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id: PBO:0029988
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id: MONDO:0010410
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id: PBO:0028696
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id: PBO:0091561
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id: GO:1905505
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id: PBO:0075796
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id: PBO:0056900
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id: MONDO:0012542
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id: PBO:0085672
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id: PBO:0049817
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id: PBO:0051733
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id: PBO:0074560
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id: PBO:0075862
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data:
  {"annotated_genes":["SJAG_02043"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011266"}]},"cv_name":"mondo","definition":"An inherited progressive disorder affecting the muscles. It is characterized by muscle wasting and hypotonia, cataracts, heart conduction defects and endocrinopathies.","definition_xrefs":["NCIT:C84914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myotonic dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D009223","MedDRA:10068871","NANDO:1200495","ICD9:359.2","MEDGEN:10239","NANDO:2200864","DOID:450","OMIMPS:160900","Orphanet:206647","SCTID:240104008","UMLS:C0027126","icd11.foundation:192087511","GARD:10419"],"synonyms":[{"name":"inherited myotonic dystrophy","type":"exact"},{"name":"myotonia atrophica","type":"related"},{"name":"myotonia dystrophica","type":"related"},{"name":"myotonic disease","type":"related"}],"termid":"MONDO:0016107","terms_by_termid":{"MONDO:0011266":null},"xrefs":{"Monarch":{"xref_id":"0016107"}}}


id: MONDO:0012513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the KLF11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0037792","MONDO:0005066","MONDO:0004335","MONDO:0005015"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 7","secondary_identifiers":["MEDGEN:351232","MESH:C566466","SCTID:609574004","GARD:10661","DOID:0111106","OMIM:610508","UMLS:C1864839"],"synonyms":[{"name":"KLF11 maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"MODY KLF11 related","type":"related"},{"name":"MODY type 7","type":"related"},{"name":"MODY7","type":"exact"},{"name":"diabetes mellitus MODY type 7","type":"related"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in KLF11","type":"exact"},{"name":"maturity-onset diabetes of the young, type 7","type":"related"},{"name":"maturity-onset diabetes of the young, type VII","type":"exact"},{"name":"type 7 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0012513","xrefs":{"Monarch":{"xref_id":"0012513"}}}


id: PBO:0064690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 26","termid":"PBO:0064690"}


id: FYPO:0007992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during metaphase.","definition_xrefs":["PMID:35286199","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during metaphase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during metaphase","type":"exact"}],"termid":"FYPO:0007992"}


id: MONDO:0100227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any motor neuron disease in which the cause of the disease is a mutation in the ALS2 gene.","definition_xrefs":["PMID:35053075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"ALS2-related motor neuron disease","synonyms":[{"name":"Alsin-related motor neuron disease","type":"exact"}],"termid":"MONDO:0100227","xrefs":{"Monarch":{"xref_id":"0100227"}}}


id: GO:0034020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-violaxanthin = all-trans-neoxanthin.","definition_xrefs":["RHEA:10128","EC:5.3.99.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"neoxanthin synthase activity","secondary_identifiers":["MetaCyc:RXN1F-155","KEGG_REACTION:R06948"],"synonyms":[{"name":"NSY","type":"related"},{"name":"violaxanthin-neoxanthin isomerase (epoxide-opening) activity","type":"related"}],"termid":"GO:0034020"}


id: FYECO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing xylose as the carbon source, yeast extract and other components. The concentration of xylose is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose YE","synonyms":[{"name":"xylose rich medium","type":"broad"}],"termid":"FYECO:0000414"}


id: PBO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain protein, unknown biological role","termid":"PBO:0000822"}


id: MONDO:0023165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"endosalpingiosis","termid":"MONDO:0001283"},{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"florid cystic endosalpingiosis of the uterus","secondary_identifiers":["MESH:C537064","UMLS:C2931410","MEDGEN:419405"],"synonyms":[{"name":"cystic endosalpingiosis of the uterus","type":"related"},{"name":"florid cystic endosalpingiosis","type":"related"},{"name":"intramural florid cystic endosalpingiosis in lower uterine segment of the uterus","type":"related"},{"name":"intramural florid cystic endosalpingiosis of the uterus","type":"related"}],"termid":"MONDO:0023165","xrefs":{"Monarch":{"xref_id":"0023165"}}}


id: PBO:0082357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aurora kinase of chromosomal passenger complex; mediates release of mono-oriented kinetochores from microtubules in meiosis I, and kinetochore release from SPB clusters at meiotic exit; helps maintain condensed chromosomes during anaphase; required for SPB cohesion and prevention of multipolar spindle formation; promotes telomerase release at G2/M; Iocalizes to nuclear foci that diffuse upon DNA replication stress; required for inhibition of karyopherin Pse1p upon SAC arrest","termid":"PBO:0082357"}


id: GO:0034168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 10 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 10 signaling pathway","termid":"GO:0034167"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 10 signaling pathway","termid":"GO:0034166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 10 signaling pathway","synonyms":[{"name":"negative regulation of TLR10 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 10 signalling pathway","type":"exact"}],"termid":"GO:0034168"}


id: PBO:0045230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC17 pseudogene 1","termid":"PBO:0045230"}


id: PBO:0068430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 5","termid":"PBO:0068430"}


id: PBO:0046060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit J","termid":"PBO:0046060"}


id: PBO:0090884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex tRNA uridine(34) acetyltransferase subunit Elp3","termid":"PBO:0090884"}


id: PBO:0091899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane high-affinity glucose:proton symporter Ght1","termid":"PBO:0091899"}


id: PBO:0034667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_transport_during_vegetative_growth","termid":"PBO:0034667"}


id: PBO:0040420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit d1","termid":"PBO:0040420"}


id: SO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature are increased relative to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_change","termid":"SO:0001563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_increase","synonyms":[{"name":"copy number increase","type":"exact"}],"termid":"SO:0001911"}


id: PBO:0053585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 608","termid":"PBO:0053585"}


id: GO:0005461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucuronic acid from one side of a membrane to the other. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"UDP-glucuronic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-174368","Reactome:R-HSA-5603297","Reactome:R-HSA-9912889"],"termid":"GO:0005461"}


id: GO:0019717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptosome (obsolete GO:0019717)","secondary_identifiers":["Wikipedia:Synaptosome"],"synonyms":[{"name":"synaptosome","type":"exact"}],"termid":"GO:0019717"}


id: MONDO:0014267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency due to IKK2 deficiency is a rare, genetic form of primary immunodeficiency characterized by life-threatening bacterial, fungal and viral infections with the onset in infancy, and failure to thrive. Typically, hypogammaglobulinemia or agammaglobulinemia and normal levels of T and B cells are present.","definition_xrefs":["Orphanet:397787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T+ B+ severe combined immunodeficiency","termid":"MONDO:0044201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency due to IKK2 deficiency","secondary_identifiers":["DOID:0111959","GARD:17641","MEDGEN:1648569","UMLS:C4747743","OMIM:615592"],"synonyms":[{"name":"IMD15","type":"related"},{"name":"SCID due to IKK2 deficiency","type":"exact"},{"name":"immunodeficiency 15","type":"related"},{"name":"immunodeficiency 15B","type":"exact"},{"name":"immunodeficiency type 15","type":"exact"}],"termid":"MONDO:0014267","xrefs":{"Monarch":{"xref_id":"0014267"}}}


id: MONDO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pachyonychia congenita (obsolete MONDO:0000325)","termid":"MONDO:0000325","xrefs":{"Monarch":{"xref_id":"0000325"}}}


id: GO:0009620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fungus","secondary_identifiers":["GO:0009621"],"synonyms":[{"name":"response to fungi","type":"exact"}],"termid":"GO:0009620"}


id: GO:0021595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the rhombomere structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"rhombomere morphogenesis","termid":"GO:0021593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere structural organization","synonyms":[{"name":"rhombomere structural organisation","type":"exact"}],"termid":"GO:0021595"}


id: GO:0047776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-citramalate = acetate + pyruvate.","definition_xrefs":["RHEA:15545","EC:4.1.3.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"citramalate lyase activity","secondary_identifiers":["KEGG_REACTION:R00325","MetaCyc:CITRAMALATE-LYASE-RXN"],"synonyms":[{"name":"(+)-citramalate pyruvate-lyase activity","type":"related"},{"name":"(3S)-citramalate pyruvate-lyase (acetate-forming)","type":"related"},{"name":"(3S)-citramalate pyruvate-lyase activity","type":"related"},{"name":"(S)-citramalate lyase activity","type":"related"},{"name":"citramalate pyruvate lyase activity","type":"related"},{"name":"citramalate pyruvate-lyase activity","type":"related"},{"name":"citramalate synthetase activity","type":"related"},{"name":"citramalic synthase activity","type":"related"},{"name":"citramalic-condensing enzyme","type":"related"}],"termid":"GO:0047776"}


id: PBO:0052905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-2","termid":"PBO:0052905"}


id: PBO:0042986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint kinase 1","termid":"PBO:0042986"}


id: MONDO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melancholy feeling of sadness and despair.","definition_xrefs":["NCIT:C2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depressive disorder","secondary_identifiers":["DOID:1596","MFOMD:0000013","MEDGEN:4229","UMLS:C0011581","ICD9:311","MESH:D003866","SCTID:35489007","ICD10CM:F32"],"synonyms":[{"name":"depression","type":"exact"},{"name":"melancholia","type":"related"},{"name":"melancholias","type":"related"},{"name":"mental depression","type":"exact"},{"name":"syndrome, depressive","type":"related"},{"name":"syndromes, depressive","type":"related"}],"termid":"MONDO:0002050","xrefs":{"Monarch":{"xref_id":"0002050"}}}


id: PBO:0054642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2047","termid":"PBO:0054642"}


id: PBO:0079185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 14, pseudogene","termid":"PBO:0079185"}


id: PBO:0047681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLNC antisense RNA 1","termid":"PBO:0047681"}


id: PBO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric duplication","termid":"PBO:0000066"}


id: PBO:0053892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1176","termid":"PBO:0053892"}


id: MONDO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multiple sclerosis that is characterized by steadily worsening symptoms and attacks during periods of remission with disease progression from the onset.","definition_xrefs":["DOID:0050785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic progressive multiple sclerosis","termid":"MONDO:0005284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"progressive relapsing multiple sclerosis","secondary_identifiers":["UMLS:C0393666","MEDGEN:95982","SCTID:230374002"],"synonyms":[{"name":"PRMS","type":"exact"},{"name":"progressive-relapsing MS","type":"exact"}],"termid":"MONDO:0000452","xrefs":{"Monarch":{"xref_id":"0000452"}}}


id: SO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001057 enhanceosome (obsolete SO:0001057)","termid":"SO:0001057"}


id: PBO:0073483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin synthase 1","termid":"PBO:0073483"}


id: PBO:0038926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L1","termid":"PBO:0038926"}


id: PBO:0075491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 1","termid":"PBO:0075491"}


id: SO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an UST sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UST_match","synonyms":[{"name":"UST match","type":"exact"}],"termid":"SO:0001470"}


id: PBO:0116190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolizing), Oxp2","termid":"PBO:0116190"}


id: MONDO:0003895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate grade malignant bone-forming mesenchymal neoplasm with chondroblastic differentiation. It arises from the surface of the bone and affects the diaphysis or diaphyseal- metaphyseal portion of the long bones. A painless mass or swelling is the most common clinical sign. It is associated with a better prognosis than conventional osteosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral osteosarcoma","termid":"MONDO:0002628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"periosteal osteogenic sarcoma","secondary_identifiers":["UMLS:C1377843","DOID:6489","NCIT:C8970","ICDO:9193/3","MEDGEN:234607","ONCOTREE:PEOS"],"synonyms":[{"name":"PEOS","type":"related"},{"name":"juxtacortical chondroblastic osteosarcoma","type":"exact"},{"name":"periosteal osteogenic sarcoma","type":"exact"},{"name":"periosteal osteosarcoma","type":"exact"},{"name":"periosteal osteosarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003895","xrefs":{"Monarch":{"xref_id":"0003895"}}}


id: PBO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Pas1/PHO80 domain containing 1","termid":"PBO:0043477"}


id: GO:0090032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"}


id: PBO:0012019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 variant, CENP-T ortholog","termid":"PBO:0012019"}


id: GO:0004898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete gp130 (obsolete GO:0004898)","synonyms":[{"name":"gp130","type":"exact"}],"termid":"GO:0004898"}


id: MONDO:0014920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any patterned macular dystrophy in which the cause of the disease is a mutation in the MAPKAPK3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned macular dystrophy","termid":"MONDO:0020381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"patterned macular dystrophy 3","secondary_identifiers":["Orphanet:466718","UMLS:C4310713","DOID:0060865","GARD:17826","MEDGEN:934680","ICD10CM:H35.5","OMIM:617111"],"synonyms":[{"name":"MAPKAPK3 patterned macular dystrophy","type":"exact"},{"name":"MCRPE","type":"exact"},{"name":"MDPT3","type":"exact"},{"name":"Martinique crinkled retinal pigment epitheliopathy","type":"exact"},{"name":"macular dystrophy, patterned, 3","type":"exact"},{"name":"macular dystrophy, patterned, type 3","type":"exact"},{"name":"patterned macular dystrophy caused by mutation in MAPKAPK3","type":"exact"},{"name":"patterned macular dystrophy type 3","type":"exact"}],"termid":"MONDO:0014920","xrefs":{"Monarch":{"xref_id":"0014920"}}}


id: PBO:0084574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein of unknown function; overexpression suppresses NaCl sensitivity of sro7 mutant cells by restoring sodium pump (Ena1p) localization to the plasma membrane","termid":"PBO:0084574"}


id: MONDO:0013864
data:
  {"annotated_genes":["SJAG_01067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85371],"is_not":false,"summary":null,"term":"MONDO:0013864"}]},"cv_name":"mondo","definition":"Any Cornelia de Lange syndrome in which the cause of the disease is a mutation in the RAD21 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01067":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15837","OMIM:614701","UMLS:C3553517","DOID:0080508","MEDGEN:766431"],"synonyms":[{"name":"CDLS4","type":"related"},{"name":"Cornelia DE Lange syndrome 4","type":"related"},{"name":"Cornelia De Lange syndrome type 4","type":"exact"},{"name":"Cornelia de Lange syndrome 4","type":"exact"},{"name":"Cornelia de Lange syndrome caused by mutation in RAD21","type":"exact"},{"name":"RAD21 Cornelia de Lange syndrome","type":"exact"}],"termid":"MONDO:0013864","terms_by_termid":{"MONDO:0013864":null},"xrefs":{"Monarch":{"xref_id":"0013864"}}}


id: GO:0090482
data:
  {"annotated_genes":["SJAG_05175","SJAG_03503","SJAG_00835","SJAG_02962","SJAG_02780","SJAG_03652","SJAG_02779","SJAG_04673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91262,71172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[106722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[99864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[107441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[102816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[89359,89360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a vitamin from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"vitamin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051183"],"synonyms":[{"name":"vitamin or cofactor transporter activity","type":"broad"},{"name":"vitamin transporter activity","type":"related"}],"termid":"GO:0090482","terms_by_termid":{"GO:0008517":null,"GO:0015225":null,"GO:0015233":null,"GO:0015234":null,"GO:0034216":null,"GO:0090422":null}}


id: MOD:01397
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and an L-threonine residue to form L-serine 5-methyloxazole-4-carboxylic acid.","definition_xrefs":["PubMed:8557573","PubMed:7592021","RESID:AA0474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine 5-methyloxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxyethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methyloxazole-4-carboxylic acid (Ser-Thr)","type":"exact"},{"name":"L-serine 5-methyloxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01397"}


id: PBO:0080883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL5 pseudogene 3","termid":"PBO:0080883"}


id: GO:0051586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of dopamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine uptake involved in synaptic transmission","termid":"GO:0051584"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051944"},{"relation_name":"positively_regulates","term_name":"dopamine uptake involved in synaptic transmission","termid":"GO:0051583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of dopamine uptake involved in synaptic transmission","synonyms":[{"name":"activation of dopamine uptake involved in synaptic transmission","type":"narrow"},{"name":"positive regulation of dopamine import involved in synaptic transmission","type":"exact"},{"name":"stimulation of dopamine uptake involved in synaptic transmission","type":"narrow"},{"name":"up regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"up-regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"upregulation of dopamine uptake involved in synaptic transmission","type":"exact"}],"termid":"GO:0051586"}


id: FYPO:0004019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from succinate to ubiquinone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular respiration","termid":"FYPO:0000566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrial electron transport, succinate to ubiquinone","synonyms":[{"name":"normal mitochondrial electron transport, succinate to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial electron transport, succinate to ubiquinone, during vegetative growth","type":"exact"},{"name":"normal succinate cytochrome c oxidoreductase","type":"related"},{"name":"normal succinate dehydrogenase (ubiquinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"}],"termid":"FYPO:0004019"}


id: SO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is allelically_excluded.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"allelically_excluded","termid":"SO:0000137"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelically_excluded_gene","synonyms":[{"name":"allelically excluded gene","type":"exact"}],"termid":"SO:0000897"}


id: GO:0030913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the junction between an axon and the glial cell that forms the myelin sheath. Paranodal junctions form at each paranode, i.e. at the ends of the unmyelinated nodes of Ranvier.","definition_xrefs":["PMID:14715942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"myelin assembly","termid":"GO:0032288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"paranodal junction assembly","synonyms":[{"name":"paranodal axoglial junction formation","type":"exact"},{"name":"paranodal junction biosynthesis","type":"exact"},{"name":"paranodal junction formation","type":"exact"}],"termid":"GO:0030913"}


id: GO:1905713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mitochondrial calcium uptake that is involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["GO_REF:0000060","PMID:26644474","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial calcium uptake involved in regulation of presynaptic cytosolic calcium ion concentration (obsolete GO:1905713)","synonyms":[{"name":"calcium ion transmembrane import into mitochondrion involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ion transmembrane import into mitochondrion involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"mitochondrial calcium uptake involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:1905713"}


id: GO:1904943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:bc","GOC:BHF_miRNA","PMID:23575307","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac chamber formation","termid":"GO:1901211"},{"relation_name":"is_a","term_name":"negative regulation of cardiac ventricle development","termid":"GO:1904413"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle formation","termid":"GO:1904942"},{"relation_name":"negatively_regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac ventricle formation","synonyms":[{"name":"down regulation of cardiac ventricle formation","type":"exact"},{"name":"down-regulation of cardiac ventricle formation","type":"exact"},{"name":"downregulation of cardiac ventricle formation","type":"exact"},{"name":"inhibition of cardiac ventricle formation","type":"narrow"}],"termid":"GO:1904943"}


id: PBO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricothiodystrophy disorder","termid":"PBO:0004218"}


id: PBO:0089611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit C, Pcf3","termid":"PBO:0089611"}


id: PBO:0071060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 62","termid":"PBO:0071060"}


