# terms

id: PBO:0083518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MRM1/YOR201c","termid":"PBO:0083518"}


id: PBO:0017644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex assembly protein Mba1 (predicted)","termid":"PBO:0017644"}


id: GO:2000214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of proline metabolic process","synonyms":[{"name":"regulation of proline metabolism","type":"exact"}],"termid":"GO:2000214"}


id: GO:0102960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-9beta-pimara-7,15-diene-19,6beta-olide + NAD(P) = momilactone A + H+ + NAD(P)H.","definition_xrefs":["RHEA:25367","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"momilactone-A synthase activity","secondary_identifiers":["MetaCyc:RXN-9290","EC:1.1.1.295"],"termid":"GO:0102960"}


id: PBO:0054767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2179","termid":"PBO:0054767"}


id: PBO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR101","termid":"PBO:0001730"}


id: PBO:0070440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase A","termid":"PBO:0070440"}


id: PBO:0074490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snail family zinc finger 1 pseudogene 1","termid":"PBO:0074490"}


id: PBO:0000935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic ester hydrolase activity (predicted)","termid":"PBO:0000935"}


id: FYPO:0008275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a polyphosphatase activity is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal polyphosphatase activity","termid":"FYPO:0008275"}


id: GO:0034384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"high-density lipoprotein particle clearance","synonyms":[{"name":"HDL clearance","type":"exact"}],"termid":"GO:0034384"}


id: PBO:0034783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex synviolin family ubiquitin-protein ligase E3 subunit, Hrd1","termid":"PBO:0034783"}


id: MONDO:0003588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant adipose tissue neoplasm of the larynx. It predominantly affects males. Clinical presentation includes dysphonia, dysphagia and respiratory symptoms. The supraglottis is the most common site of involvement.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal sarcoma","termid":"MONDO:0002448"},{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"larynx liposarcoma","secondary_identifiers":["NCIT:C6021","UMLS:C1334372","MEDGEN:235252","DOID:5696"],"synonyms":[{"name":"laryngeal liposarcoma","type":"exact"},{"name":"larynx liposarcoma","type":"exact"},{"name":"lip larynx sarcoma","type":"exact"},{"name":"liposarcoma of larynx","type":"exact"},{"name":"liposarcoma of the larynx","type":"exact"}],"termid":"MONDO:0003588","xrefs":{"Monarch":{"xref_id":"0003588"}}}


id: MONDO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A factitious disorder that involves a care giver's deliberate exaggeration, fabrication, and/or induce physical, psychological, behavioral, and/or mental health problems in others.","definition_xrefs":["DOID:0060045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factitious disorder","termid":"MONDO:0002103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Munchausen by proxy","secondary_identifiers":["MEDGEN:88372","SCTID:95637005","MESH:D016735","UMLS:C0085277"],"synonyms":[{"name":"Munchausen by proxy syndrome","type":"exact"},{"name":"Munchausen syndrome by proxy","type":"exact"}],"termid":"MONDO:0000597","xrefs":{"Monarch":{"xref_id":"0000597"}}}


id: PBO:0002801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein, G-pathc domain, PINX1 family (predicted)","termid":"PBO:0002801"}


id: PBO:0001059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor beta subunit Srp102 (predicted)","termid":"PBO:0001059"}


id: PBO:0062811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 2","termid":"PBO:0062811"}


id: PBO:0004736
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.17","termid":"PBO:0004736"}


id: PBO:0075908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13 Hsp70 interacting protein","termid":"PBO:0075908"}


id: GO:0004098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a cerebroside 3-sulfate + H2O = a cerebroside + sulfate.","definition_xrefs":["EC:3.1.6.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cerebroside-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-9840949","RHEA:21300","MetaCyc:CEREBROSIDE-SULFATASE-RXN","Reactome:R-HSA-1606807"],"synonyms":[{"name":"arylsulfatase A activity","type":"related"},{"name":"cerebroside sulfate sulfatase activity","type":"related"},{"name":"cerebroside-3-sulfate 3-sulfohydrolase activity","type":"related"},{"name":"cerebroside-sulphatase activity","type":"exact"}],"termid":"GO:0004098"}


id: MONDO:0958347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysraphic abnormality characterized by the infiltration of fatty tissue localized in the filum terminale, thickens and loses its flexibility, with normal conus shape, regardless of conus level. There is no other spinal cord malformation associated, but it can be associated with extraspinal malformation (ex: anorectal malformation) or syndromic situation.","definition_xrefs":["Orphanet:645325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphic spinal cord lipoma","termid":"MONDO:0958260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated filum lipoma","secondary_identifiers":["MEDGEN:1853135","UMLS:C5816720"],"termid":"MONDO:0958347","xrefs":{"Monarch":{"xref_id":"0958347"}}}


id: GO:0097029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which antigen-activated dendritic cells acquire the specialized features of a mature conventional dendritic cell. Mature conventional dendritic cells upregulate the surface expression of MHC molecules, chemokine receptors and adhesion molecules, and increase the number of dendrites (cytoplasmic protrusions) in preparation for migration to lymphoid organs where they present antigen to T cells.","definition_xrefs":["GOC:BHF","PMID:15845453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature conventional dendritic cell differentiation","termid":"GO:0097029"}


id: PBO:0077413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 150A","termid":"PBO:0077413"}


id: MONDO:0007316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arnold-Chiari malformation type I is a central nervous system malformation characterized by caudal displacement of the cerebellar tonsils exceeding 5mm below the foramen magnum with or without syringomyelia. Symptoms vary in onset and severity and include suboccipital headache, neck pain, vertigo, tinnitus, ocular symptoms (diplopia, blurred vision, photofobia, nystagmus), lower cranial nerve signs, cerebellar ataxia, and spasticity. Some affected individuals can be asymptomatic.","definition_xrefs":["Orphanet:268882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chiari malformation","termid":"MONDO:0000115"},{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Chiari malformation type I","secondary_identifiers":["MedDRA:10056944","MEDGEN:196689","GARD:9233","icd11.foundation:1383121646","SCTID:253185002","UMLS:C0750929","OMIM:118420"],"synonyms":[{"name":"Arnold-Chiari malformation type 1","type":"exact"},{"name":"Arnold-Chiari malformation type I","type":"exact"},{"name":"Chiari malformation type 1","type":"exact"},{"name":"Chiari malformation type 1 with syringomyelia","type":"related"},{"name":"Chiari malformation type I","type":"exact"},{"name":"Cm1","type":"related"},{"name":"Cm1 with syringomyelia","type":"related"}],"termid":"MONDO:0007316","xrefs":{"Monarch":{"xref_id":"0007316"}}}


id: PBO:0058285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4661","termid":"PBO:0058285"}


id: MONDO:0009463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal carotid arteries, hypoplasia of","secondary_identifiers":["OMIM:243100","UMLS:C1855736","MEDGEN:383757"],"synonyms":[{"name":"internal carotid arteries, hypoplasia of","type":"exact"}],"termid":"MONDO:0009463","xrefs":{"Monarch":{"xref_id":"0009463"}}}


id: PBO:0069087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 334, pseudogene","termid":"PBO:0069087"}


id: PBO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT2 subfamily","termid":"PBO:0001990"}


id: PBO:0069805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1091, pseudogene","termid":"PBO:0069805"}


id: PBO:0078275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-3","termid":"PBO:0078275"}


id: MONDO:0016079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic Creutzfeldt-Jakob disease (sCJD) is a subacute fatal neurodegenerative disease belonging to the group of prion diseases, characterized by a clinical triad of dementia, myoclonus, and EEG anomalies, along with neuropathological evidence of neuronal loss, spongiform changes, and astrocytosis. There are three types of CJD: sporadicCJD (sCJD), inherited CJD, and iatrogenic and variant CJD (vCJD).","definition_xrefs":["Orphanet:204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited Creutzfeldt-Jakob disease","termid":"MONDO:0007403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"sporadic Creutzfeldt-Jakob disease","secondary_identifiers":["SCTID:713060000","NANDO:1200187","GARD:6956","MEDGEN:377682","ICD9:046.19","UMLS:C1852467","icd11.foundation:1553463690","MedDRA:10011384"],"synonyms":[{"name":"sporadic CJD","type":"exact"}],"termid":"MONDO:0016079","xrefs":{"Monarch":{"xref_id":"0016079"}}}


id: PBO:0063996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 30","termid":"PBO:0063996"}


id: PBO:0047505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fer-1 like family member 6","termid":"PBO:0047505"}


id: GO:0022021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of caudal ganglionic eminence cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal ganglionic eminence cell proliferation","termid":"GO:0022021"}


id: PBO:0079287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 6","termid":"PBO:0079287"}


id: PBO:0054641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2046","termid":"PBO:0054641"}


id: GO:0019640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-glucuronate into D-xylulose 5-phosphate.","definition_xrefs":["GOC:go_curators","PMID:27189775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucuronate catabolic process","termid":"GO:0042840"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate biosynthetic process","termid":"GO:1901159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"D-glucuronate catabolic process to D-xylulose 5-phosphate","synonyms":[{"name":"glucuronate breakdown to xylulose 5-phosphate","type":"exact"},{"name":"glucuronate catabolic process to xylulose 5-phosphate","type":"exact"},{"name":"glucuronate degradation to xylulose 5-phosphate","type":"exact"}],"termid":"GO:0019640"}


id: GO:0035480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Notch signaling pathway involved in heart induction (obsolete GO:0035480)","synonyms":[{"name":"regulation of Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0035480"}


id: PBO:0090614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephospho-CoA kinase","termid":"PBO:0090614"}


id: MONDO:0014599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the COL4A3BP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 34","secondary_identifiers":["OMIM:616351","UMLS:C4225156","DOID:0070064","MEDGEN:907277"],"synonyms":[{"name":"COL4A3BP autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD34","type":"exact"},{"name":"autosomal dominant intellectual disability 34","type":"exact"},{"name":"autosomal dominant mental retardation 34","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 34","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in COL4A3BP","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 34","type":"exact"},{"name":"intellectual disability, autosomal dominant 34","type":"exact"},{"name":"intellectual disability, autosomal dominant type 34","type":"exact"},{"name":"mental retardation, autosomal dominant 34","type":"related"},{"name":"mental retardation, autosomal dominant type 34","type":"exact"}],"termid":"MONDO:0014599","xrefs":{"Monarch":{"xref_id":"0014599"}}}


id: GO:0070727
data:
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id: PBO:0048258
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id: GO:0045176
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id: GO:1901976
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id: GO:0030367
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id: GO:0098030
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id: PBO:0056404
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id: PBO:0064626
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id: PBO:0057796
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id: PBO:0034269
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id: MONDO:0012455
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id: PBO:0063456
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id: GO:0044178
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id: PBO:0043746
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id: MONDO:0020571
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id: FYPO:0005658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is abnormal.","definition_xrefs":["PomBase:mah","PMID:25414342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"abnormal frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"abnormal levels of meiotic crossover associated with a gene conversion event","type":"exact"}],"termid":"FYPO:0005658"}


id: PBO:0089996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase, e2 component of oxoglutarate dehydrogenase complex Kdg2","termid":"PBO:0089996"}


id: PBO:0003403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex16 family peroxisome import protein (predicted)","termid":"PBO:0003403"}


id: MOD:01783
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N,N-dimethyl-L-serine.","definition_xrefs":["PubMed:20668449","RESID:AA0534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"},{"relation_name":"is_a","term_name":"N-methylated serine","termid":"MOD:01800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-serine","synonyms":[{"name":"(2S)-2-(dimethylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylserine","type":"exact"},{"name":"N,N-dimethyl-L-serine","type":"exact"},{"name":"N,N-dimethylserine","type":"exact"}],"termid":"MOD:01783"}


id: PBO:0112993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenosine 5'-monophosphoramidase; interacts physically and genetically with CDK and TFIIK subunit Kin28p, and genetically with CAK1; member of histidine triad (HIT) superfamily of nucleotide-binding proteins; protein abundance increases in response to DNA replication stress; human homolog HINT1 can complement yeast hnt1 mutant","termid":"PBO:0112993"}


id: PBO:0045142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 11","termid":"PBO:0045142"}


id: PBO:0049064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 79, pseudogene","termid":"PBO:0049064"}


id: FYECO:0000168
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown at a high temperature. This is followed by a heat shock where the temperature is increased to a higher temperature, followed by recovery at the initial temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping heat shock","termid":"FYECO:0000116"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock and recovery at high temperature","synonyms":[{"name":"heat shock for 20-30 min at 48 degrees C, preceeded and followed by growth at high temperature","type":"narrow"}],"termid":"FYECO:0000168"}


id: GO:2001088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a trisaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"trisaccharide transport","termid":"GO:2001088"}


id: GO:1900019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein kinase C activity.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein kinase C activity","synonyms":[{"name":"regulation of PKC","type":"related"},{"name":"regulation of PKC activity","type":"exact"}],"termid":"GO:1900019"}


id: PBO:0065253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20F, pseudogene","termid":"PBO:0065253"}


id: PBO:0057844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3157","termid":"PBO:0057844"}


id: GO:0061604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [Molybdopterin-synthase sulfur-carrier protein]-Gly-Gly-AMP + [cysteine desulfurase]-S-sulfanyl-L-cysteine = AMP [molybdopterin-synthase sulfur-carrier protein]-Gly-NH-CH(2)-C(O)SH + cysteine desulfurase.","definition_xrefs":["PMID:22370186","EC:2.8.1.11","GOC:dph","PMID:18154309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"molybdopterin-synthase sulfurtransferase activity","secondary_identifiers":["RHEA:48612"],"termid":"GO:0061604"}


id: PBO:0088763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase","termid":"PBO:0088763"}


id: PBO:0075509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2","termid":"PBO:0075509"}


id: GO:0140381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine (SAM) + 4-hydroxytryptamine 4-phosphate (norbaeocystin) = 2 S-adenosyl-L-homocysteine + psilocybin.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"4-hydroxytryptamine 4-phosphate methyltransferase activity","secondary_identifiers":["EC:2.1.1.345","RHEA:55568"],"synonyms":[{"name":"norbaeocystin methyltransferase","type":"exact"},{"name":"psilocybin synthase","type":"exact"}],"termid":"GO:0140381"}


id: GO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein contributing to antigen processing and presentation.","definition_xrefs":["PMID:15771591","ISBN:0781735149","GOC:add","PMID:15224092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}


id: GO:0072294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the connecting tubule of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of connecting tubule identity","termid":"GO:0072085"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric connecting tubule development","termid":"GO:0072286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric connecting tubule identity","termid":"GO:0072294"}


id: PBO:0090894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Rho1 Rgf2","termid":"PBO:0090894"}


id: MONDO:0010033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized peeling skin syndrome (PSS) is a form of PSS presenting with a generalized distribution. It comprises two sub-types: the non-inflammatory (PSS type A) and the inflammatory (PSS type B) form. PSS type A is characterized by generalized white scaling with superficial peeling of the skin, while PSS type B is characterized by superficial patchy peeling of the entire skin with underlying erythroderma, associated with pruritus, and atopy.","definition_xrefs":["Orphanet:263543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peeling skin syndrome","termid":"MONDO:0019347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"generalized peeling skin syndrome","secondary_identifiers":["SCTID:718749004","MEDGEN:930825","UMLS:C4305156","GARD:12862"],"synonyms":[{"name":"PSS1","type":"related"},{"name":"generalised PSS","type":"exact"},{"name":"generalised deciduous skin","type":"exact"},{"name":"generalized PSS","type":"exact"},{"name":"generalized deciduous skin","type":"exact"},{"name":"peeling skin syndrome 1","type":"related"},{"name":"peeling skin syndrome type 1","type":"exact"}],"termid":"MONDO:0010033","xrefs":{"Monarch":{"xref_id":"0010033"}}}


id: GO:0018204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-leucine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-leucine modification","termid":"GO:0018204"}


id: PBO:0081371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 209, pseudogene","termid":"PBO:0081371"}


id: PR:P87120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease P protein subunit p30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00574","PRO:DNx","PANTHER:PTHR13031:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.04c","secondary_identifiers":["UniProtKB:P87120"],"synonyms":[{"name":"Spom972h-RPP30","type":"exact"}],"termid":"PR:P87120"}


id: MONDO:0011723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemifacial myohyperplasia (HMH) is a developmental disorder that frequently affects the right side of the face and is commonly seen in males. On the affected side of the face, there are usually enlarged tissues that lead to an abnormal jaw shape. Other features associated with HMH include enlargement of the brain, epilepsy, strabismus, genitourinary system disorders, intellectual disability, and dilation of the pupil on the affected side. Asymmetry of the face is more noticeable with age and remains until the end of adolescence when the asymmetry stabilizes. The cause of HMH is unknown; but theories suggest an imbalance in the endocrine system, neuronal abnormalities, chromosomal abnormalities, random events in twinning and fetal development, and vascular or lymphatic abnormalities.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"macroglossia","termid":"MONDO:0015496"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemifacial myohyperplasia","secondary_identifiers":["SCTID:699420006","MEDGEN:339781","UMLS:C1847521","Orphanet:141148","GARD:10084","MESH:C535862","OMIM:606773","ICD9:744.89","icd11.foundation:1338941880"],"synonyms":[{"name":"HMH","type":"related"},{"name":"hemifacial myohyperplasia","type":"exact"},{"name":"hypertrophy and asymmetry of the facial muscles","type":"related"}],"termid":"MONDO:0011723","xrefs":{"Monarch":{"xref_id":"0011723"}}}


id: PBO:0062541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily H member 1 pseudogene","termid":"PBO:0062541"}


