non-coding RNA","termid":"PBO:0064982"}


id: GO:0008075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate.","definition_xrefs":["EC:4.6.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor guanylate cyclase activity (obsolete GO:0008075)","synonyms":[{"name":"receptor guanylate cyclase activity","type":"exact"}],"termid":"GO:0008075"}


id: GO:0051003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ligation of two substances via a nitrogen-metal bond, forming a coordination complex.","definition_xrefs":["EC:6.6.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}


id: GO:1904506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomere maintenance in response to DNA damage.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","PMID:22579284","GO_REF:0000058","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance in response to DNA damage","termid":"GO:1904505"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomere maintenance in response to DNA damage","synonyms":[{"name":"down regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"down regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"down-regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"down-regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"downregulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"downregulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"inhibition of DNA damage response, telomere maintenance","type":"narrow"},{"name":"inhibition of telomere maintenance in response to DNA damage","type":"narrow"},{"name":"negative regulation of DNA damage response, telomere maintenance","type":"exact"}],"termid":"GO:1904506"}


id: PBO:0017709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omega-amidase (predicted)","termid":"PBO:0017709"}


id: PBO:0079948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP2 antisense RNA 1","termid":"PBO:0079948"}


id: GO:0010761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell migration that is accomplished by extension and retraction of a fibroblast pseudopodium. A fibroblast is a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast migration","synonyms":[{"name":"fibroblast cell migration","type":"exact"}],"termid":"GO:0010761"}


id: MONDO:0013388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SCN2A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 11","secondary_identifiers":["MEDGEN:462337","DOID:0080421","OMIM:613721","GARD:15699","UMLS:C3150987"],"synonyms":[{"name":"DEE11","type":"exact"},{"name":"EIEE11","type":"exact"},{"name":"SCN2A early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 11","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SCN2A","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 11","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 11","type":"exact"}],"termid":"MONDO:0013388","xrefs":{"Monarch":{"xref_id":"0013388"}}}


id: GO:0034643
data:
  {"annotated_genes":["SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101944],"is_not":false,"summary":null,"term":"GO:0034643"}]},"cv_name":"biological_process","definition":"The directed movement of the mitochondrion to a specific location, by a process involving microtubules.","definition_xrefs":["PMID:16306220","GOC:mah","PMID:12972644","PMID:15979253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of mitochondrion localization, microtubule-mediated","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of mitochondrion localisation, microtubule-mediated","type":"exact"},{"name":"microtubule-mediated mitochondrion localization","type":"exact"},{"name":"mitochondrial localization, microtubule-mediated","type":"exact"}],"termid":"GO:0034643","terms_by_termid":{"GO:0034643":null}}


id: MONDO:0060555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vertebral-cardiac-renal anomalies syndrome","termid":"MONDO:0020831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0006025"],"is_obsolete":false,"name":"vertebral, cardiac, renal, and limb defects syndrome 2","secondary_identifiers":["MEDGEN:1624065","GARD:18509","OMIM:617661","UMLS:C4540014"],"synonyms":[{"name":"VCRL2","type":"related"},{"name":"congenital NAD deficiency disorder 2","type":"related"},{"name":"kynureninase deficiency, complete","type":"related"},{"name":"vertebral, cardiac, renal, and limb defects syndrome 2","type":"exact"}],"termid":"MONDO:0060555","xrefs":{"Monarch":{"xref_id":"0060555"}}}


id: PBO:0065919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase subunit beta","termid":"PBO:0065919"}


id: PBO:0052919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-2","termid":"PBO:0052919"}


id: MONDO:0007025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The primary sore of syphilis, a painless indurated, eroded papule, occurring at the site of entry of the infection.","definition_xrefs":["EFO:1001247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chancre","secondary_identifiers":["UMLS:C0600049","MEDGEN:671172","MESH:D002601"],"termid":"MONDO:0007025","xrefs":{"Monarch":{"xref_id":"0007025"}}}


id: PBO:0077234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMCC1 divergent transcript","termid":"PBO:0077234"}


id: PBO:0080423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 7","termid":"PBO:0080423"}


id: PBO:0015271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNUTS homologue, mRNA cleavage and polyadenylation specificity factor complex associated protein","termid":"PBO:0015271"}


id: PBO:0070319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 8","termid":"PBO:0070319"}


id: PBO:0051004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 1","termid":"PBO:0051004"}


id: MONDO:0003492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal gland carcinoma","termid":"MONDO:0002463"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"lacrimal gland squamous cell carcinoma","secondary_identifiers":["DOID:5529","UMLS:C1334360","MEDGEN:233607","NCIT:C6092"],"synonyms":[{"name":"epidermoid carcinoma of lacrimal gland","type":"exact"},{"name":"epidermoid carcinoma of the lacrimal gland","type":"exact"},{"name":"lacrimal gland epidermoid carcinoma","type":"exact"},{"name":"lacrimal gland squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of lacrimal gland","type":"exact"},{"name":"squamous cell carcinoma of the lacrimal gland","type":"exact"}],"termid":"MONDO:0003492","xrefs":{"Monarch":{"xref_id":"0003492"}}}


id: MONDO:1010930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotubular myopathy 1 that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotubular myopathy 1, non-human animal","termid":"MONDO:1010202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubular myopathy 1, domestic cat","secondary_identifiers":["OMIA:001508-9685"],"termid":"MONDO:1010930","xrefs":{"Monarch":{"xref_id":"1010930"}}}


id: PBO:0029869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_trimethylation","termid":"PBO:0029869"}


id: GO:0043680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of cell wall invaginations in a synergid cell, similar to those in transfer cells.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"filiform apparatus","termid":"GO:0043680"}


id: FYPO:0007030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the levels and proportions of monosaccharides in the cell wall are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30389790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell wall monosaccharide composition during vegetative growth","synonyms":[{"name":"normal cell wall monosaccharide composition during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007030"}


id: GO:0005009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with insulin receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0038023","GO:0003824","GO:0016740","GO:0016301","GO:0003674","GO:0140096","GO:0004672"],"is_obsolete":false,"name":"insulin receptor activity","secondary_identifiers":["Reactome:R-HSA-74715"],"synonyms":[{"name":"insulin-activated receptor activity","type":"exact"}],"termid":"GO:0005009"}


id: MONDO:0013540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deafness - lymphedema - leukemia is a very rare, serious syndromic genetic disorder characterized by primary lymphedema, immunodeficiency, and hematological disorders.","definition_xrefs":["Orphanet:3226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"},{"relation_name":"is_a","term_name":"GATA2 deficiency with susceptibility to MDS/AML","termid":"MONDO:0042982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"deafness-lymphedema-leukemia syndrome","secondary_identifiers":["UMLS:C3279664","ICD9:757.0","GARD:13030","SCTID:700057001","MEDGEN:481294","OMIM:614038"],"synonyms":[{"name":"Emberger syndrome","type":"exact"},{"name":"deafness-lymphedema-leukemia syndrome","type":"exact"},{"name":"lymphedema, primary, with myelodysplasia","type":"related"}],"termid":"MONDO:0013540","xrefs":{"Monarch":{"xref_id":"0013540"}}}


id: GO:0099074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion to the lysosome, mediated by a mitochondrion-derived vesicle.","definition_xrefs":["PMID:20619655","GOC:PARL-UCL","GOC:pad","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"mitochondrion to lysosome vesicle-mediated transport","synonyms":[{"name":"mitochondrion to lysosome transport","type":"exact"}],"termid":"GO:0099074"}


id: RO:HOM0000010
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that is detected by similarity in content and organization between chromosomes.","definition_xrefs":["MeSH:Synteny"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syntenic_homology_relationship_with","synonyms":[{"name":"syntenic homologous to","type":"exact"},{"name":"synteny","type":"related"}],"termid":"RO:HOM0000010"}


id: FYPO:0001052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis when smaller than wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis such that the septum physically divides the nucleus into two parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"has_part","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"},{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0000631","FYPO:0005447","FYPO:0000004","FYPO:0000002","FYPO:0000032","FYPO:0000005","FYPO:0001985","FYPO:0000337"],"is_obsolete":false,"name":"cut, small cell","synonyms":[{"name":"cut following advanced onset of mitosis","type":"exact"},{"name":"cut, small cell during mitotic cell cycle","type":"related"},{"name":"cut, small cell during vegetative growth","type":"exact"},{"name":"mitotic catastrophe with cut, small cell","type":"related"},{"name":"septation following abnormal nuclear division, small cell","type":"exact"},{"name":"small cut cell","type":"exact"}],"termid":"FYPO:0001052"}


id: MONDO:0006307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infrequent pituitary gland adenoma composed of an admixture of acidophilic and chromophobic cells that produce growth hormone and prolactin respectively. Unlike mammosomatotroph adenomas, these two hormones are not localized in the same cell by immunohistochemistry.","definition_xrefs":["NCIT:C45927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed somatotroph-lactotroph pituitary gland adenoma","secondary_identifiers":["UMLS:C1709052","EFO:1000383","MEDGEN:353936"],"synonyms":[{"name":"Mixed somatotroph and lactotroph adenoma","type":"exact"},{"name":"mixed GH-PRL cell adenoma","type":"exact"},{"name":"mixed Somatolactotrope adenoma","type":"exact"},{"name":"mixed somatotroph-lactotroph adenoma","type":"exact"},{"name":"mixed somatotroph-lactotroph pituitary gland adenoma","type":"exact"}],"termid":"MONDO:0006307","xrefs":{"Monarch":{"xref_id":"0006307"}}}


id: MONDO:0957271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory disease, systemic, with vasculitis","secondary_identifiers":["OMIM:620376","UMLS:C5830525","MEDGEN:1841161"],"termid":"MONDO:0957271","xrefs":{"Monarch":{"xref_id":"0957271"}}}


id: PBO:0080607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 44","termid":"PBO:0080607"}


id: PBO:0077505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 222","termid":"PBO:0077505"}


id: GO:0009705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vacuole that retains the same shape regardless of cell cycle phase. The membrane separates its contents from the cytoplasm of the cell. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["ISBN:0471245208","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar membrane","termid":"GO:0005774"},{"relation_name":"part_of","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plant-type vacuole membrane","synonyms":[{"name":"membrane of vacuole with cell cycle-independent morphology","type":"exact"},{"name":"tonoplast","type":"exact"},{"name":"vacuolar membrane","type":"broad"}],"termid":"GO:0009705"}


id: GO:0052407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving carbohydrates within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of carbohydrate in other organism involved in symbiotic interaction (obsolete GO:0052407)","synonyms":[{"name":"metabolism by organism of carbohydrate in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052407"}


id: PBO:0082965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; potential Cdc28p substrate; contains a Phox homology (PX) domain and specifically binds phosphatidylinositol 3-phosphate (PtdIns-3-P); YKR078W has a paralog, VPS5, that arose from the whole genome duplication","termid":"PBO:0082965"}


id: PR:O13686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 59 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02195","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RWD, RING finger and WD repeat-containing protein C11E3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.05","secondary_identifiers":["UniProtKB:O13686"],"synonyms":[{"name":"Spom972h-WDR59","type":"exact"}],"termid":"PR:O13686"}


id: PBO:0069792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1078, pseudogene","termid":"PBO:0069792"}


id: GO:0048152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of S100 beta protein. S100 is a small calcium and zinc binding protein produced in astrocytes that is implicated in Alzheimer's disease, Down Syndrome and ALS.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete S100 beta biosynthetic process (obsolete GO:0048152)","synonyms":[{"name":"S100 beta anabolism","type":"exact"},{"name":"S100 beta biosynthesis","type":"exact"},{"name":"S100 beta formation","type":"exact"},{"name":"S100 beta synthesis","type":"exact"}],"termid":"GO:0048152"}


id: FYPO:0004098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and most of the DNA remains in a single mass at or near the midpoint of the mitotic spindle, but portions of the chromosomes can separate along the spindle, resulting in the formation of a DNA mass shaped like the Greek letter phi.","definition_xrefs":["PMID:7957061","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"incomplete mitotic sister chromatid segregation, with phi-shaped DNA mass","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with phi-shaped DNA mass, during vegetative growth","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with phi-shaped DNA mass","type":"related"},{"name":"incomplete sister chromatid segregation, with phi-shaped DNA mass during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004098"}


id: GO:0070472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uterine smooth muscle contraction","synonyms":[{"name":"regulation of myometrial contraction","type":"exact"},{"name":"regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"regulation of myometrium contraction","type":"exact"}],"termid":"GO:0070472"}


id: MONDO:0006607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the sebaceous gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland disorder","secondary_identifiers":["UMLS:C0036502","DOID:9098","ICD9:706.1","SCTID:3441005","MESH:D012625","EFO:1000763","MEDGEN:48599"],"synonyms":[{"name":"disease of sebaceous gland","type":"exact"},{"name":"disease of sebaceous glands","type":"related"},{"name":"disease or disorder of sebaceous gland","type":"exact"},{"name":"disorder of sebaceous gland","type":"exact"},{"name":"sebaceous gland disease","type":"exact"},{"name":"sebaceous gland disease or disorder","type":"exact"}],"termid":"MONDO:0006607","xrefs":{"Monarch":{"xref_id":"0006607"}}}


id: GO:0032096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to a food stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to food","termid":"GO:0032095"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"negatively_regulates","term_name":"response to food","termid":"GO:0032094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to food","synonyms":[{"name":"down regulation of response to food","type":"exact"},{"name":"down-regulation of response to food","type":"exact"},{"name":"downregulation of response to food","type":"exact"},{"name":"inhibition of response to food","type":"narrow"}],"termid":"GO:0032096"}