id: PATO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The number of parts of a particular type that the bearer entity has. This is a relational quality, and thus holds between two entities: the bearer of the quality, and the type of parts.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has number of","secondary_identifiers":["OBO_REL:has_part"],"synonyms":[{"name":"cardinality","type":"related"},{"name":"extra or missing physical or functional parts","type":"exact"},{"name":"has or lacks parts of type","type":"exact"},{"name":"mereological quality","type":"exact"},{"name":"number","type":"related"},{"name":"number of","type":"exact"}],"termid":"PATO:0001555"}


id: PATO:0001218
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001218 substance_unit (obsolete PATO:0001218)","termid":"PATO:0001218"}


id: PBO:0013819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family protein Art1","termid":"PBO:0013819"}


id: PBO:0018073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase Cyc3 (predicted)","termid":"PBO:0018073"}


id: GO:0050195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP = D-ribose 1,5-diphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:21216","EC:2.7.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"phosphoribokinase activity","secondary_identifiers":["KEGG_REACTION:R01050","MetaCyc:PHOSPHORIBOKINASE-RXN"],"synonyms":[{"name":"ATP:D-ribose-5-phosphate 1-phosphotransferase activity","type":"related"},{"name":"phosphoribokinase (phosphorylating)","type":"related"}],"termid":"GO:0050195"}


id: GO:0048627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myoblast over time, from its formation to the mature structure. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast development","termid":"GO:0048627"}


id: RO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x proper_distributary_of y iff x distributary_of y and x does not flow back into y","direct_ancestors":[{"relation_name":"is_a","term_name":"distributary_of","termid":"RO:0002377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proper_distributary_of","termid":"RO:0002382"}


id: MOD:00173
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to N-threonyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["RESID:AA0164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:01155","MOD:00764"],"is_obsolete":false,"name":"N-threonyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIThr","type":"exact"},{"name":"LIPID GPI-anchor amidated threonine","type":"exact"},{"name":"N-threonyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00173"}


id: MONDO:0013069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An optic atrophy that is caused by a mutation in the TMEM126A gene.","definition_xrefs":["OMIM:612989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive optic atrophy, OPA7 type","secondary_identifiers":["MEDGEN:414112","Orphanet:227976","DOID:0111437","MESH:C567833","UMLS:C2751812","GARD:17143"],"synonyms":[{"name":"OPA7","type":"related"},{"name":"TMEM126A-related optic atrophy with or without extraocular features","type":"exact"},{"name":"optic atrophy 7","type":"exact"},{"name":"optic atrophy 7 with or without auditory neuropathy","type":"related"}],"termid":"MONDO:0013069","xrefs":{"Monarch":{"xref_id":"0013069"}}}


id: PBO:0084217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of mammalian ELMO (Engulfment and celL MOtility); upstream component for regulation through the small GTPase Rho5p; may form a complex with Dck1p that acts as a GEF for Rho5p; cytoplasmic protein that relocates to mitochondria under oxidative stress; implicated in mitophagy; not an essential protein","termid":"PBO:0084217"}


id: GO:0043321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"regulates","term_name":"natural killer cell degranulation","termid":"GO:0043320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of natural killer cell degranulation","synonyms":[{"name":"regulation of NK cell degranulation","type":"exact"},{"name":"regulation of NK cell granule exocytosis","type":"exact"},{"name":"regulation of natural killer cell granule exocytosis","type":"exact"}],"termid":"GO:0043321"}


id: PBO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase (predicted)","termid":"PBO:0002377"}


id: PBO:0075411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 7","termid":"PBO:0075411"}


id: PBO:0076638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein like 1","termid":"PBO:0076638"}


id: PBO:0027133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_telomere-nuclear_envelope_distance_during_mitotic_G2_phase","termid":"PBO:0027133"}


id: PR:O74509
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vsl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar morphogenesis protein 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.06c","synonyms":[{"name":"Spom972h-vsl1","type":"exact"}],"termid":"PR:O74509"}


id: GO:0150088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A single axon terminal bouton making contact onto two or more dendritic spines protruding from multiple dendrites.","definition_xrefs":["PMID:7482800","GOC:bc","PMID:8366344","PMID:24487234","GOC:aruk","PMID:22028887","PMID:10586883","PMID:11248111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synapse bouton","termid":"GO:0150086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"multiple synapse bouton, contacting multiple dendrites","synonyms":[{"name":"MSB2","type":"exact"},{"name":"type 2 multi-synapse bouton","type":"exact"},{"name":"type 2 multi-synaptic bouton","type":"exact"},{"name":"type 2 multiple spine synapse bouton","type":"exact"},{"name":"type 2 multiple-synapse bouton","type":"exact"},{"name":"type 2 multisynapse bouton","type":"exact"},{"name":"type 2 multisynaptic bouton","type":"exact"}],"termid":"GO:0150088"}


id: GO:0003120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of epinephrine into the bloodstream.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by epinephrine","termid":"GO:0003115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by circulating epinephrine","synonyms":[{"name":"regulation of vasoconstriction by circulating adrenaline","type":"exact"}],"termid":"GO:0003120"}


id: PBO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body WD repeat protein, human WDR8 family","termid":"PBO:0016555"}


id: MONDO:0018482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete squamous cell carcinoma of stomach (obsolete MONDO:0018482)","termid":"MONDO:0018482","xrefs":{"Monarch":{"xref_id":"0018482"}}}


id: PBO:0088619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk31","termid":"PBO:0088619"}


id: GO:0071919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA metabolic process that results in the formation of G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad or G-quartet. The stacking of several layers of G-quartets forms G-quadruplexes, in which one or more DNA single strands are assembled in parallel and/or antiparallel, with interactions that can be either intra- or intermolecular in nature.","definition_xrefs":["GOC:sre","PMID:20098422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"G-quadruplex DNA formation","synonyms":[{"name":"G quadruplex DNA formation","type":"exact"},{"name":"G quartet DNA formation","type":"exact"},{"name":"G-quartet DNA formation","type":"exact"}],"termid":"GO:0071919"}


id: PBO:0075894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression of tumorigenicity 7","termid":"PBO:0075894"}


id: GO:0050085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NADP+ = D-fructose + H+ + NADPH.","definition_xrefs":["RHEA:16765","EC:1.1.1.138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"mannitol 2-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R00870","MetaCyc:MANNITOL-2-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"D-mannitol:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"NADP-dependent mannitol dehydrogenase activity","type":"related"}],"termid":"GO:0050085"}


id: GO:0051164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylitol, a five-carbon sugar alcohol derived from xylose by reduction of the carbonyl group. It is as sweet as sucrose and is used as a noncariogenic sweetner and as a sugar substitute in diabetic diets.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"xylitol metabolic process","synonyms":[{"name":"xylitol metabolism","type":"exact"}],"termid":"GO:0051164"}


id: PBO:0055481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2914","termid":"PBO:0055481"}


id: MONDO:1010441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiomyopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, dog","secondary_identifiers":["OMIA:000160-9615"],"termid":"MONDO:1010441","xrefs":{"Monarch":{"xref_id":"1010441"}}}


id: PR:Q9USN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04485","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.06c","secondary_identifiers":["UniProtKB:Q9USN0"],"synonyms":[{"name":"GPI mannosyltransferase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGB","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USN0"}


id: PBO:0046356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 14","termid":"PBO:0046356"}


id: FYPO:0003204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable secondary cell septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"secondary cell septum absent from cell during vegetative growth","synonyms":[{"name":"absent secondary cell septum during vegetative growth","type":"exact"},{"name":"secondary cell septum absent from cell during mitotic cell cycle","type":"related"},{"name":"secondary septum absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003204"}


id: FYPO:0004266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cortical microtubule cytoskeleton does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton","termid":"FYPO:0004265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cortical microtubule cytoskeleton","synonyms":[{"name":"abolished protein localisation to cortical microtubule cytoskeleton","type":"exact"},{"name":"protein absent from cortical microtubule cytoskeleton","type":"related"},{"name":"protein localization to cortical microtubule cytoskeleton abolished","type":"exact"}],"termid":"FYPO:0004266"}


id: PBO:0077049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor beta","termid":"PBO:0077049"}


id: MONDO:0021222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"},{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"lacrimal gland neoplasm","secondary_identifiers":["UMLS:C0339124","MEDGEN:83280","NCIT:C4360"],"synonyms":[{"name":"lacrimal gland neoplasm (disease)","type":"exact"},{"name":"lacrimal gland tumor","type":"exact"},{"name":"lacrimal gland tumour","type":"exact"},{"name":"neoplasm of lacrimal gland","type":"exact"},{"name":"neoplasm of the lacrimal gland","type":"exact"},{"name":"tumor of lacrimal gland","type":"exact"},{"name":"tumor of the lacrimal gland","type":"exact"},{"name":"tumour of lacrimal gland","type":"exact"},{"name":"tumour of the lacrimal gland","type":"exact"}],"termid":"MONDO:0021222","xrefs":{"Monarch":{"xref_id":"0021222"}}}


id: PBO:0050999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport associated protein","termid":"PBO:0050999"}


id: PBO:0086706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mCherry fusion protein localizes to the cytosol and nucleus","termid":"PBO:0086706"}


id: GO:0140208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that occurs as a result of mitochondrial fragmentation.","definition_xrefs":["PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process in response to mitochondrial fragmentation","synonyms":[{"name":"apoptosis in response to mitochondrial fragmentation","type":"exact"}],"termid":"GO:0140208"}


id: GO:1990468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A NuA3 complex that catalyzes the acetylation of Histone H3. In S. cerevisiae, this complex consists of Eaf6p, Nto1p, Sas3p, Taf14p, Pdp3 and associates with H3K4me3 via Pdp3p.","definition_xrefs":["GOC:rb","PMID:25104842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NuA3 histone acetyltransferase complex","termid":"GO:0033100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"NuA3b histone acetyltransferase complex","termid":"GO:1990468"}


id: MONDO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma confined to the mucosa or mucosa and submucosa of the gastric wall. The regional lymph nodes may or may not be involved. It usually occurs in the lesser curvature. The 5-year survival rate following resection is between 80 percent and 95 percent, and remains high even when lymph node metastases are present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"microinvasive gastric cancer","secondary_identifiers":["DOID:10541","SCTID:276809004","UMLS:C0349530","NCIT:C27131","MEDGEN:138098"],"synonyms":[{"name":"EGC","type":"exact"},{"name":"early gastric cancer","type":"exact"},{"name":"superficial gastric cancer","type":"exact"},{"name":"superficial spreading gastric cancer","type":"exact"},{"name":"surface gastric cancer","type":"exact"}],"termid":"MONDO:0001060","xrefs":{"Monarch":{"xref_id":"0001060"}}}


id: GO:0060589
data:
  {"annotated_genes":["SJAG_02422","SJAG_00991","SJAG_03748","SJAG_00338","SJAG_00289","SJAG_01048","SJAG_02231","SJAG_00551","SJAG_00801","SJAG_04982","SJAG_04522","SJAG_03085","SJAG_00807","SJAG_00216","SJAG_03655","SJAG_00064","SJAG_03002","SJAG_04391","SJAG_01011","SJAG_02390","SJAG_01184","SJAG_04733","SJAG_04498","SJAG_03021","SJAG_00990","SJAG_04283","SJAG_04765","SJAG_02379","SJAG_01659","SJAG_04462","SJAG_03142","SJAG_01367","SJAG_02027","SJAG_04724","SJAG_02063","SJAG_02529","SJAG_01114","SJAG_01025","SJAG_02520","SJAG_02645","SJAG_04010","SJAG_02278","SJAG_05346","SJAG_01415","SJAG_02368","SJAG_01695","SJAG_00864","SJAG_02833","SJAG_03089","SJAG_01319","SJAG_00143","SJAG_04771","SJAG_01576","SJAG_03704","SJAG_04943","SJAG_04938","SJAG_02004","SJAG_02012","SJAG_01309","SJAG_00824","SJAG_05184","SJAG_03268","SJAG_00467","SJAG_01030","SJAG_04910","SJAG_03361","SJAG_02277","SJAG_03246","SJAG_04464","SJAG_04548","SJAG_04203","SJAG_02666","SJAG_04491","SJAG_02819","SJAG_04837","SJAG_04615","SJAG_03678","SJAG_02493","SJAG_00514","SJAG_05210","SJAG_03153","SJAG_04776","SJAG_03338","SJAG_04074","SJAG_02486","SJAG_04653","SJAG_02160","SJAG_06588","SJAG_01600","SJAG_01386","SJAG_04080","SJAG_01526","SJAG_01699","SJAG_03705","SJAG_02765","SJAG_03836","SJAG_02248","SJAG_04400","SJAG_02539","SJAG_04013","SJAG_00028","SJAG_03488","SJAG_00858","SJAG_02307","SJAG_03600","SJAG_03581","SJAG_02831","SJAG_02471","SJAG_00092"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95066,102700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005092"},{"annotations":[106311,93375,90467,101633,110601,116872,92429,110101,110510,79109,95297,94136,94143,104574,92042,104452,97252,99526,108573,65002,113381,98863,98076,92368,95752,106774,114131,97228,104333,104508,106206,106559,92367,111122,109257,86754,98040,94225,70098,88438,92530,94611,106013,93374,95067,109991,115731,93170,116269,87680,104224,92522,105638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005096"},{"annotations":[115443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[105836,90301,95473,116622,115169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030695"},{"annotations":[104296,109817,97006,95518,93783,90684,98306,99690,90211,97164,107464,96957,109168,110158,113109,114937,117037,86734,105575,108253,115638,96510,117022,87272,91971,97649,113759,95860,113937,90401,99029,109267,109931,94191,74010,93522,113860,89081,113064,91319,113110,114667,95250,93060,96918,106155,99689,107114,93246,99030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005085"},{"annotations":[92698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005093"},{"annotations":[98730,109944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005094"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of an NTPase.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator 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regulator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"NTPase regulator activity","type":"exact"}],"termid":"GO:0060589","terms_by_termid":{"GO:0005085":null,"GO:0005092":null,"GO:0005093":null,"GO:0005094":null,"GO:0005095":null,"GO:0005096":null,"GO:0030695":null}}


id: GO:0002941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of type B synoviocytes by cell division, resulting in the expansion of their population. A type B synoviocyte is a fibroblast-like cell found in synovial tissues.","definition_xrefs":["PMID:10770586","PMID:9546370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synoviocyte proliferation","termid":"GO:0002941"}


id: PBO:0078378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 2","termid":"PBO:0078378"}


id: GO:0072084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the kidney nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"distal tubule morphogenesis","termid":"GO:0072156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of distal tubule identity","termid":"GO:0072084"}


id: PBO:0087196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA m5C methyltransferase; methylates cytosine at position 2278 of 25S rRNA while Nop2p methylates cytosine at position 2870; contains seven beta-strand methyltransferase motif; localized to the nucleolus; interacts with Trm112p; homolog of NSUN5A, a human gene which is deleted in Williams-Beuren Syndrome","termid":"PBO:0087196"}


id: PBO:0078725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 1-1","termid":"PBO:0078725"}


id: PBO:0061331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B9","termid":"PBO:0061331"}


id: GO:0140793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2AX tyrosine phosphate (position 142) + H2O = histone H2AX tyrosine (position 142) + phosphate.","definition_xrefs":["PMID:19234442","PMID:19351884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone phosphatase activity","termid":"GO:0140789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788","GO:0140096","GO:0004721"],"is_obsolete":false,"name":"histone H2AXY142 phosphatase activity","synonyms":[{"name":"histone H2-Y142 phosphatase activity","type":"exact"},{"name":"histone H2Y142 phosphatase activity","type":"related"},{"name":"histone tyrosine phosphatase activity (H2-Y142 specific)","type":"exact"}],"termid":"GO:0140793"}


id: PBO:0089121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase, unknown specificity, implicated in glutathione metabolism","termid":"PBO:0089121"}


id: MONDO:0022802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Collins-Sakati syndrome","synonyms":[{"name":"Collins Sakati syndrome","type":"related"}],"termid":"MONDO:0022802","xrefs":{"Monarch":{"xref_id":"0022802"}}}


id: GO:0015140
data:
  {"annotated_genes":["SJAG_01406","SJAG_02140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100842,117579],"is_not":false,"summary":null,"term":"GO:0015140"},{"annotations":[100843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of malate from one side of a membrane to the other. Malate is a chiral hydroxydicarboxylic acid, hydroxybutanedioic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"malate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"}],"termid":"GO:0015140","terms_by_termid":{"GO:0015140":null,"GO:0015366":null}}


id: PBO:0086362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ADP-ribose-1''-monophosphatase; converts ADP-ribose-1''-monophosphate to ADP-ribose; may have a role in tRNA splicing; contains an A1pp domain","termid":"PBO:0086362"}


id: PBO:0069794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1080, pseudogene","termid":"PBO:0069794"}


id: PBO:0060620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK adaptor protein 1","termid":"PBO:0060620"}


id: GO:0010682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of flavonoids.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in flavonoid metabolism (obsolete GO:0010682)","termid":"GO:0010682"}


id: PR:000036301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"},{"relation_name":"is_a","term_name":"fungal-type cyclin-dependent kinase 1","termid":"PR:000037486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:000036301"}


id: PBO:0054282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1673","termid":"PBO:0054282"}


id: GO:0047946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + L-glutamine = CoA + N-acyl-L-glutamine.","definition_xrefs":["EC:2.3.1.68","MetaCyc:GLUTAMINE-N-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamine N-acyltransferase activity","secondary_identifiers":["RHEA:18469"],"synonyms":[{"name":"acyl-CoA:L-glutamine N-acyltransferase activity","type":"related"}],"termid":"GO:0047946"}


id: PBO:0079530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-yW synthesizing protein 5","termid":"PBO:0079530"}


id: MONDO:0023093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"headache disorder","termid":"MONDO:0021146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exertional headache","secondary_identifiers":["UMLS:C2363911","MEDGEN:1780177"],"synonyms":[{"name":"primary Exertional headache","type":"related"},{"name":"primary headache associated with sexual activity","type":"related"}],"termid":"MONDO:0023093","xrefs":{"Monarch":{"xref_id":"0023093"}}}


id: FYPO:0006187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring assembly is normal (i.e. indistinguishable from wild type). Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["GO:1903475","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring assembly","termid":"FYPO:0001368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of actomyosin contractile ring assembly","synonyms":[{"name":"normal rate of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"normal rate of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"normal rate of contractile ring assembly","type":"exact"},{"name":"normal rate of cytokinetic contractile ring assembly","type":"exact"},{"name":"normal rate of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"normal rate of mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0006187"}


id: PBO:0041189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-transducin repeat containing E3 ubiquitin protein ligase pseudogene 1","termid":"PBO:0041189"}


id: PBO:0064603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 3 homeobox 1","termid":"PBO:0064603"}


id: PBO:0088755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone Nap2","termid":"PBO:0088755"}


id: PBO:0056275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1C member 1","termid":"PBO:0056275"}