id: FYPO:0005862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which MTREC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:26942678","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"abolished MTREC complex binding","synonyms":[{"name":"MTREC complex binding abolished","type":"exact"},{"name":"abolished NURS complex binding","type":"exact"}],"termid":"FYPO:0005862"}


id: RO:0002485
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receives_input_from","termid":"RO:0002485"}


id: MONDO:0020087
data:
  {"annotated_genes":["SJAG_01957","SJAG_01537","SJAG_00946","SJAG_03396","SJAG_04934"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012071"},{"annotations":[84321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010020"},{"annotations":[85338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958023"},{"annotations":[85870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012074"},{"annotations":[85506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014402"},{"annotations":[85390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009910"}]},"cv_name":"mondo","definition":"An instance of lipodystrophy that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00946":null,"SJAG_01537":null,"SJAG_01957":null,"SJAG_03396":null,"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"hereditary lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1383706","Orphanet:98305","GARD:12597","icd11.foundation:1166232738","UMLS:C4511302","SCTID:724841000"],"synonyms":[{"name":"genetic lipodystrophy","type":"exact"},{"name":"genetic lipodystrophy (disease)","type":"exact"}],"termid":"MONDO:0020087","terms_by_termid":{"MONDO:0009910":null,"MONDO:0010020":null,"MONDO:0012071":null,"MONDO:0012074":null,"MONDO:0014402":null,"MONDO:0958023":null},"xrefs":{"Monarch":{"xref_id":"0020087"}}}


id: MONDO:0017286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"TEMPI syndrome is a rare multi-systemic disease characterized by the presence of Telangiectasias, Erythrocytosis with elevated erythropoietin levels, Monoclonal gammopathy, Perinephric-fluid collections, and Intrapulmonary shunting.","definition_xrefs":["Orphanet:284227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"tempi syndrome","secondary_identifiers":["GARD:10962","SCTID:718614004","MEDGEN:886502","NCIT:C121656","UMLS:C3854394"],"synonyms":[{"name":"telangiectasia - erythrocytosis - monoclonal gammopathy - perinephric-fluid collections - intrapulmonary shunting","type":"related"},{"name":"telangiectasia-erythrocytosis-monoclonal gammopathy-perinephric-fluid collections-intrapulmonary shunting syndrome","type":"exact"}],"termid":"MONDO:0017286","xrefs":{"Monarch":{"xref_id":"0017286"}}}


id: PBO:0004082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis (predicted)","termid":"PBO:0004082"}


id: PBO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21 (predicted)","termid":"PBO:0002037"}


id: GO:0016768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethioninamine + spermidine = 5'-methylthioadenosine + spermine.","definition_xrefs":["EC:2.5.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"spermine synthase activity","secondary_identifiers":["MetaCyc:SPERMINE-SYNTHASE-RXN","RHEA:19973","Reactome:R-HSA-351210"],"synonyms":[{"name":"S-adenosylmethioninamine:spermidine 3-aminopropyltransferase activity","type":"related"},{"name":"spermidine aminopropyltransferase activity","type":"related"},{"name":"spermine synthetase activity","type":"related"}],"termid":"GO:0016768"}


id: PBO:0058044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4265","termid":"PBO:0058044"}


id: FYPO:0006219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is cell population growth is normal (i.e. indistinguishable from wild type) under conditions of potassium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal cell population growth during potassium ion starvation","synonyms":[{"name":"normal cell population growth during potassium ion depletion","type":"exact"},{"name":"normal cell population growth during potassium ion deprivation","type":"exact"},{"name":"normal cell population growth during potassium starvation","type":"exact"},{"name":"normal cell population growth in response to potassium ion starvation","type":"exact"},{"name":"normal vegetative cell population growth during potassium ion starvation","type":"exact"}],"termid":"FYPO:0006219"}


id: PBO:0046678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETAA1 activator of ATR kinase","termid":"PBO:0046678"}


id: PBO:0072224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 7","termid":"PBO:0072224"}


id: PBO:0050177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 4","termid":"PBO:0050177"}


id: PBO:0091372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER zinc importer, CDF family, Zhf1","termid":"PBO:0091372"}


id: GO:0007118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth at the tip of a bud, in a cell that reproduces by budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"budding cell bud growth","termid":"GO:0007117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell apical bud growth","synonyms":[{"name":"apical bud growth","type":"broad"}],"termid":"GO:0007118"}


id: MONDO:0019689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete perlecan-related bone disorder (obsolete MONDO:0019689)","secondary_identifiers":["Orphanet:93424"],"termid":"MONDO:0019689","xrefs":{"Monarch":{"xref_id":"0019689"}}}


id: GO:0042149
data:
  {"annotated_genes":["SJAG_03602","SJAG_01245","SJAG_02380","SJAG_02785","SJAG_00534","SJAG_03486","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88418,92177,97627,99625,110514,115617],"is_not":false,"summary":null,"term":"GO:0042149"},{"annotations":[101571],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00534":null,"SJAG_01245":null,"SJAG_02380":null,"SJAG_02785":null,"SJAG_03048":null,"SJAG_03486":null,"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucose starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042149","terms_by_termid":{"GO:0042149":null,"GO:1904547":null}}


id: PBO:0113310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic crossing over; component of the Synaptonemal Complex (SC) along with Ecm11p; required for the efficient loading of the SC transverse filament protein, Zip1p; promotes SUMOylation of Ecm11p; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; transcription is regulated by Ume6p and induced in response to alpha factor; also detected in peroxisomes","termid":"PBO:0113310"}


id: GO:0018979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trichloroethylene, a toxic, colorless, photoreactive, chlorinated hydrocarbon liquid, commonly used as a metal degreaser and solvent.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichloroethylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tce"],"synonyms":[{"name":"TCE metabolic process","type":"exact"},{"name":"TCE metabolism","type":"exact"},{"name":"trichloroethene metabolic process","type":"exact"},{"name":"trichloroethene metabolism","type":"exact"},{"name":"trichloroethylene metabolism","type":"exact"}],"termid":"GO:0018979"}


id: PBO:0027517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_polymerase_II_carboxy-terminal_domain_kinase_activity","termid":"PBO:0027517"}


id: FYPO:0000802
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[118451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[118492],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[118439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[118496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[118656,118661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[118601],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[118472],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[118440,118552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[118493],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cytoskeleton organization is abnormal.","definition_xrefs":["GO:0007010","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization phenotype","termid":"FYPO:0000295"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_03596","SJAG_04522","SJAG_02392","SJAG_04280"],"name":"abnormal cytoskeleton organization","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_03596","SJAG_04280","SJAG_01143","SJAG_04522","SJAG_04703","SJAG_02592","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","for3delta","sty1delta","mid1delta","rga4delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cytoskeleton organisation","type":"exact"}],"termid":"FYPO:0000802","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0038967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADNP homeobox 2","termid":"PBO:0038967"}


id: PBO:0056605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDN1 antisense RNA 1","termid":"PBO:0056605"}


id: SO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary between the spliced leader and the first exon of the mRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_junction","synonyms":[{"name":"trans-splice junction","type":"exact"}],"termid":"SO:0001474"}


id: MONDO:0010967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the TMC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 7","secondary_identifiers":["UMLS:C1832978","DOID:0110520","GARD:22587","MESH:C563417","OMIM:600974","MEDGEN:322084"],"synonyms":[{"name":"DFNB11","type":"narrow"},{"name":"DFNB7","type":"narrow"},{"name":"TMC1 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in TMC1","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 7","type":"exact"},{"name":"deafness, autosomal recessive 11","type":"narrow"},{"name":"deafness, autosomal recessive 7","type":"narrow"},{"name":"deafness, autosomal recessive type 7","type":"narrow"}],"termid":"MONDO:0010967","xrefs":{"Monarch":{"xref_id":"0010967"}}}


id: GO:0030611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the interconversion of arsenate and arsenite.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arsenate reductase activity","termid":"GO:0030611"}


id: GO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo conjugation with cellular fusion, the process resulting in desensitization following exposure to pheromone stimulus that act to down-regulate further stimulation or block initial conjugation responses. An example of this is the adaptation to pheromone during conjugation with cellular fusion in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion","secondary_identifiers":["GO:0007331","GO:0030453"],"synonyms":[{"name":"adaptation of signalling pathway by response to pheromone involved in conjugation with cellular fusion","type":"exact"},{"name":"adaptation to pheromone during conjugation with cellular fusion","type":"related"},{"name":"desensitization to pheromone during conjugation with cellular fusion","type":"exact"}],"termid":"GO:0000754"}


id: FYPO:0001376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular calcium level","termid":"FYPO:0001199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular calcium level during cellular response to salt stress","synonyms":[{"name":"normal cellular calcium accumulation during cellular response to salt stress","type":"related"},{"name":"normal cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"normal cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001376"}


id: PBO:0057969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689b","termid":"PBO:0057969"}


id: PBO:0064468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta interacting protein 2","termid":"PBO:0064468"}


id: FYPO:0003602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is abolished.","definition_xrefs":["PMID:24298023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abolished mRNA splicing, via spliceosome","synonyms":[{"name":"abolished mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"abolished mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"abolished nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"abolished splicing","type":"broad"},{"name":"mRNA splicing via spliceosome abolished","type":"exact"}],"termid":"FYPO:0003602"}


id: PR:Q9P779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin C1711.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.11","synonyms":[{"name":"Spom972h-SPBC1711.11","type":"exact"}],"termid":"PR:Q9P779"}


id: MONDO:0006015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serious disorder characterized by massive adrenal gland hemorrhage secondary to a bacterial infection, most often Neisseria meningitidis infection. It is manifested with decreased blood pressure, shock, disseminated intravascular coagulation, and adrenocortical insufficiency.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"acute adrenal insufficiency","termid":"MONDO:0019801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waterhouse-Friderichsen syndrome","secondary_identifiers":["NCIT:C85225","ICD10CM:A39.1","ICD10EXP:A39.1+","GARD:9449","ICD9:036.3","Orphanet:100067","SCTID:36102002","UMLS:C1403891","MedDRA:10047847","DOID:9931","EFO:0007544","icd11.foundation:2072098125","MEDGEN:234675","ICD10EXP:E35.1*","MESH:D014884"],"synonyms":[{"name":"WFS","type":"exact"},{"name":"Waterhouse–Friderichsen syndrome","type":"related"},{"name":"fatal pneumococcal Waterhouse-Friderichsen syndrome","type":"related"},{"name":"meningococcal hemorrhagic adrenalitis","type":"exact"}],"termid":"MONDO:0006015","xrefs":{"Monarch":{"xref_id":"0006015"}}}


id: MONDO:0017898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of mendelian susceptibility to mycobacterial diseases due to a partial deficiency.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency (obsolete MONDO:0017898)","secondary_identifiers":["Orphanet:319539"],"synonyms":[{"name":"autosomal recessive MSMD due to a partial deficiency","type":"exact"},{"name":"mendelian susceptibility to mycobacterial diseases due to a partial deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0017898","xrefs":{"Monarch":{"xref_id":"0017898"}}}


id: GO:0019389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glucuronosides, any compound formed by combination in glycosidic linkage of a hydroxy compound with the anomeric carbon atom of a glucuronate.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glucuronoside metabolic process (obsolete GO:0019389)","synonyms":[{"name":"glucuronide metabolic process","type":"exact"},{"name":"glucuronide metabolism","type":"exact"},{"name":"glucuronoside metabolism","type":"exact"}],"termid":"GO:0019389"}


id: PBO:0091128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific microprotein Smp3","termid":"PBO:0091128"}


id: GO:0019588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol, yielding energy in the form of ATP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol catabolic process","termid":"GO:0019563"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"anaerobic glycerol catabolic process","synonyms":[{"name":"glycerol fermentation","type":"exact"}],"termid":"GO:0019588"}


id: PBO:0063158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 4","termid":"PBO:0063158"}


id: GO:1904882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomerase catalytic core complex assembly.","definition_xrefs":["PMID:26586433","GOC:BHF","GOC:BHF_telomere","GOC:rph","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"telomerase catalytic core complex assembly","termid":"GO:1904868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of telomerase catalytic core complex assembly","synonyms":[{"name":"regulation of TERT-TERC complex assembly","type":"related"},{"name":"regulation of TERT-TERC complex formation","type":"related"},{"name":"regulation of telomerase catalytic core complex formation","type":"exact"}],"termid":"GO:1904882"}


id: PBO:0027255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_nitrogen_starvation","termid":"PBO:0027255"}


id: PBO:0055865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 12","termid":"PBO:0055865"}


id: GO:0075196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a haustorium mother cell of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont infection structure to host","termid":"GO:0075001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont haustorium mother cell to host","synonyms":[{"name":"adhesion of symbiont haustorium mother cell to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075196"}


id: GO:0070443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that consists of a heterodimer of the bHLH-ZIP proteins Mad and Max.","definition_xrefs":["PMID:8224841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Mad-Max complex","termid":"GO:0070443"}


id: MONDO:0022575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A syndromic disease characterized by a small ductal system and reduction in the number of interlobular bile ducts.","definition_xrefs":["PMID:12664410"],"gene_count":0,"genotype_count":0,"name":"obsolete biliary hypoplasia (obsolete MONDO:0022575)","termid":"MONDO:0022575","xrefs":{"Monarch":{"xref_id":"0022575"}}}


id: PBO:0055421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2851","termid":"PBO:0055421"}


id: PBO:0073796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 3","termid":"PBO:0073796"}


id: PBO:0041274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1QTNF1 antisense RNA 1","termid":"PBO:0041274"}


id: GO:0051992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans,octa-cis-undecaprenyl phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine = di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UMP.","definition_xrefs":["RHEA:28386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016780"],"is_obsolete":false,"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity","secondary_identifiers":["MetaCyc:PHOSNACMURPENTATRANS-RXN"],"termid":"GO:0051992"}


id: FYPO:0004404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing JM216 (also called satraplatin).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on JM216","synonyms":[{"name":"normal cell population growth in presence of JM216","type":"exact"},{"name":"normal cell population growth on JM216","type":"exact"},{"name":"normal cell population growth on satraplatin","type":"exact"},{"name":"normal cellular response to JM216","type":"related"},{"name":"normal vegetative cell population growth on JM216","type":"exact"}],"termid":"FYPO:0004404"}


id: PBO:0031655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031655"}


id: PBO:0063303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC-esterase domain containing 1C, pseudogene","termid":"PBO:0063303"}


id: MOD:01276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-tyrosine residue.","definition_xrefs":["Unimod:276#Y","PubMed:10906242","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-[4-(2-aminoethyl)benzenesulfonyl]tyrosine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01276"}


id: MONDO:1012122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypothyroidism, non-human animal","termid":"MONDO:1011678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypothyroidism, domestic cat","secondary_identifiers":["OMIA:000538-9685"],"termid":"MONDO:1012122","xrefs":{"Monarch":{"xref_id":"1012122"}}}


id: PBO:0005123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set1","termid":"PBO:0005123"}


id: GO:0002863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inflammatory response to antigenic stimulus","synonyms":[{"name":"activation of inflammatory response to antigenic stimulus","type":"narrow"},{"name":"stimulation of inflammatory response to antigenic stimulus","type":"narrow"},{"name":"up regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"up-regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"upregulation of inflammatory response to antigenic stimulus","type":"exact"}],"termid":"GO:0002863"}


id: PBO:0028904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028904"}


id: MOD:01108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid, glutamtic acid anisole adduct.","definition_xrefs":["DeltaMass:259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"anisyl modified residue","termid":"MOD:01007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid (Glu)","synonyms":[{"name":"anisole adducted glutamyl","type":"exact"}],"termid":"MOD:01108"}


id: GO:0033220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + amide(out) = ADP + phosphate + amide(in).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled amide-transporter activity (obsolete GO:0033220)","synonyms":[{"name":"ATP-dependent amide-transporter activity","type":"exact"},{"name":"amide-transporting ATPase activity","type":"exact"}],"termid":"GO:0033220"}


id: MONDO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term that refers to vascular neoplasms with a prominent hemangiopericytic growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiopericytic tumor","secondary_identifiers":["MEDGEN:99196","NCIT:C7076","UMLS:C0476144","DOID:3850"],"synonyms":[{"name":"hemangiopericytic neoplasm","type":"exact"}],"termid":"MONDO:0002789","xrefs":{"Monarch":{"xref_id":"0002789"}}}


id: GO:0021701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Golgi cell. Differentiation includes the processes involved in commitment of a neuroblast to a Golgi cell fate. A cerebellar Golgi cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","PMID:15157725","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Golgi cell differentiation","termid":"GO:0021701"}


id: PBO:0053724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 938","termid":"PBO:0053724"}


id: GO:0035839
data:
  {"annotated_genes":["SJAG_00333","SJAG_04058","SJAG_03126","SJAG_02838","SJAG_01196","SJAG_00030","SJAG_03705","SJAG_03379","SJAG_00028"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87970,90340,103815,108570,109901,113174],"is_not":false,"summary":null,"term":"GO:0035839"},{"annotations":[111085,117026,100112,109894],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140472"}]},"cv_name":"cellular_component","definition":"A cell tip at which no growth takes place. For example, in fission yeast the cell end newly formed by cell division does not grow immediately upon its formation, and lacks actin cytoskeletal structures.","definition_xrefs":["GOC:expert_jd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00333":null,"SJAG_01196":null,"SJAG_02838":null,"SJAG_03126":null,"SJAG_03379":null,"SJAG_03705":null,"SJAG_04058":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"non-growing cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"new cell end","type":"related"},{"name":"non-growing cell end","type":"exact"}],"termid":"GO:0035839","terms_by_termid":{"GO:0035839":null,"GO:0140472":null}}