id: GO:0120077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The connection of an angiogenic sprout to another vessel or sprout during the formation of vascular networks by sprouting angiogenesis.","definition_xrefs":["PMID:28264837","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiogenic sprout fusion","synonyms":[{"name":"blood vessel anastomosis","type":"exact"}],"termid":"GO:0120077"}


id: MONDO:0002659
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the choroid, ciliary body, or iris.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"uvea neoplasm","termid":"MONDO:0021225"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"uveal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3665670","EFO:1001230","MEDGEN:1772018","NCIT:C6105","DOID:3479"],"synonyms":[{"name":"cancer of uvea","type":"exact"},{"name":"malignant neoplasm of the uvea","type":"exact"},{"name":"malignant neoplasm of uvea","type":"exact"},{"name":"malignant tumor of the uvea","type":"exact"},{"name":"malignant tumor of uvea","type":"exact"},{"name":"malignant tumour of the uvea","type":"exact"},{"name":"malignant tumour of uvea","type":"exact"},{"name":"malignant uvea neoplasm","type":"exact"},{"name":"malignant uvea tumor","type":"exact"},{"name":"malignant uvea tumour","type":"exact"},{"name":"malignant uveal neoplasm","type":"exact"},{"name":"malignant uveal tumor","type":"exact"},{"name":"malignant uveal tumour","type":"exact"},{"name":"uvea cancer","type":"exact"},{"name":"uveal tumor","type":"broad"},{"name":"uveal tumour","type":"broad"}],"termid":"MONDO:0002659","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002659"}}}


id: PBO:0048203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit beta1","termid":"PBO:0048203"}


id: PBO:0079455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor candidate 8","termid":"PBO:0079455"}


id: MONDO:0011739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial pancreatic carcinoma in which the cause of the disease is a mutation in the PALLD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 1","secondary_identifiers":["OMIM:606856","MEDGEN:339739","UMLS:C1847351"],"synonyms":[{"name":"PALLD familial pancreatic carcinoma","type":"exact"},{"name":"Pnca1","type":"related"},{"name":"familial pancreatic carcinoma caused by mutation in PALLD","type":"exact"},{"name":"pancreatic cancer, susceptibility to, 1","type":"exact"},{"name":"pancreatic cancer, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to pancreatic cancer 1","type":"related"}],"termid":"MONDO:0011739","xrefs":{"Monarch":{"xref_id":"0011739"}}}


id: FYPO:0001305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of any long-chain fatty acid-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"abnormal lcfa-ligase activity","type":"exact"}],"termid":"FYPO:0001305"}


id: GO:0051641
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id: RO:0002439
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  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship involving a predation process, where the subject kills the target in order to eat it or to feed to siblings, offspring or group members","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preys_on","termid":"RO:0002439"}


id: PBO:0026954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_monoseptate_vegetative_cell","termid":"PBO:0026954"}


id: PBO:0038619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline ceramidase 1","termid":"PBO:0038619"}


id: PBO:0113015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor for glycogen; cytosolic receptor for glycogen that mediates glycophagy, the autophagy of glycogen; induced during prolonged nitrogen starvation and highly expressed during sporulation, both glycophagy-inducing conditions; expression directly regulated by Ume6p, a metabolic and meiotic transcriptional regulator; contains a glycogen-binding domain (GBD) and an Atg8 family-interacting motif (AIM) proposed to facilitate sequestration of glycogen by autophagic isolation membranes","termid":"PBO:0113015"}


id: MONDO:0700151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain or spinal cord tumor arising from glial cells that occurs in dogs.","definition_xrefs":["NCIT:C129297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine glioma","termid":"MONDO:0700151","xrefs":{"Monarch":{"xref_id":"0700151"}}}


id: PBO:0071455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 61","termid":"PBO:0071455"}


id: PBO:0085027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitrogen catabolite repression transcriptional regulator; inhibits GLN3 transcription in good nitrogen source; role in sequestering Gln3p and Gat1p to the cytoplasm; has glutathione peroxidase activity and can mutate to acquire GST activity; self-assembly under limited nitrogen conditions creates [URE3] prion and releases catabolite repression","termid":"PBO:0085027"}


id: MONDO:1010860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysosomal storage disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease, dog","secondary_identifiers":["OMIA:000616-9615"],"termid":"MONDO:1010860","xrefs":{"Monarch":{"xref_id":"1010860"}}}


id: GO:0009414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water deprivation","synonyms":[{"name":"drought tolerance","type":"related"},{"name":"response to dehydration","type":"exact"},{"name":"response to drought","type":"exact"},{"name":"response to thirst","type":"exact"}],"termid":"GO:0009414"}


id: FYPO:0005664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is viable, and becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:12399381","PMID:19366728"],"direct_ancestors":[{"relation_name":"has_part","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"has_part","term_name":"elongated cell during nitrogen starvation","termid":"FYPO:0000998"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"elongated cell during nitrogen starvation","termid":"FYPO:0000998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"viable elongated cell during nitrogen starvation","synonyms":[{"name":"cdr phenotype","type":"exact"},{"name":"viable elongated cell during nitrogen depletion","type":"exact"},{"name":"viable elongated cell during nitrogen deprivation","type":"exact"},{"name":"viable long cell during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005664"}


id: GO:1904477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of small GTPase binding.","definition_xrefs":["PMID:15798216","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of small GTPase binding","termid":"GO:1904475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of small GTPase binding","synonyms":[{"name":"activation of Ras GTPase binding","type":"narrow"},{"name":"positive regulation of Ras GTPase binding","type":"narrow"},{"name":"up regulation of small GTPase binding","type":"exact"},{"name":"up-regulation of small GTPase binding","type":"exact"},{"name":"upregulation of small GTPase binding","type":"exact"}],"termid":"GO:1904477"}


id: PBO:0074001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 2","termid":"PBO:0074001"}


id: FYPO:0006390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains more than one meiotic spindle during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0002399","FYPO:0000120"],"is_obsolete":false,"name":"multiple meiotic spindles","synonyms":[{"name":"additional meiotic spindles present","type":"exact"},{"name":"extra meiotic spindles","type":"exact"},{"name":"increased number of meiotic spindles","type":"exact"},{"name":"meiotic spindles present in greater numbers","type":"exact"},{"name":"multiple spindles during meiosis","type":"exact"}],"termid":"FYPO:0006390"}


id: GO:1900530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in cellular response to salt stress.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:9135147"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in cellular response to salt stress (obsolete GO:1900530)","synonyms":[{"name":"regulation of cell shape involved in cellular response to salt stress","type":"exact"},{"name":"regulation of cell shape of cellular response to ionic osmotic stress","type":"exact"},{"name":"regulation of cell shape of cellular response to salt stress","type":"exact"},{"name":"regulation of cell shape of cellular salinity response","type":"exact"}],"termid":"GO:1900530"}


id: GO:0009646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to absence of light","synonyms":[{"name":"response to darkness","type":"related"}],"termid":"GO:0009646"}


id: MONDO:0012182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, rhizomelic, with retinitis pigmentosa","secondary_identifiers":["MEDGEN:332318","MESH:C563806","UMLS:C1836898","OMIM:609047"],"synonyms":[{"name":"skeletal dysplasia, rhizomelic, with retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0012182","xrefs":{"Monarch":{"xref_id":"0012182"}}}


id: MONDO:1010654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycythemia, non-human animal","termid":"MONDO:1010078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycythemia, domestic cat","secondary_identifiers":["OMIA:000809-9685"],"termid":"MONDO:1010654","xrefs":{"Monarch":{"xref_id":"1010654"}}}


id: PBO:0077609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 4 X-linked","termid":"PBO:0077609"}


id: GO:0070108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"negatively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"negative regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"negative regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070108"}


id: GO:0033278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the midbrain.","definition_xrefs":["GO_REF:0000021","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in midbrain","synonyms":[{"name":"cell proliferation in mesencephalon","type":"exact"},{"name":"mesencepahalic cell proliferation","type":"related"}],"termid":"GO:0033278"}


id: PBO:0005243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatB N-acetyltransferase complex catalytic subunit Naa20 (predicted)","termid":"PBO:0005243"}


id: SO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a vault RNA.","definition_xrefs":["PMID:22926522","PMID:19491402","PMID:30773316","PMID:9535882","PMID:19298825","PMID:22058117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault_RNA_gene","termid":"SO:0002358"}


id: GO:0071616
data:
  {"annotated_genes":["SJAG_01139","SJAG_04007","SJAG_03313","SJAG_02158","SJAG_00982","SJAG_00866","SJAG_03064","SJAG_03310","SJAG_01402","SJAG_03731","SJAG_02741","SJAG_02006","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97576,92453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[115230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[116181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[86641,87066,107744,117582,113370,94200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[106632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[97556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[98226],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with an acyl group.","definition_xrefs":["GOC:cjk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"thioester biosynthetic process","termid":"GO:0035384"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02741":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03313":null,"SJAG_03731":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acyl-CoA anabolism","type":"exact"},{"name":"acyl-CoA biosynthesis","type":"exact"},{"name":"acyl-CoA formation","type":"exact"},{"name":"acyl-CoA synthesis","type":"exact"}],"termid":"GO:0071616","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0010510":null,"GO:0019427":null,"GO:0035338":null,"GO:1990181":null,"GO:2001295":null}}


id: GO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acylsphing-4-enine + H2O = a fatty acid + sphing-4-enine.","definition_xrefs":["RHEA:20856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase activity","secondary_identifiers":["Reactome:R-HSA-1606583","Reactome:R-HSA-1606602","MetaCyc:CERAMIDASE-RXN","Reactome:R-HSA-428231","Reactome:R-HSA-428205","EC:3.5.1.23"],"synonyms":[{"name":"acylsphingosine deacylase activity","type":"related"},{"name":"ceramidase activity","type":"narrow"},{"name":"glycosphingolipid ceramide deacylase","type":"broad"}],"termid":"GO:0017040"}


id: GO:0016108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tetraterpenoid metabolic process","synonyms":[{"name":"tetraterpene metabolic process","type":"narrow"},{"name":"tetraterpene metabolism","type":"narrow"},{"name":"tetraterpenoid metabolism","type":"exact"}],"termid":"GO:0016108"}


id: PBO:0075827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 2","termid":"PBO:0075827"}


id: MONDO:0010188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ataxia with vitamin E deficiency (AVED) is a neurodegenerative disease belonging to the inherited cerebellar ataxias. It is mainly characterized by progressive spino-cerebellar ataxia, loss of proprioception, areflexia, and is associated with a marked deficiency in vitamin E.","definition_xrefs":["Orphanet:96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"familial isolated deficiency of vitamin E","secondary_identifiers":["GARD:8595","NANDO:1200050","ICD9:334.3","MEDGEN:341248","DOID:0090028","MedDRA:10047631","ICD9:269.1","OMIM:277460","SCTID:702442008","UMLS:C1848533","MESH:C535393","NORD:817"],"synonyms":[{"name":"AVED","type":"exact"},{"name":"Ataxia with Vitamin E Deficiency","type":"exact"},{"name":"Friedreich-like ataxia","type":"exact"},{"name":"Friedreich-like ataxia with selective vitamin E deficiency","type":"related"},{"name":"VED","type":"related"},{"name":"ataxia with isolated vitamin E deficiency","type":"exact"},{"name":"ataxia with vitamin E deficiency","type":"related"},{"name":"ataxia, Friedreich-like, with selective vitamin E deficiency","type":"related"},{"name":"familial isolated deficiency of vitamin type E","type":"exact"},{"name":"familial isolated vitamin E deficiency","type":"exact"},{"name":"isolated vitamin E deficiency","type":"exact"},{"name":"vitamin E, familial isolated deficiency OF","type":"related"}],"termid":"MONDO:0010188","xrefs":{"Monarch":{"xref_id":"0010188"}}}


id: PR:O14287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.01","synonyms":[{"name":"Spom972h-SPAC9E9.01","type":"exact"}],"termid":"PR:O14287"}


id: PR:O13701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.02c","synonyms":[{"name":"Spom972h-ptr6","type":"exact"},{"name":"TAFII-55 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID 55 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13701"}


id: FYPO:0004666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased along the length of the chromosome arms during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion along chromosome arms","synonyms":[{"name":"abnormal sister chromatid cohesion along chromosome arms during meiosis","type":"exact"},{"name":"decreased meiotic sister chromatid cohesion, arms","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion along chromosome arms","type":"exact"}],"termid":"FYPO:0004666"}


id: PBO:0000637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Snf30","termid":"PBO:0000637"}


id: MONDO:1012081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, bighorn sheep","secondary_identifiers":["OMIA:000393-37174"],"termid":"MONDO:1012081","xrefs":{"Monarch":{"xref_id":"1012081"}}}


id: GO:1900428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth","termid":"GO:0010570"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"}


id: PBO:0042557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 20","termid":"PBO:0042557"}


id: PR:O13688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.08c","synonyms":[{"name":"Spom972h-nse6","type":"exact"},{"name":"core protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-SMC element 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13688"}


id: PATO:0000688
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's not occurring or existing at the same time or having the same period or phase.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous","termid":"PATO:0000688"}


id: PBO:0028339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_DNA_level","termid":"PBO:0028339"}