id: MONDO:0012925
data:
  {"annotated_genes":["SJAG_04414","SJAG_00166"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85978,85979],"is_not":false,"summary":null,"term":"MONDO:0012925"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPL35A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_04414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567280","GARD:15562","NCIT:C176914","MEDGEN:382705","DOID:0111883","OMIM:612528","UMLS:C2675859"],"synonyms":[{"name":"DBA5","type":"related"},{"name":"Diamond-Blackfan Anaemia type 5","type":"exact"},{"name":"Diamond-Blackfan Anemia type 5","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPL35A","type":"exact"},{"name":"Diamond-Blackfan anemia 5","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPL35A","type":"exact"},{"name":"RPL35A Diamond-Blackfan anaemia","type":"exact"},{"name":"RPL35A Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0012925","terms_by_termid":{"MONDO:0012925":null},"xrefs":{"Monarch":{"xref_id":"0012925"}}}


id: GO:0009867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid.","definition_xrefs":["PMID:19522558","PMID:20159850","PMID:16478936","GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to jasmonic acid stimulus","termid":"GO:0071395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"jasmonic acid mediated signaling pathway","synonyms":[{"name":"JA signaling","type":"exact"},{"name":"jasmonate signaling","type":"related"},{"name":"jasmonic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009867"}


id: PBO:0051870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL LIM homeobox 2","termid":"PBO:0051870"}


id: MONDO:0018710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"macrocephaly, dysmorphic facies, and psychomotor retardation","termid":"MONDO:0014863"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalencephaly-severe kyphoscoliosis-overgrowth syndrome","secondary_identifiers":["MEDGEN:1814470","UMLS:C5681123","GARD:17805","Orphanet:457359"],"termid":"MONDO:0018710","xrefs":{"Monarch":{"xref_id":"0018710"}}}


id: PBO:0056097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 2","termid":"PBO:0056097"}


id: MONDO:0013263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PCARE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PCARE-related retinopathy","termid":"MONDO:0800404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 54","secondary_identifiers":["DOID:0110364","MEDGEN:462041","ICD10CM:H35.5","OMIM:613428","UMLS:C3150691","GARD:15662"],"synonyms":[{"name":"PCARE retinitis pigmentosa","type":"exact"},{"name":"RP54","type":"exact"},{"name":"retinitis pigmentosa 54","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PCARE","type":"exact"},{"name":"retinitis pigmentosa type 54","type":"exact"}],"termid":"MONDO:0013263","xrefs":{"Monarch":{"xref_id":"0013263"}}}


id: MONDO:0008104
data:
  {"annotated_genes":["SJAG_02342","SJAG_00993","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86483,86484,86485],"is_not":false,"summary":null,"term":"MONDO:0008104"}]},"cv_name":"mondo","definition":"Noonan syndrome caused by mutations in the PTPN11 gene.","definition_xrefs":["NCIT:C75459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"Noonan syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:7223","DOID:0060578","UMLS:C4551602","MEDGEN:1638960","OMIM:163950"],"synonyms":[{"name":"Male Turner syndrome","type":"related"},{"name":"NS1","type":"exact"},{"name":"Noonan syndrome","type":"related"},{"name":"Noonan syndrome 1","type":"exact"},{"name":"Noonan syndrome type 1","type":"exact"},{"name":"Turner phenotype with normal karyotype","type":"related"},{"name":"female pseudo-Turner syndrome","type":"related"},{"name":"pterygium colli syndrome","type":"related"}],"termid":"MONDO:0008104","terms_by_termid":{"MONDO:0008104":null},"xrefs":{"Monarch":{"xref_id":"0008104"}}}


id: PBO:0040027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 3","termid":"PBO:0040027"}


id: MONDO:0007062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, non-syndromic, terminal transverse limb reduction defect characterized by unilateral absence of the terminal portions of digits 2 to 5, with a mildly hypoplastic thumb and small nail remnants on the digital stumps. Metacarpal bones may be variably reduced.","definition_xrefs":["Orphanet:973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"adactylia, unilateral","secondary_identifiers":["MEDGEN:113098","MESH:C562417","GARD:377","OMIM:102650","UMLS:C0220660"],"synonyms":[{"name":"Adactyly of hand, unilateral","type":"exact"},{"name":"adactylia unilateral","type":"exact"},{"name":"adactylia, unilateral","type":"exact"},{"name":"congenital absence/hypoplasia of fingers excluding thumb, unilateral","type":"exact"},{"name":"digits 2-5 hypodactyly, unilateral","type":"exact"},{"name":"digits 2-5 oligodactyly, unilateral","type":"exact"},{"name":"terminal transverse defects of hand, unilateral","type":"related"}],"termid":"MONDO:0007062","xrefs":{"Monarch":{"xref_id":"0007062"}}}


id: GO:1990829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to C-rich, single-stranded DNA.","definition_xrefs":["PMID:8127654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA binding","termid":"GO:0003697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"C-rich single-stranded DNA binding","synonyms":[{"name":"C-rich ssDNA binding","type":"exact"}],"termid":"GO:1990829"}


id: PBO:0086203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; sumoylated under stress conditions in a genome wide study; YDR336W is not an essential gene","termid":"PBO:0086203"}


id: PBO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyltransferase (predicted)","termid":"PBO:0001400"}


id: PBO:0045791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER degradation enhancing alpha-mannosidase like protein 1","termid":"PBO:0045791"}


id: GO:1900586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arugosin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"arugosin metabolic process","termid":"GO:1900585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"arugosin catabolic process","synonyms":[{"name":"arugosin breakdown","type":"exact"},{"name":"arugosin catabolism","type":"exact"},{"name":"arugosin degradation","type":"exact"}],"termid":"GO:1900586"}


id: PBO:0072629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 4","termid":"PBO:0072629"}


id: FYPO:0007739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolar ring disassembly begins later than normal. Nucleolar rings are structures located at the nucleolar periphery where several nuclear factors are reversibly aggregated and sequestered during acute heat stress. They normally disassemble upon removal of heat stress.","definition_xrefs":["PMID:33176152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of nucleolar ring disassembly","synonyms":[{"name":"delayed nucleolar ring disassembly","type":"exact"},{"name":"delayed nucleolar ring disassembly during recovery from heat shock","type":"exact"},{"name":"delayed onset of NuR disassembly","type":"exact"},{"name":"delayed onset of nucleolar ring disassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of nucleolar ring disassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007739"}


id: PBO:0071889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 27","termid":"PBO:0071889"}


id: PBO:0029553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_ethyl_methanesulfonate","termid":"PBO:0029553"}


id: GO:0006000
data:
  {"annotated_genes":["SJAG_00039","SJAG_02596","SJAG_04334","SJAG_03336","SJAG_02713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88180,92062,93724,99136,100558],"is_not":false,"summary":null,"term":"GO:0006000"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null,"SJAG_04334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fructose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fructose"],"synonyms":[{"name":"fructose metabolism","type":"exact"}],"termid":"GO:0006000","terms_by_termid":{"GO:0006000":null}}


id: SO:0001367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carbamoylmethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carbamoylmethyluridine","secondary_identifiers":["RNAMOD:075"],"synonyms":[{"name":"5-carbamoylmethyluridine","type":"exact"},{"name":"five carbamoylmethyluridine","type":"exact"},{"name":"ncm5U","type":"exact"}],"termid":"SO:0001367"}


id: GO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a protein-DNA-RNA complex, resulting in the alteration of an existing complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex remodeling","termid":"GO:0001119"}


id: PBO:0028070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_aseptate_mononucleate_cell","termid":"PBO:0028070"}


id: MONDO:0017501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of both lower leg and foot","termid":"MONDO:0017444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both lower leg and foot, bilateral","secondary_identifiers":["ICD10CM:Q72.23","icd11.foundation:113051911","UMLS:C2910300","MEDGEN:1759560","Orphanet:295099"],"synonyms":[{"name":"tibiofibular terminal transverse meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017501","xrefs":{"Monarch":{"xref_id":"0017501"}}}


id: MONDO:0016499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of Guillain-Barré syndrome characterized by acute post-ganglionic sympathetic and parasympathetic failure presenting several weeks after acute infection with gastrointestinal symptoms (abdominal pain, vomiting, constipation, diarrhea, gastroparesis, ileus), orthostatic hypotension, erectile dysfunction, urinary frequency, urgency or retention, vasomotor instability with acrocyanosis and reduced salivation, lacrimation and sweating.","definition_xrefs":["Orphanet:231457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune autonomic ganglionopathy","secondary_identifiers":["UMLS:C2315246","MEDGEN:746161","GARD:20617","SCTID:430042004"],"synonyms":[{"name":"AAG","type":"exact"},{"name":"acute panautonomic GBS","type":"exact"},{"name":"acute panautonomic Guillain-Barre syndrome","type":"exact"},{"name":"acute panautonomic Guillain-Barré syndrome","type":"exact"},{"name":"acute panautonomic neuropathy","type":"exact"},{"name":"acute pandysautonomia","type":"exact"},{"name":"autoimmune autonomic neuropathy","type":"exact"},{"name":"idiopathic subacute autonomic neuropathy","type":"exact"}],"termid":"MONDO:0016499","xrefs":{"Monarch":{"xref_id":"0016499"}}}


id: PBO:0069182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 436, pseudogene","termid":"PBO:0069182"}


id: FYPO:0000082
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118399,118555],"is_not":false,"summary":null,"term":"FYPO:0000082"},{"annotations":[118631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001408"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the growth of a population of cells is decreased relative to normal in the vegetative growth phase of the life cycle at high temperatures.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04464":null,"SJAG_04697":null},"genotype_count":3,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth at high temperature","references_by_uniquename":{"PMID:28954740":null,"PMID:36058798":null,"PMID:37233261":null},"secondary_identifiers":["FYPO:0000247"],"single_locus_annotated_genes":["SJAG_04464","SJAG_04697","SJAG_02527"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","gms1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased cell population growth at high temperature during mitotic cell cycle","type":"related"},{"name":"decreased growth at high temperature","type":"broad"},{"name":"decreased vegetative cell population growth at high temperature","type":"exact"},{"name":"growth defect, slow growth at high temperatures","type":"narrow"},{"name":"heat sensitive","type":"related"},{"name":"heat sensitivity: increased","type":"related"},{"name":"hypersensitive to high temperature","type":"related"},{"name":"reduced growth at high temperature","type":"exact"},{"name":"sensitive to heat","type":"related"},{"name":"sensitive to high temperature","type":"related"},{"name":"sensitive to high temperature during vegetative growth","type":"related"},{"name":"slow growth at high temperature","type":"narrow"},{"name":"temperature sensitive","type":"related"}],"termid":"FYPO:0000082","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000117":null,"FYECO:0000137":null,"FYPO:0000082":null,"FYPO:0001408":null,"FYPO_EXT:0000002":null}}


id: GO:0032868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to insulin","synonyms":[{"name":"response to insulin stimulus","type":"exact"}],"termid":"GO:0032868"}


id: FYPO:0008069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at the mating type locus is observed over an increased portion of the mating-type region.","definition_xrefs":["PMID:18030666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at mating type locus during vegetative growth","termid":"FYPO:0005065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased spatial extent of histone H3-K9 methylation at mating type locus during vegetative growth","termid":"FYPO:0008069"}


id: GO:0060159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a dopamine receptor signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of dopamine receptor signaling pathway","synonyms":[{"name":"regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060159"}


id: MONDO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"lagophthalmos","secondary_identifiers":["DOID:12959","icd11.foundation:1200365909","ICD9:374.2","ICD10CM:H02.2","ICD9:374.20","UMLS:C0152226","SCTID:60735000","MEDGEN:57517"],"termid":"MONDO:0001604","xrefs":{"Monarch":{"xref_id":"0001604"}}}


id: PBO:0075340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase","termid":"PBO:0075340"}


id: GO:0047722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(indol-3-yl)lactate + NAD+ = 3-(indol-3-yl)pyruvate + H+ + NADH.","definition_xrefs":["RHEA:20133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indolelactate dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R01971","MetaCyc:INDOLELACTATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(indol-3-yl)lactate:NAD+ oxidoreductase activity","type":"related"},{"name":"indole-3-lactate dehydrogenase activity","type":"exact"},{"name":"indolelactate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047722"}


id: MONDO:0011364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the STRC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 16","secondary_identifiers":["MEDGEN:350211","UMLS:C1863561","MESH:C566339","OMIM:603720","DOID:0110471","GARD:22597"],"synonyms":[{"name":"DFNB16","type":"narrow"},{"name":"STRC autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in STRC","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 16","type":"exact"},{"name":"deafness, autosomal recessive 16","type":"narrow"},{"name":"deafness, autosomal recessive type 16","type":"narrow"}],"termid":"MONDO:0011364","xrefs":{"Monarch":{"xref_id":"0011364"}}}


id: PBO:0000895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Rst2","termid":"PBO:0000895"}


id: GO:0075331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of formation of structure involved in a symbiotic process","termid":"GO:0044147"},{"relation_name":"is_a","term_name":"regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075329"},{"relation_name":"negatively_regulates","term_name":"formation of arbuscule for nutrient acquisition","termid":"GO:0075328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075331"}


id: PR:P87136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.05","synonyms":[{"name":"Spom972h-SPAC57A7.05","type":"exact"}],"termid":"PR:P87136"}


id: MONDO:0008554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential thrombocythemia","termid":"MONDO:0005029"},{"relation_name":"is_a","term_name":"familial thrombocytosis","termid":"MONDO:0019111"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocythemia 1","secondary_identifiers":["MEDGEN:479301","OMIM:187950","UMLS:C3277671"],"synonyms":[{"name":"THCYT1","type":"related"},{"name":"thrombocythemia 1","type":"exact"},{"name":"thrombocythemia type 1","type":"exact"},{"name":"thrombocythemia, somatic","type":"exact"},{"name":"thrombocytosis 1","type":"related"}],"termid":"MONDO:0008554","xrefs":{"Monarch":{"xref_id":"0008554"}}}


id: GO:0141051
data:
  {"annotated_genes":["SJAG_04039","SJAG_00581","SJAG_03627","SJAG_04186","SJAG_01075"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[96417,108624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[89265,103374,113558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[108625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[108626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"}]},"cv_name":"molecular_function","definition":"Removal of an acetyl group from a lysine residue in a histone H4.","definition_xrefs":["PMID:12590135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_01075":null,"SJAG_03627":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0003824","GO:0019213","GO:0003674","GO:0033558","GO:0140096"],"is_obsolete":false,"name":"histone H4K deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141051","terms_by_termid":{"GO:0034739":null,"GO:0046970":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null}}


id: PR:P40996
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scd2 gene.","definition_xrefs":["UniProtKB:P40996","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein scd2/ral3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.07","synonyms":[{"name":"Spom972h-scd2","type":"exact"}],"termid":"PR:P40996"}


id: PBO:0055829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 4","termid":"PBO:0055829"}


id: SO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding methionyl tRNA (SO:0000266).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine_tRNA_primary_transcript","synonyms":[{"name":"methionine tRNA primary transcript","type":"exact"}],"termid":"SO:0000223"}


id: PBO:0072618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSPH1 divergent transcript","termid":"PBO:0072618"}


id: PBO:0034132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_modifier","termid":"PBO:0034132"}


id: PBO:0043653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 3","termid":"PBO:0043653"}


id: PBO:0042726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein C pseudogene 1","termid":"PBO:0042726"}


id: MONDO:0100158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of presentations resulting from biallelic protein-altering variation in CHRNG. Inactivation of the receptor during early development leads to prenatal hypo-akinesia; subsequent phenotypes are a consequence of this hypo-akinesia and are thought to be dependent upon timing and severity of the anomaly at the neuromuscular junction. A range of phenotypes varying in severity (including both lethal and non-lethal presentations) have been reported, but typically include joint contractures, pterygia, dysmorphic features, vertebral and thoracic anomalies, and additional variable abnormalities. There are no clear genotype-phenotype correlations between the lethal and non-lethal presentations of this spectrum; both inter- and intra-familial variability have been reported, with the same variants being observed in both lethal and non-lethal cases.","definition_xrefs":["PMID:16826531","PMID:30868735","PMID:22167768","PMID:16826520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple pterygium syndrome","termid":"MONDO:0017415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRNG-associated hypo-akinesia disorder of prenatal onset","termid":"MONDO:0100158","xrefs":{"Monarch":{"xref_id":"0100158"}}}


id: PBO:0089867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3","termid":"PBO:0089867"}


id: PBO:0088032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin activating enzyme (E1); involved in ubiquitin-mediated protein degradation and essential for viability; protein abundance increases in response to DNA replication stress","termid":"PBO:0088032"}


id: MONDO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile dermatomyositis (obsolete MONDO:0005054)","termid":"MONDO:0005054","xrefs":{"Monarch":{"xref_id":"0005054"}}}


id: PBO:0080653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 pseudogene 2","termid":"PBO:0080653"}


id: PBO:0051790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing G","termid":"PBO:0051790"}


id: GO:0008231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a heterodimer of Ecdysone receptor (EcR) and ultraspiracle (usp) plus an associated corepressor such as SMRTER, which represses transcription of target genes.","definition_xrefs":["PMID:10488333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ecdysone receptor holocomplex","termid":"GO:0008230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"repressor ecdysone receptor complex","synonyms":[{"name":"repressor ecdysone receptor holocomplex","type":"related"}],"termid":"GO:0008231"}


id: PBO:0063264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 10","termid":"PBO:0063264"}


id: GO:0051249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte activation","termid":"GO:0051249"}


id: GO:0050208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an alpha-2,8-linked polymer of sialic acid = CoA + polysialic acid acetylated at O-7 or O-9.","definition_xrefs":["EC:2.3.1.136","MetaCyc:POLYSIALIC-ACID-O-ACETYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"polysialic-acid O-acetyltransferase activity","secondary_identifiers":["RHEA:11604"],"synonyms":[{"name":"acetyl-CoA:polysialic-acid O-acetyltransferase activity","type":"exact"}],"termid":"GO:0050208"}


id: MONDO:0003798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epithelioid sarcoma (obsolete MONDO:0003798)","termid":"MONDO:0003798","xrefs":{"Monarch":{"xref_id":"0003798"}}}


id: GO:0031175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"},{"relation_name":"part_of","term_name":"neuron development","termid":"GO:0048666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection development","synonyms":[{"name":"neurite biosynthesis","type":"narrow"},{"name":"neurite development","type":"narrow"},{"name":"neurite formation","type":"narrow"},{"name":"neurite growth","type":"narrow"},{"name":"neurite outgrowth","type":"narrow"}],"termid":"GO:0031175"}


id: PBO:0078877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA phosphotransferase 1","termid":"PBO:0078877"}


id: PBO:0004958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator related","termid":"PBO:0004958"}


id: MONDO:0011344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parotitis, juvenile recurrent","secondary_identifiers":["OMIM:603588","MEDGEN:350954","MESH:C566359","UMLS:C1863691"],"synonyms":[{"name":"parotitis, juvenile recurrent","type":"exact"}],"termid":"MONDO:0011344","xrefs":{"Monarch":{"xref_id":"0011344"}}}


id: GO:0019324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-lyxose, the L-enantiomer of aldopentose lyxo-pentose, the C-2 epimer of xylose.","definition_xrefs":["GOC:jsg","ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-lyxose metabolic process","secondary_identifiers":["MetaCyc:LYXMET-PWY"],"synonyms":[{"name":"L-lyxose metabolism","type":"exact"}],"termid":"GO:0019324"}