id: PBO:0062778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 7 pseudogene","termid":"PBO:0062778"}


id: PBO:0043849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 (Knops blood group)","termid":"PBO:0043849"}


id: PBO:0054937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2351","termid":"PBO:0054937"}


id: GO:0140062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-formylcytosine+ 2-oxoglutarate + O2 = 5-carboxylcytosine + succinate + CO2.","definition_xrefs":["PMID:27918559"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-formylcytosine dioxygenase activity (obsolete GO:0140062)","synonyms":[{"name":"5fC dioxygenase","type":"exact"}],"termid":"GO:0140062"}


id: GO:0061743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism acquires a novel neuromuscular action or movement as the result of experience.","definition_xrefs":["GOC:bf","GOC:PARL","Wikipedia:Motor_learning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning","termid":"GO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor learning","termid":"GO:0061743"}


id: MONDO:0850339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade ependymoma that is located within the posterior fossa.","definition_xrefs":["DOID:0080889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic ependymoma","termid":"MONDO:0016700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"posterior fossa ependymoma","secondary_identifiers":["UMLS:C5670542","MEDGEN:1811888"],"termid":"MONDO:0850339","xrefs":{"Monarch":{"xref_id":"0850339"}}}


id: PBO:0046452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor pathway substrate 8","termid":"PBO:0046452"}


id: PBO:0081629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 559","termid":"PBO:0081629"}


id: MONDO:0005291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired aneurysm within the cranium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral arterial disease","termid":"MONDO:0006693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain aneurysm","secondary_identifiers":["MEDGEN:196706","MESH:D002532","DOID:10941","UMLS:C0751003","EFO:0003870"],"synonyms":[{"name":"brain aneurysm","type":"exact"},{"name":"intracranial aneurysm","type":"related"}],"termid":"MONDO:0005291","xrefs":{"Monarch":{"xref_id":"0005291"}}}


id: MONDO:0005839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Marburg hemorrhagic fever (obsolete MONDO:0005839)","termid":"MONDO:0005839","xrefs":{"Monarch":{"xref_id":"0005839"}}}


id: MONDO:0017618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital sucrase-isomaltase deficiency","termid":"MONDO:0009114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"congenital sucrase-isomaltase deficiency with starch intolerance","secondary_identifiers":["Orphanet:306436"],"synonyms":[{"name":"CSID with starch intolerance","type":"exact"},{"name":"congenital sucrase-isomaltose malabsorption with starch intolerance","type":"exact"},{"name":"congenital sucrose intolerance with starch intolerance","type":"exact"},{"name":"disaccharide intolerance with starch intolerance","type":"exact"}],"termid":"MONDO:0017618","xrefs":{"Monarch":{"xref_id":"0017618"}}}


id: MONDO:0003056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I meningioma characterized by the presence of prominent chronic inflammatory infiltrates that predominate over the meningioma cells.","definition_xrefs":["NCIT:C4720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoplasmacyte-rich meningioma","secondary_identifiers":["UMLS:C0431119","DOID:4591","MEDGEN:140907"],"synonyms":[{"name":"lymphoplasmacyte-rich meningioma","type":"exact"},{"name":"lymphoplasmocyte-rich meningioma","type":"exact"},{"name":"lymphoplasmocyte-rich meningioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003056","xrefs":{"Monarch":{"xref_id":"0003056"}}}


id: MONDO:0016958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 7q duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the long arm (q) of chromosome 7. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 7q duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 7","termid":"MONDO:0016928"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 7","secondary_identifiers":["MEDGEN:208637","GARD:5357","icd11.foundation:462724513","Orphanet:262887","MESH:C537821","UMLS:C0795821"],"synonyms":[{"name":"7q duplication","type":"related"},{"name":"7q trisomy","type":"related"},{"name":"Duplication 7q","type":"related"},{"name":"chromosome 7q duplication","type":"related"},{"name":"partial duplication of chromosome 7q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 7","type":"exact"},{"name":"partial trisomy 7q","type":"related"},{"name":"partial trisomy of chromosome 7q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 7","type":"exact"},{"name":"trisomy 7q","type":"related"}],"termid":"MONDO:0016958","xrefs":{"Monarch":{"xref_id":"0016958"}}}


id: PBO:0084540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; ERP4 has a paralog, ERP2, that arose from the whole genome duplication","termid":"PBO:0084540"}


id: PR:O94546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug150 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 150 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.07c","synonyms":[{"name":"Spom972h-mug150","type":"exact"}],"termid":"PR:O94546"}


id: GO:0062044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BFH","PMID:20951801","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial to mesenchymal transition","termid":"GO:0010719"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"negatively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062044"}


id: PBO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 1","termid":"PBO:0043629"}


id: PBO:0110322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 4 (PEL blood group)","termid":"PBO:0110322"}


id: PR:000044700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is monomethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00085.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht2/Me(K9)","termid":"PR:000027593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed K9-monomethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me1","type":"exact"}],"termid":"PR:000044700"}


id: PBO:0083786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family; human homolog DDX51 complements yeast dbp6 mutant","termid":"PBO:0083786"}


id: GO:1902001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fatty acid is transported across a membrane.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:9395310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transport","termid":"GO:0015908"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"fatty acid transmembrane transport","termid":"GO:1902001"}


id: PBO:0072732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 2","termid":"PBO:0072732"}


id: PBO:0003005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIPSY domain","termid":"PBO:0003005"}


id: PBO:0078446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining P1","termid":"PBO:0078446"}


id: GO:0004134
data:
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id: GO:1901712
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id: PBO:0034552
data:
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id: GO:0050037
data:
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id: MONDO:0015675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distomatosis is a group of parasitoses caused by flat worms that live in contact with epitheliums. Clinical classification depends on the organ infected by the adult parasite: liver, lungs, or intestines.","definition_xrefs":["Orphanet:1685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distomatosis","secondary_identifiers":["MEDGEN:21251","SCTID:26089000","ICD9:121.9","GARD:1891","UMLS:C0040820","ICD9:121.8"],"synonyms":[{"name":"distomiasis","type":"exact"},{"name":"fluke infection","type":"exact"}],"termid":"MONDO:0015675","xrefs":{"Monarch":{"xref_id":"0015675"}}}


id: GO:0048519
data:
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id: PBO:0081650
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id: GO:0002258
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id: GO:0042617
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id: MONDO:0800038
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id: GO:0060442
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id: PBO:0071814
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id: GO:0043751
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id: GO:1901004
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id: PBO:0054926
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id: MONDO:0030482
data:
  {"annotated_genes":["SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85268],"is_not":false,"summary":null,"term":"MONDO:0030482"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"PI4KA-related disorder","termid":"MONDO:1040012"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 84, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794235","Orphanet:631079","DOID:0112347","OMIM:619621","UMLS:C5562025"],"synonyms":[{"name":"SPG84","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 84","type":"exact"}],"termid":"MONDO:0030482","terms_by_termid":{"MONDO:0030482":null},"xrefs":{"Monarch":{"xref_id":"0030482"}}}


id: GO:0031119
data:
  {"annotated_genes":["SJAG_04065","SJAG_01172","SJAG_02978","SJAG_03572","SJAG_00319","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90413,93858,101677,105391,111622,113427],"is_not":false,"summary":null,"term":"GO:0031119"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_01172":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031119","terms_by_termid":{"GO:0031119":null}}


id: PBO:0005446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK-activated protein kinase Srk1","termid":"PBO:0005446"}


id: GO:0005364
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94967],"is_not":false,"summary":null,"term":"GO:0005364"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: maltose(out) + H+(out) = maltose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"maltose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen/maltose transporter activity","type":"broad"},{"name":"maltose permease","type":"broad"},{"name":"maltose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0005364","terms_by_termid":{"GO:0005364":null}}


id: GO:0036272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gemcitabine stimulus. Gemcitabine is a 2'-deoxycytidine having geminal fluoro substituents in the 2'-position, and is used as a drug in the treatment of various carcinomas.","definition_xrefs":["GOC:hp","Wikipedia:Gemcitabine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gemcitabine","synonyms":[{"name":"response to 2',2'-difluorodeoxycytidine","type":"exact"},{"name":"response to 2'-deoxy-2',2'-difluorocytidine","type":"exact"}],"termid":"GO:0036272"}


id: PBO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4 (predicted)","termid":"PBO:0002271"}


id: GO:0034801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dinitrocyclohexanone + OH- = 4,6-dinitrohexanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dinitrocyclohexanone hydrolase activity (obsolete GO:0034801)","termid":"GO:0034801"}


id: GO:0030944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a KDEL sequence, the C terminus tetrapeptide sequence Asp-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"DDEL sequence binding","termid":"GO:0030944"}


id: PBO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"after human WDR21","termid":"PBO:0000291"}


id: MOD:01809
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 5x(13)C,1x(15)N labeled residue.","definition_xrefs":["Unimod:268","PubMed:12771378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C,1x(15)N labeled residue","synonyms":[{"name":"13C(5) 15N(1) Silac label","type":"related"},{"name":"Label:13C(5)15N(1)","type":"related"}],"termid":"MOD:01809"}


id: GO:0032305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of an icosanoid from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid transport","termid":"GO:2000193"},{"relation_name":"positively_regulates","term_name":"icosanoid secretion","termid":"GO:0032309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of icosanoid secretion","synonyms":[{"name":"activation of icosanoid secretion","type":"narrow"},{"name":"positive regulation of eicosanoid secretion","type":"exact"},{"name":"stimulation of icosanoid secretion","type":"narrow"},{"name":"up regulation of icosanoid secretion","type":"exact"},{"name":"up-regulation of icosanoid secretion","type":"exact"},{"name":"upregulation of icosanoid secretion","type":"exact"}],"termid":"GO:0032305"}


id: GO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interferon-gamma (a type II interferon) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:15546383","GOC:ai","GOC:add","ISBN:0126896631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon receptor activity","termid":"GO:0004904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"type II interferon receptor activity","synonyms":[{"name":"IFN-gamma receptor activity","type":"exact"},{"name":"IFNG receptor activity","type":"exact"},{"name":"interferon-gamma receptor activity","type":"exact"}],"termid":"GO:0004906"}


id: MONDO:0022057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow growing, locally invasive neoplasm arising from tooth-forming tissues. It most often grows intraosseously in the mandible and less frequently in the maxilla. In a minority of cases it grows extraosseously in the gingiva. It is characterized by the presence of a fibrous stroma, epithelial cells with abundant eosinophilic cytoplasm, and amyloid material which is often calcified. Small tumors may be successfully treated with enucleation. Local resection is usually required for larger tumors. Recurrences have been reported in a minority of cases.","definition_xrefs":["NCIT:C54301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"calcifying epithelial odontogenic tumor","secondary_identifiers":["MEDGEN:87266","ICDO:9340/0","MESH:C537961","UMLS:C0334574"],"synonyms":[{"name":"CEOT","type":"related"},{"name":"Pindborg tumor","type":"exact"},{"name":"Pindborg tumour","type":"exact"},{"name":"calcifying epithelial odontogenic tumor","type":"exact"}],"termid":"MONDO:0022057","xrefs":{"Monarch":{"xref_id":"0022057"}}}


id: PBO:0064242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D1","termid":"PBO:0064242"}


id: PBO:0077093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell immunoreceptor with Ig and ITIM domains","termid":"PBO:0077093"}


id: PBO:0087483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability; plays a role in copper homeostasis","termid":"PBO:0087483"}


id: PBO:0050906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein 44 like","termid":"PBO:0050906"}


id: MONDO:0859353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 49, without situs inversus","secondary_identifiers":["MEDGEN:1824064","UMLS:C5774291","OMIM:620197"],"termid":"MONDO:0859353","xrefs":{"Monarch":{"xref_id":"0859353"}}}


id: FYPO:0005257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-proline measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular proline level","synonyms":[{"name":"decreased cellular L-proline level","type":"exact"},{"name":"decreased cellular proline level during mitotic cell cycle","type":"related"},{"name":"decreased cellular proline level during vegetative growth","type":"exact"},{"name":"decreased level of proline in cell","type":"exact"},{"name":"reduced cellular proline level","type":"exact"},{"name":"reduced level of proline in cell","type":"exact"}],"termid":"FYPO:0005257"}


id: MONDO:0043005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of multiple congenital anomalies/dysmorphic syndrome that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome (obsolete MONDO:0043005)","secondary_identifiers":["Orphanet:183533"],"synonyms":[{"name":"hereditary multiple congenital anomalies/dysmorphic syndrome","type":"exact"}],"termid":"MONDO:0043005","xrefs":{"Monarch":{"xref_id":"0043005"}}}


id: PBO:0051274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 5","termid":"PBO:0051274"}


id: PBO:0028807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028807"}


id: MONDO:0010301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thrombocythemia, X-linked (obsolete MONDO:0010301)","termid":"MONDO:0010301","xrefs":{"Monarch":{"xref_id":"0010301"}}}


id: FYPO:0008095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a cell has a volume that is larger than normal during G0.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell size","termid":"FYPO:0008096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cell size during G0","termid":"FYPO:0008095"}


id: PBO:0058342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4715","termid":"PBO:0058342"}


id: MONDO:0010328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-thalassemia-myelodysplastic syndrome (ATMDS) is an acquired form of alpha-thalassemia characterized by a myelodysplastic syndrome (MDS) or more rarely a myeloproliferative disease (MPD) associated with hemoglobin H disease (HbH).","definition_xrefs":["Orphanet:231401"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acquired","termid":"MONDO:0021141"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"alpha-thalassemia-myelodysplastic syndrome","secondary_identifiers":["DOID:0112125","GARD:17167","ICD9:282.49","OMIM:300448","MESH:C563023","ICD10CM:D56.0","MEDGEN:108433","SCTID:307343001","UMLS:C0585216"],"synonyms":[{"name":"ALPHA-thalassemia myelodysplasia syndrome","type":"related"},{"name":"ATMDS","type":"exact"},{"name":"Haemoglobin H disease, acquired","type":"related"},{"name":"Hemoglobin H disease, acquired","type":"related"},{"name":"acquired HbH disease","type":"exact"},{"name":"acquired haemoglobin H disease","type":"exact"},{"name":"acquired hemoglobin H disease","type":"exact"},{"name":"alpha-thalassemia myelodysplasia syndrome, somatic","type":"exact"}],"termid":"MONDO:0010328","xrefs":{"Monarch":{"xref_id":"0010328"}}}


id: GO:0010632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell migration.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell migration","termid":"GO:0010632"}


id: PBO:0055570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3006","termid":"PBO:0055570"}


id: PATO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility quality inhering in a substance by virtue of the bearer's inability of a substance to dissolve in a liquid.","definition_xrefs":["edp:edp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solubility","termid":"PATO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insoluble in","synonyms":[{"name":"insoluble","type":"exact"}],"termid":"PATO:0001538"}


id: FYPO:0007652
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a single nucleus and an asymmetrically located septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"mononucleate vegetative cell with mislocalized septum and anucleate compartment","synonyms":[{"name":"mononucleate cell with mislocalized septum and anucleate compartment during vegetative growth","type":"exact"},{"name":"mononucleate monoseptate vegetative cell with mislocalized septum and anucleate compartment","type":"exact"},{"name":"mononucleate vegetative cell with abnormal septum location and anucleate compartment","type":"exact"},{"name":"mononucleate vegetative cell with abnormal septum position and anucleate compartment","type":"exact"},{"name":"mononucleate vegetative cell with asymmetric septum and anucleate compartment","type":"exact"},{"name":"mononucleate vegetative cell with asymmetrically located septum and anucleate compartment","type":"exact"},{"name":"mononucleate vegetative cell with mislocalised septum and anucleate compartment","type":"exact"},{"name":"mononucleate vegetative cell with mislocalized septum","type":"exact"},{"name":"mononucleate vegetative cell with mislocalized septum and anucleate compartment during mitotic cell cycle","type":"related"},{"name":"mononucleate vegetative cell with misplaced septum and anucleate compartment","type":"exact"},{"name":"mononucleate vegetative cell with single mislocalized septum and anucleate compartment","type":"exact"}],"termid":"FYPO:0007652"}


id: PBO:0082312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for F1 sector of mitochondrial F1F0 ATP synthase; conserved protein; required for assembly of alpha and beta subunits into F1 sector of mitochondrial F1F0 ATP synthase; human homolog ATPAF2 can complement yeast atp12 mutant; mutation of human homolog reduces active ATP synthase levels and is associated with the disorder ATPAF2 deficiency","termid":"PBO:0082312"}


id: GO:0098906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a Purkinje myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"regulates","term_name":"Purkinje myocyte action potential","termid":"GO:0086017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Purkinje myocyte action potential","termid":"GO:0098906"}


id: MONDO:8000034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder (obsolete MONDO:8000034)","secondary_identifiers":["Orphanet:557493"],"termid":"MONDO:8000034","xrefs":{"Monarch":{"xref_id":"8000034"}}}


id: PBO:0052772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 64","termid":"PBO:0052772"}


id: MONDO:0850223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endocarditis that is characterized by Libman-Sacks vegetations, is common in patients with systemic lupus erythematosus and is commonly complicated with embolic cerebrovascular disease.","definition_xrefs":["DOID:0080740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of cardiovascular system","termid":"MONDO:0000603"},{"relation_name":"is_a","term_name":"endocarditis","termid":"MONDO:0005025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Libman-Sacks endocarditis","secondary_identifiers":["UMLS:C0242380","MEDGEN:69175"],"termid":"MONDO:0850223","xrefs":{"Monarch":{"xref_id":"0850223"}}}