id: MONDO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant tumor that arises from the breast and originates from or is composed of myoepithelial cells. Representative examples include adenomyoepithelioma, myoepitheliosis, and malignant myoepithelioma.","definition_xrefs":["NCIT:C40389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoepithelial tumor","termid":"MONDO:0002380"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast myoepithelial tumor","secondary_identifiers":["UMLS:C1511319","MEDGEN:267411","DOID:3004"],"synonyms":[{"name":"breast myoepithelial neoplasm","type":"exact"},{"name":"breast myoepithelial tumor","type":"exact"}],"termid":"MONDO:0002483","xrefs":{"Monarch":{"xref_id":"0002483"}}}


id: FYPO:0007489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased, and the protein is present in the cytosol instead.","definition_xrefs":["PMID:32918581","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to Golgi apparatus","termid":"FYPO:0004786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol","synonyms":[{"name":"decreased protein localisation to Golgi apparatus, with protein mislocalised to cytosol","type":"exact"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus, with protein mislocalized to cytosol","type":"exact"}],"termid":"FYPO:0007489"}


id: GO:0043795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + D-glyceraldehyde + H2O = (R)-glycerate + AH2 + H+.","definition_xrefs":["RHEA:36047","PMID:10095793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glyceraldehyde oxidoreductase activity","secondary_identifiers":["EC:1.2.99.8"],"termid":"GO:0043795"}


id: MONDO:0004698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a intestine.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"intestine carcinoma in situ","secondary_identifiers":["DOID:9024","ICD9:230.7","MEDGEN:672856","SCTID:92617001","UMLS:C0685941"],"synonyms":[{"name":"carcinoma in situ of intestine","type":"exact"},{"name":"intestine in situ carcinoma","type":"exact"},{"name":"stage 0 intestine carcinoma","type":"exact"}],"termid":"MONDO:0004698","xrefs":{"Monarch":{"xref_id":"0004698"}}}


id: GO:0048355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the root cap; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"root cap mucilage metabolic process","termid":"GO:0048360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root cap mucilage biosynthetic process","synonyms":[{"name":"root cap mucilage anabolism","type":"exact"},{"name":"root cap mucilage biosynthesis","type":"exact"},{"name":"root cap mucilage formation","type":"exact"},{"name":"root cap mucilage synthesis","type":"exact"}],"termid":"GO:0048355"}


id: PBO:0027118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_zygotic_meiosis_II","termid":"PBO:0027118"}


id: MONDO:1010614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency, non-human animal","termid":"MONDO:1010062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency, domestic cat","secondary_identifiers":["OMIA:001661-9685"],"termid":"MONDO:1010614","xrefs":{"Monarch":{"xref_id":"1010614"}}}


id: PBO:0068434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 4","termid":"PBO:0068434"}


id: GO:0018038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-cysteine amide by hydrolysis and oxidation of an interior Cys-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0085"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-cysteine amidation (obsolete GO:0018038)","termid":"GO:0018038"}


id: PBO:0036058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K8_and_H4-K16_acetylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036058"}


id: GO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"},{"relation_name":"is_a","term_name":"macrophage activation","termid":"GO:0042116"},{"relation_name":"part_of","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage activation involved in immune response","synonyms":[{"name":"macrophage activation during immune response","type":"related"},{"name":"macrophage polarization involved in immune response","type":"exact"}],"termid":"GO:0002281"}


id: SO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which, when transcribed, can be translated into a protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_coding","synonyms":[{"name":"protein-coding","type":"exact"}],"termid":"SO:0000010"}


id: PBO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transporter (predicted)","termid":"PBO:0000583"}


id: PBO:0004585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIP zinc transporter Zrt1","termid":"PBO:0004585"}


id: PBO:0068908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 151, pseudogene","termid":"PBO:0068908"}


id: MONDO:0023154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis multiple non ossifying","secondary_identifiers":["UMLS:C0796000","SCTID:715432009","MEDGEN:450548"],"synonyms":[{"name":"Jaffe Campanacci syndrome","type":"related"},{"name":"disseminated nonossifying fibromas in association with cafe-au-lait spots","type":"related"}],"termid":"MONDO:0023154","xrefs":{"Monarch":{"xref_id":"0023154"}}}


id: GO:0097048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a dendritic cell, a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","PMID:15059845","CL:0000451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell apoptotic process","synonyms":[{"name":"dendritic cell apoptosis","type":"narrow"}],"termid":"GO:0097048"}


id: PBO:0052452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 4","termid":"PBO:0052452"}


id: PBO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-phosphate dipyrophosphorylase/hydroxyethylthiazole kinase","termid":"PBO:0001053"}


id: GO:0046274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignins, a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"lignin catabolic process","synonyms":[{"name":"lignin breakdown","type":"exact"},{"name":"lignin catabolism","type":"exact"},{"name":"lignin degradation","type":"exact"}],"termid":"GO:0046274"}


id: PBO:0055606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3044","termid":"PBO:0055606"}


id: SO:0000828
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a nucleus.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nuclear_sequence","termid":"SO:0000738"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_chromosome","synonyms":[{"name":"nuclear chromosome","type":"exact"}],"termid":"SO:0000828"}


id: GO:0044474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a voltage-gated calcium channel in the bitten organism.","definition_xrefs":["GOC:jl","PMID:20920515","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of calcium channel activity in another organism","termid":"GO:0044473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044474"}


id: PBO:0086619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086619"}


id: GO:0050039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + propane-1,2-diol = (S)-lactaldehyde + H+ + NADPH.","definition_xrefs":["RHEA:15885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lactaldehyde reductase (NADPH) activity","secondary_identifiers":["EC:1.1.1.55","MetaCyc:RXN-15744","KEGG_REACTION:R02259"],"synonyms":[{"name":"1,2-propanediol:NADP+ oxidoreductase activity","type":"related"},{"name":"NADP-1,2-propanediol dehydrogenase activity","type":"related"},{"name":"lactaldehyde (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"propane-1,2-diol:NADP+ oxidoreductase activity","type":"related"},{"name":"propanediol dehydrogenase activity","type":"related"}],"termid":"GO:0050039"}


id: GO:0008933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the specific cleavage of the beta-(1->4) glycosidic linkage between N-acetylmuramyl and N-acetylglucosaminyl residues in peptidoglycan, with the concomitant formation of 1,6-anhydro-N-acetylmuramyl residues.","definition_xrefs":["PMID:10964424","PMID:22748813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"lytic transglycosylase activity","synonyms":[{"name":"murein transglycosylase B activity","type":"narrow"},{"name":"peptidoglycan lytic transglycosylase activity","type":"exact"}],"termid":"GO:0008933"}


id: PBO:0079594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene)","termid":"PBO:0079594"}


id: MONDO:0002733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0002733 (obsolete MONDO:0002733)","termid":"MONDO:0002733","xrefs":{"Monarch":{"xref_id":"0002733"}}}


id: PBO:0082757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate with other rods to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells","termid":"PBO:0082757"}


id: PBO:0072544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 74","termid":"PBO:0072544"}


id: PBO:0074143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B3","termid":"PBO:0074143"}


id: MONDO:0001821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a recurrent or persistent lack of desire for sexual activity. The lack of sexual desire is not attributable to another psychiatric disorder or to the physiological effects of substance use or a general medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychosexual disorder","termid":"MONDO:0000947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoactive sexual desire disorder","secondary_identifiers":["DOID:13868","ICD9:302.71","SCTID:270903007","MEDGEN:43792","UMLS:C0020594","ICD10CM:F52.0","NCIT:C94337"],"synonyms":[{"name":"lack or loss of sexual desire","type":"exact"}],"termid":"MONDO:0001821","xrefs":{"Monarch":{"xref_id":"0001821"}}}


id: PATO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's being incapable of being permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impermeable","termid":"PATO:0000983"}


id: PBO:0063079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPPA antisense RNA 1","termid":"PBO:0063079"}


id: PBO:0053024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3","termid":"PBO:0053024"}


id: GO:0072134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a nephrogenic mesenchymal tissue are generated and organized. Nephrogenic mesenchyme is the tissue made up of loosely connected mesenchymal cells in the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"nephrogenic mesenchyme development","termid":"GO:0072076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrogenic mesenchyme morphogenesis","termid":"GO:0072134"}


id: GO:0031059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of acetyl groups from histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deacetylation at centromere (obsolete GO:0031059)","termid":"GO:0031059"}


id: GO:0006304
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotide sites in DNA, resulting in a change in its properties.","definition_xrefs":["GOC:ma","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006304","terms_by_termid":{"GO:0045007":null}}


id: PBO:0045649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 7","termid":"PBO:0045649"}


id: FYPO:0003917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process during vegetative growth","termid":"FYPO:0002137"},{"relation_name":"is_a","term_name":"abnormal nonsense-mediated decay","termid":"FYPO:0003916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0000294","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased nonsense-mediated decay","synonyms":[{"name":"decreased NMD","type":"exact"},{"name":"decreased nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"decreased nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"decreased nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"},{"name":"reduced nonsense-mediated decay","type":"exact"}],"termid":"FYPO:0003917"}


id: GO:0050772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axonogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"},{"relation_name":"positively_regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axonogenesis","synonyms":[{"name":"activation of axonogenesis","type":"narrow"},{"name":"stimulation of axonogenesis","type":"narrow"},{"name":"up regulation of axonogenesis","type":"exact"},{"name":"up-regulation of axonogenesis","type":"exact"},{"name":"upregulation of axonogenesis","type":"exact"}],"termid":"GO:0050772"}


id: PBO:0050466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HORMAD2 and MTMR3 antisense RNA 1","termid":"PBO:0050466"}


id: PBO:0090265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER ubiquitin-protein ligase E3 Doa10","termid":"PBO:0090265"}


id: MONDO:0008469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary bone dysplasia disorder characterized by congenital hypotrichosis associated with rhizomelic short stature (more pronounced in upper limbs than lower limbs), limited hip abduction and mild genu varum. Flared and irregular metaphyses, delayed and irregular epiphiseal ossification and pear-shaped vertebral bodies are characteristic radiologic findings.","definition_xrefs":["Orphanet:168443"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia-hypotrichosis syndrome","secondary_identifiers":["OMIM:183849","UMLS:C1866728","GARD:10101","MESH:C535783","MEDGEN:357120"],"synonyms":[{"name":"Whyte Petersen McAlister syndrome","type":"related"},{"name":"Whyte syndrome","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with hypotrichosis","type":"related"}],"termid":"MONDO:0008469","xrefs":{"Monarch":{"xref_id":"0008469"}}}


id: PBO:0031537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutive_catalytic_activity","termid":"PBO:0031537"}


id: PBO:0041828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CART prepropeptide","termid":"PBO:0041828"}


id: PBO:0034218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bounding_layer_of","termid":"PBO:0034218"}


id: PBO:0030974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation","termid":"PBO:0030974"}


id: PBO:0088636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease, involved in lipid metabolism","termid":"PBO:0088636"}


id: GO:1990639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-myo-inositol 3,4,5-trisphosphate + H2O = myo-inositol 3,4-bisphosphate + phosphate.","definition_xrefs":["PMID:11348594"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-3,4,5-trisphosphate 5-phosphatase activity (obsolete GO:1990639)","synonyms":[{"name":"inositol-3,4,5-trisphosphate 5-phosphatase activity","type":"exact"}],"termid":"GO:1990639"}


id: FYPO:0007051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell differs from normal during a cellular stress response to zinc ions. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level during cellular response to zinc ion","termid":"FYPO:0001550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"altered protein level during stress response to zinc ion","synonyms":[{"name":"abnormal protein level during stress response to zinc ion","type":"exact"},{"name":"altered cellular protein level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"altered protein level during cellular response to excess zinc","type":"exact"},{"name":"altered protein level during cellular response to high zinc level","type":"exact"},{"name":"altered protein level during cellular response to replete zinc","type":"related"},{"name":"altered protein level during cellular stress response to zinc ion","type":"exact"},{"name":"altered protein level during response to zinc ion stress","type":"exact"},{"name":"altered protein level during response to zinc toxicity","type":"related"},{"name":"altered protein level during stress response to zinc","type":"exact"},{"name":"altered protein level during stress response to zinc ion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007051"}


id: GO:1902274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"},{"relation_name":"positively_regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of (R)-carnitine transmembrane transport","synonyms":[{"name":"activation of (R)-carnitine transmembrane transport","type":"narrow"},{"name":"up regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"up-regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"upregulation of (R)-carnitine transmembrane transport","type":"exact"}],"termid":"GO:1902274"}


id: PBO:0069099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 346, pseudogene","termid":"PBO:0069099"}


id: GO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via 1'-(8-alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0221"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via 1'-(8alpha-FAD)-L-histidine (obsolete GO:0018297)","termid":"GO:0018297"}


id: PBO:0067715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 13","termid":"PBO:0067715"}


id: GO:0034470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in the conversion of one or more primary non-coding RNA (ncRNA) transcripts into one or more mature ncRNA molecules.","definition_xrefs":["PMID:27573892","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA processing (obsolete GO:0034470)","termid":"GO:0034470"}


id: PBO:0073362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family F member 2","termid":"PBO:0073362"}


id: PBO:0088046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme that regulates gluconeogenesis; negatively regulates gluconeogenesis by mediating the glucose-induced ubiquitination of fructose-1,6-bisphosphatase (FBPase); cytoplasmic enzyme that catalyzes the ubiquitination of histones in vitro","termid":"PBO:0088046"}