id: MONDO:0005249
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"}]},"cv_name":"mondo","definition":"An acute, acute and chronic, or chronic inflammation focally or diffusely affecting the lung parenchyma, caused by an infection in one or both of the lungs (by bacteria, viruses, fungi, or mycoplasma.). Symptoms include cough, shortness of breath, fevers, chills, chest pain, headache, sweating, and weakness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"pneumonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:10813","UMLS:C0032285","ICD9:486","DOID:552","ICD9:483","ICD9:483.8","ICD10CM:J18.9","EFO:0003106","icd11.foundation:142052508","ICD9:484.8","MESH:D011014","NCIT:C3333","ICD10CM:J15","SCTID:233604007"],"synonyms":[{"name":"acute pneumonia","type":"narrow"}],"termid":"MONDO:0005249","terms_by_termid":{"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0005249"}}}


id: PBO:0064092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITPNM family member 3","termid":"PBO:0064092"}


id: PBO:0049577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone A","termid":"PBO:0049577"}


id: PBO:0036480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly factor 4 Sdh8 (predicted)","termid":"PBO:0036480"}


id: PBO:0018234
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory chain defects","termid":"PBO:0018234"}


id: GO:0016749
data:
  {"annotated_genes":["SJAG_00097","SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94973,77715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003870"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"succinyltransferase activity","termid":"GO:0016748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"N-succinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016749","terms_by_termid":{"GO:0003870":null}}


id: FYPO:0007231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell is viable, and grows in the form of a spindle.","definition_xrefs":["PomBase:mah","PMID:22137473"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spindle-shaped cell","termid":"FYPO:0007230"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"},{"relation_name":"is_a","term_name":"spindle-shaped cell","termid":"FYPO:0007230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"viable spindle-shaped cell","synonyms":[{"name":"viable spindle-shaped cell during mitotic cell cycle","type":"related"},{"name":"viable spindle-shaped cell during vegetative growth","type":"exact"},{"name":"viable spindle-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0007231"}


id: FYPO:0003957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of two methyl groups to the N2 position of a guanine residue in a tRNA molecule is abolished. Normally, two methyl groups are transferred to the G26 residue.","definition_xrefs":["PMID:10611485","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished tRNA guanosine N2,N2-dimethylation","synonyms":[{"name":"abolished tRNA N2,N2-dimethylguanosine formation","type":"exact"},{"name":"abolished tRNA N2-guanine dimethylation","type":"exact"},{"name":"abolished tRNA N2-guanine methylation","type":"related"},{"name":"abolished tRNA dimethylation at N2 on G26","type":"narrow"},{"name":"abolished tRNA guanosine N2,N2-dimethylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA guanosine N2,N2-dimethylation during vegetative growth","type":"exact"},{"name":"abolished tRNA m2,2G formation","type":"exact"},{"name":"tRNA guanosine N2,N2-dimethylation abolished","type":"exact"}],"termid":"FYPO:0003957"}


id: MONDO:0016821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shoulder and girdle defects-familial intellectual disability syndrome","secondary_identifiers":["Orphanet:2580"],"synonyms":[{"name":"shoulder girdle defect intellectual disability familial","type":"related"},{"name":"shoulder girdle defect mental retardation familial","type":"related"}],"termid":"MONDO:0016821","xrefs":{"Monarch":{"xref_id":"0016821"}}}


id: PBO:0053247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 2","termid":"PBO:0053247"}


id: PBO:0066028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 17","termid":"PBO:0066028"}


id: PBO:0074092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 7","termid":"PBO:0074092"}


id: PBO:0031544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_to_vacuole","termid":"PBO:0031544"}


id: GO:2000496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000495"},{"relation_name":"negatively_regulates","term_name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000496"}


id: PBO:0084850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; involved together with Mrpl35p in assembly of cytochrome c oxidase","termid":"PBO:0084850"}


id: PBO:0113048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome linkage inner nuclear membrane protein; CLIP, involved in perinuclear chromosome tethering and rDNA repeat stability; involved in regulating mitotic exit; dephosphorylated by Cdc14p in anaphase, which promotes timely rDNA segregation and allows mitotic progression; interacts with Csm1p and Lrs4p; null mutant has elevated levels of unequal sister-chromatid exchange; GFP-fusion protein localizes to the nuclear periphery; Cdc28p substrate","termid":"PBO:0113048"}


id: PR:Q9P7E0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- qcr10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7E0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.08","synonyms":[{"name":"Spom972h-qcr10","type":"exact"},{"name":"complex III subunit 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex subunit qcr10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7E0"}


id: MOD:01485
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["Unimod:532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(18)O isotope tagged reagent","termid":"MOD:01430"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass diferences that are nominally equal at 144.099-144.106 Da.","termid":"MOD:01516"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated residue","termid":"MOD:01518"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 114","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ114","type":"related"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01485"}


id: PBO:0087537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA comprises Nat1p, Ard1p, Nat5p; acetylates many proteins to influence telomeric silencing, cell cycle, heat-shock resistance, mating, sporulation, early stages of mitophagy; protein abundance increases under DNA replication stress; mutations in human homolog X-linked NAA10 lead to Ogden syndrome (S37P) and intellectual disability (R116W); expression of human NAA10 and NAA15 can complement ard1 nat1 double mutant","termid":"PBO:0087537"}


id: GO:0017145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types.","definition_xrefs":["ISBN:0582227089","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell division","synonyms":[{"name":"stem cell renewal","type":"exact"}],"termid":"GO:0017145"}


id: SO:1000069
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the deletion of two nucleotides.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000069 sequence_variant_causing_minus_2_frameshift (obsolete SO:1000069)","synonyms":[{"name":"minus 2 frameshift mutation","type":"exact"},{"name":"sequence variant causing minus 2 frameshift","type":"exact"}],"termid":"SO:1000069"}


id: PR:O14336
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug80 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 80 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.03","synonyms":[{"name":"Spom972h-mug80","type":"exact"}],"termid":"PR:O14336"}


id: PR:O94238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11127:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.13","secondary_identifiers":["UniProtKB:O94238"],"synonyms":[{"name":"SPAC1805.13","type":"related"},{"name":"Spom972h-RPL14","type":"exact"}],"termid":"PR:O94238"}


id: GO:0097186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of tooth enamel, occurring in two stages: secretory stage and maturation stage.","definition_xrefs":["GOC:cjm","GOC:sl","PMID:21196346","PMID:10206335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amelogenesis","synonyms":[{"name":"enamel development","type":"exact"}],"termid":"GO:0097186"}


id: MOD:02030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively specifies the boundary conformation of two adjacent source amino acid residues, the second (C-term side) being a L-proline, where the carbonyl group of the amide bond of the N-side of the L-proline is positioned such that the organodiyl group is in the trans orientation (omega=180)","definition_xrefs":["PubMed:15311922","ChEBI:83834","PubMed:15735342","PubMed:5485910","PubMed:24116866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-peptidyl-L-proline","termid":"MOD:02030"}


id: PBO:0068532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 133, pseudogene","termid":"PBO:0068532"}


id: GO:0018444
data:
  {"annotated_genes":["SJAG_00338","SJAG_01696"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90298,90299,116624],"is_not":false,"summary":null,"term":"GO:0018444"}]},"cv_name":"cellular_component","definition":"A heterodimeric complex involved in the release of a nascent polypeptide chain from a ribosome.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00338":null,"SJAG_01696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"translation release factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eukaryotic peptide chain release factor","type":"exact"},{"name":"peptide chain release factor","type":"broad"}],"termid":"GO:0018444","terms_by_termid":{"GO:0018444":null}}


id: PBO:0046551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 5","termid":"PBO:0046551"}


id: PBO:0111791
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APSES domain","termid":"PBO:0111791"}


id: PBO:0109813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Mdm31, mitochondrion inheritance factor, interacts with ERMES","termid":"PBO:0109813"}


id: PBO:0077774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 1","termid":"PBO:0077774"}


id: GO:0032799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving low-density lipoprotein receptors.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor metabolic process","termid":"GO:0043112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein receptor particle metabolic process","synonyms":[{"name":"LDL receptor metabolic process","type":"exact"},{"name":"low-density lipoprotein receptor metabolic process","type":"exact"},{"name":"low-density lipoprotein receptor metabolism","type":"exact"}],"termid":"GO:0032799"}


id: MOD:00911
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-leucine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-leucine residue","synonyms":[{"name":"ModLeu","type":"exact"}],"termid":"MOD:00911"}


id: MONDO:0010689
data:
  {"annotated_genes":["SJAG_02016"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84704],"is_not":false,"summary":null,"term":"MONDO:0010689"}]},"cv_name":"mondo","definition":"X-linked Charcot-Marie-Tooth disease type 4 is a rare, genetic, axonal, peripheral sensorimotor neuropathy characterized by an X-linked recessive inheritance pattern and the neonatal- to early childhood-onset of severe, slowly progressive, distal muscle weakness and atrophy (in particular of the peroneal group), as well as sensory impairment (with the lower extremities being more affected than the upper extremities), pes cavus, areflexia and hammertoes. Sensorineural hearing loss and cognitive impairment may also be associated. Females are asymptomatic and do not display the phenotype.","definition_xrefs":["Orphanet:101078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type X","termid":"MONDO:0018994"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease X-linked recessive 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:763400005","UMLS:C0795910","DOID:0110212","MEDGEN:162891","OMIM:310490","GARD:1240"],"synonyms":[{"name":"CMT4X","type":"exact"},{"name":"CMTX 4","type":"exact"},{"name":"CMTX4","type":"exact"},{"name":"COWCK","type":"exact"},{"name":"Charcot-Marie-Tooth disease X-linked recessive type 4","type":"exact"},{"name":"Charcot-Marie-Tooth disease with deafness and intellectual disability","type":"exact"},{"name":"Charcot-Marie-Tooth disease with deafness and mental retardation","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked recessive, 4","type":"exact"},{"name":"Cowchock syndrome, X-linked recessive","type":"exact"},{"name":"NADMR","type":"exact"},{"name":"NAMSD","type":"exact"},{"name":"X-linked Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"axonal motor sensory neuropathy with deafness and intellectual disability","type":"exact"},{"name":"axonal motor sensory neuropathy with deafness and mental retardation","type":"exact"},{"name":"cowchock syndrome","type":"exact"},{"name":"neuropathy, axonal motor-sensory with deafness and intellectual disability","type":"related"},{"name":"neuropathy, axonal motor-sensory with deafness and mental retardation","type":"related"},{"name":"neuropathy, axonal motor-sensory, with deafness and intellectual disability","type":"related"},{"name":"neuropathy, axonal motor-sensory, with deafness and mental retardation","type":"related"}],"termid":"MONDO:0010689","terms_by_termid":{"MONDO:0010689":null},"xrefs":{"Monarch":{"xref_id":"0010689"}}}


id: GO:0071712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation.","definition_xrefs":["PMID:19520858","PMID:14607247"],"gene_count":0,"genotype_count":0,"name":"obsolete ER-associated misfolded protein catabolic process (obsolete GO:0071712)","synonyms":[{"name":"endoplasmic reticulum-associated misfolded protein catabolism","type":"exact"}],"termid":"GO:0071712"}


id: GO:0033027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of mast cell apoptotic process","termid":"GO:0033025"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"positively_regulates","term_name":"mast cell apoptotic process","termid":"GO:0033024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell apoptotic process","synonyms":[{"name":"activation of mast cell apoptosis","type":"narrow"},{"name":"positive regulation of mast cell apoptosis","type":"narrow"},{"name":"stimulation of mast cell apoptosis","type":"narrow"},{"name":"up regulation of mast cell apoptosis","type":"exact"},{"name":"up-regulation of mast cell apoptosis","type":"exact"},{"name":"upregulation of mast cell apoptosis","type":"exact"}],"termid":"GO:0033027"}


id: FYPO:0007963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is normal (i.e. the same as in wild-type cells) during nitrogen limitation or poor nitrogen source.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mating efficiency","termid":"FYPO:0001147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal mating efficiency during nitrogen stress","termid":"FYPO:0007963"}


id: MONDO:0016210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"alternating hemiplegia","secondary_identifiers":["GARD:20446","UMLS:C0278110","MEDGEN:124456","Orphanet:209978","icd11.foundation:774373615","SCTID:404689008"],"termid":"MONDO:0016210","xrefs":{"Monarch":{"xref_id":"0016210"}}}


id: FYPO:0006426
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal attachment of spindle microtubules to kinetochore during meiosis I","synonyms":[{"name":"normal attachment of spindle microtubules to kinetochore during first meiotic nuclear division","type":"exact"},{"name":"normal attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"normal attachment of spindle microtubules to meiosis I kinetochore","type":"exact"},{"name":"normal kinetochore mono-orientation at meiosis I","type":"exact"},{"name":"normal sister kinetochore mono-orientation","type":"exact"}],"termid":"FYPO:0006426"}


id: MONDO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe condition resulting from bacteria invading healthy muscle from adjacent traumatized muscle or soft tissue. The infection originates in a wound contaminated with bacteria of the genus clostridium. C. perfringens accounts for the majority of cases (over eighty percent), while C. noyvi, C. septicum, and C. histolyticum cause most of the other cases.","definition_xrefs":["MESH:D005738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"infection due to clostridium perfringens","termid":"MONDO:0023149"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gas gangrene","secondary_identifiers":["ICD9:040.0","MEDGEN:8959","DOID:9159","EFO:0007279","ICD10CM:A48.0","SCTID:80466000","icd11.foundation:1920227791","UMLS:C0017105"],"synonyms":[{"name":"gas bacillus infection","type":"exact"},{"name":"gas gangrene","type":"exact"},{"name":"myonecrosis","type":"exact"}],"termid":"MONDO:0005767","xrefs":{"Monarch":{"xref_id":"0005767"}}}


id: GO:0002393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of lysosomal enzymes following a stimulus as part of a inflammatory response, resulting in an increase in intracellular or extracellular levels.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosomal enzyme production involved in inflammatory response","synonyms":[{"name":"lysosomal enzyme production involved in acute inflammatory response","type":"broad"},{"name":"production of lysosomal enzymes involved in acute inflammatory response","type":"broad"},{"name":"production of lysosomal enzymes involved in inflammatory response","type":"exact"}],"termid":"GO:0002393"}


id: GO:0072595
data:
  {"annotated_genes":["SJAG_01001"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"}]},"cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location a specific location on or in an organelle, and is prevented from moving elsewhere. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"},{"relation_name":"part_of","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein localization in organelle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of protein localisation to organelle","type":"exact"},{"name":"maintenance of protein localization to organelle","type":"exact"}],"termid":"GO:0072595","terms_by_termid":{"GO:0006621":null}}


id: SO:0001447
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar amino acid encoded by the codons TGT and TGC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine","synonyms":[{"name":"C","type":"exact"},{"name":"Cys","type":"exact"}],"termid":"SO:0001447"}


id: GO:0160183
data:
  {"annotated_genes":["SJAG_03170","SJAG_04991","SJAG_03435","SJAG_01073","SJAG_00079","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103555,98595,89621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140506"},{"annotations":[88257,89176,113672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140580"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a target membrane and an autophagosome during autophagy.","definition_xrefs":["PMID:30544615","PMID:36635405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00079":null,"SJAG_01073":null,"SJAG_03170":null,"SJAG_03435":null,"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"autophagosome-membrane adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160183","terms_by_termid":{"GO:0140506":null,"GO:0140580":null}}


id: MONDO:0024281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of conditions used to describe polyarthritis occurring in children.","definition_xrefs":["NCIT:C26979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyarticular arthritis","termid":"MONDO:0024280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile chronic polyarthritis","secondary_identifiers":["MEDGEN:140816","UMLS:C0409667"],"synonyms":[{"name":"juvenile chronic polyarthritis","type":"exact"}],"termid":"MONDO:0024281","xrefs":{"Monarch":{"xref_id":"0024281"}}}


id: FYPO:0003159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP (cAMP) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular cAMP level","termid":"FYPO:0001660"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"cAMP absent from cell","synonyms":[{"name":"cyclic AMP absent from cell","type":"exact"}],"termid":"FYPO:0003159"}


id: GO:0043510
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta-B subunits (sometimes known as activin beta-B or activin/inhibin beta-B).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin complex","termid":"GO:0048180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"activin B complex","secondary_identifiers":["GO:0048182"],"termid":"GO:0043510"}


id: PR:P87057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nhp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-histone chromosomal protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.09c","synonyms":[{"name":"Spom972h-nhp6","type":"exact"}],"termid":"PR:P87057"}


id: PBO:0034277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_location","termid":"PBO:0034277"}


id: MONDO:0005267
data:
  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disease involving the heart and/or pericardium.","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular 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disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:429.89","ICD9:V47.2","DOID:114","ICD9:429.9","MEDGEN:5458","NCIT:C3079","SCTID:56265001","EFO:0003777","MESH:D006331","UMLS:C0018799"],"synonyms":[{"name":"cardiac disease","type":"exact"},{"name":"disease of heart","type":"exact"},{"name":"disease or disorder of heart","type":"exact"},{"name":"disorder of heart","type":"exact"},{"name":"disorder of heart/pericardium","type":"exact"},{"name":"heart disease","type":"exact"},{"name":"heart disease or disorder","type":"exact"},{"name":"heart disorder","type":"exact"},{"name":"heart trouble","type":"exact"},{"name":"heart/pericardial disease","type":"exact"},{"name":"heart/pericardial disease or disorder","type":"exact"},{"name":"heart/pericardial disorder","type":"exact"},{"name":"heart/pericardial trouble","type":"exact"}],"termid":"MONDO:0005267","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008409":null,"MONDO:0008542":null,"MONDO:0008644":null,"MONDO:0008647":null,"MONDO:0008685":null,"MONDO:0008922":null,"MONDO:0009026":null,"MONDO:0009290":null,"MONDO:0009867":null,"MONDO:0009935":null,"MONDO:0010221":null,"MONDO:0010711":null,"MONDO:0010788":null,"MONDO:0010946":null,"MONDO:0011451":null,"MONDO:0012011":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012556":null,"MONDO:0012557":null,"MONDO:0012637":null,"MONDO:0012728":null,"MONDO:0012799":null,"MONDO:0012808":null,"MONDO:0013011":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0013198":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013339":null,"MONDO:0013367":null,"MONDO:0013529":null,"MONDO:0013567":null,"MONDO:0013769":null,"MONDO:0013770":null,"MONDO:0013966":null,"MONDO:0013968":null,"MONDO:0014051":null,"MONDO:0014073":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0014340":null,"MONDO:0014548":null,"MONDO:0014550":null,"MONDO:0014558":null,"MONDO:0014667":null,"MONDO:0014668":null,"MONDO:0014784":null,"MONDO:0014881":null,"MONDO:0014976":null,"MONDO:0015001":null,"MONDO:0030077":null,"MONDO:0030300":null,"MONDO:0030330":null,"MONDO:0032592":null,"MONDO:0032915":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:0859173":null,"MONDO:0859358":null,"MONDO:0859368":null,"MONDO:0957545":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0005267"}}}