id: PR:P36601
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein RAD51 homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.14c","secondary_identifiers":["UniProtKB:P36601"],"synonyms":[{"name":"RAD51 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC644.14c","type":"related"},{"name":"Spom972h-RAD51","type":"exact"},{"name":"rad51","type":"related"}],"termid":"PR:P36601"}


id: PBO:0029882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029882"}


id: PBO:0083003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Amino acid N-acetyltransferase that detoxifies D-amino acids; catalyzes N-acetylation of D-amino acids through ordered bi-bi mechanism in which acetyl-CoA is first substrate bound and CoA is last product liberated; acetylates histones and polyamines, also autoacetylates","termid":"PBO:0083003"}


id: GO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery.","definition_xrefs":["GOC:hjd","GOC:mr","NIF_Subcellular:sao1571698684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"is_a","term_name":"X chromosome","termid":"GO:0000805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"Barr body","secondary_identifiers":["Wikipedia:Barr_body"],"termid":"GO:0001740"}


id: GO:0102512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = delphinidin 3-O-beta-D-glucoside-5-O-beta-D-glucoside betaine + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102512)","termid":"GO:0102512"}


id: PBO:0066910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 211","termid":"PBO:0066910"}


id: MONDO:0020613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--lke (obsolete MONDO:0020613)","secondary_identifiers":["OMIM:111130"],"synonyms":[{"name":"BLOOD GROUP--LKE","type":"related"},{"name":"Blood Group--Luke","type":"related"},{"name":"Blood Group--Luke, Formerly","type":"related"},{"name":"LKE","type":"related"}],"termid":"MONDO:0020613","xrefs":{"Monarch":{"xref_id":"0020613"}}}


id: PBO:0074991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-2","termid":"PBO:0074991"}


id: PBO:0056096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 1","termid":"PBO:0056096"}


id: FYPO:0002508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"decreased protein palmitoylation","termid":"FYPO:0002505"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein palmitoylation during vegetative growth","synonyms":[{"name":"decreased protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"reduced protein palmitoylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002508"}


id: PBO:0089916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Bmt5","termid":"PBO:0089916"}


id: PBO:0052682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 50","termid":"PBO:0052682"}


id: PBO:0026687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_carboxypeptidase_activity","termid":"PBO:0026687"}


id: PBO:0042502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 22","termid":"PBO:0042502"}


id: GO:0032505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biological process in which new individuals are produced by one or two single-celled organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete reproduction of a single-celled organism (obsolete GO:0032505)","termid":"GO:0032505"}


id: PBO:0045265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNL-type zinc finger","termid":"PBO:0045265"}


id: PBO:0042849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 58","termid":"PBO:0042849"}


id: PBO:0090390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methyl-5-thioadenosine phosphorylase Mta1","termid":"PBO:0090390"}


id: MONDO:0020650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"},{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell tumor of the vulva","secondary_identifiers":["MEDGEN:925540","ONCOTREE:VGCT","UMLS:C4288008"],"termid":"MONDO:0020650","xrefs":{"Monarch":{"xref_id":"0020650"}}}


id: PBO:0074286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 1","termid":"PBO:0074286"}


id: MONDO:0030049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,xx sex reversal 5","secondary_identifiers":["UMLS:C5394441","DOID:0080943","MEDGEN:1713956","OMIM:618901"],"synonyms":[{"name":"46,XX SEX REVERSAL 5","type":"exact"},{"name":"46,xx sex reversal 5","type":"exact"},{"name":"SRXX5","type":"exact"}],"termid":"MONDO:0030049","xrefs":{"Monarch":{"xref_id":"0030049"}}}


id: MONDO:0008851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autism (obsolete MONDO:0008851)","termid":"MONDO:0008851","xrefs":{"Monarch":{"xref_id":"0008851"}}}


id: MONDO:0010080
data:
  {"annotated_genes":["SJAG_02274"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84434],"is_not":false,"summary":null,"term":"MONDO:0010080"}]},"cv_name":"mondo","definition":"The familial form of infantile bilateral striatal necrosis (IBSN), a syndrome of bilateral symmetric spongy degeneration of the caudate nucleus, putamen and globus pallidus characterized by developmental regression, choreoathetosis and dystonia progressing to spastic quadriparesis.","definition_xrefs":["Orphanet:225154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"striatonigral degeneration","termid":"MONDO:0003122"},{"relation_name":"is_a","term_name":"infantile bilateral striatal necrosis","termid":"MONDO:0015518"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0021179"],"is_obsolete":false,"name":"familial infantile bilateral striatal necrosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4087174","icd11.foundation:1873983370","GARD:17141","MEDGEN:1672478","OMIM:271930"],"synonyms":[{"name":"FBSN","type":"related"},{"name":"SNDI","type":"related"},{"name":"bilateral striatal Necrosis, infantile","type":"related"},{"name":"familial IBSN","type":"exact"},{"name":"familial bilateral striatal necrosis","type":"related"},{"name":"familial infantile striatonigral degeneration","type":"exact"},{"name":"familial infantile striatonigral necrosis","type":"exact"},{"name":"hereditary infantile bilateral striatal necrosis","type":"exact"},{"name":"infantile bilateral striatal necrosis","type":"related"},{"name":"striatal degeneration, familial","type":"related"},{"name":"striatonigral degeneration, infantile","type":"related"}],"termid":"MONDO:0010080","terms_by_termid":{"MONDO:0010080":null},"xrefs":{"Monarch":{"xref_id":"0010080"}}}


id: PBO:0068515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 107, pseudogene","termid":"PBO:0068515"}


id: GO:0036349
data:
  {"annotated_genes":["SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102731],"is_not":false,"summary":null,"term":"GO:0036349"}]},"cv_name":"biological_process","definition":"The non-sexual aggregation of single-celled organisms mediated by the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["PMID:22098069","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"galactose-specific flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098611"],"synonyms":[{"name":"cell-cell adhesion involved in galactose-specific flocculation","type":"exact"}],"termid":"GO:0036349","terms_by_termid":{"GO:0036349":null}}


id: GO:0050577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-fucose + NAD+ = GDP-4-dehydro-6-deoxy-D-mannose + NADH + H+.","definition_xrefs":["EC:1.1.1.271","MetaCyc:1.1.1.271-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"GDP-L-fucose synthase activity","secondary_identifiers":["Reactome:R-HSA-6787642","RHEA:18885"],"synonyms":[{"name":"GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase activity","type":"related"},{"name":"GDP-L-fucose:NADP+ 4-oxidoreductase (3,5-epimerizing)","type":"related"},{"name":"GDP-fucose synthetase activity","type":"related"}],"termid":"GO:0050577"}


id: PBO:0032760
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously thought to function in initiation","termid":"PBO:0032760"}


id: PATO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having the shape of a scythe or sickle.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/falciform"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"falciform","synonyms":[{"name":"falcate","type":"exact"},{"name":"hooked","type":"exact"},{"name":"scythe-shaped","type":"exact"},{"name":"sickle-shaped","type":"exact"},{"name":"unciform","type":"exact"},{"name":"uncinate","type":"exact"}],"termid":"PATO:0002215"}


id: GO:0045657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of monocyte differentiation","termid":"GO:0045655"},{"relation_name":"positively_regulates","term_name":"monocyte differentiation","termid":"GO:0030224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte differentiation","synonyms":[{"name":"activation of monocyte differentiation","type":"narrow"},{"name":"stimulation of monocyte differentiation","type":"narrow"},{"name":"up regulation of monocyte differentiation","type":"exact"},{"name":"up-regulation of monocyte differentiation","type":"exact"},{"name":"upregulation of monocyte differentiation","type":"exact"}],"termid":"GO:0045657"}


id: PBO:0085084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear-enriched ubiquitin-like polyubiquitin-binding protein; required for spindle pole body (SPB) duplication and for transit through the G2/M phase of the cell cycle; involved in proteolysis; interacts with the proteasome; protein abundance increases in response to DNA replication stress","termid":"PBO:0085084"}


id: PBO:0028193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_azetidine-2-carboxylic_acid_acetyltransferase_activity","termid":"PBO:0028193"}


id: GO:0120183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of disaggregation of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of focal adhesion disassembly","termid":"GO:0120182"},{"relation_name":"is_a","term_name":"positive regulation of cell-substrate junction organization","termid":"GO:0150117"},{"relation_name":"positively_regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of focal adhesion disassembly","termid":"GO:0120183"}


id: PBO:0052722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 14","termid":"PBO:0052722"}


id: PBO:0061419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide Y receptor Y4","termid":"PBO:0061419"}


id: PATO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porosity","termid":"PATO:0000973"}


id: MONDO:0020607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Liddle syndrome in which the cause of the disease is a mutation in the SCNN1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Liddle syndrome","termid":"MONDO:0008323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Liddle syndrome 1","secondary_identifiers":["OMIM:177200"],"synonyms":[{"name":"LIDLS1","type":"related"},{"name":"Liddle syndrome","type":"related"},{"name":"Liddle syndrome 1","type":"exact"},{"name":"Liddle syndrome caused by mutation in SCNN1B","type":"exact"},{"name":"Pseudoaldosteronism","type":"related"},{"name":"SCNN1B Liddle syndrome","type":"exact"}],"termid":"MONDO:0020607","xrefs":{"Monarch":{"xref_id":"0020607"}}}


id: GO:1903120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the location of an actin filament bundle.","definition_xrefs":["GO_REF:0000087","PMID:24798735","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to actin filament bundle","synonyms":[{"name":"protein localisation in actin filament bundle","type":"exact"},{"name":"protein localisation to actin filament bundle","type":"exact"},{"name":"protein localization in actin filament bundle","type":"exact"},{"name":"protein localization to actin cable","type":"related"}],"termid":"GO:1903120"}


id: GO:0005550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odorant binding","termid":"GO:0005549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pheromone binding","termid":"GO:0005550"}


id: FYPO:0003706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing K-252a.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on K-252a","synonyms":[{"name":"normal cell population growth in presence of K-252a","type":"exact"},{"name":"normal cell population growth on K-252a","type":"exact"},{"name":"normal cellular response to K-252a","type":"related"},{"name":"normal vegetative cell population growth on K-252a","type":"exact"}],"termid":"FYPO:0003706"}


id: GO:0000097
data:
  {"annotated_genes":["SJAG_00832","SJAG_00419","SJAG_04953","SJAG_02972","SJAG_00283","SJAG_01466","SJAG_02689","SJAG_01404","SJAG_00309","SJAG_03152","SJAG_03881","SJAG_01880","SJAG_04042","SJAG_02290","SJAG_00582","SJAG_00881","SJAG_04425","SJAG_03614","SJAG_03712","SJAG_00234","SJAG_02293","SJAG_04459","SJAG_00395","SJAG_03671","SJAG_03856","SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64848,110231,105151,109648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[101074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[94689,101075,96084,108608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[109649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019343"},{"annotations":[102803,110679,110680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[109650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[99856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[113066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[94760,99190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[106165,91859,111565,99842,88982,98211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[97606,101913,95837,97724,110233,111110,89231,114918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids containing sulfur, comprising cysteine, methionine and selenocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00283":null,"SJAG_00309":null,"SJAG_00395":null,"SJAG_00419":null,"SJAG_00582":null,"SJAG_00832":null,"SJAG_00881":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_01880":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03856":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04305":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"sulfur amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sulfur amino acid anabolism","type":"exact"},{"name":"sulfur amino acid biosynthesis","type":"exact"},{"name":"sulfur amino acid formation","type":"exact"},{"name":"sulfur amino acid synthesis","type":"exact"},{"name":"sulphur amino acid biosynthesis","type":"exact"},{"name":"sulphur amino acid biosynthetic process","type":"exact"}],"termid":"GO:0000097","terms_by_termid":{"GO:0006535":null,"GO:0009086":null,"GO:0019279":null,"GO:0019280":null,"GO:0019343":null,"GO:0019344":null,"GO:0019509":null,"GO:0052699":null,"GO:0071266":null,"GO:0071269":null,"GO:1990355":null}}


id: GO:1902935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a septin ring.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:16325501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"},{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to septin ring","synonyms":[{"name":"protein localisation in septin ring","type":"exact"},{"name":"protein localisation to septin ring","type":"exact"},{"name":"protein localization in septin ring","type":"exact"}],"termid":"GO:1902935"}


id: GO:0042084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to an acceptor molecule; dependent on the presence of 5-methyltetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"5-methyltetrahydrofolate-dependent methyltransferase activity","termid":"GO:0042084"}


id: GO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 3-sulfino-L-alanine (cysteinesulfinate) (out) + H+(in) + L-glutamate(in) = 3-sulfino-L-alanine(in) + H+(out) + L-glutamate(out).","definition_xrefs":["PMID:11566871","RHEA:70967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"3-sulfino-L-alanine: proton, glutamate antiporter activity","termid":"GO:0000514"}


id: PR:P0CT36
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-3 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.03c","synonyms":[{"name":"Spom972h-Tf2-3","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT36"}


id: MONDO:0957584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 85","secondary_identifiers":["OMIM:620490","UMLS:C5882685","DOID:0070584","MEDGEN:1849976"],"termid":"MONDO:0957584","xrefs":{"Monarch":{"xref_id":"0957584"}}}


id: MONDO:0015742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Periventricular leukomalacia (PVL) is a brain injury disorder characterized by the death of the white matter of the brain due to softening of the brain tissue. It can affect fetuses or newborns, and premature babies are at the greatest risk of the disorder. PVL is caused by a lack of oxygen or blood flow to thearea around the ventricles of the brain, which results in the death of brain tissue. Although babies with PVL generally have no apparent signs or symptoms of the disorder at delivery, they are at risk for motor disorders, cerebral palsy, delayed mental development, coordination problems, and vision and hearing impairments. There is no cure for PVL. Treatment is generally supportive. Prognosis is dependent on the extent of damage to the ventricles.","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalomalacia","termid":"MONDO:0006741"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periventricular leukomalacia","secondary_identifiers":["MEDGEN:6072","MESH:D007969","DOID:13088","EFO:1001101","SCTID:230769007","ICD9:779.7","NCIT:C99013","MedDRA:10052594","Orphanet:171676","UMLS:C0023529","ICD9:742.8"],"synonyms":[{"name":"PVL","type":"related"}],"termid":"MONDO:0015742","xrefs":{"Monarch":{"xref_id":"0015742"}}}


id: PATO:0001266
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated blue","synonyms":[{"name":"pale blue","type":"exact"}],"termid":"PATO:0001266"}


id: MONDO:0011545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nocturnal frontal lobe epilepsy in which the cause of the disease is a mutation in the CHRNB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-related hypermotor epilepsy","termid":"MONDO:0000030"},{"relation_name":"is_a","term_name":"autosomal dominant nocturnal frontal lobe epilepsy","termid":"MONDO:0020300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy 3","secondary_identifiers":["GARD:15380","UMLS:C1854335","DOID:0060684","MESH:C565334","MEDGEN:344263","OMIM:605375"],"synonyms":[{"name":"CHRNB2 autosomal dominant nocturnal frontal lobe epilepsy","type":"exact"},{"name":"ENFL3","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy caused by mutation in CHRNB2","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy type 3","type":"exact"},{"name":"epilepsy, nocturnal frontal lobe, 3","type":"related"},{"name":"epilepsy, nocturnal frontal lobe, type 3","type":"exact"},{"name":"nocturnal frontal lobe epilepsy 3","type":"exact"}],"termid":"MONDO:0011545","xrefs":{"Monarch":{"xref_id":"0011545"}}}


id: FYPO:0006056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the spindle pole body does not attach to the prospore membrane during prospore membrane formation and closure. Normally, the prospore membrane associates with the spindle pole body from late anaphase of meiosis II until the membrane has completely closed.","definition_xrefs":["PomBase:mah","PMID:18411246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000121","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"prospore formation with spindle pole body dissociated from prospore membrane","synonyms":[{"name":"forespore formation with spindle pole body dissociated from FSM","type":"exact"},{"name":"forespore formation with spindle pole body dissociated from forespore membrane","type":"exact"},{"name":"prospore formation with SPB dissociated from prospore membrane","type":"exact"},{"name":"spindle pole body separated from the FSM","type":"exact"}],"termid":"FYPO:0006056"}


id: PBO:0065280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2C pseudogene 1","termid":"PBO:0065280"}


id: GO:0072157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to distal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"distal tubule morphogenesis","termid":"GO:0072156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in distal tubule morphogenesis","termid":"GO:0072157"}


id: GO:0034740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains TFIIIC, topoisomerase 1, and Sub1/PC4. Characterized in human, the complex is involved in regulating transcription from RNA polymerase III (Pol III) promoters. Topoisomerase 1 and Sub1 enhance the accuracy of transcription termination, and promote reinitiation by Pol III.","definition_xrefs":["PMID:9660958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TFIIIC-TOP1-SUB1 complex","synonyms":[{"name":"TFIIIC-Topoisomerase 1-PC4 complex","type":"exact"}],"termid":"GO:0034740"}


id: PR:O13956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-rRNA-processing protein TSR1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein tsr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.15","secondary_identifiers":["UniProtKB:O13956"],"synonyms":[{"name":"Spom972h-TSR1","type":"exact"}],"termid":"PR:O13956"}


id: PBO:0055326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2754","termid":"PBO:0055326"}


id: PBO:0078336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 2-1","termid":"PBO:0078336"}