id: GO:0097350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective elimination of senescent neutrophils from the body by autoregulatory mechanisms.","definition_xrefs":["GOC:BHF","PMID:21957127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic cell clearance","termid":"GO:0043277"},{"relation_name":"part_of","term_name":"neutrophil homeostasis","termid":"GO:0001780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"neutrophil clearance","termid":"GO:0097350"}


id: MONDO:0007217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A3","secondary_identifiers":["icd11.foundation:153446585","Orphanet:93393","DOID:0110966","MESH:C537090","MEDGEN:354670","GARD:963","UMLS:C1862140","OMIM:112700"],"synonyms":[{"name":"BDA3","type":"exact"},{"name":"Brachymesophalangy 5","type":"related"},{"name":"brachydactyly, type A3","type":"related"},{"name":"brachydactyly-clinodactyly","type":"exact"},{"name":"brachymesophalangy V","type":"exact"}],"termid":"MONDO:0007217","xrefs":{"Monarch":{"xref_id":"0007217"}}}


id: GO:1990108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a linear polymer of ubiquitin, formed by the amino-terminal methionine (M1) of one ubiquitin molecule and by the carboxy-terminal glycine (G76) of the next, is removed from a protein.","definition_xrefs":["PMID:23708998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein linear deubiquitination","termid":"GO:1990108"}


id: MONDO:1011528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Histiocytosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytosis, non-human animal","termid":"MONDO:1011436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histiocytosis, cattle","secondary_identifiers":["OMIA:000474-9913"],"termid":"MONDO:1011528","xrefs":{"Monarch":{"xref_id":"1011528"}}}


id: PBO:0060786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B11 pseudogene 1","termid":"PBO:0060786"}


id: MONDO:1011770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrosis of digits, non-human animal","secondary_identifiers":["OMIA:001665"],"termid":"MONDO:1011770","xrefs":{"Monarch":{"xref_id":"1011770"}}}


id: PBO:0057708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1295a","termid":"PBO:0057708"}


id: MONDO:0013244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brachydactyly type E in which the cause of the disease is a mutation in the PTHLH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly type E","termid":"MONDO:0019677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type E2","secondary_identifiers":["DOID:0110976","UMLS:C3150644","GARD:15654","OMIM:613382","MEDGEN:461994"],"synonyms":[{"name":"BDE2","type":"exact"},{"name":"PTHLH brachydactyly type E","type":"exact"},{"name":"brachydactyly type E caused by mutation in PTHLH","type":"exact"},{"name":"brachydactyly type E2","type":"exact"},{"name":"brachydactyly, type E2","type":"related"}],"termid":"MONDO:0013244","xrefs":{"Monarch":{"xref_id":"0013244"}}}


id: PBO:0056502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain 4, DNA glycosylase","termid":"PBO:0056502"}


id: GO:0002783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antifungal peptide.","definition_xrefs":["ISBN:0781735149","PMID:11807545","GOC:add","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"},{"relation_name":"part_of","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}


id: PR:Q9UTD8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTD8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ERD1 homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.01c","synonyms":[{"name":"Spom972h-erd1","type":"exact"}],"termid":"PR:Q9UTD8"}


id: PBO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BN member 2 pseudogene","termid":"PBO:0062248"}


id: GO:0051072
data:
  {"annotated_genes":["SJAG_04878","SJAG_01963","SJAG_01426","SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92531,94445,99806,104924],"is_not":false,"summary":null,"term":"GO:0051072"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the pyruvylated galactose residue 4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3-. The galactose residue is part of a larger polysaccharide chain.","definition_xrefs":["GOC:ai","PMID:15173185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_01426":null,"SJAG_01963":null,"SJAG_04878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"4,6-pyruvylated galactose residue biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"4,6-pyruvylated galactose residue anabolism","type":"exact"},{"name":"4,6-pyruvylated galactose residue biosynthesis","type":"exact"},{"name":"4,6-pyruvylated galactose residue formation","type":"exact"},{"name":"4,6-pyruvylated galactose residue synthesis","type":"exact"},{"name":"4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3 biosynthesis","type":"exact"},{"name":"4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3 biosynthetic process","type":"exact"},{"name":"PvGal biosynthesis","type":"exact"},{"name":"PvGal biosynthetic process","type":"exact"}],"termid":"GO:0051072","terms_by_termid":{"GO:0051072":null}}


id: GO:0034108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["PMID:14754397","GOC:add","PMID:12905029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"positively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte clearance","synonyms":[{"name":"positive regulation of RBC clearance","type":"exact"},{"name":"positive regulation of neocytolysis","type":"narrow"},{"name":"positive regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034108"}


id: FYPO:0000079
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118268,118283],"is_not":false,"summary":null,"term":"FYPO:0000079"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to caspofungin. Cells stop growing (and may die) at a concentration of caspofungin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to echinocandin","termid":"FYPO:0007947"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to caspofungin","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["pmk1delta","pck2delta"],"synonyms":[{"name":"hypersensitive to caspofungin","type":"exact"},{"name":"sensitive to caspofungin during mitotic cell cycle","type":"related"},{"name":"sensitive to caspofungin during vegetative growth","type":"exact"},{"name":"sensitive to glucan synthase inhibitor","type":"broad"}],"termid":"FYPO:0000079","terms_by_termid":{"FYPO:0000079":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0032453
data:
  {"annotated_genes":["SJAG_01465","SJAG_03635","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86609],"is_not":false,"summary":null,"term":"GO:0032453"},{"annotations":[86610,71182,112195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 4 of the histone H3 protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0032452"],"is_obsolete":false,"name":"histone H3K4 demethylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822467","Reactome:R-HSA-9822461"],"synonyms":[{"name":"histone H3-K4 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-4 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"histone demethylase activity (H3K4-specific)","type":"exact"}],"termid":"GO:0032453","terms_by_termid":{"GO:0032453":null,"GO:0034647":null}}


id: MONDO:0013487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"recurrent Neisseria infections due to factor D deficiency","secondary_identifiers":["Orphanet:169467","OMIM:613912","SCTID:234607008","UMLS:C0398764","MEDGEN:97989","icd11.foundation:528757185","NANDO:2200788","ICD9:279.8","MESH:C565027","GARD:17055"],"synonyms":[{"name":"CFDD","type":"related"},{"name":"complement factor D deficiency","type":"related"},{"name":"factor D deficiency","type":"related"},{"name":"recurrent Neisseria infections due to factor D deficiency","type":"exact"}],"termid":"MONDO:0013487","xrefs":{"Monarch":{"xref_id":"0013487"}}}


id: PBO:0081472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 346","termid":"PBO:0081472"}


id: PBO:0056646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 7","termid":"PBO:0056646"}


id: PBO:0081872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 814","termid":"PBO:0081872"}


id: MONDO:0006558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pregnancy-associated autoimmune skin disease that is characterized by an itchy rash that develops into blisters. It is most common during the second and third trimesters of pregnancy. It was previously known as herpes gestationis although it has no association with the herpes virus whatsoever.","direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus","termid":"MONDO:0006594"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"pemphigoid gestationis","secondary_identifiers":["Wikipedia:Gestational_pemphigoid","NCIT:C85003","MedDRA:10019939","GARD:6497","UMLS:C0019343","DOID:14482","DOID:0040098","Orphanet:63275","EFO:1000709","ICD9:646.80","SCTID:86081009","MEDGEN:9233","MESH:D006559","icd11.foundation:1405755890"],"synonyms":[{"name":"Herpes gestationis","type":"exact"},{"name":"Herpes gestationis (disorder)","type":"exact"},{"name":"Herpes gestationis NOS (disorder)","type":"exact"},{"name":"Herpes gestationis unspecified (disorder)","type":"exact"},{"name":"gestational herpes","type":"exact"},{"name":"gestational pemphigoid","type":"exact"},{"name":"pemphigoid gestationis","type":"exact"},{"name":"pemphigus gestationis","type":"related"}],"termid":"MONDO:0006558","xrefs":{"Monarch":{"xref_id":"0006558"}}}


id: GO:1900310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltoheptaose metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose metabolic process","termid":"GO:1900309"},{"relation_name":"negatively_regulates","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maltoheptaose metabolic process","synonyms":[{"name":"down regulation of maltoheptaose metabolic process","type":"exact"},{"name":"down regulation of maltoheptaose metabolism","type":"exact"},{"name":"down-regulation of maltoheptaose metabolic process","type":"exact"},{"name":"down-regulation of maltoheptaose metabolism","type":"exact"},{"name":"downregulation of maltoheptaose metabolic process","type":"exact"},{"name":"downregulation of maltoheptaose metabolism","type":"exact"},{"name":"inhibition of maltoheptaose metabolic process","type":"narrow"},{"name":"inhibition of maltoheptaose metabolism","type":"narrow"},{"name":"negative regulation of maltoheptaose metabolism","type":"exact"}],"termid":"GO:1900310"}


id: PBO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_endoplasmic_reticulum_stress","termid":"PBO:0035790"}


id: GO:2000581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ATP-dependent microtubule motor activity, plus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of microtubule motor activity, plus-end-directed (obsolete GO:2000581)","synonyms":[{"name":"negative regulation of ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"negative regulation of kinesin ATP phosphohydrolase (plus-end-directed)","type":"exact"},{"name":"negative regulation of kinesin activity","type":"related"},{"name":"negative regulation of plus-end-directed kinesin ATPase activity","type":"exact"},{"name":"negative regulation of plus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000581"}


id: PBO:0113529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; member of serine carboxypeptidase family; N-glycosylated","termid":"PBO:0113529"}


id: SO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif to which the S. pombe Zas1 protein binds. The consensus sequence is 5'-(Y)CCCCAY-3'.","definition_xrefs":["PMID:29735745","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zas1_recognition_motif","synonyms":[{"name":"Zas1 recognition motif","type":"exact"}],"termid":"SO:0002215"}


id: GO:0071038
data:
  {"annotated_genes":["SJAG_03984","SJAG_01191","SJAG_01818","SJAG_03179","SJAG_04818","SJAG_00854","SJAG_04321","SJAG_01521","SJAG_04084","SJAG_04006","SJAG_03745","SJAG_04824","SJAG_04153"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91456,92279,95117,96449,101269,103582,104427,105631,106623,112402,114582,115023,117429],"is_not":false,"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"A nuclear tRNA surveillance pathway, dependent on the TRAMP exosome adaptor and the nuclear exosome.","definition_xrefs":["GOC:vw","PMID:35901126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"tRNA surveillance","termid":"GO:0106354"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"TRAMP-dependent tRNA surveillance pathway","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071038","terms_by_termid":{"GO:0071038":null}}


id: GO:1903430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell maturation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17459944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"negatively_regulates","term_name":"cell maturation","termid":"GO:0048469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell maturation","synonyms":[{"name":"down regulation of cell maturation","type":"exact"},{"name":"down regulation of functional differentiation","type":"related"},{"name":"down-regulation of cell maturation","type":"exact"},{"name":"down-regulation of functional differentiation","type":"related"},{"name":"downregulation of cell maturation","type":"exact"},{"name":"downregulation of functional differentiation","type":"related"},{"name":"inhibition of cell maturation","type":"narrow"},{"name":"inhibition of functional differentiation","type":"related"},{"name":"negative regulation of functional differentiation","type":"related"}],"termid":"GO:1903430"}


id: PATO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000372 absolute distance value (obsolete PATO:0000372)","termid":"PATO:0000372"}


id: GO:0035512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolytic removal of the methyl group from one or more nucleotides within a DNA molecule.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrolytic DNA demethylation (obsolete GO:0035512)","termid":"GO:0035512"}


id: GO:0071645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 4.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 4 production","termid":"GO:0071643"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 4 production","termid":"GO:0071606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"positive regulation of CCL4 production","type":"exact"},{"name":"positive regulation of MIP-1b production","type":"exact"},{"name":"positive regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071645"}


id: GO:0003933
data:
  {"annotated_genes":["SJAG_04711","SJAG_00376","SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003934"},{"annotations":[86688,100334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003935"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the imidazole ring of GTP, releasing formate. Two C-N bonds are hydrolyzed and the pentase unit is isomerized.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_03275":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"GTP cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0003933","terms_by_termid":{"GO:0003934":null,"GO:0003935":null}}


id: MONDO:0002859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal tumor with skeletal muscle differentiation affecting the breast.","definition_xrefs":["NCIT:C5190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast rhabdomyosarcoma","secondary_identifiers":["UMLS:C1332637","DOID:4060","MEDGEN:231970"],"synonyms":[{"name":"breast rhabdomyosarcoma","type":"exact"},{"name":"breast rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of breast","type":"exact"},{"name":"rhabdomyosarcoma of breast","type":"exact"},{"name":"rhabdomyosarcoma of the breast","type":"exact"}],"termid":"MONDO:0002859","xrefs":{"Monarch":{"xref_id":"0002859"}}}


id: PBO:0086989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of transcription at Start; binds to SBF (Swi4p-Swi6p) at SCB promoter elements in G1 to repress transcription; inhibitor of Start that retains Cdc28-Cln3 at the ER; acts with Ydj1p to promote release of the complex in a growth-mediated positive feedback loop to trigger Start; Srl3p is unstable and degraded by SCF-Grr1 after Cdc28p-dependent phosphorylation; contains a GTB (G1/S transcription factor binding) motif; binds SBF-regulated promoters in HU-treated cells; Cdc28p substrate","termid":"PBO:0086989"}