id: GO:0019158
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93734,97196],"is_not":false,"summary":null,"term":"GO:0019158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-mannose = ADP + D-mannose 6-phosphate.","definition_xrefs":["EC:2.7.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexokinase activity","termid":"GO:0004396"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"mannokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:MANNKIN-RXN","RHEA:11028","Reactome:R-HSA-9909159"],"synonyms":[{"name":"ATP:D-mannose 6-phosphotransferase activity","type":"related"},{"name":"D-fructose (D-mannose) kinase activity","type":"related"},{"name":"mannokinase (phosphorylating)","type":"related"}],"termid":"GO:0019158","terms_by_termid":{"GO:0019158":null}}


id: PBO:0082858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); hydrophilic homodimeric protein that acts in conjunction with SNARE proteins in targeting and fusion of ER to Golgi transport vesicles","termid":"PBO:0082858"}


id: PBO:0063669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 1","termid":"PBO:0063669"}


id: GO:0004745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinol--[retinol-binding protein] + NAD+ = all-trans-retinal--[retinol-binding protein] + H+ + NADH. Recognizes the substrate both in free form and when bound to cellular-retinol-binding-protein (CRBP1), but has higher affinity for the bound form.","definition_xrefs":["RHEA:48488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"all-trans-retinol dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-2454081","Reactome:R-HSA-5362564","Reactome:R-HSA-5362721","Reactome:R-HSA-2466832","Reactome:R-HSA-5362518","EC:1.1.1.105","MetaCyc:RETINOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"all-trans retinol dehydrogenase activity","type":"broad"},{"name":"retinal reductase activity","type":"broad"},{"name":"retinene reductase activity","type":"broad"},{"name":"retinol (vitamin A1) dehydrogenase activity","type":"broad"},{"name":"retinol dehydrogenase activity","type":"broad"}],"termid":"GO:0004745"}


id: GO:0046037
data:
  {"annotated_genes":["SJAG_04634","SJAG_06634","SJAG_00964","SJAG_04849","SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63871,101420],"is_not":false,"summary":null,"term":"GO:0046037"},{"annotations":[59180,107423,100378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[92949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GMP, guanosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_01298":null,"SJAG_04634":null,"SJAG_04849":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"GMP metabolism","type":"exact"}],"termid":"GO:0046037","terms_by_termid":{"GO:0006177":null,"GO:0032263":null,"GO:0046037":null}}


id: SO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a kind of homology where divergence occurred after a duplication event.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous","termid":"SO:0000857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous","termid":"SO:0000859"}


id: FYPO:0001771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}


id: MONDO:0800437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition characterized by the association of hypotonia, Moebius sequence (bilateral congenital facial palsy with impairment of ocular abduction), Pierre-Robin sequence (micrognathia, glossoptosis, and high-arched or cleft palate), unusual face, and growth delay.","definition_xrefs":["Orphanet:1358"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"obsolete Mendelian syndromes with cleft lip/palate (obsolete MONDO:0015335)","termid":"MONDO:0015335"},{"relation_name":"is_a","term_name":"Carey-Fineman-Ziter syndrome","termid":"MONDO:0031415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carey-Fineman-Ziter syndrome 1","secondary_identifiers":["ICD9:359.89","MEDGEN:1804638","MESH:C536102","OMIM:254940","SCTID:429753001","UMLS:C5676876","DOID:0080194"],"synonyms":[{"name":"CFZS","type":"related"},{"name":"CFZS1","type":"exact"},{"name":"Carey Fineman Ziter syndrome","type":"related"},{"name":"Carey-Fineman-Ziter syndrome 1","type":"exact"},{"name":"Moebius sequence, Robin complex, and hypotonia","type":"related"},{"name":"congenital nonprogressive myopathy with Moebius and Robin sequences","type":"related"},{"name":"myopathy, congenital nonprogressive with Moebius and Robin sequences","type":"related"},{"name":"myopathy, congenital nonprogressive, with Moebius sequence and Robin sequence","type":"exact"},{"name":"myopathy-Moebius-Robin syndrome","type":"exact"}],"termid":"MONDO:0800437","xrefs":{"Monarch":{"xref_id":"0800437"}}}


id: MONDO:0043257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus foliaceus","termid":"MONDO:0019324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"pemphigus and fogo selvagem","secondary_identifiers":["HGNC:3048","MESH:C535551","MEDGEN:120470","Orphanet:636955","SCTID:46459009","GARD:7353","UMLS:C0263314"],"synonyms":[{"name":"Brazilian pemphigus","type":"related"},{"name":"Brazilian pemphigus foliaceus","type":"exact"},{"name":"FS","type":"related"},{"name":"South American pemphigus","type":"related"},{"name":"amendola's syndrome","type":"related"},{"name":"endemic pemphigus foliaceus","type":"related"},{"name":"fogo selvagem","type":"related"},{"name":"wild fire","type":"related"},{"name":"wildfire pemphigus","type":"related"}],"termid":"MONDO:0043257","xrefs":{"Monarch":{"xref_id":"0043257"}}}


id: PBO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein","termid":"PBO:0018275"}


id: PBO:0043484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cannabinoid receptor 2","termid":"PBO:0043484"}


id: FYPO:0001554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA processing is abnormal. tRNA processing is the conversion a primary tRNA transcript into a mature tRNA molecules.","definition_xrefs":["PomBase:mah","GO:0008033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal tRNA processing","synonyms":[{"name":"abnormal tRNA processing during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001554"}


id: PBO:0082886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with cyclin-dependent kinase Pho85p; regulates the response to nutrient levels and environmental conditions, including the response to phosphate limitation and stress-dependent calcium signaling","termid":"PBO:0082886"}


id: PBO:0012827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-added_during","termid":"PBO:0012827"}


id: FYPO:0004828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to nucleus during mitosis","synonyms":[{"name":"normal protein localisation to nucleus during mitosis","type":"exact"},{"name":"normal protein localization to nucleus during mitosis during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during mitotic M phase","type":"related"},{"name":"normal protein localization to nucleus during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004828"}


id: MONDO:0010443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"RPGR-related retinopathy","termid":"MONDO:0100437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular degeneration, X-linked atrophic","secondary_identifiers":["OMIM:300834","UMLS:C3151784","GARD:15268","MEDGEN:463134","DOID:0112157"],"synonyms":[{"name":"macular degeneration, X-linked atrophic","type":"exact"},{"name":"macular degeneration, X-linked atrophic, X-linked recessive","type":"exact"}],"termid":"MONDO:0010443","xrefs":{"Monarch":{"xref_id":"0010443"}}}


id: PBO:0036235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP complex poly(A) polymerase subunit Cid14","termid":"PBO:0036235"}


id: PBO:0111065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huamn GCFC2 ortholog","termid":"PBO:0111065"}


id: GO:0097057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising tumor necrosis factor (TNF) receptor-associated factor 2 (TRAF2) and glutathione S-transferase pi 1 (GSTP1). This complex is thought to disrupt the TNF signaling cascade, thus down-regulating inflammatory responses.","definition_xrefs":["PMID:16636664","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TRAF2-GSTP1 complex","termid":"GO:0097057"}


id: PBO:0066355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 2","termid":"PBO:0066355"}


id: PBO:0054167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1538","termid":"PBO:0054167"}


id: GO:0030381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the structural pattern of a chorion-containing eggshell such as those found in insects.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"chorion-containing eggshell formation","termid":"GO:0007304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorion-containing eggshell pattern formation","termid":"GO:0030381"}


id: PBO:0058477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5584","termid":"PBO:0058477"}


id: PATO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence quality inhering in a bearer by virtue of the bearer's having a course that occurs occasionally.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic","termid":"PATO:0002630"}


id: PR:O42909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized zinc-type alcohol dehydrogenase-like protein YdjL that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C16A3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.02c","secondary_identifiers":["UniProtKB:O42909"],"synonyms":[{"name":"Spom972h-ydjL","type":"exact"}],"termid":"PR:O42909"}


id: MONDO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the gallbladder. It is characterized by the presence of extracellular mucin that constitutes more than fifty-percent of the tumor.","definition_xrefs":["NCIT:C5744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"gallbladder adenocarcinoma","termid":"MONDO:0006215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder mucinous adenocarcinoma","secondary_identifiers":["UMLS:C1333750","DOID:6998","MEDGEN:234292"],"synonyms":[{"name":"colloid carcinoma of gallbladder","type":"exact"},{"name":"colloid carcinoma of the gallbladder","type":"exact"},{"name":"colloidal carcinoma of gallbladder","type":"exact"},{"name":"colloidal carcinoma of the gallbladder","type":"exact"},{"name":"gall bladder mucinous adenocarcinoma","type":"exact"},{"name":"gallbladder colloid carcinoma","type":"exact"},{"name":"gallbladder colloidal carcinoma","type":"exact"},{"name":"gallbladder mucinous adenocarcinoma","type":"exact"},{"name":"gallbladder mucinous carcinoma","type":"related"},{"name":"mucinous carcinoma of gallbladder","type":"exact"},{"name":"mucinous carcinoma of the gallbladder","type":"exact"}],"termid":"MONDO:0004067","xrefs":{"Monarch":{"xref_id":"0004067"}}}


id: GO:0097016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a L27 domain of a protein. L27 is composed of conserved negatively charged amino acids and a conserved aromatic amino acid. L27 domains can assemble proteins involved in signaling and establishment and maintenance of cell polarity into complexes by interacting in a heterodimeric manner.","definition_xrefs":["GOC:BHF","Prosite:PDOC51022","PMID:15241471","PMID:17237226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"L27 domain binding","termid":"GO:0097016"}


id: FYPO:0000487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased meiotic recombination","synonyms":[{"name":"meiotic recombination: increased","type":"related"}],"termid":"FYPO:0000487"}


id: PBO:0029698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_multiseptate_vegetative_cell","termid":"PBO:0029698"}


id: GO:0086005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a ventricular cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}


id: FYPO:0002180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which cells in the population are viable, some cells are longer than normal, and the rest of the cells are of normal morphology (i.e. size, shape, and structure).","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable mixed vegetative cell population including cell with normal morphology and long cells (obsolete FYPO:0002180)","synonyms":[{"name":"long low penetrance","type":"related"}],"termid":"FYPO:0002180"}


id: MOD:00074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to N-methyl-L-phenylalanine.","definition_xrefs":["RESID:AA0065","PubMed:413571","PubMed:2577730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated phenylalanine","termid":"MOD:01063"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-phenylalanine","synonyms":[{"name":"(2S)-2-methylamino-3-phenylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylphenylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-phenylalanine","type":"exact"},{"name":"N-methylated L-phenylalanine","type":"exact"},{"name":"N-methylphenylalanine","type":"exact"},{"name":"NMe1Phe","type":"exact"}],"termid":"MOD:00074"}


id: MONDO:0001479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually mild form of diphtheria characterized by infection of the skin by corynebacterium diphtheria and the resulting formation of a chronic, shallow ulcer that is sometimes bordered or followed by a bulla.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma","termid":"MONDO:0002922"},{"relation_name":"is_a","term_name":"diphtheria","termid":"MONDO:0005504"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous diphtheria","secondary_identifiers":["MEDGEN:41599","NCIT:C34544","SCTID:18901009","DOID:12275","UMLS:C0012555","ICD10CM:A36.3","icd11.foundation:618920860","ICD9:032.85"],"synonyms":[{"name":"cutaneous diphtheria","type":"exact"}],"termid":"MONDO:0001479","xrefs":{"Monarch":{"xref_id":"0001479"}}}


id: GO:1990575
data:
  {"annotated_genes":["SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107064],"is_not":false,"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The process in which L-ornithine is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:9237680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"mitochondrial L-ornithine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000066"],"synonyms":[{"name":"mitochondrial ornithine transmembrane transport","type":"broad"},{"name":"mitochondrial ornithine transport","type":"related"}],"termid":"GO:1990575","terms_by_termid":{"GO:1990575":null}}


id: PBO:0074774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3G","termid":"PBO:0074774"}


id: GO:0051835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of synaptic structural plasticity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synapse structural plasticity","termid":"GO:0051823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synapse structural plasticity","synonyms":[{"name":"activation of synapse structural plasticity","type":"narrow"},{"name":"stimulation of synapse structural plasticity","type":"narrow"},{"name":"up regulation of synapse structural plasticity","type":"exact"},{"name":"up-regulation of synapse structural plasticity","type":"exact"},{"name":"upregulation of synapse structural plasticity","type":"exact"}],"termid":"GO:0051835"}


id: PBO:0041110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 3","termid":"PBO:0041110"}


id: PBO:0080175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 10","termid":"PBO:0080175"}


id: MONDO:0006203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the extrahepatic bile ducts. It is composed entirely by malignant squamous epithelial cells.","definition_xrefs":["NCIT:C5777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"},{"relation_name":"is_a","term_name":"squamous cell bile duct carcinoma","termid":"MONDO:0003500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct squamous cell carcinoma","secondary_identifiers":["EFO:1000248"],"synonyms":[{"name":"bile duct squamous cell carcinoma","type":"broad"},{"name":"extrahepatic bile duct squamous cell carcinoma","type":"exact"},{"name":"squamous cell bile duct carcinoma","type":"broad"},{"name":"squamous cell carcinoma of bile duct","type":"broad"},{"name":"squamous cell carcinoma of the bile duct","type":"broad"}],"termid":"MONDO:0006203","xrefs":{"Monarch":{"xref_id":"0006203"}}}


id: PBO:0070890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 22","termid":"PBO:0070890"}


id: PBO:0070942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 50","termid":"PBO:0070942"}


id: PBO:0087615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation and chromatin binding by the complex; required for tRNA genes clustering at the nucleolus; required for replication slow zone breakage following Mec1p inactivation; transcription is cell cycle regulated, peaking in mitosis and declining in G1; protein is constitutively degraded by the proteasome; rate limiting for condensin recruitment to chromatin","termid":"PBO:0087615"}


id: MONDO:0012298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele, diaphragmatic hernia, and radial ray defects","secondary_identifiers":["OMIM:609545","UMLS:C1836007","MEDGEN:332105","MESH:C563701"],"synonyms":[{"name":"Gershoni-Baruch syndrome","type":"related"},{"name":"omphalocele, diaphragmatic hernia, and radial ray defects","type":"exact"}],"termid":"MONDO:0012298","xrefs":{"Monarch":{"xref_id":"0012298"}}}


id: PBO:0086931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane; exocyst association is negatively regulated via phosphorylation by Cdc5p during cytokinesis","termid":"PBO:0086931"}


id: GO:0050798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a T cell population following activation by an antigenic stimulus.","definition_xrefs":["GOC:add","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated T cell proliferation","synonyms":[{"name":"activated T lymphocyte proliferation","type":"exact"},{"name":"activated T-cell proliferation","type":"exact"},{"name":"activated T-lymphocyte proliferation","type":"exact"},{"name":"proliferation of activated T cells","type":"exact"}],"termid":"GO:0050798"}


id: PBO:0048520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 3","termid":"PBO:0048520"}


id: MONDO:0012091
data:
  {"annotated_genes":["SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85845],"is_not":false,"summary":null,"term":"MONDO:0012091"}]},"cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that is characterized by prelingual onset with severe to profound, stable hearing loss and has material basis in variation in the chromosome region 1p22.1-p13.3.","definition_xrefs":["PMID:12634867","DOID:0110491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00082":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 32","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110466","GARD:22610","MEDGEN:373370","MESH:C563884","OMIM:608653","UMLS:C1837608"],"synonyms":[{"name":"CDC14A autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"DFNB105","type":"narrow"},{"name":"DFNB32","type":"narrow"},{"name":"autosomal recessive deafness 105","type":"narrow"},{"name":"autosomal recessive deafness 32","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 105","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 32","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in CDC14A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 105","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 32","type":"narrow"},{"name":"deafness, autosomal recessive 105","type":"narrow"},{"name":"deafness, autosomal recessive 32","type":"narrow"},{"name":"deafness, autosomal recessive 32, with or without immotile sperm","type":"narrow"},{"name":"deafness, autosomal recessive type 105","type":"narrow"}],"termid":"MONDO:0012091","terms_by_termid":{"MONDO:0012091":null},"xrefs":{"Monarch":{"xref_id":"0012091"}}}


id: PBO:0027412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027412"}


id: PBO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger-like protein Ini1","termid":"PBO:0001575"}


id: PR:Q9C0W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-2 complex subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02859","PANTHER:PTHR22780:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.03c","secondary_identifiers":["UniProtKB:Q9C0W7"],"synonyms":[{"name":"Spom972h-AP2A2","type":"exact"},{"name":"alpha-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 2 alpha large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large alpha chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0W7"}


id: PBO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses frp1","termid":"PBO:0000367"}


id: PBO:0054090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1443","termid":"PBO:0054090"}


id: MONDO:0018731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal multiple congenital anomalies/dysmorphic syndrome (obsolete MONDO:0018731)","secondary_identifiers":["Orphanet:459787"],"termid":"MONDO:0018731","xrefs":{"Monarch":{"xref_id":"0018731"}}}


id: MONDO:1012535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy and juvenile mortality, non-human animal","termid":"MONDO:1011651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and juvenile mortality, dog","secondary_identifiers":["OMIA:002256-9615"],"termid":"MONDO:1012535","xrefs":{"Monarch":{"xref_id":"1012535"}}}


id: GO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine.","definition_xrefs":["ISBN:0124020607","GOC:dph","GOC:mtg_kidney_jan10","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney development","secondary_identifiers":["Wikipedia:Kidney_development"],"synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0001822"}


id: PBO:0027602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_secondary_cell_septum_thickness","termid":"PBO:0027602"}


id: PBO:0040733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 corepressor pseudogene 1","termid":"PBO:0040733"}


id: PBO:0036247
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ4","termid":"PBO:0036247"}


id: PBO:0049232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 5","termid":"PBO:0049232"}


id: PBO:0013462
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses rad3delta or rad3-36 sensitivity to UV and hydroxyurea","termid":"PBO:0013462"}


id: MONDO:0003856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant hemangiopericytoma occurring in the adult population.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma, malignant","termid":"MONDO:0009330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult malignant hemangiopericytoma","secondary_identifiers":["DOID:6332","MEDGEN:83522","NCIT:C7946","UMLS:C0279547"],"synonyms":[{"name":"adult hemangiopericytoma, malignant","type":"exact"},{"name":"hemangiopericytoma, malignant of adults","type":"exact"},{"name":"malignant adult hemangiopericytoma","type":"exact"}],"termid":"MONDO:0003856","xrefs":{"Monarch":{"xref_id":"0003856"}}}


id: FYPO:0007294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetative cell is pear-shaped, and in which actin is localized only to the rounded end of the cell.","definition_xrefs":["PomBase:mah","PMID:10087262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pear-shaped vegetative cell","termid":"FYPO:0001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"pear-shaped vegetative cell with actin localized to rounded end","synonyms":[{"name":"pear-shaped cell with actin localized to rounded end during vegetative growth","type":"exact"},{"name":"pear-shaped vegetative cell with actin localized to rounded end during mitotic cell cycle","type":"related"},{"name":"pear-shaped vegetative cell with actin localized to rounded new end","type":"narrow"},{"name":"tadpole cell","type":"exact"}],"termid":"FYPO:0007294"}