id: GO:1901497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diphenyl ether stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diphenyl ether","termid":"GO:1901497"}


id: MONDO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of embryonal rhabdomyosarcoma arising from organs with a mucosal epithelial surface. It is characterized by the formation of a cambium layer in the affected tissue and polypoid nodules within an abundant myxoid stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"botryoid rhabdomyosarcoma","secondary_identifiers":["NCIT:C9150","MEDGEN:727079","SCTID:404052009","DOID:3255","ICD9:171.9","UMLS:C1306574"],"synonyms":[{"name":"botryoid sarcoma","type":"exact"},{"name":"botryoid sarcoma (morphologic abnormality)","type":"exact"},{"name":"botryoid-type embryonal rhabdomyosarcoma","type":"exact"},{"name":"sarcoma botryoides","type":"exact"}],"termid":"MONDO:0002578","xrefs":{"Monarch":{"xref_id":"0002578"}}}


id: GO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of a metal into a metallo-molybdopterin complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metal incorporation into metallo-molybdopterin complex","termid":"GO:0042040"}


id: MONDO:0017245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary sequestration","termid":"MONDO:0017843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intralobar congenital pulmonary sequestration","secondary_identifiers":["GARD:21090","UMLS:C5679950","MEDGEN:1842539","Orphanet:280802"],"synonyms":[{"name":"congenital intrapulmonary sequestration","type":"exact"},{"name":"intralobar congenital bronchopulmonary sequestration","type":"exact"}],"termid":"MONDO:0017245","xrefs":{"Monarch":{"xref_id":"0017245"}}}


id: PBO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin/calnexin homolog (predicted)","termid":"PBO:0004253"}


id: PBO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transporter Itr1","termid":"PBO:0001652"}


id: PBO:0070515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 14","termid":"PBO:0070515"}


id: PBO:0110260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb11","termid":"PBO:0110260"}


id: GO:0140031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon phosphorylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}


id: PBO:0047518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZ family zinc finger 1","termid":"PBO:0047518"}


id: MONDO:0009853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Imerslund-Grasbeck syndrome (IGS) or selective vitamin B12 (cobalamin) malabsorption with proteinuria is a rare autosomal recessive disorder characterized by vitamin B12 deficiency commonly resulting in megaloblastic anemia, which is responsive to parenteral vitamin B12 therapy and appears in childhood.","definition_xrefs":["Orphanet:35858"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"megaloblastic anemia","termid":"MONDO:0001700"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited deficiency anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Imerslund-Grasbeck syndrome","secondary_identifiers":["ICD9:281.3","MESH:C538556","GARD:7006","icd11.foundation:375969525","MEDGEN:1640347","SCTID:360495000","UMLS:C4551825","OMIMPS:261100"],"synonyms":[{"name":"Gräsbeck-Imerslund disease","type":"related"},{"name":"Imerslund-Grasbeck syndrome","type":"exact"},{"name":"Imerslund-Gräsbeck syndrome","type":"exact"},{"name":"defect of enterocyte intrinsic factor receptor","type":"related"},{"name":"enterocyte cobalamin malabsorption","type":"related"},{"name":"familial megaloblastic anaemia","type":"exact"},{"name":"familial megaloblastic anemia","type":"exact"},{"name":"juvenile megaloblastic Anaemia","type":"exact"},{"name":"juvenile megaloblastic Anemia","type":"exact"},{"name":"selective cobalamin malabsorption with proteinuria","type":"exact"}],"termid":"MONDO:0009853","xrefs":{"Monarch":{"xref_id":"0009853"}}}


id: MONDO:0030329
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85565],"is_not":false,"summary":null,"term":"MONDO:0030329"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","termid":"MONDO:0025986"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619431","MEDGEN:1782906","UMLS:C5543636"],"synonyms":[{"name":"MMIHS5","type":"exact"},{"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 5","type":"exact"}],"termid":"MONDO:0030329","terms_by_termid":{"MONDO:0030329":null},"xrefs":{"Monarch":{"xref_id":"0030329"}}}


id: GO:0008403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-24 of 25-hydroxycholecalciferol (25-hydroxyvitamin D3) to form 24(R),25-dihydroxycholecalciferol.","definition_xrefs":["ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"vitamin D 24-hydroxylase activity","termid":"GO:0070576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"25-hydroxycholecalciferol-24-hydroxylase activity","secondary_identifiers":["RHEA:24968","GO:0030344"],"synonyms":[{"name":"25-hydroxyvitamin D3 24-hydroxylase activity","type":"exact"},{"name":"cytochrome P450 CYP24","type":"narrow"}],"termid":"GO:0008403"}


id: MONDO:1012906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in dogs due to a mutation in the LAMA2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital muscular dystrophy, LAMA2-related, dog","secondary_identifiers":["OMIA:002459-9615"],"termid":"MONDO:1012906","xrefs":{"Monarch":{"xref_id":"1012906"}}}


id: MONDO:0005693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cauda equina syndrome refers to a group of symptoms that occur when some of the nerves in the cauda equina (the bundle of nerves that spread out from the bottom of the spinal cord) become compressed and/or damaged. Signs and symptoms of this condition include pain, numbness, or tingling in the lower back and/or legs; ' foot drop '; problems with bowel and/or bladder control; and sexual dysfunction. Cauda equina syndrome may be caused by a herniated disk, tumor, infection, fracture, or spinal stenosis. Treatment usually targets the underlying cause of the condition and often includes surgery to remove the material that is pressing on the nerves. Physical therapy, occupational therapy, and/or other services may be required if symptoms persist following surgery.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina syndrome","secondary_identifiers":["MEDGEN:98229","SCTID:192970008","MESH:D000077684","NCIT:C35436","MESH:D011128","DOID:11577","icd11.foundation:1490265028","UMLS:C0392548","EFO:0007196","ICD10CM:G83.4","ICD9:344.6"],"synonyms":[{"name":"cauda equina syndromic disease","type":"exact"},{"name":"syndromic disease of cauda equina","type":"exact"}],"termid":"MONDO:0005693","xrefs":{"Monarch":{"xref_id":"0005693"}}}


id: PBO:0044443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 12","termid":"PBO:0044443"}


id: PR:O59772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04530","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein subunit sws2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.07","secondary_identifiers":["UniProtKB:O59772"],"synonyms":[{"name":"Spom972h-rpsM","type":"exact"}],"termid":"PR:O59772"}


id: MONDO:0009936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary pulmonary hypoplasia is a rare, isolated, genetic developmental defect during embryogenesis characterized by congential malformation of pulmonary parenchyma with absence of other anomalies. Neonatally patients present with decreased breath sounds, small lung volume and severe respiratory distress that is not responsive to aggressive treatment (including surfactant instillation/ mechanical respiratory support). It is usually not compatible with life.","definition_xrefs":["Orphanet:2257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial primary pulmonary hypoplasia","secondary_identifiers":["SCTID:277656005","UMLS:C0456891","icd11.foundation:1778475393","GARD:16591","OMIM:265430","ICD9:748.5","MEDGEN:141589"],"synonyms":[{"name":"lung agenesis","type":"related"},{"name":"primary pulmonary hypoplasia","type":"related"},{"name":"pulmonary hypoplasia, primary","type":"related"}],"termid":"MONDO:0009936","xrefs":{"Monarch":{"xref_id":"0009936"}}}


id: PR:O14344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inosine-5'-monophosphate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-5'-monophosphate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.14c","secondary_identifiers":["UniProtKB:O14344"],"synonyms":[{"name":"IMP dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2F12.14c","type":"related"},{"name":"Spom972h-guaB","type":"exact"}],"termid":"PR:O14344"}


id: GO:1904839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of male germ-line stem cell asymmetric division.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19339709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of asymmetric cell division","termid":"GO:0045769"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of male germ-line stem cell asymmetric division","termid":"GO:1904838"},{"relation_name":"negatively_regulates","term_name":"male germ-line stem cell asymmetric division","termid":"GO:0048133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male germ-line stem cell asymmetric division","synonyms":[{"name":"down regulation of male germ-line stem cell asymmetric division","type":"exact"},{"name":"down regulation of male germ-line stem cell renewal","type":"exact"},{"name":"down-regulation of male germ-line stem cell asymmetric division","type":"exact"},{"name":"down-regulation of male germ-line stem cell renewal","type":"exact"},{"name":"downregulation of male germ-line stem cell asymmetric division","type":"exact"},{"name":"downregulation of male germ-line stem cell renewal","type":"exact"},{"name":"inhibition of male germ-line stem cell asymmetric division","type":"narrow"},{"name":"inhibition of male germ-line stem cell renewal","type":"narrow"},{"name":"negative regulation of male germ-line stem cell renewal","type":"exact"}],"termid":"GO:1904839"}


id: SO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A helix is a secondary_structure conformation where the peptide backbone forms a coil.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"peptide_helix","secondary_identifiers":["BS:00152"],"synonyms":[{"name":"helix","type":"related"}],"termid":"SO:0001114"}


id: PBO:0052188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 1","termid":"PBO:0052188"}


id: PBO:0035926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bent_cell","termid":"PBO:0035926"}


id: GO:0048515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spermatid over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid differentiation","synonyms":[{"name":"spermatid cell differentiation","type":"exact"}],"termid":"GO:0048515"}


id: MONDO:0008101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial supernumerary nipples is a rare breast malformation characterized by the presence, in various members of a single family, of one or more nipple(s) and/or their related tissue, in addition to the normal bilateral chest nipples. The anomaly is usually situated along the embryonic milk line, from axillae to inguinal regions, but other locations are also possible. Association with dental abnormalities, Becker nevus, renal or underlying breast tissue malignancy and genitourinary malformations has been reported.","definition_xrefs":["Orphanet:2456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"supernumerary breasts","termid":"MONDO:0015854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial supernumerary nipples","secondary_identifiers":["MEDGEN:120564","UMLS:C0266011","OMIM:163700","GARD:2259"],"synonyms":[{"name":"accessory nipples","type":"related"},{"name":"isolated polythelia","type":"exact"},{"name":"nipples, supernumerary","type":"related"},{"name":"polymastia","type":"related"},{"name":"polythelia, familial","type":"related"}],"termid":"MONDO:0008101","xrefs":{"Monarch":{"xref_id":"0008101"}}}


id: MONDO:0020841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with cerebellar atrophy and with or without seizures","secondary_identifiers":["OMIM:618056","UMLS:C4748032","MEDGEN:1648373"],"synonyms":[{"name":"NEDCAS","type":"exact"},{"name":"neurodevelopmental disorder with cerebellar atrophy and with or without seizures","type":"exact"}],"termid":"MONDO:0020841","xrefs":{"Monarch":{"xref_id":"0020841"}}}


id: PBO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 3","termid":"PBO:0043314"}


id: MONDO:0033554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 73b with defective neutrophil chemotaxis and lymphopenia","secondary_identifiers":["MEDGEN:1740566","UMLS:C5436549","DOID:0112061","OMIM:618986"],"synonyms":[{"name":"IMD73B","type":"exact"},{"name":"immunodeficiency 73b with defective neutrophil chemotaxis and lymphopenia","type":"exact"}],"termid":"MONDO:0033554","xrefs":{"Monarch":{"xref_id":"0033554"}}}


id: MONDO:0012940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome 20q13.","definition_xrefs":["PMID:18758464","DOID:0110908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 24","secondary_identifiers":["OMIM:612566","MEDGEN:393404","MESH:C567252","UMLS:C2675509"],"synonyms":[{"name":"IBD24","type":"exact"},{"name":"inflammatory bowel disease 24","type":"exact"},{"name":"inflammatory bowel disease type 24","type":"exact"}],"termid":"MONDO:0012940","xrefs":{"Monarch":{"xref_id":"0012940"}}}


id: PBO:0056410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 7","termid":"PBO:0056410"}


id: PBO:0030841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenine_import","termid":"PBO:0030841"}


id: MONDO:0019756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lobar holoprosencephaly is the mildest classical form of holoprosencephaly (HPE) characterized by separation of the right and left cerebral hemispheres and lateral ventricules with some continuity across the frontal neocortex, especially rostrally and ventrally.","definition_xrefs":["Orphanet:93924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lobar holoprosencephaly","secondary_identifiers":["UMLS:C0431362","GARD:16830","icd11.foundation:121649206","MEDGEN:96559","SCTID:253136007"],"termid":"MONDO:0019756","xrefs":{"Monarch":{"xref_id":"0019756"}}}


id: PBO:0058345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4718","termid":"PBO:0058345"}


id: MONDO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM3 synthase deficiency is characterized by recurrent seizures (epilepsy) and problems with brain development. Within the first few weeks after birth, affected infants become irritable and develop feeding difficulties and vomiting that prevent them from growing and gaining weight at the usual rate. Seizures begin within the first year of life and worsen over time. Multiple types of seizures are possible, including generalized tonic-clonic seizures (also known as grand mal seizures), which cause muscle rigidity, convulsions, and loss of consciousness. Some affected children also experience prolonged episodes of seizure activity called nonconvulsive status epilepticus. The seizures associated with GM3 synthase deficiency tend to be resistant (refractory) to treatment with antiseizure medications.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0006025","MONDO:0002525"],"is_obsolete":false,"name":"GM3 synthase deficiency","secondary_identifiers":["UMLS:C1836824","Orphanet:370938","MEDGEN:323005","GARD:12059","Orphanet:171714","DOID:0060470","OMIM:609056","Orphanet:370933","SCTID:722762005"],"synonyms":[{"name":"Amish infantile epilepsy syndrome","type":"exact"},{"name":"GM3 synthase deficiency","type":"exact"},{"name":"SPDRS","type":"exact"},{"name":"ST3GAL5-CDG","type":"exact"},{"name":"disorder of lactosylceramide alpha-2,3-sialyltransferase activity","type":"exact"},{"name":"epilepsy syndrome, infantile-onset symptomatic","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome - developmental stagnation - blindness","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome-developmental stagnation-blindness syndrome","type":"exact"},{"name":"lactosylceramide alpha-2,3-sialyltransferase activity disease","type":"exact"},{"name":"salt & pepper syndrome","type":"exact"},{"name":"salt and pepper developmental regression syndrome","type":"exact"},{"name":"salt and pepper mental retardation syndrome","type":"related"},{"name":"salt-and-pepper syndrome","type":"exact"}],"termid":"MONDO:0018274","xrefs":{"Monarch":{"xref_id":"0018274"}}}


id: GO:0016480
data:
  {"annotated_genes":["SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95586],"is_not":false,"summary":null,"term":"GO:0016480"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase III.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase III","termid":"GO:0006359"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"negatively_regulates","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"negative regulation of transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transcription from RNA polymerase III promoter","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase III promoter","type":"exact"},{"name":"downregulation of transcription from RNA polymerase III promoter","type":"exact"},{"name":"inhibition of transcription from RNA polymerase III promoter","type":"narrow"},{"name":"negative regulation of transcription from Pol III promoter","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0016480","terms_by_termid":{"GO:0016480":null}}


id: PBO:0029413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G2/M_transition","termid":"PBO:0029413"}


id: MONDO:0005779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical syndrome that is usually caused by enterovirus infection, and that is characterized by fever, anorexia, and painful sores in the mouth, distal extremities, and/or other sites, including the buttocks.","definition_xrefs":["NCIT:C128439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coxsackievirus infectious disease","termid":"MONDO:0005721"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hand, foot and mouth disease","secondary_identifiers":["ICD9:074.3","MESH:D006232","SCTID:266108008","UMLS:C0018572","DOID:10881","EFO:0007294","MEDGEN:42330"],"synonyms":[{"name":"HFMD","type":"exact"},{"name":"hand foot and mouth disease","type":"exact"},{"name":"hand, foot, and mouth disease","type":"exact"},{"name":"vesicular stomatitis and exanthem","type":"exact"}],"termid":"MONDO:0005779","xrefs":{"Monarch":{"xref_id":"0005779"}}}


id: PBO:0048973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2 pseudogene 2","termid":"PBO:0048973"}


id: MONDO:0019814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Straddling or overriding tricuspid valve is a rare, congenital, tricuspid valve malformation characterized by the tricuspid valve that overrides the ventricular septum and communicates with both ventricles, as part of the tension apparatus of the valve crosses the ventricular septal defect and is attached in the left ventricle. The anomaly occurs with other congenital heart defects (transposition of great vessels, left ventricle outflow tract obstruction, double outlet right ventricle, hypoplastic right ventricle), which determine the main clinical manifestation.","definition_xrefs":["Orphanet:95461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"straddling or overriding tricuspid valve","secondary_identifiers":["GARD:19263","UMLS:C5761644","MEDGEN:1818564"],"termid":"MONDO:0019814","xrefs":{"Monarch":{"xref_id":"0019814"}}}


id: PBO:0084024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyoxylate reductase; acts on glyoxylate and hydroxypyruvate substrates; YPL113C is not an essential gene","termid":"PBO:0084024"}


id: PR:O14283
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor prr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.14","synonyms":[{"name":"Spom972h-prr1","type":"exact"},{"name":"pombe response regulator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14283"}


id: PBO:0078109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator of GLUT4 (SLC2A4) 1","termid":"PBO:0078109"}


id: MONDO:0015512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of hypertension that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic hypertension (obsolete MONDO:0015512)","secondary_identifiers":["Orphanet:156629"],"synonyms":[{"name":"genetic hypertension","type":"exact"},{"name":"genetic hypertensive disorder","type":"exact"}],"termid":"MONDO:0015512","xrefs":{"Monarch":{"xref_id":"0015512"}}}