id: MONDO:0002959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving a spinal nerve root (see spinal nerve roots) which may result from compression related to intervertebral disk displacement; spinal cord injuries; spinal diseases; and other conditions. Clinical manifestations include radicular pain, weakness, and sensory loss referable to structures innervated by the involved nerve root.","definition_xrefs":["MESH:D011843"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"polyradiculopathy","termid":"MONDO:0002960"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiculopathy","secondary_identifiers":["UMLS:C0700594","DOID:4306","SCTID:72274001","ICD10CM:M54.1","icd11.foundation:1802542189","MEDGEN:147133"],"synonyms":[{"name":"nerve root disorder","type":"exact"}],"termid":"MONDO:0002959","xrefs":{"Monarch":{"xref_id":"0002959"}}}


id: GO:0003683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete lamin/chromatin binding (obsolete GO:0003683)","synonyms":[{"name":"lamin/chromatin binding","type":"exact"}],"termid":"GO:0003683"}


id: FYPO:0006063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septin ring assembly begins in mitotic interphase instead of during nuclear division.","definition_xrefs":["PMID:15385632","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septin ring assembly during vegetative growth","termid":"FYPO:0006061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"septin ring assembly during mitotic interphase","synonyms":[{"name":"septin ring assembly during interphase of mitotic cell cycle","type":"exact"},{"name":"septin ring assembly during mitotic interphase during vegetative growth","type":"exact"},{"name":"septin ring formation during mitotic interphase","type":"exact"}],"termid":"FYPO:0006063"}


id: MONDO:0009173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, gastroenterological disease characterized by early-onset failure to thrive, edema, hypoproteinemia, diarrhea and fat malabsorption (or steatorrhea) in the presence of very low or absent trypsin activity in duodenal fluid. Celiac disease, or other pancreatic or mucosal disorders, may be associated.","definition_xrefs":["Orphanet:168601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital enteropathy due to enteropeptidase deficiency","secondary_identifiers":["GARD:17038","NANDO:2200910","SCTID:190952002","MESH:C562649","DOID:0111667","ICD9:277.89","OMIM:226200","UMLS:C0268416","MEDGEN:82802"],"synonyms":[{"name":"congenital enterokinase deficiency","type":"exact"},{"name":"enterokinase deficiency","type":"related"},{"name":"enteropeptidase deficiency","type":"related"}],"termid":"MONDO:0009173","xrefs":{"Monarch":{"xref_id":"0009173"}}}


id: GO:0047663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + kanamycin B = N(6')-acetylkanamycin B + CoA + H+. This is acetylation of the 6'-amino group of the 6-deoxy-6-aminoglucose ring.","definition_xrefs":["EC:2.3.1.82","RHEA:16449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"aminoglycoside 6'-N-acetyltransferase activity","secondary_identifiers":["MetaCyc:AMINOGLYCOSIDE-N6-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R01889"],"synonyms":[{"name":"6'-aminoglycoside-N-acetyltransferase activity","type":"related"},{"name":"AAC(6') activity","type":"related"},{"name":"acetyl-CoA:kanamycin-B N6'-acetyltransferase activity","type":"narrow"},{"name":"aminoglycoside N6'-acetyltransferase activity","type":"exact"},{"name":"aminoglycoside-6'-acetyltransferase activity","type":"related"},{"name":"aminoglycoside-6-N-acetyltransferase activity","type":"related"},{"name":"kanamycin 6'-N-acetyltransferase activity","type":"narrow"}],"termid":"GO:0047663"}


id: PBO:0092008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit (15S) rRNA, rns","termid":"PBO:0092008"}


id: MONDO:0024417
data:
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id: PBO:0043464
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id: RO:0002349
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id: PBO:0065132
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id: MONDO:0003583
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id: MONDO:0018925
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id: PBO:0030464
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id: GO:1905768
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id: MONDO:0008435
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id: GO:0141221
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id: MONDO:0001127
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id: FYPO:0003434
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id: GO:0070729
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id: PBO:0075508
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id: PBO:0114463
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id: GO:0048402
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id: GO:0050165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pantetheine = ADP + pantetheine 4'-phosphate.","definition_xrefs":["MetaCyc:PANTETHEINE-KINASE-RXN","EC:2.7.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"pantetheine kinase activity","secondary_identifiers":["RHEA:22472"],"synonyms":[{"name":"ATP:pantetheine 4'-phosphotransferase activity","type":"related"},{"name":"pantetheine kinase (phosphorylating)","type":"related"}],"termid":"GO:0050165"}


id: GO:0102337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetracosanoyl-CoA(4-) + malonyl-CoA(5-) + H+ = 3-oxohexacosanoyl-CoA + carbon dioxide + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-cerotoyl-CoA synthase activity (obsolete GO:0102337)","termid":"GO:0102337"}


id: PBO:0084416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major apurinic/apyrimidinic endonuclease; 3'-repair diesterase; involved in repair of DNA damage by oxidation and alkylating agents; also functions as a 3'-5' exonuclease to repair 7,8-dihydro-8-oxodeoxyguanosine; genetically interacts with NTG1 to maintain mitochondrial genome integrity","termid":"PBO:0084416"}


id: FYPO:0001159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular pH","synonyms":[{"name":"increased cellular pH during mitotic cell cycle","type":"related"},{"name":"increased cellular pH during vegetative growth","type":"exact"},{"name":"increased cellular pH level","type":"exact"}],"termid":"FYPO:0001159"}


id: PBO:0031495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_oxidative_stress","termid":"PBO:0031495"}


id: MONDO:0018319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"neuralgia","termid":"MONDO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"familial episodic pain syndrome","secondary_identifiers":["GARD:12684","OMIMPS:615040","MEDGEN:1682682","Orphanet:391384","UMLS:C5190598","DOID:0111728"],"synonyms":[{"name":"FEPS","type":"exact"}],"termid":"MONDO:0018319","xrefs":{"Monarch":{"xref_id":"0018319"}}}


id: MONDO:0003857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary fibrous tumor/hemangiopericytoma, grade 3 that arises from the brain and occurs in the adult population.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","termid":"MONDO:0002176"},{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"malignant central nervous system mesenchymal, non-meningothelial neoplasm","termid":"MONDO:0037740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult intracranial malignant hemangiopericytoma","secondary_identifiers":["MEDGEN:235288","NCIT:C9183","UMLS:C1334558","DOID:6333"],"synonyms":[{"name":"adult intracranial anaplastic hemangiopericytoma","type":"exact"},{"name":"adult intracranial solitary fibrous tumor/hemangiopericytoma, grade 3","type":"exact"},{"name":"adult malignant intracranial hemangiopericytoma","type":"exact"},{"name":"central nervous system solitary fibrous tumor/hemangiopericytoma, grade 3","type":"exact"},{"name":"malignant adult intracranial hemangiopericytoma","type":"exact"}],"termid":"MONDO:0003857","xrefs":{"Monarch":{"xref_id":"0003857"}}}


id: GO:0043121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin, any of a family of growth factors that prevent apoptosis in neurons and promote nerve growth.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"neurotrophin binding","secondary_identifiers":["GO:0048404","GO:0048405"],"synonyms":[{"name":"NT 4/5 binding","type":"narrow"},{"name":"NT-3 binding","type":"narrow"},{"name":"NT-4 binding","type":"narrow"},{"name":"NT-4/5 binding","type":"narrow"},{"name":"NT-5 binding","type":"narrow"},{"name":"NT3 binding","type":"narrow"},{"name":"NT4 binding","type":"narrow"},{"name":"NT5 binding","type":"narrow"},{"name":"neurotrophic factor binding","type":"exact"},{"name":"neurotrophin 3 binding","type":"narrow"},{"name":"neurotrophin 4/5 binding","type":"narrow"},{"name":"neurotrophin TRK receptor activity","type":"related"},{"name":"neurotrophin TRKA receptor activity","type":"related"},{"name":"neurotrophin TRKB receptor activity","type":"related"},{"name":"neurotrophin TRKC receptor activity","type":"related"},{"name":"neurotrophin-3 binding","type":"narrow"},{"name":"neurotrophin-4/5 binding","type":"narrow"}],"termid":"GO:0043121"}


id: MONDO:0012256
data:
  {"annotated_genes":["SJAG_04506","SJAG_00199","SJAG_04292"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84406,84407,84408],"is_not":false,"summary":null,"term":"MONDO:0012256"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 28 is a pure form of hereditary spastic paraplegia characterized by a childhood or adolescent onset of slowly progressive, pure crural muscle spastic paraparesis which manifests with mild lower limb weakness, gait difficulties, extensor plantar responses, and hyperreflexia of lower extremities. Less common manifestations reported include cerebellar oculomotor disturbance with saccadic eye pursuit, pes cavus and scoliosis. Some patients also present pin and vibration sensory loss in distal legs.","definition_xrefs":["Orphanet:101008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_04292":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 28","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:609340","UMLS:C1836295","SCTID:763376002","GARD:16941","MEDGEN:332174","DOID:0110779","MESH:C563732"],"synonyms":[{"name":"DDHD1 autosomal recessive pure spastic paraplegia","type":"exact"},{"name":"SPG28","type":"exact"},{"name":"autosomal recessive pure spastic paraplegia caused by mutation in DDHD1","type":"exact"},{"name":"autosomal recessive spastic paraplegia 28","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 28","type":"exact"},{"name":"hereditary spastic paraplegia 28","type":"exact"},{"name":"hereditary spastic paraplegia type 28","type":"exact"},{"name":"spastic paraplegia 28, autosomal recessive","type":"related"}],"termid":"MONDO:0012256","terms_by_termid":{"MONDO:0012256":null},"xrefs":{"Monarch":{"xref_id":"0012256"}}}


id: MONDO:0009946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency is a rare, hereditary, hemolytic anemia due to an erythrocyte nucleotide metabolism disorder characterized by mild to moderate hemolytic anemia associated with basophilic stippling and the accumulation of high concentrations of pyrimidine nucleotides within the erythrocyte. Patients present with variable features of jaundice, splenomegaly, hepatomegaly, gallstones, and sometimes require transfusions. Rare cases of mild development delay and learning difficulties are reported.","definition_xrefs":["Orphanet:35120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hemolytic anemia due to pyrimidine 5' nucleotidase deficiency","secondary_identifiers":["MESH:C564859","GARD:16635","OMIM:266120","UMLS:C1849507","MEDGEN:341470"],"synonyms":[{"name":"P5N deficiency","type":"exact"},{"name":"UMPH1 deficiency","type":"exact"},{"name":"Umph1 deficiency","type":"related"},{"name":"anemia, hemolytic, due to UMPH1 deficiency","type":"exact"},{"name":"hemolytic Anaemia due to P5N deficiency","type":"related"},{"name":"hemolytic Anaemia due to Umph1 deficiency","type":"related"},{"name":"hemolytic Anemia due to P5N deficiency","type":"related"},{"name":"hemolytic Anemia due to Umph1 deficiency","type":"related"},{"name":"pyrimidine 5-prime Nucleotidase deficiency, hemolytic Anaemia due to","type":"related"},{"name":"pyrimidine 5-prime Nucleotidase deficiency, hemolytic Anemia due to","type":"related"},{"name":"uridine 5'-monophosphate hydrolase deficiency","type":"exact"},{"name":"uridine 5-prime monophosphate hydrolase deficiency, hemolytic anaemia due to","type":"related"},{"name":"uridine 5-prime monophosphate hydrolase deficiency, hemolytic anemia due to","type":"related"}],"termid":"MONDO:0009946","xrefs":{"Monarch":{"xref_id":"0009946"}}}


id: GO:0045143
data:
  {"annotated_genes":["SJAG_02606","SJAG_02104","SJAG_00600","SJAG_03683","SJAG_01224","SJAG_01278","SJAG_04259","SJAG_04143","SJAG_03681","SJAG_02286","SJAG_01371","SJAG_03327","SJAG_07002","SJAG_02814","SJAG_01082","SJAG_01067","SJAG_05260","SJAG_03685","SJAG_03092","SJAG_00418","SJAG_03942","SJAG_03698","SJAG_03220","SJAG_01263","SJAG_00794","SJAG_01805","SJAG_00918","SJAG_05196","SJAG_00756","SJAG_01837","SJAG_05266","SJAG_04076","SJAG_03048","SJAG_04457","SJAG_01538","SJAG_03287","SJAG_04950","SJAG_01873","SJAG_03989","SJAG_05019","SJAG_00229","SJAG_05319","SJAG_01601","SJAG_04126","SJAG_02346","SJAG_01211","SJAG_01777","SJAG_05220","SJAG_02731","SJAG_05295","SJAG_03437","SJAG_03217","SJAG_03926","SJAG_03680","SJAG_00727","SJAG_05226","SJAG_04623","SJAG_01775"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88568,90990,92990,93075,109331,112359,113630,116000,116837],"is_not":false,"summary":null,"term":"GO:0045143"},{"annotations":[114670,112912,106978,100517,92989,87023,116192,89493,97820],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[92077,110368,86970,106979,109694],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007129"},{"annotations":[88801,116193],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[105113,88970],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[101999,104265,99110,86616,88971],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[92993,103673,113632,112360,106980,98321,112913,100980,115035,100459],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[115078,116687,116825,86617,95911,105114],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045141"},{"annotations":[105115,113119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044821"},{"annotations":[109334,93080],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090006"},{"annotations":[101575],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"},{"annotations":[115815],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[88351,97099,93006,106982,116051,115060,88955,94507,99707,106664,104639,109046,90189,108296,100521,97828,94756,109463,109504,112363,113231,108036,101622],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner; this pairing off, referred to as synapsis, permits genetic recombination. One homolog (both sister chromatids) of each morphologic type goes into each of the resulting chromosome sets.","definition_xrefs":["GOC:ai","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":58,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00418":null,"SJAG_00600":null,"SJAG_00727":null,"SJAG_00756":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01067":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01263":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01538":null,"SJAG_01601":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_02104":null,"SJAG_02286":null,"SJAG_02346":null,"SJAG_02606":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03287":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03680":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04143":null,"SJAG_04259":null,"SJAG_04457":null,"SJAG_04623":null,"SJAG_04950":null,"SJAG_05019":null,"SJAG_05196":null,"SJAG_05220":null,"SJAG_05226":null,"SJAG_05260":null,"SJAG_05266":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"homologous chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007061"],"synonyms":[{"name":"meiosis I, chromosome segregation","type":"exact"}],"termid":"GO:0045143","terms_by_termid":{"GO:0007129":null,"GO:0030999":null,"GO:0031619":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0045143":null,"GO:0051455":null,"GO:0062123":null,"GO:0070197":null,"GO:0090006":null,"GO:1904967":null,"GO:1990813":null}}