id: PR:O14090
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.07c","synonyms":[{"name":"Spom972h-SPAC2F3.07c","type":"exact"}],"termid":"PR:O14090"}


id: MONDO:1012171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscle contracture and chondrodysplasia, non-human animal","termid":"MONDO:1011947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscle contracture and chondrodysplasia, cattle","secondary_identifiers":["OMIA:000675-9913"],"termid":"MONDO:1012171","xrefs":{"Monarch":{"xref_id":"1012171"}}}


id: MONDO:0010208
data:
  {"annotated_genes":["SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84830],"is_not":false,"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"A type of cutis laxa that is characterized by wrinkling of the skin of the dorsum of the hands and feet, an increased number of palmar and plantar creases, wrinkled abdominal skin, multiple skeletal abnormalities (joint laxity and congenital hip dislocation), late closing of the anterior fontanel, microcephaly, pre- and postnatal growth retardation, developmental delay and facial dysmorphism (a broad nasal bridge, downslanting palpebral fissures and hypertelorism).","definition_xrefs":["Orphanet:2834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 2A","termid":"MONDO:0018163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0004736","MONDO:0006025","MONDO:0005328","MONDO:0005497"],"is_obsolete":false,"name":"wrinkly skin syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:273","MEDGEN:98030","MESH:C536750","UMLS:C0406587","DOID:0112171","SCTID:238875009","icd11.foundation:638767040","ICD9:259.8","OMIM:278250"],"synonyms":[{"name":"WSS","type":"exact"},{"name":"wrinkled skin syndrome","type":"exact"},{"name":"wrinkly skin syndrome","type":"exact"}],"termid":"MONDO:0010208","terms_by_termid":{"MONDO:0010208":null},"xrefs":{"Monarch":{"xref_id":"0010208"}}}


id: MONDO:0022983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dieterich disease","secondary_identifiers":["UMLS:C2931124","GARD:204","MEDGEN:418997","MESH:C536172"],"synonyms":[{"name":"Dieterich disease","type":"exact"},{"name":"Dieterich's disease","type":"exact"},{"name":"avascular necrosis of the metacarpal head","type":"related"}],"termid":"MONDO:0022983","xrefs":{"Monarch":{"xref_id":"0022983"}}}


id: PBO:0058136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4435-2","termid":"PBO:0058136"}


id: PR:Q9UUK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tma23 gene.","definition_xrefs":["UniProtKB:Q9UUK4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1952.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.02","synonyms":[{"name":"Spom972h-tma23","type":"exact"}],"termid":"PR:Q9UUK4"}


id: PBO:0061107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family CARD domain containing 5","termid":"PBO:0061107"}


id: PBO:0090970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coproporphyrinogen III oxidase Hem13","termid":"PBO:0090970"}


id: PBO:0014247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator, zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0014247"}


id: MONDO:1010326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal degeneration that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal degeneration, non-human animal","secondary_identifiers":["OMIA:000866"],"termid":"MONDO:1010326","xrefs":{"Monarch":{"xref_id":"1010326"}}}


id: MONDO:1010598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoparathyroidism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism, non-human animal","termid":"MONDO:1010056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism, dog","secondary_identifiers":["OMIA:000528-9615"],"termid":"MONDO:1010598","xrefs":{"Monarch":{"xref_id":"1010598"}}}


id: GO:0007237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of Ssk2/Ssk22 proteins (obsolete GO:0007237)","synonyms":[{"name":"activation of Ssk2/Ssk22 proteins","type":"exact"}],"termid":"GO:0007237"}


id: GO:0015330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glutamine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"high-affinity glutamine transmembrane transporter activity","synonyms":[{"name":"high affinity glutamine permease activity","type":"related"},{"name":"high affinity glutamine transmembrane transporter activity","type":"exact"}],"termid":"GO:0015330"}


id: PBO:0007962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosyl phosphatase activator Ypa2","termid":"PBO:0007962"}


id: GO:0034084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of an acetyl group or groups from an acetylated sterol.","definition_xrefs":["PMID:18034159","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0019213","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"steryl deacetylase activity","synonyms":[{"name":"sterol deacetylase activity","type":"exact"},{"name":"steryl acetyl hydrolase activity","type":"exact"}],"termid":"GO:0034084"}


id: PBO:0074064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A39 pseudogene 2","termid":"PBO:0074064"}


id: PBO:0054735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2144","termid":"PBO:0054735"}


id: GO:0043040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in nonribosomal peptide synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"},{"relation_name":"is_a","term_name":"amino acid activation for nonribosomal peptide biosynthetic process","termid":"GO:0043041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA aminoacylation for nonribosomal peptide biosynthetic process","synonyms":[{"name":"tRNA aminoacylation for nonribosomal peptide anabolism","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide biosynthesis","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide formation","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide synthesis","type":"exact"}],"termid":"GO:0043040"}


id: MONDO:1012384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"forelimb-girdle muscular anomaly, non-human animal","termid":"MONDO:1011798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forelimb-girdle muscular anomaly, cattle","secondary_identifiers":["OMIA:001442-9913"],"termid":"MONDO:1012384","xrefs":{"Monarch":{"xref_id":"1012384"}}}


id: MONDO:0012084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aromatic L-amino acid decarboxylase deficiency is a very rare, severe, genetic neurometabolic disorder associated with clinical manifestations related to underproduction of serotonin and dopamine, mainly hypotonia, hypokinesia, ptosis oculogyric crises, and signs of autonomic dysfunction.","definition_xrefs":["Orphanet:35708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of catecholamine synthesis","termid":"MONDO:0017759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"aromatic L-amino acid decarboxylase deficiency","secondary_identifiers":["SCTID:237922009","ICD9:270.8","OMIM:608643","NANDO:1200988","MESH:C537437","UMLS:C1291564","GARD:770","MEDGEN:220945","DOID:0090123","NCIT:C142085","icd11.foundation:1134258245","NORD:2010","NANDO:2200596"],"synonyms":[{"name":"AADC deficiency","type":"exact"},{"name":"Aadc deficiency","type":"related"},{"name":"DDC deficiency","type":"related"},{"name":"Dopa decarboxylase deficiency","type":"related"},{"name":"aromatic L-amino acid decarboxylase deficiency","type":"exact"},{"name":"aromatic L-amino-acid decarboxylase deficiency","type":"exact"},{"name":"aromatic amino acid decarboxylase deficiency","type":"related"}],"termid":"MONDO:0012084","xrefs":{"Monarch":{"xref_id":"0012084"}}}


id: MONDO:0004889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"partial central choroid dystrophy","termid":"MONDO:0004890"},{"relation_name":"is_a","term_name":"central areolar choroidal dystrophy","termid":"MONDO:0008982"},{"relation_name":"is_a","term_name":"choroideremia","termid":"MONDO:0010557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"total central choroidal atrophy","secondary_identifiers":["ICD9:363.54","DOID:9820","MEDGEN:509706","UMLS:C0154898","SCTID:392049002"],"synonyms":[{"name":"central gyrate choroidal dystrophy","type":"related"},{"name":"choroidal dystrophy, serpiginous","type":"exact"},{"name":"helicoid choroid dystrophy","type":"related"},{"name":"total central choroid atrophy","type":"related"},{"name":"total central choroidal atrophy","type":"exact"},{"name":"total central dystrophy of choroid","type":"related"}],"termid":"MONDO:0004889","xrefs":{"Monarch":{"xref_id":"0004889"}}}


id: GO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm.","definition_xrefs":["PMID:15890982","PMID:12837608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"podosome","secondary_identifiers":["Wikipedia:Podosome"],"termid":"GO:0002102"}


id: PBO:0064796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1N (putative)","termid":"PBO:0064796"}


id: GO:0089718
data:
  {"annotated_genes":["SJAG_03591","SJAG_03970","SJAG_05346","SJAG_02605","SJAG_04637","SJAG_00991","SJAG_04718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[99547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[87302],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[98074,90941,109682,92527],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[92528,90942,98075],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[92529],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[99540,100399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"}]},"cv_name":"biological_process","definition":"The directed movement of an amino acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:krc","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"amino acid import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043092","GO:0044745","GO:1902837"],"synonyms":[{"name":"L-amino acid import","type":"broad"},{"name":"L-amino acid uptake","type":"narrow"},{"name":"amino acid import into cell","type":"exact"},{"name":"amino acid transmembrane import","type":"broad"}],"termid":"GO:0089718","terms_by_termid":{"GO:0097638":null,"GO:0097639":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null}}


id: PBO:0045717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 3 pseudogene 1","termid":"PBO:0045717"}


id: PBO:0058343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4716","termid":"PBO:0058343"}


id: PBO:0073413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 17","termid":"PBO:0073413"}


id: PBO:0059618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 30","termid":"PBO:0059618"}


id: CHEBI:16976
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hygromycin B","termid":"CHEBI:16976"}


id: GO:1905501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of a heteroreceptor complex into its constituent components.","definition_xrefs":["GOC:pad","GOC:PARL","GOC:TermGenie","PMID:24157794","GO_REF:0000079"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroreceptor complex disassembly (obsolete GO:1905501)","termid":"GO:1905501"}


id: GO:0060223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"},{"relation_name":"part_of","term_name":"retinal rod cell differentiation","termid":"GO:0060221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal rod cell fate commitment","termid":"GO:0060223"}


id: FYPO:0000635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize leucine, and therefore requires leucine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for leucine","synonyms":[{"name":"growth auxotrophic for leucine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for leucine during vegetative growth","type":"exact"},{"name":"leucine auxotrophy","type":"exact"}],"termid":"FYPO:0000635"}


id: PBO:0029622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029622"}


id: PBO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP4A22 antisense RNA 1","termid":"PBO:0044431"}


id: GO:0060286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell motility due to the motion of one or more flagella.","definition_xrefs":["GOC:dph","GOC:mlg","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellar cell motility (obsolete GO:0060286)","synonyms":[{"name":"flagellar cell motility","type":"exact"}],"termid":"GO:0060286"}


id: GO:0050839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cell adhesion molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"cell adhesion molecule binding","synonyms":[{"name":"CAM binding","type":"exact"},{"name":"adhesive extracellular matrix constituent","type":"related"},{"name":"cell adhesion molecule activity","type":"related"},{"name":"cell adhesion receptor activity","type":"related"}],"termid":"GO:0050839"}


id: MONDO:0011198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia characterized by moderate-to-severe metaphyseal changes, mild epiphyseal involvement, rhizomelic shortening of the lower limbs with bowing of the femora and/or tibiae, coxa vara, genu varum and pear-shaped vertebrae in childhood.","definition_xrefs":["Orphanet:93356"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Missouri type","secondary_identifiers":["MEDGEN:355563","OMIM:602111","GARD:10618","SCTID:719171005","UMLS:C1865832","icd11.foundation:1593289281","DOID:0080030"],"synonyms":[{"name":"Missouri type of spondyloepimetaphyseal dysplasia","type":"related"},{"name":"SEMD Missouri type","type":"related"},{"name":"SEMD type 2","type":"exact"},{"name":"SEMD, Missouri type","type":"exact"},{"name":"metaphyseal anadysplasia 1","type":"related"},{"name":"spondyloepimetaphyseal dysplasia Missouri type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia type 2","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, Missouri type","type":"exact"}],"termid":"MONDO:0011198","xrefs":{"Monarch":{"xref_id":"0011198"}}}


id: GO:0072244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular epithelium over time, from its formation to the mature structure. The metanephric glomerular epithelium is an epithelial tissue that covers the outer surfaces of the glomerulus in the metanephros. The metanephric glomerular epithelium consists of both parietal and visceral epithelium. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. A metanephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelium development","termid":"GO:0072010"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelium development","termid":"GO:0072244"}


id: GO:0198738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates the transfer of information from one cell to another, medaited by a wnt family protein ligand. This process includes wnt signal transduction in the receiving cell, release of wnt ligand from a secreting cell as well as any processes that actively facilitate wnt transport and presentation to receptor on the receiving cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling by wnt (obsolete GO:0198738)","termid":"GO:0198738"}


id: PBO:0056867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 3","termid":"PBO:0056867"}


id: GO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a nucleotide to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nucleotidylation","synonyms":[{"name":"protein amino acid nucleotidylation","type":"exact"}],"termid":"GO:0018175"}


id: GO:0009612
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mechanical stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chemi-mechanical coupling","type":"related"},{"name":"mechanical stimulus response","type":"exact"}],"termid":"GO:0009612","terms_by_termid":{"GO:0050982":null}}


id: GO:0052811
data:
  {"annotated_genes":["SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91045],"is_not":false,"summary":null,"term":"GO:0052811"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ADP + H+.","definition_xrefs":["PMID:9660759","PMID:9211928","PMID:9367159","RHEA:63688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01863":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 4-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1676145","MetaCyc:RXN-10957"],"synonyms":[{"name":"phosphatidylinositol 3-phosphate 4-kinase activity","type":"exact"}],"termid":"GO:0052811","terms_by_termid":{"GO:0052811":null}}


id: MONDO:0019563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CREST syndrome is a subtype of limited cutaneous systemic sclerosis (lcSSc) whose name is an acronym for the cardinal clinical features of the syndrome: calcinosis, Raynaud's phenomenon, esophageal dysmotility, sclerodactyly and telangiectasia.","definition_xrefs":["Orphanet:90290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"limited cutaneous systemic sclerosis","termid":"MONDO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"CREST syndrome","secondary_identifiers":["MedDRA:10011380","NCIT:C70646","MEDGEN:60083","DOID:0060218","UMLS:C0206138","NANDO:1201011","MESH:D017675","SCTID:31848007"],"synonyms":[{"name":"CRST syndrome","type":"narrow"},{"name":"CRST syndromes","type":"narrow"},{"name":"calcinosis - Raynaud phenomenon - esophageal involvement - sclerodactyly - telangiectasia","type":"related"},{"name":"calcinosis Raynaud phenomenon sclerodactyly telangiectasia","type":"related"},{"name":"calcinosis, Raynaud's phenomenon, esophageal dismobility, sclerodactyly, telangiectasia syndrome","type":"related"},{"name":"calcinosis-Raynaud phenomenon-esophageal involvement-sclerodactyly-telangiectasia syndrome","type":"exact"},{"name":"calcinosis-Raynaud phenomenon-sclerodactyly-telangiectasia","type":"related"},{"name":"lcSSc","type":"broad"},{"name":"limited cutaneous Systemic Scleroderma","type":"exact"},{"name":"limited cutaneous Systemic sclerosis","type":"exact"},{"name":"phenomenon-sclerodactyly-telangiectasia, calcinosis-Raynaud","type":"related"},{"name":"syndrome, CREST","type":"related"}],"termid":"MONDO:0019563","xrefs":{"Monarch":{"xref_id":"0019563"}}}


id: MOD:00771
data:
  {"annotated_genes":["SJAG_02763","SJAG_02592","SJAG_03012"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[118569,118686,118683,79827,118570,79828,118684,118685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 166.98-167.00 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 166.98-167.00 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:00771","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: GO:0070606
data:
  {"annotated_genes":["SJAG_00610","SJAG_02278","SJAG_04666","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102028,94134,88647,91628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-glucan biosynthetic process","termid":"GO:0032949"},{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan metabolic process","termid":"GO:0070605"},{"relation_name":"regulates","term_name":"(1->3)-alpha-glucan biosynthetic process","termid":"GO:0070596"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 1,3-alpha-glucan anabolism","type":"exact"},{"name":"regulation of 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"regulation of 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"regulation of 1,3-alpha-glucan formation","type":"exact"},{"name":"regulation of 1,3-alpha-glucan synthesis","type":"exact"},{"name":"regulation of alpha-1,3 glucan anabolism","type":"exact"},{"name":"regulation of alpha-1,3 glucan biosynthesis","type":"exact"},{"name":"regulation of alpha-1,3 glucan biosynthetic process","type":"exact"},{"name":"regulation of alpha-1,3 glucan formation","type":"exact"},{"name":"regulation of alpha-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0070606","terms_by_termid":{"GO:0070610":null}}


id: SO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCCCTC, bound by the PKA-responsive zinc finger transcription factor Rst2.","definition_xrefs":["PMID:11739717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STREP_motif","synonyms":[{"name":"STREP motif","type":"related"},{"name":"stress-starvation response element of Schizosaccharomyces pombe","type":"exact"}],"termid":"SO:0001859"}


id: GO:0102619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin A + NAD(P) = oryzalexin C + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin C synthase (oryzalexin A dependent) activity (obsolete GO:0102619)","termid":"GO:0102619"}


id: SO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A maxicircle is a replicon, part of a kinetoplast, that contains open reading frames and replicates via a rolling circle method.","definition_xrefs":["PMID:8395055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxicircle","secondary_identifiers":["SO:0000827"],"synonyms":[{"name":"maxicircle_chromosome","type":"exact"}],"termid":"SO:0000742"}


id: MONDO:0100368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy, which may include conditions described as retinitis pigmentosa and Leber congenital amaurosis, caused by biallelic variants in the RPE65 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"RPE65-related recessive retinopathy","synonyms":[{"name":"LCA2","type":"narrow"},{"name":"Leber congenital amaurosis 2","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in RPE65","type":"narrow"},{"name":"Leber congenital amaurosis type 2","type":"narrow"},{"name":"RP20","type":"narrow"},{"name":"RPE65 Leber congenital amaurosis","type":"narrow"},{"name":"RPE65 retinitis pigmentosa","type":"narrow"},{"name":"RPE65-related recessive retinopathy","type":"exact"},{"name":"amaurosis congenita of Leber 2","type":"narrow"},{"name":"amaurosis congenita of Leber II","type":"narrow"},{"name":"amaurosis congenita of Leber, type 2","type":"narrow"},{"name":"recessive RPE65 retinopathy","type":"exact"},{"name":"retinitis pigmentosa 20","type":"narrow"},{"name":"retinitis pigmentosa caused by mutation in RPE65","type":"narrow"}],"termid":"MONDO:0100368","xrefs":{"Monarch":{"xref_id":"0100368"}}}


id: MONDO:0003267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myxopapillary ependymoma (obsolete MONDO:0003267)","termid":"MONDO:0003267","xrefs":{"Monarch":{"xref_id":"0003267"}}}


id: GO:0048078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of eye pigmentation","termid":"GO:0048075"},{"relation_name":"is_a","term_name":"regulation of compound eye pigmentation","termid":"GO:0048076"},{"relation_name":"positively_regulates","term_name":"compound eye pigmentation","termid":"GO:0048072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye pigmentation","synonyms":[{"name":"activation of eye pigmentation","type":"broad"},{"name":"positive regulation of eye pigmentation","type":"broad"},{"name":"stimulation of eye pigmentation","type":"broad"},{"name":"up regulation of eye pigmentation","type":"broad"},{"name":"up-regulation of eye pigmentation","type":"broad"},{"name":"upregulation of eye pigmentation","type":"broad"}],"termid":"GO:0048078"}