id: MONDO:0016385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of hypogonadism due to primary gonadal failure, mitral valve prolapse, mild intellectual deficit and short stature.","definition_xrefs":["Orphanet:2233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadism-mitral valve prolapse-intellectual disability syndrome","secondary_identifiers":["UMLS:C2931685","GARD:1078","MEDGEN:444117","MESH:C537981","SCTID:721841001"],"synonyms":[{"name":"Cantalamessa Baldini Ambrosi syndrome","type":"related"},{"name":"Cantalamessa-Baldini-Ambrosi syndrome","type":"exact"},{"name":"primary gonadal failure, short stature, mitral valve prolapse, and intellectual disability","type":"related"},{"name":"primary gonadal failure, short stature, mitral valve prolapse, and mental retardation","type":"related"}],"termid":"MONDO:0016385","xrefs":{"Monarch":{"xref_id":"0016385"}}}


id: GO:0032621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-18 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-18 production","secondary_identifiers":["GO:0042241","GO:0072616"],"synonyms":[{"name":"IGIF production","type":"exact"},{"name":"IL-18 production","type":"exact"},{"name":"IL1F4 production","type":"narrow"},{"name":"interleukin-18 biosynthetic process","type":"narrow"},{"name":"interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032621"}


id: GO:0071424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in rRNA + S-adenosyl-L-methionine = an N(4)-methylcytidine in rRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:19965768","RHEA:62520","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (cytosine) methyltransferase activity","termid":"GO:0016434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"rRNA (cytosine-N4-)-methyltransferase activity","termid":"GO:0071424"}


id: MONDO:0011097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Axenfeld-Rieger syndrome that has material basis in deletions in the region 13q14.","definition_xrefs":["DOID:0110121","PMID:8751862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Axenfeld-Rieger syndrome","termid":"MONDO:0019187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Axenfeld-Rieger syndrome type 2","secondary_identifiers":["UMLS:C1832229","GARD:10517","MESH:C535680","MEDGEN:316937","OMIM:601499"],"synonyms":[{"name":"Axenfeld-Rieger syndrome, type 2","type":"related"},{"name":"RIEG2","type":"exact"},{"name":"Rieger syndrome type 2","type":"exact"},{"name":"Rieger syndrome, type 2","type":"related"}],"termid":"MONDO:0011097","xrefs":{"Monarch":{"xref_id":"0011097"}}}


id: PBO:0113248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl homoserine-O-acetyl serine sulfhydrylase; involved in methionine and cysteine biosynthesis; long considered essential for inorganic sulfur assimilation, but inefficient homocysteine synthase Hsu1p enables met17 null cells to assimilate enough inorganic sulfur for survival and proliferation; growth failure of met17 null can be explained by toxic accumulation of H2S gas due to a metabolic bottleneck","termid":"PBO:0113248"}


id: MONDO:0018109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fulminant viral hepatitis is a rapid and severe impairment of liver functions (acute liver failure) with hepatic encephalopathy developing less than 8 weeks after the onset of jaundice, secondary to viral hepatitis mainly due to HBV, but also to HAV.","definition_xrefs":["Orphanet:35063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"fulminant viral hepatitis","secondary_identifiers":["UMLS:C0276624","icd11.foundation:369649302","MedDRA:10019772","MEDGEN:547442","GARD:18812"],"termid":"MONDO:0018109","xrefs":{"Monarch":{"xref_id":"0018109"}}}


id: MONDO:0018527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteoclastic giant cell tumor of pancreas (obsolete MONDO:0018527)","termid":"MONDO:0018527","xrefs":{"Monarch":{"xref_id":"0018527"}}}


id: GO:0052778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diacetylchitobiose, the N,N'-diacetylated derivative of chitobiose.","definition_xrefs":["PMID:22797760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino disaccharide metabolic process","termid":"GO:0052779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diacetylchitobiose metabolic process","synonyms":[{"name":"diacetylchitobiose metabolism","type":"exact"}],"termid":"GO:0052778"}


id: PR:O74533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04865","PRO:DNx","PANTHER:PTHR12022:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.02c","secondary_identifiers":["UniProtKB:O74533"],"synonyms":[{"name":"Spom972h-UQCRB","type":"exact"},{"name":"complex III subunit 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase complex 14 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74533"}


id: MONDO:0700261
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  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[85253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"}]},"cv_name":"mondo","definition":"Any type 1 interferonopathies in which the cause of the disease is a variation in the ADAR gene. Individuals with variants in ADAR can present with a variety of phenotypes, including Aicardi-Goutieres syndrome and dyschromatosis symmetrica hereditaria.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy","termid":"MONDO:0700264"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"is_obsolete":false,"name":"ADAR-related type 1 interferonopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700261","terms_by_termid":{"MONDO:0007483":null,"MONDO:0014007":null},"xrefs":{"Monarch":{"xref_id":"0700261"}}}


id: GO:0015849
data:
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id: MONDO:0020692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive spondylocostal dysostosis","termid":"MONDO:0010180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0024322","MONDO:0005066","MONDO:0005497"],"is_obsolete":false,"name":"spondylocostal dysostosis 1, autosomal recessive","secondary_identifiers":["DOID:0112365","GARD:10726","OMIM:277300"],"synonyms":[{"name":"SCDO1","type":"related"},{"name":"spondylocostal dysostosis 1, autosomal recessive","type":"exact"},{"name":"spondylothoracic dysostosis","type":"related"},{"name":"spondylothoracic dysplasia","type":"related"},{"name":"vertebral anomalies","type":"related"}],"termid":"MONDO:0020692","xrefs":{"Monarch":{"xref_id":"0020692"}}}


id: PATO:0000513
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking sensitivity toward an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insensitive toward","synonyms":[{"name":"insensitive","type":"exact"},{"name":"resistant","type":"related"}],"termid":"PATO:0000513"}


id: PBO:0091654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane uricil/uridine transmembrane transporter transmembrane transporter family","termid":"PBO:0091654"}


id: PBO:0069931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1224, pseudogene","termid":"PBO:0069931"}


id: PBO:0049296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase kappa 1","termid":"PBO:0049296"}


id: GO:0034427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the mRNA transcript body that occurs when the 3' end is not protected by a 3'-poly(A) tail; degradation proceeds in the 3' to 5' direction.","definition_xrefs":["GOC:mah","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (obsolete GO:0034427)","termid":"GO:0034427"}


id: GO:0034889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan hemisulfate + H2O = endosulfan monoalcohol + 2 H+ + sulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan hemisulfate sulfatase activity (obsolete GO:0034889)","termid":"GO:0034889"}


id: MONDO:0025135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variety of tuberculosis affecting various birds, including chickens and ducks. It is caused by mycobacterium avium and characterized by tubercles consisting principally of epithelioid cells.","definition_xrefs":["MESH:D014379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"tuberculosis, non-human animal","termid":"MONDO:0700212"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculosis, avian","synonyms":[{"name":"Avian Tuberculoses","type":"related"},{"name":"Avian tuberculosis","type":"related"},{"name":"Tuberculoses, Avian","type":"related"}],"termid":"MONDO:0025135","xrefs":{"Monarch":{"xref_id":"0025135"}}}


id: GO:0032433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The end of a filopodium distal to the body of the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filopodium tip","termid":"GO:0032433"}


id: PBO:0040825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 3","termid":"PBO:0040825"}


id: PBO:0003322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase at the interface between RNA polymerase II and chaperone (predicted)","termid":"PBO:0003322"}


id: GO:0001925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of B-1 B cell differentiation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B-1 B cell differentiation","termid":"GO:0001924"},{"relation_name":"is_a","term_name":"negative regulation of B cell differentiation","termid":"GO:0045578"},{"relation_name":"negatively_regulates","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B-1 B cell differentiation","synonyms":[{"name":"down regulation of B-1 B cell differentiation","type":"exact"},{"name":"down-regulation of B-1 B cell differentiation","type":"exact"},{"name":"downregulation of B-1 B cell differentiation","type":"exact"},{"name":"inhibition of B-1 B cell differentiation","type":"narrow"},{"name":"negative regulation of B-1 B cell development","type":"related"},{"name":"negative regulation of B-1 B lymphocyte differentiation","type":"exact"},{"name":"negative regulation of B-1 B-cell differentiation","type":"exact"},{"name":"negative regulation of B-1 B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0001925"}


id: GO:0004206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-10 activity (obsolete GO:0004206)","synonyms":[{"name":"caspase-10 activity","type":"exact"}],"termid":"GO:0004206"}


id: GO:0019151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + NAD+ = D-galactono-1,4-lactone + NADH + H+.","definition_xrefs":["EC:1.1.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactose 1-dehydrogenase activity","secondary_identifiers":["RHEA:21296","MetaCyc:GALACTODEHYDROG-RXN"],"synonyms":[{"name":"D-galactose 1-dehydrogenase activity","type":"exact"},{"name":"D-galactose dehydrogenase activity","type":"related"},{"name":"D-galactose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"NAD-dependent D-galactose dehydrogenase activity","type":"related"},{"name":"beta-galactose dehydrogenase activity","type":"related"}],"termid":"GO:0019151"}


id: MONDO:1011649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch with subclavian artery and ligamentum arteriosum, non-human animal","secondary_identifiers":["OMIA:001570"],"termid":"MONDO:1011649","xrefs":{"Monarch":{"xref_id":"1011649"}}}


id: PBO:0081725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 653","termid":"PBO:0081725"}


id: MONDO:0032717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcified amelogenesis imperfecta","termid":"MONDO:0968955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, type 3C","secondary_identifiers":["DOID:0111722","MEDGEN:1676410","OMIM:618386","UMLS:C5193069"],"synonyms":[{"name":"AI3C","type":"related"},{"name":"AMELOGENESIS IMPERFECTA, TYPE IIIC","type":"related"},{"name":"Amelogenesis Imperfecta, Hypocalcification Type, Autosomal Recessive","type":"related"}],"termid":"MONDO:0032717","xrefs":{"Monarch":{"xref_id":"0032717"}}}


id: GO:0075525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which occurs as part of viral mRNA translation which allows expression of a downstream open reading frame (ORF) in a dicistronic mRNA. In this process, ribosomes translate the upstream ORF but following termination, a proportion of 40S subunits remain tethered to the mRNA and go on to re-initiate translation at the start codon of the downstream ORF.","definition_xrefs":["PMID:18631147","VZ:858","PMID:18824510","GOC:ch","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral translational termination-reinitiation","synonyms":[{"name":"termination reinitiation involved in viral translation","type":"exact"},{"name":"viral translation involving termination re-initiation","type":"exact"},{"name":"viral translation involving termination-reinitiation","type":"exact"},{"name":"viral translation involving translational stop-start","type":"exact"}],"termid":"GO:0075525"}


id: GO:0048581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-embryonic development","synonyms":[{"name":"down regulation of post-embryonic development","type":"exact"},{"name":"down-regulation of post-embryonic development","type":"exact"},{"name":"downregulation of post-embryonic development","type":"exact"},{"name":"inhibition of post-embryonic development","type":"narrow"}],"termid":"GO:0048581"}


id: PBO:0086316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to ABC transporter family members; lacks predicted membrane-spanning regions; transcriptionally activated by Yrm1p along with genes involved in multidrug resistance","termid":"PBO:0086316"}


id: GO:0002948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + 7-cyano-7-carbaguanine15 in tRNA + H2O = L-glutamate + archaeine15 in tRNA.","definition_xrefs":["PMID:20129918","RHEA:54084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"archaeosine synthase activity","secondary_identifiers":["Wikipedia:Archaeosine_synthase","EC:2.6.1.97"],"synonyms":[{"name":"ArcS","type":"related"},{"name":"glutamine:preQ0-tRNA amidinotransferase","type":"related"}],"termid":"GO:0002948"}


id: GO:0039503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the innate immune response of the host organism, the host's first line of defense.","definition_xrefs":["UniProtKB-KW:KW-1090","GOC:sp","GOC:bf","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host innate immune response (obsolete GO:0039503)","synonyms":[{"name":"inhibition of host innate immune response by virus","type":"exact"},{"name":"negative regulation by virus of host innate immune response","type":"exact"},{"name":"negative regulation by virus of host innate immunity","type":"exact"},{"name":"suppression by virus of host innate immunity","type":"exact"}],"termid":"GO:0039503"}


id: GO:1902369
data:
  {"annotated_genes":["SJAG_04946","SJAG_01331","SJAG_00797","SJAG_02573","SJAG_03696","SJAG_03283","SJAG_04586","SJAG_04825","SJAG_03883","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105468],"is_not":false,"summary":null,"term":"GO:1902369"},{"annotations":[78068,89399,99279,117438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[88692,95448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[88693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[88993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[90869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[89846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA catabolic process.","definition_xrefs":["PMID:16640457","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"negatively_regulates","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01331":null,"SJAG_02370":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04586":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA breakdown","type":"exact"},{"name":"down regulation of RNA catabolic process","type":"exact"},{"name":"down regulation of RNA catabolism","type":"exact"},{"name":"down regulation of RNA degradation","type":"exact"},{"name":"down-regulation of RNA breakdown","type":"exact"},{"name":"down-regulation of RNA catabolic process","type":"exact"},{"name":"down-regulation of RNA catabolism","type":"exact"},{"name":"down-regulation of RNA degradation","type":"exact"},{"name":"downregulation of RNA breakdown","type":"exact"},{"name":"downregulation of RNA catabolic process","type":"exact"},{"name":"downregulation of RNA catabolism","type":"exact"},{"name":"downregulation of RNA degradation","type":"exact"},{"name":"inhibition of RNA breakdown","type":"narrow"},{"name":"inhibition of RNA catabolic process","type":"narrow"},{"name":"inhibition of RNA catabolism","type":"narrow"},{"name":"inhibition of RNA degradation","type":"narrow"},{"name":"negative regulation of RNA breakdown","type":"exact"},{"name":"negative regulation of RNA catabolism","type":"exact"},{"name":"negative regulation of RNA degradation","type":"exact"}],"termid":"GO:1902369","terms_by_termid":{"GO:0048255":null,"GO:0060212":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null,"GO:1902373":null}}


id: PBO:0060789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFC2-KCTD14 readthrough","termid":"PBO:0060789"}


id: GO:0019801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclization of asparagine to yield an L-aspartimide (otherwise known as alpha-aminosuccinimide) residue at the C-terminus of an excised intein during protein splicing.","definition_xrefs":["RESID:AA0302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"part_of","term_name":"intein-mediated protein splicing","termid":"GO:0016539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0044281","GO:0010467","GO:0006520"],"is_obsolete":false,"name":"cyclization of asparagine involved in intein-mediated protein splicing","synonyms":[{"name":"cyclization of asparagine, during protein splicing","type":"related"}],"termid":"GO:0019801"}


id: PBO:0091921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf10","termid":"PBO:0091921"}


id: PBO:0075841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 2","termid":"PBO:0075841"}


id: MONDO:0025431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infectious diseases of cattle, sheep, and goats, characterized by blepharospasm, lacrimation, conjunctivitis, and varying degrees of corneal opacity and ulceration. In cattle the causative agent is moraxella (moraxella) bovis; in sheep, mycoplasma; rickettsia; chlamydia; or acholeplasma; in goats, rickettsia.","definition_xrefs":["MESH:D007639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"goat disease","termid":"MONDO:0025003"},{"relation_name":"is_a","term_name":"keratoconjunctivitis, non-human animal","termid":"MONDO:1011329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoconjunctivitis, infectious","synonyms":[{"name":"Keratoconjunctivitides, infectious","type":"related"},{"name":"infectious Keratoconjunctivitides","type":"related"},{"name":"infectious keratoconjunctivitis","type":"related"}],"termid":"MONDO:0025431","xrefs":{"Monarch":{"xref_id":"0025431"}}}


id: GO:0050308
data:
  {"annotated_genes":["SJAG_05314","SJAG_02713","SJAG_00039","SJAG_01646","SJAG_01862","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99139,88183,88900,75328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004331"},{"annotations":[96337,91054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sugar phosphate + H2O = sugar + phosphate.","definition_xrefs":["MetaCyc:SUGAR-PHOSPHATASE-RXN","EC:3.1.3.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate phosphatase activity","termid":"GO:0019203"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00685":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"sugar-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00804"],"synonyms":[{"name":"sugar-phosphate phosphatase activity","type":"exact"},{"name":"sugar-phosphate phosphohydrolase activity","type":"exact"}],"termid":"GO:0050308","terms_by_termid":{"GO:0004331":null,"GO:0004805":null}}


id: PBO:0027881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_trimethylation","termid":"PBO:0027881"}


id: GO:2000370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of clathrin-mediated endocytosis.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"is_a","term_name":"regulation of clathrin-dependent endocytosis","termid":"GO:2000369"},{"relation_name":"positively_regulates","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of clathrin-dependent endocytosis","synonyms":[{"name":"positive regulation of clathrin coated pit-dependent endocytosis","type":"exact"},{"name":"positive regulation of clathrin-mediated endocytosis","type":"exact"}],"termid":"GO:2000370"}