id: FYECO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cysteine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cysteine","synonyms":[{"name":"C added","type":"exact"},{"name":"Cys added","type":"exact"}],"termid":"FYECO:0000179"}


id: PBO:0068704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 85, pseudogene","termid":"PBO:0068704"}


id: PBO:0053698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 899","termid":"PBO:0053698"}


id: PBO:0059595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 7","termid":"PBO:0059595"}


id: GO:0140146
data:
  {"annotated_genes":["SJAG_04698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114696],"is_not":false,"summary":null,"term":"GO:0140146"}]},"cv_name":"biological_process","definition":"The directed movement of calcium cations into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:vw","PMID:8628289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"calcium ion import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140146","terms_by_termid":{"GO:0140146":null}}


id: GO:0062156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel activity","synonyms":[{"name":"mitoK-ATP activity","type":"exact"},{"name":"mitochondrial potassium channel activity","type":"exact"}],"termid":"GO:0062156"}


id: GO:0021739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesencephalic trigeminal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesencephalic trigeminal nucleus development","termid":"GO:0021739"}


id: MONDO:0017062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated spina bifida","termid":"MONDO:0019351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"spina bifida aperta","secondary_identifiers":["MEDGEN:181490","GARD:20951","SCTID:58557008","Orphanet:268369","UMLS:C0917813","icd11.foundation:187581000"],"termid":"MONDO:0017062","xrefs":{"Monarch":{"xref_id":"0017062"}}}


id: PBO:0071464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 5","termid":"PBO:0071464"}


id: PBO:0091975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, probable 3'UTR of ptc2","termid":"PBO:0091975"}


id: GO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of heart contraction.","definition_xrefs":["GOC:tb","GOC:dph","PMID:10358008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart rate","synonyms":[{"name":"cardiac chronotropy","type":"exact"},{"name":"regulation of heart contraction rate","type":"exact"},{"name":"regulation of rate of heart contraction","type":"exact"}],"termid":"GO:0002027"}


id: PBO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle regulator of NHEJ","termid":"PBO:0044496"}


id: GO:0071065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular cell adhesion molecule-1.","definition_xrefs":["PMID:10209034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex","synonyms":[{"name":"ITGA9-ITGB1-VCAM1 complex","type":"narrow"}],"termid":"GO:0071065"}


id: PBO:0059374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 7","termid":"PBO:0059374"}


id: MONDO:0014847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SYCE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 15","secondary_identifiers":["DOID:0070172","GARD:16173","MEDGEN:934746","OMIM:616950","UMLS:C4310779"],"synonyms":[{"name":"SPGF15","type":"exact"},{"name":"SYCE1 azoospermia","type":"exact"},{"name":"azoospermia caused by mutation in SYCE1","type":"exact"},{"name":"spermatogenic failure 15","type":"exact"},{"name":"spermatogenic failure 15; SPGF15","type":"exact"},{"name":"spermatogenic failure type 15","type":"exact"}],"termid":"MONDO:0014847","xrefs":{"Monarch":{"xref_id":"0014847"}}}


id: PBO:0066544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 8","termid":"PBO:0066544"}


id: FYPO:0003283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of copper ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal copper import","synonyms":[{"name":"abnormal cellular copper import","type":"exact"},{"name":"abnormal copper cation import","type":"exact"},{"name":"abnormal copper import during mitotic cell cycle","type":"related"},{"name":"abnormal copper import during vegetative growth","type":"exact"},{"name":"abnormal copper import into cell","type":"exact"},{"name":"abnormal copper ion import","type":"exact"},{"name":"abnormal copper ion import across plasma membrane","type":"exact"}],"termid":"FYPO:0003283"}


id: PBO:0043702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 8","termid":"PBO:0043702"}


id: GO:1904735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fatty acid beta-oxidation using acyl-CoA dehydrogenase.","definition_xrefs":["GOC:TermGenie","PMID:25416781","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation","termid":"GO:0031998"},{"relation_name":"regulates","term_name":"fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:0033539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:1904735"}


id: GO:0051092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB.","definition_xrefs":["PMID:15170030","GOC:dph","GOC:tb","PMID:15087454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-binding transcription factor activity","termid":"GO:0051091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"positive regulation of NF-kappaB transcription factor activity","synonyms":[{"name":"NF-kappaB activation","type":"exact"},{"name":"activation of NF-kappaB","type":"exact"},{"name":"activation of NF-kappaB transcription factor","type":"exact"}],"termid":"GO:0051092"}


id: MONDO:0008049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal myopathy","termid":"MONDO:0018949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, distal, infantile-onset","secondary_identifiers":["OMIM:160300","DOID:0070196","UMLS:C4011725","MEDGEN:860162"],"synonyms":[{"name":"myopathy, distal, infantile-onset","type":"exact"}],"termid":"MONDO:0008049","xrefs":{"Monarch":{"xref_id":"0008049"}}}


id: PBO:0090717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S20","termid":"PBO:0090717"}


id: GO:1900821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orlandin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"orlandin metabolic process","termid":"GO:1900819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"orlandin biosynthetic process","synonyms":[{"name":"orlandin anabolism","type":"exact"},{"name":"orlandin biosynthesis","type":"exact"},{"name":"orlandin formation","type":"exact"},{"name":"orlandin synthesis","type":"exact"}],"termid":"GO:1900821"}


id: PBO:0029501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_abnormal_germ_tube_morphology_(obsolete_FYPO:0002214)","termid":"PBO:0029501"}


id: PBO:0075538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E18","termid":"PBO:0075538"}


id: PBO:0005688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner MTOC Attachment site","termid":"PBO:0005688"}


id: PBO:0056517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 4","termid":"PBO:0056517"}


id: MONDO:0014613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pulmonary fibrosis and/or bone marrow failure, Telomere-related in which the cause of the disease is a mutation in the RTEL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete idiopathic pulmonary fibrosis (obsolete MONDO:0008345)","termid":"MONDO:0008345"},{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"},{"relation_name":"is_a","term_name":"dyskeratosis congenita and related telomere biology disorder","termid":"MONDO:0800467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 3","secondary_identifiers":["UMLS:C4225346","OMIM:616373","GARD:16098","MEDGEN:901644"],"synonyms":[{"name":"PFBMFT3","type":"related"},{"name":"RTEL1 pulmonary fibrosis and/or bone marrow failure, Telomere-related","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 3","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related caused by mutation in RTEL1","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 3","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 3","type":"exact"}],"termid":"MONDO:0014613","xrefs":{"Monarch":{"xref_id":"0014613"}}}


id: MONDO:1012513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"verrucous epidermal keratinocytic nevi, non-human animal","termid":"MONDO:1011762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verrucous epidermal keratinocytic nevi, dog","secondary_identifiers":["OMIA:002117-9615"],"termid":"MONDO:1012513","xrefs":{"Monarch":{"xref_id":"1012513"}}}


id: PBO:0055419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2849","termid":"PBO:0055419"}


id: MONDO:0005701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by Chlamydia trachomatis.","definition_xrefs":["NCIT:C34463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"chlamydia infectious disease","termid":"MONDO:0021697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlamydia trachomatis infectious disease","secondary_identifiers":["EFO:0007205","MESH:D002690","ICD9:079.88","DOID:11263","SCTID:105629000","ICD9:078.88","ICD9:079.98"],"synonyms":[{"name":"Chlamydia trachomatis caused disease or disorder","type":"exact"},{"name":"Chlamydia trachomatis disease or disorder","type":"exact"},{"name":"Chlamydia trachomatis infectious disease","type":"exact"},{"name":"Chlamydial infection","type":"exact"},{"name":"chlamydia","type":"related"},{"name":"chlamydia trachomatis infectious disease","type":"exact"},{"name":"chlamydial disease","type":"exact"}],"termid":"MONDO:0005701","xrefs":{"Monarch":{"xref_id":"0005701"}}}


id: PBO:0067405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 515, pseudogene","termid":"PBO:0067405"}


id: GO:0071671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of smooth muscle cell chemotaxis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"smooth muscle cell chemotaxis","termid":"GO:0071670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell chemotaxis","termid":"GO:0071671"}


id: PBO:0083273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay","termid":"PBO:0083273"}


id: MONDO:0006229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the stomach. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"gastric neuroendocrine neoplasm","termid":"MONDO:0003111"},{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric small cell neuroendocrine carcinoma","secondary_identifiers":["DOID:6552","UMLS:C1333788","EFO:1000277","MEDGEN:272664","ONCOTREE:STSC"],"synonyms":[{"name":"Oat cell carcinoma of stomach","type":"exact"},{"name":"Oat cell carcinoma of the stomach","type":"exact"},{"name":"STSC","type":"related"},{"name":"gastric Oat cell carcinoma","type":"exact"},{"name":"gastric small cell carcinoma","type":"exact"},{"name":"gastric small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell carcinoma of stomach","type":"exact"},{"name":"small cell carcinoma of the stomach","type":"exact"},{"name":"stomach small cell carcinoma","type":"exact"}],"termid":"MONDO:0006229","xrefs":{"Monarch":{"xref_id":"0006229"}}}


id: PBO:0067128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 174, pseudogene","termid":"PBO:0067128"}


id: PBO:0055937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 43","termid":"PBO:0055937"}


id: MONDO:0015399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glossopalatine ankylosis is a disorder belonging to the group of oromandibular-limb hypogenesis syndromes (OLHS) and is characterized by the presence of an intraoral band of variable thickness attaching the tongue to the hard palate or maxillary alveolar ridge.","definition_xrefs":["Orphanet:141163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oromandibular-limb hypogenesis syndrome","termid":"MONDO:0017139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"glossopalatine ankylosis","secondary_identifiers":["UMLS:C4303569","MEDGEN:929238","GARD:19954","SCTID:717814004","icd11.foundation:1608847387"],"synonyms":[{"name":"Cosack syndrome","type":"exact"}],"termid":"MONDO:0015399","xrefs":{"Monarch":{"xref_id":"0015399"}}}


id: MOD:00446
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of a residue with 4-hydroxynonenal.","definition_xrefs":["PubMed:15133838","PubMed:11327326","Unimod:53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:00446"}


id: PBO:0039172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 4","termid":"PBO:0039172"}


id: PBO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 1","termid":"PBO:0039520"}


id: PBO:0071542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 7","termid":"PBO:0071542"}


id: PBO:0075230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 5","termid":"PBO:0075230"}


id: PBO:0002533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA30 protein (predicted)","termid":"PBO:0002533"}


id: GO:0035444
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"}]},"cv_name":"biological_process","definition":"The directed movement of nickel (Ni) cations across a membrane by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transport","termid":"GO:0015675"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nickel cation transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nickel cation membrane transport","type":"exact"}],"termid":"GO:0035444","terms_by_termid":{"GO:0098716":null}}


id: PBO:0059367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B pseudogene 2","termid":"PBO:0059367"}


id: PBO:0067224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 293, pseudogene","termid":"PBO:0067224"}


id: PBO:0081464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 334","termid":"PBO:0081464"}


id: MONDO:0700009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 2 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 disorder","termid":"MONDO:0700009","xrefs":{"Monarch":{"xref_id":"0700009"}}}


id: PBO:0070935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 43","termid":"PBO:0070935"}


id: PATO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located far (not close to) in space in relation to another entity.","definition_xrefs":["PATOC:PM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far from","synonyms":[{"name":"distant from","type":"exact"},{"name":"remote from","type":"exact"}],"termid":"PATO:0002233"}


id: PBO:0027774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_viridicatumtoxin","termid":"PBO:0027774"}


id: PR:Q10287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bgs1 gene.","definition_xrefs":["UniProtKB:Q10287","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase component bgs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.05c","synonyms":[{"name":"1,3-beta-D-glucan-UDP glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bgs1","type":"exact"}],"termid":"PR:Q10287"}


id: GO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome.","definition_xrefs":["PMID:10358769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"phagocytic cup","termid":"GO:0001891"}


id: MONDO:1012169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lower motor neuron disease, non-human animal","termid":"MONDO:1011848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower motor neuron disease, pig","secondary_identifiers":["OMIA:000662-9823"],"termid":"MONDO:1012169","xrefs":{"Monarch":{"xref_id":"1012169"}}}


id: MONDO:1011457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, non-human animal","secondary_identifiers":["OMIA:000411"],"termid":"MONDO:1011457","xrefs":{"Monarch":{"xref_id":"1011457"}}}