id: PBO:0056068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member D","termid":"PBO:0056068"}


id: PBO:0087588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches","termid":"PBO:0087588"}


id: PR:Q9UTN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ath2 gene.","definition_xrefs":["UniProtKB:Q9UTN2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C139.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.01c","synonyms":[{"name":"Spom972h-ath2","type":"exact"}],"termid":"PR:Q9UTN2"}


id: PBO:0053383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 310","termid":"PBO:0053383"}


id: PBO:0056755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 8, methylcytidine","termid":"PBO:0056755"}


id: GO:0043207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to external biotic stimulus","termid":"GO:0043207"}


id: MONDO:0024666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of epithelial skin neoplasm without malignant characteristics.","definition_xrefs":["MONDO:patterns/benign"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"epithelial skin neoplasm","termid":"MONDO:0021634"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign epithelial skin neoplasm","secondary_identifiers":["UMLS:C0345981","NCIT:C7341","MEDGEN:83395"],"synonyms":[{"name":"benign epithelial skin neoplasm","type":"exact"},{"name":"benign epithelial skin tumor","type":"exact"},{"name":"benign epithelial skin tumour","type":"exact"},{"name":"benign skin epithelium neoplasm","type":"exact"},{"name":"benign skin epithelium tumor","type":"exact"},{"name":"benign skin epithelium tumour","type":"exact"},{"name":"epithelial skin neoplasm, benign","type":"exact"}],"termid":"MONDO:0024666","xrefs":{"Monarch":{"xref_id":"0024666"}}}


id: FYPO:0006800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is decreased during interphase of the mitotic cell cycle. Centromere-kinetochore complexes normally cluster near the old spindle pole body during mitotic interphase.","definition_xrefs":["PMID:29180432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal centromere clustering at nuclear periphery","termid":"FYPO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased centromere clustering at nuclear periphery during mitotic interphase","synonyms":[{"name":"centromere declustering during mitotic interphase","type":"exact"},{"name":"decreased centromere clustering at SPB during mitotic interphase","type":"related"},{"name":"decreased centromere clustering at nuclear periphery during interphase during vegetative growth","type":"exact"},{"name":"decreased centromere clustering at nuclear periphery during interphase of mitotic cell cycle","type":"related"},{"name":"decreased centromere clustering at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased centromere-SPB clustering during mitotic interphase","type":"related"},{"name":"decreased inter-centromere connection during mitotic interphase","type":"exact"},{"name":"decreased kinetochore clustering at SPB during mitotic interphase","type":"related"},{"name":"decreased kinetochore clustering at old mitotic spindle pole body during mitotic interphase","type":"related"},{"name":"decreased kinetochore clustering at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased kinetochore localization at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased mitotic centromere clustering at nuclear periphery during mitotic interphase","type":"exact"}],"termid":"FYPO:0006800"}


id: PBO:0060253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 3","termid":"PBO:0060253"}


id: MONDO:0006025
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id: PBO:0014610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulphate transmembrane transporter (predicted)","termid":"PBO:0014610"}


id: GO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte differentiation","termid":"GO:0002062"}


id: FYPO:0001117
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is lower than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["FYPO:0002935"],"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased RNA accumulation during vegetative growth","type":"related"},{"name":"decreased RNA level during mitotic cell cycle","type":"related"},{"name":"decreased cellular RNA level during vegetative growth","type":"exact"},{"name":"decreased cellular mRNA level during vegetative growth","type":"narrow"},{"name":"decreased mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased mRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mRNA level during vegetative growth","type":"narrow"},{"name":"decreased mRNA transcript level during vegetative growth","type":"narrow"},{"name":"decreased messenger RNA level during vegetative growth","type":"narrow"},{"name":"decreased transcript level during vegetative growth","type":"exact"},{"name":"reduced RNA level during vegetative growth","type":"exact"},{"name":"reduced mRNA level during vegetative growth","type":"narrow"}],"termid":"FYPO:0001117","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:1901491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:20133819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of lymphangiogenesis","termid":"GO:1901490"},{"relation_name":"negatively_regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphangiogenesis","synonyms":[{"name":"down regulation of lymph vessel formation","type":"exact"},{"name":"down regulation of lymphangiogenesis","type":"exact"},{"name":"down-regulation of lymph vessel formation","type":"exact"},{"name":"down-regulation of lymphangiogenesis","type":"exact"},{"name":"downregulation of lymph vessel formation","type":"exact"},{"name":"downregulation of lymphangiogenesis","type":"exact"},{"name":"inhibition of lymph vessel formation","type":"narrow"},{"name":"inhibition of lymphangiogenesis","type":"narrow"},{"name":"negative regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901491"}


id: PR:Q9UUJ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.14c","synonyms":[{"name":"Spom972h-mrpl25","type":"exact"}],"termid":"PR:Q9UUJ5"}


id: GO:0006280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which genetic material undergoes a detectable and heritable structural change. There are three categories of mutation: genome mutations, involving addition or subtraction of one or more whole chromosomes; chromosome mutations, which alter the structure of chromosomes; and gene mutations, where the structure of a gene is altered at the molecular level.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete mutagenesis (obsolete GO:0006280)","synonyms":[{"name":"mutagenesis","type":"exact"}],"termid":"GO:0006280"}


id: MONDO:0006019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endemic, infectious, nonvenereal disease in humans that presents mainly in children younger than 15 years. The disease occurs primarily in warm, humid, tropical areas of Africa, Asia, South America, and Oceania, among poor rural populations where conditions of overcrowding and poor sanitation prevail. Infection with Treponema pertenue, a subspecies of Treponema pallidum, causes the disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yaws","secondary_identifiers":["ICD9:102","MESH:D015001","NCIT:C41353","ICD10CM:A66","NORD:1872","ICD9:102.9","SCTID:70647001","MEDGEN:12186","DOID:10371","GARD:7913","ICD9:102.7","UMLS:C0043388","icd11.foundation:840525023"],"synonyms":[{"name":"Bouba","type":"exact"},{"name":"Treponema pallidum subsp. pertenue caused disease or disorder","type":"exact"},{"name":"Treponema pallidum subsp. pertenue disease or disorder","type":"exact"},{"name":"Treponema pallidum subsp. pertenue infectious disease","type":"exact"},{"name":"Treponema pertenue infection","type":"related"},{"name":"endemic treponematoses","type":"related"},{"name":"frambesia","type":"exact"},{"name":"frambesia tropica","type":"exact"},{"name":"frambosie","type":"exact"},{"name":"polypapilloma tropicum","type":"exact"},{"name":"thymosis","type":"exact"}],"termid":"MONDO:0006019","xrefs":{"Monarch":{"xref_id":"0006019"}}}


id: PBO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H70 (predicted)","termid":"PBO:0002578"}


id: MONDO:0005736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eastern equine encephalitis (EEE) is an acute arboviral infection caused by an alphavirus of the Togaviridae family transmitted by an infected mosquito, that is characterized by the onset of flulike symptoms including fever, chills, weakness, headache, vomiting, abdominal pain with diarrhea, myalgia, leucocytosis, and hematuria, rapidly progressing to diffuse central nervous system (CNS) involvement with confusion, somnolence, or even coma. Seizures, which may progress to status epilepticus and neurologic sequelae, cranial nerve palsies, and photophobia may occur. EEE is associated with a high rate of morbidity and mortality.","definition_xrefs":["Orphanet:83594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eastern equine encephalitis","secondary_identifiers":["DOID:10841","GARD:10821","MedDRA:10014587","EFO:0007242","MEDGEN:102258","ICD10CM:A83.2","ICD9:062.2","MESH:D020242","icd11.foundation:682536148","UMLS:C0153065"],"synonyms":[{"name":"EEE","type":"related"},{"name":"Eastern equine encephalomyelitis","type":"exact"},{"name":"Neuroinvasive Eastern equine encephalitis virus infection","type":"exact"}],"termid":"MONDO:0005736","xrefs":{"Monarch":{"xref_id":"0005736"}}}


id: PBO:0056832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT2 pseudogene 1","termid":"PBO:0056832"}


id: PBO:0063867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class A","termid":"PBO:0063867"}


id: GO:0021839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which migrating interneurons interact with an external substratum as a component of migration from the subpallium to the cortex.","definition_xrefs":["GOC:dgh","PMID:12626695","GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"interneuron migration from the subpallium to the cortex","termid":"GO:0021830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"interneuron-substratum interaction involved in interneuron migration from the subpallium to the cortex","termid":"GO:0021839"}


id: PBO:0078568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51B, pseudogene","termid":"PBO:0078568"}


id: GO:0090295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:mah","GOC:rb","PMID:19104072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"catabolite repression","termid":"GO:0061984"},{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription","termid":"GO:0090293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"nitrogen catabolite repression of transcription","synonyms":[{"name":"negative regulation of transcription by nitrogen catabolites","type":"exact"},{"name":"nitrogen catabolite repression","type":"exact"}],"termid":"GO:0090295"}


id: GO:0006278
data:
  {"annotated_genes":["SJAG_03855","SJAG_02194","SJAG_04586","SJAG_01677","SJAG_03685","SJAG_00939","SJAG_05979","SJAG_04266","SJAG_01378"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94284],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[115081,107092,110697,89848,98917,88381,107274,112957,89847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"}]},"cv_name":"biological_process","definition":"A DNA biosynthetic process that uses RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strand.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_03685":null,"SJAG_03855":null,"SJAG_04266":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"RNA-templated DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA-dependent DNA biosynthetic process","type":"exact"}],"termid":"GO:0006278","terms_by_termid":{"GO:0007004":null,"GO:0032210":null}}


id: PBO:0040482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 3","termid":"PBO:0040482"}


id: GO:0008997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction, leaving an undigested core of 3-5 nucleotides.","definition_xrefs":["PMID:11948193"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonuclease R activity (obsolete GO:0008997)","termid":"GO:0008997"}


id: PBO:0036495
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose metabolism cluster","termid":"PBO:0036495"}


id: PBO:0068938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 181, pseudogene","termid":"PBO:0068938"}


id: GO:1904025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose catabolic process to lactate via pyruvate.","definition_xrefs":["PMID:20935145","GO_REF:0000058","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"regulation of glucose catabolic process to lactate via pyruvate","termid":"GO:1904023"},{"relation_name":"positively_regulates","term_name":"glucose catabolic process to lactate via pyruvate","termid":"GO:0019661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"positive regulation of glucose catabolic process to lactate via pyruvate","synonyms":[{"name":"activation of glucose catabolic process to lactate via pyruvate","type":"narrow"},{"name":"activation of glucose fermentation to lactate via pyruvate","type":"narrow"},{"name":"activation of homofermentation","type":"narrow"},{"name":"activation of homofermentative lactate fermentation","type":"narrow"},{"name":"activation of homofermentative pathway","type":"narrow"},{"name":"activation of homolactate fermentation","type":"narrow"},{"name":"activation of homolactic fermentation","type":"narrow"},{"name":"positive regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"positive regulation of homofermentation","type":"exact"},{"name":"positive regulation of homofermentative lactate fermentation","type":"exact"},{"name":"positive regulation of homofermentative pathway","type":"exact"},{"name":"positive regulation of homolactate fermentation","type":"exact"},{"name":"positive regulation of homolactic fermentation","type":"exact"},{"name":"up regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"up regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"up regulation of homofermentation","type":"exact"},{"name":"up regulation of homofermentative lactate fermentation","type":"exact"},{"name":"up regulation of homofermentative pathway","type":"exact"},{"name":"up regulation of homolactate fermentation","type":"exact"},{"name":"up regulation of homolactic fermentation","type":"exact"},{"name":"up-regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"up-regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"up-regulation of homofermentation","type":"exact"},{"name":"up-regulation of homofermentative lactate fermentation","type":"exact"},{"name":"up-regulation of homofermentative pathway","type":"exact"},{"name":"up-regulation of homolactate fermentation","type":"exact"},{"name":"up-regulation of homolactic fermentation","type":"exact"},{"name":"upregulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"upregulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"upregulation of homofermentation","type":"exact"},{"name":"upregulation of homofermentative lactate fermentation","type":"exact"},{"name":"upregulation of homofermentative pathway","type":"exact"},{"name":"upregulation of homolactate fermentation","type":"exact"},{"name":"upregulation of homolactic fermentation","type":"exact"}],"termid":"GO:1904025"}


id: PBO:0078747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 10B","termid":"PBO:0078747"}


id: PBO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENV10 family protein (predicted)","termid":"PBO:0000868"}


id: MONDO:0014905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"encephalopathy due to mitochondrial and peroxisomal fission defect","termid":"MONDO:0054865"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0019053"],"is_obsolete":false,"name":"encephalopathy due to defective mitochondrial and peroxisomal fission 2","secondary_identifiers":["Orphanet:485421","OMIM:617086","MEDGEN:934693","GARD:17881","UMLS:C4310726"],"synonyms":[{"name":"EMPF2","type":"exact"},{"name":"Leigh-like basal ganglia disease-optic atrophy-peripheral neuropathy syndrome","type":"exact"},{"name":"MFF-associated encephalopathy due to peroxisomal and mitochondrial fission defect","type":"exact"},{"name":"encephalopathy due to defective mitochondrial and peroxisomal fission 2","type":"exact"},{"name":"encephalopathy due to defective mitochondrial and peroxisomal fission type 2","type":"exact"}],"termid":"MONDO:0014905","xrefs":{"Monarch":{"xref_id":"0014905"}}}


id: PATO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation quality inhering in bearer by virtue of the bearer's exhibiting or being caused by radioactivity.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activity (of a radionuclide)","termid":"PATO:0001740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radioactive","termid":"PATO:0001741"}


id: GO:0010371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"regulation of gibberellin biosynthetic process","synonyms":[{"name":"regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010371"}


id: GO:0019509
data:
  {"annotated_genes":["SJAG_02689","SJAG_02293","SJAG_03614","SJAG_00309","SJAG_01404","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88982,91859,98211,99842,106165,111565],"is_not":false,"summary":null,"term":"GO:0019509"}]},"cv_name":"biological_process","definition":"The generation of L-methionine (2-amino-4-(methylthio)butanoic acid) from methylthioadenosine.","definition_xrefs":["GOC:jl","MetaCyc:PWY-4361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_01404":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_03614":null,"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"L-methionine salvage from methylthioadenosine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"methionine recycling","type":"narrow"},{"name":"methionine regeneration","type":"narrow"},{"name":"methionine salvage from methylthioadenosine","type":"exact"},{"name":"methionine salvage pathway","type":"exact"}],"termid":"GO:0019509","terms_by_termid":{"GO:0019509":null}}


id: GO:1900690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gliotoxin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of gliotoxin biosynthetic process","termid":"GO:1900689"},{"relation_name":"negatively_regulates","term_name":"gliotoxin biosynthetic process","termid":"GO:2001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gliotoxin biosynthetic process","synonyms":[{"name":"down regulation of gliotoxin anabolism","type":"exact"},{"name":"down regulation of gliotoxin biosynthesis","type":"exact"},{"name":"down regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"down regulation of gliotoxin formation","type":"exact"},{"name":"down regulation of gliotoxin synthesis","type":"exact"},{"name":"down-regulation of gliotoxin anabolism","type":"exact"},{"name":"down-regulation of gliotoxin biosynthesis","type":"exact"},{"name":"down-regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"down-regulation of gliotoxin formation","type":"exact"},{"name":"down-regulation of gliotoxin synthesis","type":"exact"},{"name":"downregulation of gliotoxin anabolism","type":"exact"},{"name":"downregulation of gliotoxin biosynthesis","type":"exact"},{"name":"downregulation of gliotoxin biosynthetic process","type":"exact"},{"name":"downregulation of gliotoxin formation","type":"exact"},{"name":"downregulation of gliotoxin synthesis","type":"exact"},{"name":"inhibition of gliotoxin anabolism","type":"exact"},{"name":"inhibition of gliotoxin biosynthesis","type":"exact"},{"name":"inhibition of gliotoxin biosynthetic process","type":"narrow"},{"name":"inhibition of gliotoxin formation","type":"exact"},{"name":"inhibition of gliotoxin synthesis","type":"exact"},{"name":"negative regulation of gliotoxin anabolism","type":"exact"},{"name":"negative regulation of gliotoxin biosynthesis","type":"exact"},{"name":"negative regulation of gliotoxin formation","type":"exact"},{"name":"negative regulation of gliotoxin synthesis","type":"exact"}],"termid":"GO:1900690"}


id: MONDO:0018128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phalangeal microgeodic syndrome is a rare primary osteolysis characterized by multiple small osteolytic areas and sclerosis in the phalanges of one or both hands associated with swelling and redness of the phalanges. Condition is benign, self-limited and may be associated with cold exposure.","definition_xrefs":["Orphanet:352636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phalangeal microgeodic syndrome","secondary_identifiers":["UMLS:C4749465","MEDGEN:1658987","GARD:21524"],"synonyms":[{"name":"phalangeal osteolysis","type":"exact"}],"termid":"MONDO:0018128","xrefs":{"Monarch":{"xref_id":"0018128"}}}


id: GO:0031371
data:
  {"annotated_genes":["SJAG_02319","SJAG_03006","SJAG_02918","SJAG_00293","SJAG_00320"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115917],"is_not":false,"summary":null,"term":"GO:0031371"},{"annotations":[92584,117964,115343,90438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033503"}]},"cv_name":"cellular_component","definition":"Any complex that possesses ubiquitin conjugating enzyme activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_02319":null,"SJAG_02918":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ubiquitin conjugating enzyme complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"E2 complex","type":"related"}],"termid":"GO:0031371","terms_by_termid":{"GO:0031371":null,"GO:0033503":null}}


id: GO:0060615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a bud forms from the mammary placode. A mammary bud is bulb of epithelial cells that is distinct from the surrounding epidermis.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"mammary gland bud morphogenesis","termid":"GO:0060648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland bud formation","termid":"GO:0060615"}


id: SO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non coding RNA transcript, complementary to subtelomeric tract of TERRA transcript but devoid of the repeats.","definition_xrefs":["PMID:2139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric_transcript","termid":"SO:0001927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARRET","termid":"SO:0001924"}


id: PBO:0067190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 252, pseudogene","termid":"PBO:0067190"}


id: PBO:0045602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 13 (pseudogene)","termid":"PBO:0045602"}


id: GO:0009093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cysteine, 2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"cysteine catabolic process","secondary_identifiers":["Wikipedia:Cysteine"],"synonyms":[{"name":"cysteine breakdown","type":"exact"},{"name":"cysteine catabolism","type":"exact"},{"name":"cysteine degradation","type":"exact"}],"termid":"GO:0009093"}


id: GO:0036351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of ubiquitin group at lysine 13 (H2A-K13) in metazoans, and at the equivalent residue in other organisms. Monoubiquitin is first attached to H2A-K13 and K63-linked ubiquitin chains are then extended from this monoubiquitin.","definition_xrefs":["GOC:sp","PMID:22713238","PMID:22980979"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K13 ubiquitination (obsolete GO:0036351)","synonyms":[{"name":"histone H2A ubiquitination (H2A-K13)","type":"exact"}],"termid":"GO:0036351"}