id: MONDO:0007885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hip region disease that is characterized by uni- or bilateral avascular necrosis (AVN) of the femoral head in children. In a small percentage of cases, mutations in the COL2A1 gene were found to be responsible.","definition_xrefs":["Orphanet:2380","GARD:0006874"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete type 2 collagen-related bone disorder (obsolete MONDO:0019686)","termid":"MONDO:0019686"},{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"},{"relation_name":"is_a","term_name":"dysplasia of the proximal femoral epiphyses","termid":"MONDO:1030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Legg-Calve-Perthes disease","secondary_identifiers":["MEDGEN:730669","MESH:D007873","GARD:6874","NORD:1353","OMIM:150600","MedDRA:10034735","UMLS:C1442965","DOID:14415","SCTID:15739006","NCIT:C34766"],"synonyms":[{"name":"Calve - Perthes' disease","type":"exact"},{"name":"LCPD","type":"related"},{"name":"Lcp","type":"related"},{"name":"Legg Calvé Perthes Disease","type":"exact"},{"name":"Legg-CALVE-Perthes disease","type":"exact"},{"name":"Legg-Calve-Perthes disease","type":"exact"},{"name":"Legg-Calve-Perthes symptom","type":"exact"},{"name":"Legg-Calve-Perthes syndrome","type":"exact"},{"name":"Legg-Calvé-Perthes disease","type":"exact"},{"name":"Legg-Perthes disease","type":"exact"},{"name":"Osteochondrosis of the capital femoral epiphysis","type":"exact"},{"name":"Perthe's disease","type":"exact"},{"name":"Perthes disease","type":"exact"},{"name":"Pseudocoxalgia","type":"exact"},{"name":"aseptic necrosis of the capital femoral epiphysis","type":"exact"},{"name":"coxa plana","type":"exact"},{"name":"juvenile osteochond-hip/pelvis","type":"exact"},{"name":"juvenile osteochondrosis of hip and pelvis","type":"exact"},{"name":"juvenile osteochondrosis of hip and/or pelvis","type":"exact"},{"name":"osteochondritis deformans","type":"related"},{"name":"osteochondritis of the capital femoral epiphysis","type":"exact"},{"name":"osteochondrosis of Legg-Calve-Perthes","type":"exact"},{"name":"pseudocoxalgia","type":"exact"}],"termid":"MONDO:0007885","xrefs":{"Monarch":{"xref_id":"0007885"}}}


id: GO:0015176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall of bacteria, where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded, these enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some catalyze export of nucleases.","definition_xrefs":["TC:1.A.38.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete holin (obsolete GO:0015176)","synonyms":[{"name":"holin","type":"exact"}],"termid":"GO:0015176"}


id: PBO:0048015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM and PDZ domain containing 3","termid":"PBO:0048015"}


id: GO:0099009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The circularization of a viral genome following infection of a host cell. This is common amongst bacterial viruses to protect the viral genome ends from nucleases, to convert the linear genome to an integrative precursor or to give rise to the replicative form of the genome. It can be mediated by covalent closure of the DNA sticky ends, recombinaison between redundant terminal sequences or via the binding of a protein at the viral DNA extremities.","definition_xrefs":["PMID:15489417","PMID:19523475","PMID:11894948","PMID:319596","VZ:3968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome circularization","termid":"GO:0099009"}


id: PBO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 3","termid":"PBO:0043310"}


id: GO:0102740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: theobromine + S-adenosyl-L-methionine = H+ + caffeine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity (obsolete GO:0102740)","termid":"GO:0102740"}


id: PBO:0038518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCF2-H2BK1 readthrough","termid":"PBO:0038518"}


id: MONDO:1011070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in long-tailed chinchilla.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, long-tailed chinchilla","secondary_identifiers":["OMIA:001033-34839"],"termid":"MONDO:1011070","xrefs":{"Monarch":{"xref_id":"1011070"}}}


id: MONDO:0035008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated splenic vein thrombosis","secondary_identifiers":["GARD:22338","Orphanet:583856","UMLS:C0272416","MEDGEN:544034","icd11.foundation:121618859"],"termid":"MONDO:0035008","xrefs":{"Monarch":{"xref_id":"0035008"}}}


id: GO:1901400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta3 activation (obsolete GO:1901400)","synonyms":[{"name":"activation of TGF-beta 3 activation","type":"exact"},{"name":"activation of TGFB3 activation","type":"exact"},{"name":"activation of TGFbeta 3 activation","type":"exact"},{"name":"activation of transforming growth factor beta3 activation","type":"narrow"},{"name":"positive regulation of TGF-beta 3 activation","type":"exact"},{"name":"positive regulation of TGFB3 activation","type":"exact"},{"name":"positive regulation of TGFbeta 3 activation","type":"exact"},{"name":"up regulation of TGF-beta 3 activation","type":"exact"},{"name":"up regulation of TGFB3 activation","type":"exact"},{"name":"up regulation of TGFbeta 3 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"up-regulation of TGF-beta 3 activation","type":"exact"},{"name":"up-regulation of TGFB3 activation","type":"exact"},{"name":"up-regulation of TGFbeta 3 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"upregulation of TGF-beta 3 activation","type":"exact"},{"name":"upregulation of TGFB3 activation","type":"exact"},{"name":"upregulation of TGFbeta 3 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta3 activation","type":"exact"}],"termid":"GO:1901400"}


id: PBO:0086825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL050c is not an essential gene","termid":"PBO:0086825"}


id: PBO:0068921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 164, pseudogene","termid":"PBO:0068921"}


id: GO:0048001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-erythrose 4-phosphate + H2O + NAD+ = 4-phospho-D-erythronate + 2 H+ + NADH.","definition_xrefs":["EC:1.2.1.72","RHEA:12056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"erythrose-4-phosphate dehydrogenase activity","secondary_identifiers":["MetaCyc:ERYTH4PDEHYDROG-RXN","GO:0033724","KEGG_REACTION:R01825"],"synonyms":[{"name":"D-erythrose 4-phosphate:NAD+ oxidoreductase activity","type":"related"},{"name":"E4P dehydrogenase activity","type":"related"},{"name":"E4PDH","type":"related"},{"name":"Epd dehydrogenase activity","type":"related"},{"name":"GapB","type":"related"},{"name":"erythrose 4-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0048001"}


id: GO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hypochlorous acid.","definition_xrefs":["PMID:10085024","GOC:add","PMID:176150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"},{"relation_name":"is_a","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hypochlorous acid metabolic process","synonyms":[{"name":"HClO metabolic process","type":"exact"},{"name":"HOCl metabolic process","type":"exact"},{"name":"hypochlorite metabolic process","type":"related"},{"name":"hypochlorous acid metabolism","type":"exact"}],"termid":"GO:0002148"}


id: GO:0071296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotin","termid":"GO:0070781"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotin","synonyms":[{"name":"cellular response to Bios IIB","type":"exact"},{"name":"cellular response to coenzyme R","type":"exact"},{"name":"cellular response to vitamin B7","type":"exact"},{"name":"cellular response to vitamin H","type":"exact"}],"termid":"GO:0071296"}


id: PBO:0114296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing protein Dbl1, implicated in DNA repair","termid":"PBO:0114296"}


id: GO:0036354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a = bacteriochlorophyllide a + 2 H+.","definition_xrefs":["PMID:8437569","GOC:crds","MetaCyc:RXN-8787","InterPro:IPR005903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase activity","secondary_identifiers":["RHEA:19733"],"termid":"GO:0036354"}


id: MONDO:0011455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lissencephaly, familial, with cleft palate and cerebellar hypoplasia","secondary_identifiers":["MESH:C565781","OMIM:604382","MEDGEN:348938","UMLS:C1858419"],"synonyms":[{"name":"lissencephaly, familial, with cleft palate and cerebellar hypoplasia","type":"exact"}],"termid":"MONDO:0011455","xrefs":{"Monarch":{"xref_id":"0011455"}}}


id: MONDO:0032827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 16","secondary_identifiers":["MEDGEN:1684869","OMIM:618596","UMLS:C5231421"],"synonyms":[{"name":"EIG16","type":"exact"}],"termid":"MONDO:0032827","xrefs":{"Monarch":{"xref_id":"0032827"}}}


id: GO:0072476
data:
  {"annotated_genes":["SJAG_04140","SJAG_03048","SJAG_01837","SJAG_00082","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89205,93001,101565,115812,110345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[89210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle spindle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to spindle checkpoint signaling","termid":"GO:0072417"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic spindle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic cell cycle spindle checkpoint effector process","type":"exact"},{"name":"response to mitotic cell cycle spindle checkpoint signaling","type":"exact"},{"name":"response to signal involved in mitotic cell cycle spindle checkpoint","type":"exact"}],"termid":"GO:0072476","terms_by_termid":{"GO:0072479":null,"GO:0140429":null}}


id: FYPO:0007842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is absent.","definition_xrefs":["PMID:34019809","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"abolished NAT activity","type":"related"},{"name":"abolished protein N-terminal acetyltransferase activity","type":"exact"},{"name":"peptide alpha-N-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007842"}


id: PBO:0064279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M1","termid":"PBO:0064279"}


id: PBO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex subunit Erf4 (predicted)","termid":"PBO:0001758"}


id: PBO:0038949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenin","termid":"PBO:0038949"}


id: PBO:0000099
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"from","termid":"PBO:0000099"}


id: GO:0031524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving menthol, the monoterpene 2-isopropyl-5-methylcyclohexanol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"menthol metabolic process","synonyms":[{"name":"menthol metabolism","type":"exact"}],"termid":"GO:0031524"}


id: PBO:0089815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome passenger complex subunit, INCENP ortholog Pic1","termid":"PBO:0089815"}


id: GO:0010835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein ADP-ribosylation. Protein ADP-ribosylation is the transfer, from NAD, of ADP-ribose to protein amino acids.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein ADP-ribosylation","synonyms":[{"name":"regulation of protein amino acid ADP-ribosylation","type":"exact"}],"termid":"GO:0010835"}


id: PBO:0046284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EML2 antisense RNA 1","termid":"PBO:0046284"}


id: GO:0089717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a membrane consisting of gene products and protein complexes that have some part that spans both leaflets of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete spanning component of membrane (obsolete GO:0089717)","termid":"GO:0089717"}


id: PBO:0084757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix protein involved in Fe-S cluster biogenesis; facilitates [4Fe-2S] cluster inception into mitochondrial proteins such as lipoate synthase and succinate dehydrogenase; interacts and may function with Grx5p at an early step in Fe-S cluster biosynthesis; forms dimeric complexes with Grx5p and Nfu1p that alter the stability of shared Fe/S clusters; sequence similarity to human BOLA family member, BOLA1 and S. pombe uvi31, a putative DNA repair protein","termid":"PBO:0084757"}


id: PBO:0060868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 11","termid":"PBO:0060868"}


id: GO:0000302
data:
  {"annotated_genes":["SJAG_00141","SJAG_04823","SJAG_03303","SJAG_04953","SJAG_05181","SJAG_00668","SJAG_04632","SJAG_04403","SJAG_04399","SJAG_02515","SJAG_01199","SJAG_03653","SJAG_04788","SJAG_01734","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107983,104203,99187,116498,117413,94389],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[99188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[68171,88611,98468,99344,109240,57866,88191,109284,64716,92334],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00668":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to reactive oxygen species","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"response to AOS","type":"exact"},{"name":"response to ROI","type":"exact"},{"name":"response to ROS","type":"exact"},{"name":"response to active oxygen species","type":"exact"},{"name":"response to reactive oxidative species","type":"exact"},{"name":"response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:0000302","terms_by_termid":{"GO:0019430":null,"GO:0034614":null,"GO:0061692":null}}


id: PR:Q10181
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rit1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3F10.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.06c","synonyms":[{"name":"Spom972h-rit1","type":"exact"}],"termid":"PR:Q10181"}


id: PATO:0001415
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a population by virtue of the proportion of its members that are ill at a given time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"population quality","termid":"PATO:0002003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morbidity","termid":"PATO:0001415"}


id: PBO:0039621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A4","termid":"PBO:0039621"}


id: GO:0036413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline at position 26 in histone H3.","definition_xrefs":["PMID:22853951","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R26 citrullination (obsolete GO:0036413)","synonyms":[{"name":"histone H3 arginine 26 citrullination","type":"exact"}],"termid":"GO:0036413"}


id: PATO:0002016
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnitude","termid":"PATO:0002016"}


id: MONDO:0019621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic pneumonitis of infancy is a rare pediatric form of interstitial lung disease (ILD).","definition_xrefs":["Orphanet:91359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic pneumonitis of infancy","secondary_identifiers":["SCTID:708026002","MEDGEN:846677","UMLS:C3872848","icd11.foundation:1821220054","GARD:19166"],"synonyms":[{"name":"CPI","type":"exact"}],"termid":"MONDO:0019621","xrefs":{"Monarch":{"xref_id":"0019621"}}}


id: GO:1904523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA amplification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26195783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA amplification","termid":"GO:1904523"}


id: PBO:0091483
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription decreased","termid":"PBO:0091483"}


id: PBO:0084929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA binding protein, member of the CCCH zinc finger family; similar to mammalian Tis11 protein, which activates transcription and also has a role in mRNA degradation; functions with Tis11p in regulation of iron homeostasis; CTH1 has a paralog, TIS11, that arose from the whole genome duplication","termid":"PBO:0084929"}


id: MONDO:0800040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTND6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTND6","synonyms":[{"name":"MTND6 MELAS syndrome","type":"exact"}],"termid":"MONDO:0800040","xrefs":{"Monarch":{"xref_id":"0800040"}}}


id: GO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ferrocytochrome c + hydrogen peroxide = 2 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.11.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cytochrome-c peroxidase activity","secondary_identifiers":["RHEA:16581","MetaCyc:CYTOCHROME-C-PEROXIDASE-RXN"],"synonyms":[{"name":"apocytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c-551 peroxidase activity","type":"related"},{"name":"cytochrome c-H2O oxidoreductase activity","type":"related"},{"name":"cytochrome peroxidase activity","type":"related"},{"name":"ferrocytochrome-c:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"mesocytochrome c peroxidase azide","type":"related"},{"name":"mesocytochrome c peroxidase cyanate","type":"related"},{"name":"mesocytochrome c peroxidase cyanide","type":"related"}],"termid":"GO:0004130"}


id: GO:0098876
data:
  {"annotated_genes":["SJAG_03838","SJAG_00858","SJAG_01382","SJAG_01135","SJAG_00314","SJAG_04609","SJAG_03754","SJAG_00379","SJAG_02753","SJAG_03756","SJAG_03250","SJAG_03915","SJAG_01114","SJAG_00330","SJAG_00669","SJAG_02282","SJAG_03938","SJAG_01335","SJAG_01516","SJAG_04358","SJAG_00916","SJAG_02231","SJAG_00430","SJAG_04565","SJAG_02240","SJAG_01945","SJAG_00826","SJAG_02320","SJAG_00144","SJAG_03864","SJAG_04509","SJAG_03970","SJAG_02811","SJAG_04846","SJAG_02912","SJAG_04044","SJAG_02177","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103995,99375,98891,72410,114857,114778,111628,111591,108328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032456"},{"annotations":[112138,111918,90496,117622,118008,106527,91487,94092,100315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[97913,106202,107947,90372,112140,106308,105573,94342,108735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[99103,98956,112996,116855,105455,114780,106545,87833,91475,100034,117960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006893"},{"annotations":[87301],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[87110],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2001135"}]},"cv_name":"biological_process","definition":"The directed movement of substances to the plasma membrane in transport vesicles that fuse with the plasma membrane by exocytosis.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00314":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00430":null,"SJAG_00669":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01135":null,"SJAG_01335":null,"SJAG_01382":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_01945":null,"SJAG_02177":null,"SJAG_02231":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03754":null,"SJAG_03756":null,"SJAG_03838":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_03970":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle-mediated transport to the plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098876","terms_by_termid":{"GO:0006893":null,"GO:0032456":null,"GO:0042997":null,"GO:0043001":null,"GO:0099638":null,"GO:2001135":null}}


id: GO:0018815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon + H2O = 2-oxobut-3-enanoate + 2,5,6-trihydroxy-3-methylpyridine.","definition_xrefs":["MetaCyc:RXN-645","UM-BBD_reactionID:r0051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon hydratase-aldolase activity","termid":"GO:0018815"}


id: SO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multi-chromosome deficiency aberration generated by reassortment of other aberration components.","definition_xrefs":["FB:gm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assortment_derived_variation","termid":"SO:0001504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_deficiency","synonyms":[{"name":"assortment-derived deficiency","type":"exact"}],"termid":"SO:0000802"}


id: FYPO:0007558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing econazole.","definition_xrefs":["PomBase:mah","PMID:33223513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on econazole","synonyms":[{"name":"normal cell population growth in presence of econazole","type":"exact"},{"name":"normal cell population growth on ECZ","type":"exact"},{"name":"normal cell population growth on econazole","type":"exact"},{"name":"normal cellular response to econazole","type":"related"},{"name":"normal vegetative cell population growth on econazole","type":"exact"}],"termid":"FYPO:0007558"}


id: GO:0008950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete p-aminobenzoate synthetase (obsolete GO:0008950)","synonyms":[{"name":"p-aminobenzoate synthetase","type":"exact"}],"termid":"GO:0008950"}


id: PBO:0084180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone; involved in regulation of chromatin structure in both transcribed and silenced chromosomal regions; affects transcriptional elongation; has a role in regulation of Ty1 transposition; interacts physically and functionally with Chromatin Assembly Factor-1 (CAF-1)","termid":"PBO:0084180"}


id: PBO:0012543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_on_population_of","termid":"PBO:0012543"}


id: PBO:0082946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic isoleucine-tRNA synthetase; target of the G1-specific inhibitor reveromycin A","termid":"PBO:0082946"}


id: PBO:0017464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_gene_product","termid":"PBO:0017464"}


id: GO:0141085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141085"}


id: GO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose binding lectin (obsolete GO:0005531)","synonyms":[{"name":"galactose binding lectin","type":"exact"}],"termid":"GO:0005531"}