id: GO:0071794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CAP-Gly domain of a protein. The CAP_Gly domain is a conserved, glycine-rich domain of about 42 residues found in some cytoskeleton-associated proteins, and features a novel protein fold containing three beta-sheets.","definition_xrefs":["InterPro:IPR000938","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CAP-Gly domain binding","termid":"GO:0071794"}


id: PBO:0086375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; similar to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086375"}


id: PBO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit Dpb3","termid":"PBO:0001504"}


id: PR:P78814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/arginine-rich splicing factor 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01831","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor srp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.02c","secondary_identifiers":["UniProtKB:P78814"],"synonyms":[{"name":"Spom972h-SRSF6","type":"exact"}],"termid":"PR:P78814"}


id: PBO:0091045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CwfJ family protein, splicing factor","termid":"PBO:0091045"}


id: GO:0035379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carbon dioxide (CO2) from one side of a membrane to the other.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"carbon dioxide transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-1247649","Reactome:R-HSA-1237069","Reactome:R-HSA-1247645","Reactome:R-HSA-1237042"],"termid":"GO:0035379"}


id: _global:regulates_transport_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a  process that regulates a transport process and the entity transported by that process.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_transport_of","secondary_identifiers":["RO:0002011"],"termid":"_global:regulates_transport_of"}


id: GO:0140847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that stops, prevents or reduces the transition from the initiation to the elongation phases of transcription by RNA polymerase II.","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of promoter clearance from RNA polymerase II promoter","termid":"GO:0140845"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"negatively_regulates","term_name":"RNA polymerase II promoter clearance","termid":"GO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of promoter clearance from RNA polymerase II promoter","termid":"GO:0140847"}


id: GO:0008271
data:
  {"annotated_genes":["SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109271],"is_not":false,"summary":null,"term":"GO:0008271"}]},"cv_name":"molecular_function","definition":"Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate transmembrane transporter activity","termid":"GO:0015116"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"secondary active sulfate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"secondary active sulphate transmembrane transporter activity","type":"exact"},{"name":"sulfate porter activity","type":"related"},{"name":"sulphate porter activity","type":"exact"}],"termid":"GO:0008271","terms_by_termid":{"GO:0008271":null}}


id: GO:0003947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + (N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide = UDP + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide.","definition_xrefs":["EC:2.4.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-8856223","RHEA:12588","MetaCyc:2.4.1.92-RXN"],"synonyms":[{"name":"GM2 synthase activity","type":"related"},{"name":"GM2/GD2-synthase activity","type":"related"},{"name":"GalNAc-T activity","type":"related"},{"name":"UDP acetylgalactosamine-(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:1-O-[O-(N-acetyl-alpha-neuraminosyl)-(2->3)-O-beta-D-galactopyranosyl-(1->4)-beta-D-glucopyranosyl]-ceramide 1,4-beta-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine GM3 N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"asialo-GM2 synthase activity","type":"related"},{"name":"beta-1,4N-aetylgalactosaminyltransferase activity","type":"related"},{"name":"ganglioside GM2 synthase activity","type":"related"},{"name":"ganglioside GM3 acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-acetylneuraminylgalactosylglucosylceramide acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-ganglioside GM3 acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-hematoside acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0003947"}


id: GO:1990175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EH domain of a protein. The EH stand for Eps15 homology. This was originally identified as a motif present in three copies at the NH2-termini of Eps15 and of the related molecule Eps15R.","definition_xrefs":["PMID:21115825","PMID:11911876","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"EH domain binding","termid":"GO:1990175"}


id: MONDO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"coronal synostosis, syndactyly and jejunal atresia","secondary_identifiers":["UMLS:C2931194","GARD:1532","MEDGEN:419740","MESH:C536445"],"synonyms":[{"name":"asymmetrical coronal synostosis, cutaneous syndactyly of the fingers and toes, and jejunal atresia","type":"related"}],"termid":"MONDO:0043083","xrefs":{"Monarch":{"xref_id":"0043083"}}}


id: MONDO:1010088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatomyositis characterized by the presence of anti-SAE autoantibodies.","definition_xrefs":["PMID:31279808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005093"],"is_obsolete":false,"name":"anti-SAE dermatomyositis","synonyms":[{"name":"anti-small ubiquitin-like modifier activating enzyme dermatomyositis","type":"exact"}],"termid":"MONDO:1010088","xrefs":{"Monarch":{"xref_id":"1010088"}}}


id: MONDO:0054697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 11b with atopic dermatitis","secondary_identifiers":["UMLS:C4539957","MEDGEN:1627819","OMIM:617638","DOID:0111958","NCIT:C176630"],"synonyms":[{"name":"IMD11B","type":"related"},{"name":"atopic dermatitis, elevated IgE, and eosinophilia","type":"related"},{"name":"immunodeficiency 11B with ATOPIC dermatitis","type":"related"}],"termid":"MONDO:0054697","xrefs":{"Monarch":{"xref_id":"0054697"}}}


id: MONDO:0859278
data:
  {"annotated_genes":["SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85091],"is_not":false,"summary":null,"term":"MONDO:0859278"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05194":null},"genotype_count":0,"is_obsolete":false,"name":"keratoderma-ichthyosis-deafness syndrome, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823973","UMLS:C5774200","OMIM:620009"],"termid":"MONDO:0859278","terms_by_termid":{"MONDO:0859278":null},"xrefs":{"Monarch":{"xref_id":"0859278"}}}


id: PATO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Recurrent and often more or less cyclic alteration.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant","termid":"PATO:0001227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluctuating","termid":"PATO:0002374"}


id: PBO:0013440
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses sty1delta sensitivity to UV","termid":"PBO:0013440"}


id: MONDO:0012090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 9p22-p21.","definition_xrefs":["PMID:12634859","DOID:0110570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 47","secondary_identifiers":["MESH:C563885","GARD:18126","MEDGEN:324838","OMIM:608652","UMLS:C1837609"],"synonyms":[{"name":"DFNA47","type":"narrow"},{"name":"autosomal dominant deafness 47","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 47","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 47","type":"narrow"},{"name":"deafness, autosomal dominant 47","type":"narrow"}],"termid":"MONDO:0012090","xrefs":{"Monarch":{"xref_id":"0012090"}}}


id: PBO:0075061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-24","termid":"PBO:0075061"}


id: MONDO:0005798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal disease in human immunodeficiency virus (HIV)-infected patients. It is characterized by nephrotic syndrome, azotemia, normal to large kidneys on ultrasound images, and focal segmental glomerulosclerosis on renal biopsy findings.","definition_xrefs":["NCIT:C26918"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"excluded_subClassOf","term_name":"HIV infectious disease","termid":"MONDO:0005109"},{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"},{"relation_name":"is_a","term_name":"AIDS-related disorder","termid":"MONDO:0024571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005046"],"is_obsolete":false,"name":"HIV-associated nephropathy","secondary_identifiers":["MEDGEN:37145","UMLS:C0078911","MESH:D016263","EFO:0007313"],"synonyms":[{"name":"AIDS-associated nephropathy","type":"exact"},{"name":"AIDS-related nephropathy","type":"exact"},{"name":"HIV nephropathy","type":"exact"},{"name":"HIVAN","type":"exact"}],"termid":"MONDO:0005798","xrefs":{"Monarch":{"xref_id":"0005798"}}}


id: PATO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A magnetism which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"magnetic","termid":"PATO:0001685"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased magnetism","synonyms":[{"name":"high magnetism","type":"exact"}],"termid":"PATO:0001683"}


id: PR:Q9HGM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX49 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04078","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.06c","secondary_identifiers":["UniProtKB:Q9HGM5"],"synonyms":[{"name":"Spom972h-DDX49","type":"exact"}],"termid":"PR:Q9HGM5"}


id: MONDO:0004148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraluminal papillary neoplasm, usually with high grade intraepithelial neoplasia, that arises from the gallbladder. It is associated with the presence of an invasive carcinoma. The carcinomatous component is usually an adenocarcinoma.","definition_xrefs":["NCIT:C5743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"gallbladder papillary neoplasm","termid":"MONDO:0002518"},{"relation_name":"is_a","term_name":"gallbladder adenocarcinoma","termid":"MONDO:0006215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder papillary neoplasm with an associated invasive carcinoma","secondary_identifiers":["DOID:7221","UMLS:C1333753","ICDO:8503/3","MEDGEN:232226"],"synonyms":[{"name":"gall bladder papillary carcinoma","type":"exact"},{"name":"gallbladder papillary carcinoma","type":"related"},{"name":"gallbladder papillary neoplasm with an associated invasive cancer","type":"exact"},{"name":"gallbladder papillary neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"intracystic papillary neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"papillary carcinoma of gallbladder","type":"exact"},{"name":"papillary carcinoma of the gallbladder","type":"exact"}],"termid":"MONDO:0004148","xrefs":{"Monarch":{"xref_id":"0004148"}}}


id: PBO:0056468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAST4 antisense RNA 1","termid":"PBO:0056468"}


id: GO:0034373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within an intermediate-density lipoprotein particle.","definition_xrefs":["GOC:expert_pt","GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle remodeling","termid":"GO:0034370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate-density lipoprotein particle remodeling","synonyms":[{"name":"IDL remodeling","type":"exact"},{"name":"IDL remodelling","type":"exact"},{"name":"intermediate-density lipoprotein particle formation","type":"related"},{"name":"intermediate-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034373"}


id: FYPO:0005492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of protein localization in vacuole does not occur, and some of the protein is secreted, i.e. a protein that normally resides in the vacuole is instead secreted.","definition_xrefs":["PMID:22484924","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished maintenance of protein localization in vacuole, with protein secreted","synonyms":[{"name":"abolished maintenance of protein localisation in vacuole, with protein secreted","type":"exact"},{"name":"abolished maintenance of protein localization in vacuole, with protein secreted, during mitotic cell cycle","type":"related"},{"name":"abolished maintenance of protein localization in vacuole, with protein secreted, during vegetative growth","type":"exact"},{"name":"maintenance of protein localization in vacuole abolished, with protein secreted","type":"exact"},{"name":"protein mislocalized from vacuole to extracellular region","type":"related"}],"termid":"FYPO:0005492"}


id: GO:0003270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling involved in heart development","termid":"GO:0061314"},{"relation_name":"part_of","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"Notch signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"related"},{"name":"Notch signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003270"}


id: PR:O13816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin subunit psc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.20","synonyms":[{"name":"SCC3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-psc3","type":"exact"}],"termid":"PR:O13816"}


id: GO:0120040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage proliferation.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"regulates","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage proliferation","termid":"GO:0120040"}


id: MONDO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the rectum. Representative examples include angiosarcoma, Kaposi sarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectum sarcoma","secondary_identifiers":["UMLS:C1335688","NCIT:C5548","MEDGEN:277577","DOID:1995"],"synonyms":[{"name":"rectal sarcoma","type":"exact"},{"name":"rectum sarcoma","type":"exact"},{"name":"sarcoma of rectum","type":"exact"},{"name":"sarcoma of the rectum","type":"exact"}],"termid":"MONDO:0002168","xrefs":{"Monarch":{"xref_id":"0002168"}}}


id: MONDO:0003922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the ovary. It is characterized by the presence of malignant epithelial cells with clear cytoplasm in a fibrotic stroma.","definition_xrefs":["NCIT:C40079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian clear cell cancer","termid":"MONDO:0000548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian clear cell malignant adenofibroma","secondary_identifiers":["ICDO:8313/3","UMLS:C2075522","DOID:6554","MEDGEN:384483"],"synonyms":[{"name":"ovarian clear cell adenocarcinofibroma","type":"exact"},{"name":"ovarian clear cell malignant adenofibroma","type":"exact"}],"termid":"MONDO:0003922","xrefs":{"Monarch":{"xref_id":"0003922"}}}


id: PBO:0058581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715a","termid":"PBO:0058581"}


id: GO:2000343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 2 production","termid":"GO:2000341"},{"relation_name":"positively_regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:1904209"],"synonyms":[{"name":"positive regulation of CCL2 secretion","type":"exact"},{"name":"positive regulation of CXCL2 production","type":"exact"},{"name":"positive regulation of MIP-2 production","type":"exact"},{"name":"positive regulation of MIP2 production","type":"exact"},{"name":"positive regulation of SCYB2 production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000343"}


id: PBO:0080300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 64 pseudogene","termid":"PBO:0080300"}


id: MONDO:0009563
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  {"annotated_genes":["SJAG_03290","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[84438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"}]},"cv_name":"mondo","definition":"An autosomal recessive inherited disorder caused by mutations in the BCKDHA, BCKDHB, DBT, and DLD genes. It is characterized by a deficiency of branched-chain alpha-keto acid dehydrogenase complex, leading to accumulation of metabolites in the body fluids. The name of the disease derives from the sweet odor of the urine in infants, reminiscent of maple syrup. Signs and symptoms usually appear in infancy and include lethargy and developmental delays. If untreated, it may lead to seizures, coma, and death.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn organic aciduria","termid":"MONDO:0000688"},{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02433":null,"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"maple syrup urine disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C34806","ICD10CM:E71.0","NORD:1400","Orphanet:511","MESH:D008375","NANDO:1200791","GARD:3228","MedDRA:10026817","UMLS:C0024776","SCTID:27718001","NANDO:2200473","DOID:9269","icd11.foundation:1623706568","MEDGEN:6217","OMIMPS:248600"],"synonyms":[{"name":"BCKD deficiency","type":"exact"},{"name":"BCKDH deficiency","type":"exact"},{"name":"Keto acid decarboxylase deficiency","type":"related"},{"name":"Ketoacidaemia","type":"exact"},{"name":"MSUD","type":"exact"},{"name":"branched chain ketoaciduria","type":"exact"},{"name":"branched-chain 2-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"branched-chain Alpha-Keto acid dehydrogenase deficiency","type":"related"},{"name":"branched-chain ketoaciduria","type":"exact"},{"name":"dihydrolipoamide dehydrogenase deficiency","type":"related"},{"name":"maple syrup urine disease","type":"exact"},{"name":"maple syrup urine disease, Intermediate","type":"related"},{"name":"maple syrup urine disease, classic","type":"related"},{"name":"maple syrup urine disease, intermittent","type":"related"},{"name":"maple syrup urine disease, thiamine-responsive","type":"related"},{"name":"maple syrup urine disease, type 1A","type":"narrow"},{"name":"maple syrup urine disease, type 1B","type":"narrow"},{"name":"maple syrup urine disease, type 2","type":"narrow"}],"termid":"MONDO:0009563","terms_by_termid":{"MONDO:0009529":null,"MONDO:0014057":null},"xrefs":{"Monarch":{"xref_id":"0009563"}}}


id: FYPO:0002945
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id: PBO:0086763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; S288C contains an in-frame stop codon between ORFs YLR030W and YLR031W; YLR031W has a paralog, YMR124W, that arose from the whole genome duplication","termid":"PBO:0086763"}


id: MONDO:0016681
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare histological variant of glioblastoma (WHO grade IV) characterized by a biphasic tissue pattern with alternating areas displaying glial and mesenchymal differentiation (WHO).","definition_xrefs":["NCIT:C3796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain glioblastoma","termid":"MONDO:0002501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gliosarcoma","secondary_identifiers":["ICDO:9442/3","DOID:3071","ONCOTREE:GSARC","GARD:5653","Orphanet:251576","UMLS:C0206726","MESH:D018316","MedDRA:10018340","EFO:1001465","MEDGEN:64638"],"synonyms":[{"name":"glioblastoma with a sarcomatous component","type":"exact"},{"name":"glioblastoma with sarcomatous component","type":"exact"},{"name":"gliosarcoma","type":"exact"},{"name":"sarcomatous glioblastoma","type":"related"}],"termid":"MONDO:0016681","xrefs":{"Monarch":{"xref_id":"0016681"}}}


id: GO:0042643
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The actin part of any complex of actin, myosin, and accessory proteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete actomyosin, actin portion (obsolete GO:0042643)","termid":"GO:0042643"}


id: PBO:0045783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDAR associated via death domain","termid":"PBO:0045783"}


id: PBO:0044681
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 4","termid":"PBO:0044681"}


id: GO:0019630
data:
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id: PBO:0080687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIZ pseudogene 1","termid":"PBO:0080687"}


id: GO:0010646
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id: GO:0050484
data:
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id: GO:0003852
data:
  {"annotated_genes":["SJAG_02841"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109227],"is_not":false,"summary":null,"term":"GO:0003852"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-2-oxobutanoate + acetyl-CoA + H2O = (2S)-2-isopropylmalate + CoA + H+.","definition_xrefs":["RHEA:21524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"2-isopropylmalate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01213","EC:2.3.3.13","MetaCyc:2-ISOPROPYLMALATESYN-RXN"],"synonyms":[{"name":"3-carboxy-3-hydroxy-4-methylpentanoate 3-methyl-2-oxobutanoate-lyase (CoA-acetylating) activity","type":"related"},{"name":"acetyl-CoA:3-methyl-2-oxobutanoate C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"alpha-IPM synthetase activity","type":"related"},{"name":"alpha-isopropylmalate synthase activity","type":"related"},{"name":"alpha-isopropylmalate synthetase activity","type":"related"},{"name":"alpha-isopropylmalic synthetase activity","type":"related"},{"name":"isopropylmalate synthase activity","type":"related"},{"name":"isopropylmalate synthetase activity","type":"related"}],"termid":"GO:0003852","terms_by_termid":{"GO:0003852":null}}


id: GO:0018510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrophloroglucinol + NADP+ = H+ + NADPH + phloroglucinol.","definition_xrefs":["EC:1.3.1.57","RHEA:10080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phloroglucinol reductase activity","secondary_identifiers":["MetaCyc:R5-RXN","UM-BBD_reactionID:r0007","KEGG_REACTION:R05308"],"synonyms":[{"name":"dihydrophloroglucinol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0018510"}


id: PATO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality inhering in a bearer by virtue of the bearer's lacking focus.","definition_xrefs":["PATOC:NC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focus","termid":"PATO:0001516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blurry","termid":"PATO:0001518"}


id: GO:0141192
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96204],"is_not":false,"summary":null,"term":"GO:0141192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + H+ = diphosphate + P(1),P(4)-bis(5'-adenosyl)tetraphosphate.","definition_xrefs":["PMID:19710017","PMID:16884494","RHEA:34935","PMID:27398309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"ATP:ATP adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9825790"],"synonyms":[{"name":"adenine triphosphate adenylyltransferase activity","type":"related"}],"termid":"GO:0141192","terms_by_termid":{"GO:0141192":null}}


id: PBO:0063009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b catalytic subunit 3","termid":"PBO:0063009"}


id: PBO:0080852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YdjC chitooligosaccharide deacetylase homolog","termid":"PBO:0080852"}


id: GO:0031625
data:
  {"annotated_genes":["SJAG_03575","SJAG_00452","SJAG_01365","SJAG_00615","SJAG_04335","SJAG_01134","SJAG_01686","SJAG_03643","SJAG_01540","SJAG_02591","SJAG_00803","SJAG_02253","SJAG_01226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66741,69750,71208,72107,74208,75160,76132,77756,78312,78461,78579,78930,79568],"is_not":false,"summary":null,"term":"GO:0031625"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin protein ligase enzyme, any of the E3 proteins.","definition_xrefs":["GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase binding","termid":"GO:0044389"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_00803":null,"SJAG_01134":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_01540":null,"SJAG_01686":null,"SJAG_02253":null,"SJAG_02591":null,"SJAG_03575":null,"SJAG_03643":null,"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ubiquitin protein ligase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"ubiquitin ligase binding","type":"exact"}],"termid":"GO:0031625","terms_by_termid":{"GO:0031625":null}}


id: PBO:0088087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose-4-epimerase; catalyzes interconversion of UDP-galactose and UDP-D-glucose in galactose metabolism; also catalyzes conversion of alpha-D-glucose or alpha-D-galactose to their beta-anomers; human homolog GALE implicated in galactosemia, can complement yeast null mutant","termid":"PBO:0088087"}


id: PBO:0110102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc chaperone Zng1, possible chaperone for mitochondrial zinc containing proteins","termid":"PBO:0110102"}


id: PBO:0110328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD36 pseudogene 2","termid":"PBO:0110328"}


id: PBO:0069469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 735, pseudogene","termid":"PBO:0069469"}


id: MONDO:0015253
data:
  {"annotated_genes":["SJAG_02585","SJAG_00921","SJAG_04168","SJAG_02280","SJAG_04695","SJAG_02894","SJAG_04414","SJAG_02358","SJAG_00749","SJAG_02597","SJAG_02749","SJAG_03335","SJAG_03254","SJAG_01621","SJAG_02335","SJAG_04746","SJAG_03919","SJAG_03762","SJAG_01296","SJAG_00468","SJAG_02340","SJAG_00166","SJAG_01366","SJAG_01568","SJAG_04478","SJAG_01588","SJAG_00465","SJAG_02046","SJAG_02904","SJAG_02802","SJAG_04066","SJAG_01512","SJAG_04204"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84745,84746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007110"},{"annotations":[85518,85519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013217"},{"annotations":[86408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013964"},{"annotations":[85042,85043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014245"},{"annotations":[85618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014394"},{"annotations":[84554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010493"},{"annotations":[85648,85647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011639"},{"annotations":[86042,86043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044309"},{"annotations":[86046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044310"},{"annotations":[85276,85277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032668"},{"annotations":[85278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032669"},{"annotations":[85280,85281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032670"},{"annotations":[84997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031071"},{"annotations":[85076,85077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012529"},{"annotations":[85980,85981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012924"},{"annotations":[85979,85978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012925"},{"annotations":[85996,85997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012937"},{"annotations":[85995,85994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012938"},{"annotations":[85998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012939"},{"annotations":[85520,85521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013216"}]},"cv_name":"mondo","definition":"A congenital aregenerative and often macrocytic anemia with erythroblastopenia.","definition_xrefs":["Orphanet:124"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete Mendelian syndromes with cleft lip/palate (obsolete MONDO:0015335)","termid":"MONDO:0015335"},{"relation_name":"excluded_subClassOf","term_name":"obsolete polymalformative genetic syndrome with increased risk of developing cancer (obsolete MONDO:0015945)","termid":"MONDO:0015945"},{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"},{"relation_name":"is_a","term_name":"pure red-cell aplasia","termid":"MONDO:0001705"},{"relation_name":"is_a","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00749":null,"SJAG_00921":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01512":null,"SJAG_01568":null,"SJAG_01588":null,"SJAG_01621":null,"SJAG_02046":null,"SJAG_02280":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02585":null,"SJAG_02597":null,"SJAG_02749":null,"SJAG_02802":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03254":null,"SJAG_03335":null,"SJAG_03762":null,"SJAG_03919":null,"SJAG_04066":null,"SJAG_04168":null,"SJAG_04204":null,"SJAG_04414":null,"SJAG_04478":null,"SJAG_04695":null,"SJAG_04746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:1339","OMIMPS:105650","MEDGEN:266045","GARD:6274","SCTID:88854002","MESH:D029503","NORD:773","NCIT:C61236","MedDRA:10062989","NANDO:1200890","UMLS:C1260899","NANDO:2200614"],"synonyms":[{"name":"Aase syndrome","type":"exact"},{"name":"Aase-Smith II syndrome","type":"exact"},{"name":"BDS","type":"related"},{"name":"Blackfan - Diamond syndrome","type":"exact"},{"name":"Blackfan Diamond syndrome","type":"related"},{"name":"Blackfan-Diamond anaemia","type":"exact"},{"name":"Blackfan-Diamond anemia","type":"exact"},{"name":"DBA","type":"exact"},{"name":"Diamond Blackfan Anemia","type":"exact"},{"name":"Diamond-Blackfan anemia","type":"exact"},{"name":"Red cell aplasia, pure hereditary","type":"related"},{"name":"anaemia Diamond Blackfan type","type":"related"},{"name":"anaemia congenital erythroid hypoplastic","type":"related"},{"name":"anemia Diamond Blackfan type","type":"related"},{"name":"anemia congenital erythroid hypoplastic","type":"related"},{"name":"aregenerative anaemia chronic congenital","type":"related"},{"name":"aregenerative anemia chronic congenital","type":"related"},{"name":"chronic constitutional pure red cell anaemia","type":"exact"},{"name":"chronic constitutional pure red cell anemia","type":"exact"},{"name":"congenital PRCA","type":"exact"},{"name":"congenital hypoplastic anaemia","type":"exact"},{"name":"congenital hypoplastic anemia","type":"exact"},{"name":"congenital hypoplastic anemia, Blackfan-Diamond type","type":"exact"},{"name":"congenital pure red cell aplasia","type":"exact"},{"name":"erythrogenesis imperfecta","type":"exact"},{"name":"inherited erythroblastopenia","type":"exact"}],"termid":"MONDO:0015253","terms_by_termid":{"MONDO:0007110":null,"MONDO:0010493":null,"MONDO:0011639":null,"MONDO:0012529":null,"MONDO:0012924":null,"MONDO:0012925":null,"MONDO:0012937":null,"MONDO:0012938":null,"MONDO:0012939":null,"MONDO:0013216":null,"MONDO:0013217":null,"MONDO:0013964":null,"MONDO:0014245":null,"MONDO:0014394":null,"MONDO:0031071":null,"MONDO:0032668":null,"MONDO:0032669":null,"MONDO:0032670":null,"MONDO:0044309":null,"MONDO:0044310":null},"xrefs":{"Monarch":{"xref_id":"0015253"}}}


id: GO:0033300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of dehydroascorbate, 5-(1,2-dihydroxyethyl)furan-2,3,4(5H)-trione, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"dehydroascorbic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-198818"],"synonyms":[{"name":"dehydroascorbate transporter activity","type":"exact"},{"name":"dehydroascorbic acid transporter activity","type":"related"}],"termid":"GO:0033300"}


id: GO:0046285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid phytoalexin metabolic process","synonyms":[{"name":"flavonoid phytoalexin metabolism","type":"exact"}],"termid":"GO:0046285"}


id: PBO:0045078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP4 antisense RNA 1","termid":"PBO:0045078"}


id: PBO:0065208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF39 divergent transcript","termid":"PBO:0065208"}


id: PR:Q9UTC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6 small nuclear ribonucleoprotein Prp4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19846:SF0","PRO:DNx","OMA:SCHPO00203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C227.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.12","secondary_identifiers":["UniProtKB:Q9UTC7"],"synonyms":[{"name":"Spom972h-PRPF4","type":"exact"}],"termid":"PR:Q9UTC7"}


id: PBO:0080285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 48 pseudogene","termid":"PBO:0080285"}