id: PBO:0048710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 2","termid":"PBO:0048710"}


id: PR:Q9UT83
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug28 gene.","definition_xrefs":["UniProtKB:Q9UT83","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 28 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.07","synonyms":[{"name":"Spom972h-mug28","type":"exact"}],"termid":"PR:Q9UT83"}


id: MONDO:1010058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exocrine pancreatic insufficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocrine pancreatic insufficiency, non-human animal","secondary_identifiers":["OMIA:000765"],"termid":"MONDO:1010058","xrefs":{"Monarch":{"xref_id":"1010058"}}}


id: GO:0050460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH3 + NAD+ + H2O = hydroxylamine + NADH + H+.","definition_xrefs":["EC:1.7.1.10","MetaCyc:HYDROXYLAMINE-REDUCTASE-NADH-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxylamine reductase (NADH) activity","secondary_identifiers":["RHEA:20581"],"synonyms":[{"name":"N-hydroxy amine reductase activity","type":"related"},{"name":"NADH-hydroxylamine reductase activity","type":"related"},{"name":"NADH2:hydroxylamine oxidoreductase activity","type":"related"},{"name":"NADH:hydroxylamine oxidoreductase activity","type":"related"},{"name":"ammonium dehydrogenase activity","type":"related"},{"name":"ammonium:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxylamine reductase (NADH2)","type":"related"}],"termid":"GO:0050460"}


id: PBO:0036179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_at_Ser/Thr-Pro_site_during_vegetative_growth","termid":"PBO:0036179"}


id: MONDO:0001344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neonatal diabetes mellitus (obsolete MONDO:0001344)","termid":"MONDO:0001344","xrefs":{"Monarch":{"xref_id":"0001344"}}}


id: MOD:00501
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of a residue with two iodine atoms.","definition_xrefs":["Unimod:130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodinated residue","termid":"MOD:00755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diiodinated residue","synonyms":[{"name":"Diiodo","type":"related"},{"name":"I2Res","type":"exact"},{"name":"di-Iodination","type":"related"}],"termid":"MOD:00501"}


id: MONDO:0003569
data:
  {"annotated_genes":["SJAG_01179","SJAG_01630","SJAG_00885","SJAG_02848","SJAG_MIT13","SJAG_04522","SJAG_02656","SJAG_03957","SJAG_06022","SJAG_02278","SJAG_02384","SJAG_01114","SJAG_04816","SJAG_02658","SJAG_04183","SJAG_04765","SJAG_MIT15","SJAG_01816","SJAG_02007","SJAG_02641","SJAG_02050","SJAG_04665","SJAG_04376","SJAG_MIT03","SJAG_04003","SJAG_03972","SJAG_03588"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008134"},{"annotations":[84597,84599,84598,84600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011444"},{"annotations":[85991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"},{"annotations":[84775,84773,84774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[84357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[85127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020737"},{"annotations":[86060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015011"},{"annotations":[84614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033549"},{"annotations":[85004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008135"},{"annotations":[85487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957935"},{"annotations":[85282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957978"},{"annotations":[84692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008133"},{"annotations":[84901,84900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012543"},{"annotations":[84666,84665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014571"},{"annotations":[85853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007429"},{"annotations":[85758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[84389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[84760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[85573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[84352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[85644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[85286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","definition":"A neoplastic or non-neoplastic disorder that affects one of the cranial nerves.","definition_xrefs":["NCIT:C26733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_01114":null,"SJAG_01179":null,"SJAG_01630":null,"SJAG_01816":null,"SJAG_02007":null,"SJAG_02050":null,"SJAG_02278":null,"SJAG_02384":null,"SJAG_02641":null,"SJAG_02656":null,"SJAG_02658":null,"SJAG_02848":null,"SJAG_03588":null,"SJAG_03957":null,"SJAG_03972":null,"SJAG_04003":null,"SJAG_04183":null,"SJAG_04376":null,"SJAG_04522":null,"SJAG_04665":null,"SJAG_04765":null,"SJAG_04816":null,"SJAG_06022":null,"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"is_obsolete":false,"name":"cranial nerve neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:352.9","MEDGEN:1160","SCTID:73013002","UMLS:C0010266","MESH:D003389","DOID:5656"],"synonyms":[{"name":"cranial nerve disease","type":"exact"},{"name":"cranial nerve disorder","type":"exact"},{"name":"cranial neuron projection bundle disease","type":"exact"},{"name":"cranial neuron projection bundle disease or disorder","type":"exact"},{"name":"cranial neuropathy","type":"exact"},{"name":"disease of cranial neuron projection bundle","type":"exact"},{"name":"disease or disorder of cranial neuron projection bundle","type":"exact"},{"name":"disorder of cranial nerve","type":"exact"},{"name":"disorder of cranial neuron projection bundle","type":"exact"}],"termid":"MONDO:0003569","terms_by_termid":{"MONDO:0007429":null,"MONDO:0008133":null,"MONDO:0008134":null,"MONDO:0008135":null,"MONDO:0009783":null,"MONDO:0010788":null,"MONDO:0010912":null,"MONDO:0011444":null,"MONDO:0012238":null,"MONDO:0012543":null,"MONDO:0013117":null,"MONDO:0014062":null,"MONDO:0014571":null,"MONDO:0014656":null,"MONDO:0015011":null,"MONDO:0020737":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0033549":null,"MONDO:0957935":null,"MONDO:0957978":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0003569"}}}


id: PBO:0071810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 5","termid":"PBO:0071810"}


id: PBO:0070340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 13","termid":"PBO:0070340"}


id: PBO:0041943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 4","termid":"PBO:0041943"}


id: PBO:0090816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster protein, implicated in respiratory complex assembly","termid":"PBO:0090816"}


id: PBO:0063219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 8 pseudogene 1","termid":"PBO:0063219"}


id: GO:0008881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate = D-glutamate.","definition_xrefs":["RHEA:12813","EC:5.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamate racemase activity","secondary_identifiers":["MetaCyc:GLUTRACE-RXN","KEGG_REACTION:R00260"],"termid":"GO:0008881"}


id: PBO:0054108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1473","termid":"PBO:0054108"}


id: GO:0042093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized thymocyte acquires specialized features of a T-helper cell.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","termid":"GO:0002294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper cell differentiation","synonyms":[{"name":"T-helper cell development","type":"related"},{"name":"helper T cell differentiation","type":"exact"}],"termid":"GO:0042093"}


id: MONDO:0008537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"telecanthus","secondary_identifiers":["GARD:19505","MESH:C562941","UMLS:C0423113","icd11.foundation:210416501","OMIM:187350","MEDGEN:140836","Orphanet:98575"],"synonyms":[{"name":"telecanthus","type":"exact"}],"termid":"MONDO:0008537","xrefs":{"Monarch":{"xref_id":"0008537"}}}


id: GO:0080069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylthioheptyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 7-methylthioheptyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"gene_count":0,"genotype_count":0,"name":"obsolete 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity (obsolete GO:0080069)","termid":"GO:0080069"}


id: PBO:0061866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteomodulin","termid":"PBO:0061866"}


id: PR:Q09173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.07c","synonyms":[{"name":"PP2C-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ptc3","type":"exact"}],"termid":"PR:Q09173"}


id: PBO:0040654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal body orientation factor 1","termid":"PBO:0040654"}


id: GO:0015575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mannitol from one side of a membrane to the other. Mannitol is the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mannitol transmembrane transporter activity","secondary_identifiers":["GO:0015586"],"synonyms":[{"name":"mannitol permease activity","type":"exact"}],"termid":"GO:0015575"}


id: PBO:0078713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 2-1","termid":"PBO:0078713"}


id: PBO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase (predicted)","termid":"PBO:0000761"}


id: MONDO:0008387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring dermoid of cornea is characterized by annular limbal dermoids (growths with a skin-like structure) with corneal and conjunctival extension. Less than 30 cases have been described. Transmission is autosomal dominant and mutations in the PITX2 gene have been suggested as a potential cause of the condition.","definition_xrefs":["Orphanet:91481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ring dermoid of cornea","secondary_identifiers":["DOID:0111548","GARD:9696","icd11.foundation:271430543","MEDGEN:357922","MESH:C535684","OMIM:180550","SCTID:723499000","UMLS:C1867155"],"synonyms":[{"name":"RDC","type":"related"},{"name":"RING dermoid of cornea","type":"related"},{"name":"Ring dermoid syndrome","type":"exact"},{"name":"bilateral, annular limbal dermoids with corneal and conjunctival extension","type":"related"},{"name":"ring dermoid of cornea","type":"exact"}],"termid":"MONDO:0008387","xrefs":{"Monarch":{"xref_id":"0008387"}}}


id: PBO:0114382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane carboxylic acid transmembrane transporter Tna1","termid":"PBO:0114382"}


id: PBO:0069244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 499, pseudogene","termid":"PBO:0069244"}


id: MONDO:0001430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal neovascularization","termid":"MONDO:0006713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"deep corneal vascularisation","secondary_identifiers":["ICD9:370.63","UMLS:C0155095","DOID:12087","MEDGEN:509784","SCTID:2102007"],"synonyms":[{"name":"deep vascularization of cornea","type":"exact"}],"termid":"MONDO:0001430","xrefs":{"Monarch":{"xref_id":"0001430"}}}


id: PBO:0034296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_endoparasite","termid":"PBO:0034296"}


id: GO:0008864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + H2O = (6S)-5,6,7,8-tetrahydrofolate + formate + H+.","definition_xrefs":["EC:3.5.1.10","RHEA:19833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"formyltetrahydrofolate deformylase activity","secondary_identifiers":["KEGG_REACTION:R00944","MetaCyc:FORMYLTHFDEFORMYL-RXN"],"synonyms":[{"name":"10-formyltetrahydrofolate amidohydrolase activity","type":"related"},{"name":"formyl-FH(4) hydrolase activity","type":"related"},{"name":"formyltetrahydrofolate hydrolase activity","type":"related"}],"termid":"GO:0008864"}


id: PBO:0110384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3121","termid":"PBO:0110384"}


id: PR:O42938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 6-phosphofructokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.02","synonyms":[{"name":"ATP-PFK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphofructokinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphohexokinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pfk1","type":"exact"}],"termid":"PR:O42938"}


id: GO:0043548
data:
  {"annotated_genes":["SJAG_01876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75921],"is_not":false,"summary":null,"term":"GO:0043548"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylinositol 3-kinase, any enzyme that catalyzes the addition of a phosphate group to an inositol lipid at the 3' position of the inositol ring.","definition_xrefs":["PMID:10209156","PMID:9255069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PI3K binding","type":"exact"},{"name":"phosphoinositide 3-kinase binding","type":"exact"}],"termid":"GO:0043548","terms_by_termid":{"GO:0043548":null}}


id: GO:0071366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an indolebutyric acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to auxin stimulus","termid":"GO:0071365"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to indolebutyric acid","termid":"GO:0080026"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to indolebutyric acid stimulus","synonyms":[{"name":"cellular response to IBA stimulus","type":"exact"},{"name":"cellular response to indole-3-butyric acid stimulus","type":"narrow"}],"termid":"GO:0071366"}


id: GO:0000001
data:
  {"annotated_genes":["SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101946],"is_not":false,"summary":null,"term":"GO:0000001"}]},"cv_name":"biological_process","definition":"The distribution of mitochondria, including the mitochondrial genome, into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["PMID:10873824","PMID:11389764","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"},{"relation_name":"is_a","term_name":"mitochondrion distribution","termid":"GO:0048311"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrion inheritance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial inheritance","type":"exact"}],"termid":"GO:0000001","terms_by_termid":{"GO:0000001":null}}


id: MONDO:0800045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome, familial, Behcet-like","termid":"MONDO:0031384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome, familial, Behcet-like 1","secondary_identifiers":["UMLS:C4225218","MEDGEN:898541","DOID:0080944","GARD:17848","OMIM:616744","Orphanet:476102","Orphanet:674762"],"synonyms":[{"name":"AISBL","type":"broad"},{"name":"Behçet-like disease due to HA20","type":"exact"},{"name":"Behçet-like disease due to haploinsufficiency of A20","type":"exact"},{"name":"autoinflammatory syndrome, familial, Behcet-like","type":"broad"},{"name":"autoinflammatory syndrome, familial, Behcet-like 1","type":"exact"},{"name":"hereditary paediatric Behçet-like disease","type":"exact"},{"name":"hereditary pediatric Behçet-like disease","type":"exact"}],"termid":"MONDO:0800045","xrefs":{"Monarch":{"xref_id":"0800045"}}}


id: PBO:0066414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAD and GEM like GTPase 2","termid":"PBO:0066414"}


id: GO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a component of the complement pathway binding to a complement receptor. Such components include both whole complement proteins and fragments of complement proteins generated through the activity of the complement pathway.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating cell surface receptor signaling pathway","termid":"GO:0002429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"complement receptor mediated signaling pathway","synonyms":[{"name":"complement receptor mediated signalling pathway","type":"exact"},{"name":"immune response-regulating cell surface receptor signalling pathway","type":"broad"}],"termid":"GO:0002430"}


id: PBO:0074840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 33","termid":"PBO:0074840"}


id: GO:0070831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane organization","termid":"GO:0071711"},{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"basement membrane assembly","termid":"GO:0070831"}


id: PBO:0079160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN18 antisense RNA 1","termid":"PBO:0079160"}


id: PBO:0088379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokinetic formin Cdc12","termid":"PBO:0088379"}


id: PBO:0112922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation wall assembly GPI anchored protein, Meu10","termid":"PBO:0112922"}


id: PBO:0109815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly factor Nas2","termid":"PBO:0109815"}


id: PBO:0052135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 2","termid":"PBO:0052135"}


id: PBO:0045046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DKKL1 pseudogene 1","termid":"PBO:0045046"}


id: MONDO:0002537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endophytic benign papillary epithelial neoplasm that results from the invagination and proliferation of epithelial cells in the underlying stroma. Representative examples are the inverted urothelial papilloma that arises from the urinary tract and inverted Schneiderian papilloma that arises from the nasal cavity or paranasal sinuses.","definition_xrefs":["NCIT:C3793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted papilloma","secondary_identifiers":["MEDGEN:61668","DOID:3179","SCTID:104081000119103","ICD9:212.0","UMLS:C0206721","MESH:D018308"],"synonyms":[{"name":"inverted papilloma","type":"exact"},{"name":"inverted papilloma, squamous cell","type":"exact"}],"termid":"MONDO:0002537","xrefs":{"Monarch":{"xref_id":"0002537"}}}


id: GO:0021994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural folds are fused extending from the initial closure points.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"progression of neural tube closure","termid":"GO:0021994"}


id: FYPO:0006565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable under conditions of phosphate starvation.","definition_xrefs":["PomBase:mah","PMID:9372444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal viability upon phosphate starvation","synonyms":[{"name":"normal cell population viability upon phosphate starvation","type":"exact"}],"termid":"FYPO:0006565"}


id: PBO:0072634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1","termid":"PBO:0072634"}


id: GO:0097056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of selenocysteinyl-tRNA(Sec). This process occurs through the following steps: a unique serine-tRNA with a UGA recognizing anticodon is first aminoacylated with serine; this is then phosphorylated by phosphoseryl-tRNA[Ser]Sec kinase; lastly, selenium is swapped for the phosphate on the serine.","definition_xrefs":["PMID:15317934","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete selenocysteinyl-tRNA(Sec) biosynthetic process (obsolete GO:0097056)","synonyms":[{"name":"selenocysteinyl-tRNA(Sec) anabolism","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) biosynthesis","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) formation","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) synthesis","type":"exact"}],"termid":"GO:0097056"}


id: GO:1904932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cartilage condensation.","definition_xrefs":["GOC:mr","PMID:17604018","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cartilage condensation","termid":"GO:1902026"},{"relation_name":"negatively_regulates","term_name":"cartilage condensation","termid":"GO:0001502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cartilage condensation","synonyms":[{"name":"down regulation of cartilage condensation","type":"exact"},{"name":"down-regulation of cartilage condensation","type":"exact"},{"name":"downregulation of cartilage condensation","type":"exact"},{"name":"inhibition of cartilage condensation","type":"narrow"}],"termid":"GO:1904932"}


id: GO:0060330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to type II interferon","synonyms":[{"name":"regulation of response to type II IFN","type":"exact"},{"name":"regulation of response to gamma-interferon","type":"related"},{"name":"regulation of response to immune interferon","type":"exact"},{"name":"regulation of response to interferon-gamma","type":"broad"}],"termid":"GO:0060330"}


id: PBO:0080306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 70 pseudogene","termid":"PBO:0080306"}


id: MONDO:1010097
data:
  {"annotated_genes":["SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044326"},{"annotations":[85982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013468"}]},"cv_name":"mondo","definition":"Any neurological disorder in which the cause of the disease is a mutation in the DHDDS gene.","definition_xrefs":["PMID:34034154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02163":null},"genotype_count":0,"is_obsolete":false,"name":"DHDDS-related syndrome","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"progressive myoclonus ataxia","type":"broad"}],"termid":"MONDO:1010097","terms_by_termid":{"MONDO:0013468":null,"MONDO:0044326":null},"xrefs":{"Monarch":{"xref_id":"1010097"}}}


id: FYPO:0001543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphorus-containing substance measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular phosphorus level","synonyms":[{"name":"normal cellular level of phosphorus-containing substance","type":"exact"},{"name":"normal cellular phosphorus accumulation","type":"related"},{"name":"normal cellular phosphorus level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphorus level during vegetative growth","type":"exact"}],"termid":"FYPO:0001543"}