id: PR:Q09726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase synthesis protein 25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.06","synonyms":[{"name":"Spom972h-atp25","type":"exact"}],"termid":"PR:Q09726"}


id: PBO:0051889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITFG2 antisense RNA 1","termid":"PBO:0051889"}


id: FYPO:0005095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to chromatin at replication origin","synonyms":[{"name":"abolished protein localisation to chromatin at replication origin during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at replication origin during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at replication origin during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005095"}


id: MONDO:1010813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, horse","secondary_identifiers":["OMIA:000810-9796"],"termid":"MONDO:1010813","xrefs":{"Monarch":{"xref_id":"1010813"}}}


id: GO:0051801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The killing by an organism of a cell in a second organism by means of the rupture of cell membranes and the loss of cytoplasm, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051801)","synonyms":[{"name":"cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0051801"}


id: MONDO:0100371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A new infection by the hepatitis C virus, which can be detected in blood. Signs and symptoms may include right upper quadrant abdominal pain, jaundice, dark urine, white stools and nausea. Approximately 15%-25% individuals clear the virus from their bodies without treatment. 75%-85% individuals develop chronic hepatitis C. There are possible treatments depending on individual characteristics.","definition_xrefs":["NCIT:C157782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis C virus infection","termid":"MONDO:0005231"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"acute hepatitis C virus infection","synonyms":[{"name":"acute hepatitis C","type":"exact"}],"termid":"MONDO:0100371","xrefs":{"Monarch":{"xref_id":"0100371"}}}


id: PBO:0089702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoside Hydrolase family protein Gls1","termid":"PBO:0089702"}


id: GO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic host cells are homogenized and that sediment on centrifugation at 100000 g.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete host cell microsome (obsolete GO:0044189)","synonyms":[{"name":"host cell microsomal membrane","type":"exact"},{"name":"host cell microsome","type":"exact"}],"termid":"GO:0044189"}


id: PBO:0047330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box DNA helicase 1","termid":"PBO:0047330"}


id: MONDO:0700036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal tumor characterized by mixed features of both fibroma and thecoma.","direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrothecoma","secondary_identifiers":["MEDGEN:1668953","UMLS:C4721918"],"termid":"MONDO:0700036","xrefs":{"Monarch":{"xref_id":"0700036"}}}


id: PBO:0049631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 34","termid":"PBO:0049631"}


id: GO:0048028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a simple or complex galacturonan. Galacturonan is any glycan composed solely of galacturonic acid residues, a specific type of glycuronan, and a constituent of some pectins.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"galacturonan binding","synonyms":[{"name":"polygalacturonide binding","type":"related"}],"termid":"GO:0048028"}


id: GO:0102785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: violaxanthin + 2 O2 = 2 5,6-epoxy-3-hydroxy-9-apo-beta-caroten-9-one + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["PMID:11316814","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"violaxanthin oxygenase activity","secondary_identifiers":["MetaCyc:RXN-7886"],"termid":"GO:0102785"}


id: PBO:0079225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 3 pseudogene 1","termid":"PBO:0079225"}


id: GO:2001079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-D-Glc.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-D-Glc binding","termid":"GO:2001079"}


id: GO:0044214
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of gene products and protein complexes that have some part that spans both leaflets of the membrane.","definition_xrefs":["GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete spanning component of plasma membrane (obsolete GO:0044214)","synonyms":[{"name":"fully spanning plasma membrane","type":"exact"},{"name":"transmembrane","type":"related"}],"termid":"GO:0044214"}


id: GO:0032102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to external stimulus","synonyms":[{"name":"down regulation of response to external stimulus","type":"exact"},{"name":"down-regulation of response to external stimulus","type":"exact"},{"name":"downregulation of response to external stimulus","type":"exact"},{"name":"inhibition of response to external stimulus","type":"narrow"}],"termid":"GO:0032102"}


id: GO:0009553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo sac over time, from its formation to the mature structure. The process begins with the meiosis of the megasporocyte to form four haploid megaspores. Three of the megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center. The two polar nuclei fuse resulting in a mononucleate diploid endosperm mother cell. The three antipodal cells degenerate.","definition_xrefs":["GOC:tb","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gametophyte development","termid":"GO:0048229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac development","secondary_identifiers":["GO:0048230"],"synonyms":[{"name":"female gametophyte development","type":"exact"}],"termid":"GO:0009553"}


id: PATO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000658 metamphetamine value (obsolete PATO:0000658)","termid":"PATO:0000658"}


id: PR:Q09806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2G11.04 gene.","definition_xrefs":["UniProtKB:Q09806","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2G11.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.04","synonyms":[{"name":"Spom972h-SPAC2G11.04","type":"exact"}],"termid":"PR:Q09806"}


id: GO:0005031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor activity","termid":"GO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"tumor necrosis factor receptor activity","secondary_identifiers":["GO:0005032","GO:0005033"],"synonyms":[{"name":"NGF/TNF (6 C-domain) receptor activity","type":"narrow"},{"name":"TNF receptor activity","type":"exact"},{"name":"TNF receptor activity, type I","type":"narrow"},{"name":"TNF receptor activity, type II","type":"narrow"},{"name":"tumor necrosis factor receptor activity, type I","type":"narrow"},{"name":"tumor necrosis factor receptor activity, type II","type":"narrow"},{"name":"tumor necrosis factor-activated receptor activity","type":"exact"}],"termid":"GO:0005031"}


id: GO:0097472
data:
  {"annotated_genes":["SJAG_00150","SJAG_00342","SJAG_03421","SJAG_01000","SJAG_01825","SJAG_03048","SJAG_03967","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101580,105206],"is_not":false,"summary":null,"term":"GO:0097472"},{"annotations":[95004,108188,93540,104856,91343,101581,105207,108189,114476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004693"}]},"cv_name":"molecular_function","definition":"Cyclin-dependent catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01000":null,"SJAG_01825":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0016740","GO:0016301","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097472","terms_by_termid":{"GO:0004693":null,"GO:0097472":null}}


id: FYPO:0009091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine and proline as  nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0005447","FYPO:0001985","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on lysine and proline nitrogen source","synonyms":[{"name":"decreased vegetative cell growth on lysine and proline nitrogen source","type":"exact"}],"termid":"FYPO:0009091"}


id: GO:0009250
data:
  {"annotated_genes":["SJAG_03123","SJAG_04668","SJAG_04666","SJAG_02446","SJAG_01288","SJAG_01028","SJAG_01376","SJAG_04771","SJAG_00424","SJAG_01787","SJAG_00610","SJAG_03057","SJAG_01835","SJAG_04462","SJAG_01453","SJAG_02278","SJAG_00218","SJAG_04509","SJAG_01255","SJAG_02222","SJAG_05285","SJAG_04659","SJAG_01290","SJAG_02916","SJAG_00876","SJAG_04073","SJAG_02590","SJAG_04483","SJAG_04236","SJAG_04184","SJAG_01209","SJAG_00963","SJAG_03705","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89804,101637,93415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[113511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[93662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[108451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[90799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051274"},{"annotations":[108225,113512,116918,88353,103347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[112296,90800,106933,105262,108453,114953,90789,87281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[101824,107765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[108051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[90140,78126],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[91618],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[86733,91622],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[87108],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[89978,91606,102026,117159,105076,117035,91624,104506],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[102028,91628,94134,88647],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01209":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glucan anabolism","type":"exact"},{"name":"glucan biosynthesis","type":"exact"},{"name":"glucan formation","type":"exact"},{"name":"glucan synthesis","type":"exact"}],"termid":"GO:0009250","terms_by_termid":{"GO:0005978":null,"GO:0006078":null,"GO:0030979":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051274":null,"GO:0060635":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: MONDO:0018020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mercury poisoning is caused mainly through ingestion or inhalation of any of the 3 forms of mercury, elemental, organic, and inorganic. Exposure to elemental mercury affects the pulmonary (inhalation of mercury vapors causes coughing, chills, fever, shortness of breath), dermatological (mild swelling, vesiculation, scaling, irritation, urticaria, erythema and allergic contact dermatitis accompanied by pain), and peripheral and central nervous (CNS) systems (depression, paranoia, extreme irritability, hallucinations, inability to concentrate, memory loss, hands, head, lips, tongue, jaw and eyelids tremors, weight loss, perpetually low body temperature, drowsiness, headaches, insomnia, fatigue). Exposure to inorganic mercury generally causes development of a metallic taste, local oropharyngeal pain, nausea, vomiting, bloody diarrhea, colic abdominal pain, renal dysfunction and, neurologic abnormalities; while that to organic mercury can lead to delayed neurotoxicity.","definition_xrefs":["Orphanet:330021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury poisoning","secondary_identifiers":["GARD:7021","EFO:1001810","SCTID:85180002","ICD9:985.0","MESH:D008630"],"synonyms":[{"name":"Mercury intoxication","type":"exact"},{"name":"Mercury toxicity","type":"related"},{"name":"hydrargyria","type":"exact"},{"name":"mercurialism","type":"exact"}],"termid":"MONDO:0018020","xrefs":{"Monarch":{"xref_id":"0018020"}}}


id: PBO:0088172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylitol dehydrogenase; converts xylitol to D-xylulose; expression induced by xylose, even though this pentose sugar is not well utilized by S. cerevisiae; null mutant has cell wall defect","termid":"PBO:0088172"}


id: MONDO:0100060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital/infantile spindle cell rhabdomyosarcoma characterized by the presence of gene fusions involving the VGLL2, SRF, TEAD1, NCOA2, and CITED2 genes.","definition_xrefs":["NCIT:C178232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell rhabdomyosarcoma","termid":"MONDO:0002581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"congenital/infantile spindle cell rhabdomyosarcoma with VGLL2/NCOA2/CITED2 rearrangements","secondary_identifiers":["MEDGEN:1791325","UMLS:C5554884"],"termid":"MONDO:0100060","xrefs":{"Monarch":{"xref_id":"0100060"}}}


id: PBO:0075892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5","termid":"PBO:0075892"}


id: PBO:0062076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 7 pseudogene","termid":"PBO:0062076"}


id: GO:2000530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of insulin secretion involved in cellular response to glucose stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of regulation of insulin secretion involved in cellular response to glucose stimulus (obsolete GO:2000530)","synonyms":[{"name":"positive regulation of regulation of insulin secretion in response to glucose","type":"exact"},{"name":"positive regulation of regulation of insulin secretion involved in cellular response to glucose stimulus","type":"exact"}],"termid":"GO:2000530"}


id: GO:1990723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasm situated in close proximity to a nuclear pore complex.","definition_xrefs":["PMID:9398662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic periphery of the nuclear pore complex","synonyms":[{"name":"associated with the nuclear pore","type":"related"}],"termid":"GO:1990723"}


id: PBO:0075655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splA/ryanodine receptor domain and SOCS box containing 4","termid":"PBO:0075655"}


id: PR:O94462
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein puf3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.22c","synonyms":[{"name":"Spom972h-puf3","type":"exact"},{"name":"pumilio homology domain family member 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94462"}


id: GO:0010154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fruit over time, from its formation to the mature structure. The fruit is a reproductive body of a seed plant.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit development","termid":"GO:0010154"}


id: GO:0061627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-L-methionine + L-homocysteine = 2 L-methionine + H+.","definition_xrefs":["RHEA:26337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"S-methylmethionine-homocysteine S-methyltransferase activity","secondary_identifiers":["MetaCyc:MMUM-RXN","Reactome:R-HSA-5696838"],"synonyms":[{"name":"S-methylmethionine homocysteine transmethylase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"},{"name":"methylmethionine:homocysteine methyltransferase activity","type":"related"}],"termid":"GO:0061627"}


id: GO:1902864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic camera-type eye development.","definition_xrefs":["GOC:TermGenie","PMID:16872597","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of embryonic camera-type eye development","termid":"GO:1902863"},{"relation_name":"negatively_regulates","term_name":"embryonic camera-type eye development","termid":"GO:0031076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic camera-type eye development","synonyms":[{"name":"down regulation of embryonic camera-type eye development","type":"exact"},{"name":"down regulation of embryonic eye development","type":"exact"},{"name":"down-regulation of embryonic camera-type eye development","type":"exact"},{"name":"down-regulation of embryonic eye development","type":"exact"},{"name":"downregulation of embryonic camera-type eye development","type":"exact"},{"name":"downregulation of embryonic eye development","type":"exact"},{"name":"inhibition of embryonic camera-type eye development","type":"narrow"},{"name":"inhibition of embryonic eye development","type":"narrow"},{"name":"negative regulation of embryonic eye development","type":"exact"}],"termid":"GO:1902864"}


id: GO:0018228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-S-geranylgeranylcysteine; formation of S-geranylgeranyl-L-cysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CAAX motif and methyl esterification of the geranylgeranylated cysteine; methyl esterification but not cleavage occurs for the CXC motif. For the type II geranylgeranyltransferase the residue may be found at the first and final positions in the sequence motif C-X-C* or at the final position in the sequence motif C-C*. These motifs are necessary but not sufficient for modification.","definition_xrefs":["RESID:AA0104"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-S-geranylgeranyl-L-cysteine biosynthetic process from peptidyl-cysteine (obsolete GO:0018228)","synonyms":[{"name":"peptidyl-S-geranylgeranyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-geranylgeranyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-geranylgeranyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018228"}


id: GO:0048180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta subunits, inhibin beta-A and inhibin beta-B (sometimes known as activin beta or activin/inhibin beta). There are three forms of activin complex, activin A, which is composed of 2 inhibin beta-A subunits, activin B, which is composed of 2 inhibin beta-B subunits, and activin AB, which is composed of an inhibin beta-A and an inhibin beta-B subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"activin complex","termid":"GO:0048180"}


id: GO:1901563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a camptothecin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to camptothecin","synonyms":[{"name":"response to CPT","type":"exact"}],"termid":"GO:1901563"}


id: PBO:0045224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C12","termid":"PBO:0045224"}


id: PBO:0064112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1 like 2 (gene/pseudogene)","termid":"PBO:0064112"}


id: PBO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 3' to 5' DNA helicase (predicted)","termid":"PBO:0001347"}


id: PBO:0078699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 1-2","termid":"PBO:0078699"}


id: GO:1902814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:TermGenie","GOC:mr","GO_REF:0000058","PMID:10499580"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1902814)","synonyms":[{"name":"activation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"activation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"narrow"},{"name":"activation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"positive regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"positive regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"up regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"up-regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"upregulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1902814"}


id: PBO:0061920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily E member 3 (gene/pseudogene)","termid":"PBO:0061920"}


id: MONDO:0015984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic immune system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic immune disease (obsolete MONDO:0015984)","secondary_identifiers":["Orphanet:183770"],"synonyms":[{"name":"rare genetic immune system disease","type":"exact"}],"termid":"MONDO:0015984","xrefs":{"Monarch":{"xref_id":"0015984"}}}


id: RO:0002177
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a is attached to part of b if a is attached to b, or a is attached to some p, where p is part of b.","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"},{"relation_name":"is_a","term_name":"biomechanically_related_to","termid":"RO:0002567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attached_to_part_of","termid":"RO:0002177"}


id: FYPO:0004276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which any process of negative regulation of transcription is abnormal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal negative regulation of transcription during G0","synonyms":[{"name":"abnormal down regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal down regulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal down-regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal down-regulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal downregulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal downregulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal inhibition of gene-specific transcription during G0","type":"related"},{"name":"abnormal inhibition of transcription, DNA-dependent, during G0","type":"narrow"},{"name":"abnormal negative regulation of cellular transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal negative regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal negative regulation of transcription during cell quiescence","type":"exact"},{"name":"abnormal negative regulation of transcription during quiescence","type":"exact"},{"name":"abnormal negative regulation of transcription, DNA-dependent, during G0","type":"exact"}],"termid":"FYPO:0004276"}


id: GO:0043886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a carboxysome shell, an organelle found in all cyanobacteria and some chemoautotrophs, consisting of a proteinaceous coat and enzymes for the fixation of CO2.","definition_xrefs":["PMID:28934381","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of carboxysome shell","synonyms":[{"name":"structural constituent of carboxysome","type":"related"}],"termid":"GO:0043886"}


id: MONDO:0016285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary carcinoma that involves the uterine cervix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical carcinoma","termid":"MONDO:0005131"},{"relation_name":"is_a","term_name":"papillary carcinoma","termid":"MONDO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary carcinoma of the cervix uteri","secondary_identifiers":["ICD10CM:C53.0","Orphanet:213817","GARD:20497"],"synonyms":[{"name":"cervical papillary carcinoma","type":"exact"},{"name":"uterine cervix papillary carcinoma","type":"exact"}],"termid":"MONDO:0016285","xrefs":{"Monarch":{"xref_id":"0016285"}}}


id: PR:O14042
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 90B, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01772","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein fmp32, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.09","secondary_identifiers":["UniProtKB:O14042"],"synonyms":[{"name":"Spom972h-CCDC90B","type":"exact"}],"termid":"PR:O14042"}


id: PBO:0078623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 72","termid":"PBO:0078623"}


id: SO:1000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ring chromosome which is a copy of another chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"free","termid":"SO:0001516"},{"relation_name":"is_a","term_name":"ring_chromosome","termid":"SO:1000045"},{"relation_name":"is_a","term_name":"free_duplication","termid":"SO:1000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_ring_duplication","synonyms":[{"name":"(Drosophila)R","type":"related"},{"name":"free ring duplication","type":"exact"}],"termid":"SO:1000145"}


id: GO:0010202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low fluence red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Low fluence red light is defined in this case as short pulses of red light followed by darkness, providing a light level of 0.001-0.1 mmol/m2/sec.","definition_xrefs":["GOC:mtg_far_red","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to low light intensity stimulus","termid":"GO:0009645"},{"relation_name":"is_a","term_name":"response to red light","termid":"GO:0010114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low fluence red light stimulus","termid":"GO:0010202"}


id: PR:P05501
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05077","PRO:DNx","PANTHER:PTHR19271:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.05","secondary_identifiers":["UniProtKB:P05501"],"synonyms":[{"name":"Spom972h-MT-CYB","type":"exact"},{"name":"complex III subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"complex III subunit III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome b-c1 complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex cytochrome b subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05501"}


id: PBO:0109360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase","termid":"PBO:0109360"}


id: PBO:0091587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Sdj1","termid":"PBO:0091587"}


id: GO:0004636
data:
  {"annotated_genes":["SJAG_02400"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107021],"is_not":false,"summary":null,"term":"GO:0004636"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(5-phospho-D-ribosyl)-ATP + H2O = 1-(5-phosphonatoribosyl)-5'-AMP + diphosphate + H+.","definition_xrefs":["RHEA:22828","EC:3.6.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phosphoribosyl-ATP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HISTPRATPHYD-RXN","KEGG_REACTION:R04035"],"synonyms":[{"name":"1-(5-phosphoribosyl)-ATP diphosphohydrolase activity","type":"related"},{"name":"phosphoribosyl-ATP pyrophosphatase activity","type":"exact"},{"name":"phosphoribosyladenosine triphosphate pyrophosphatase activity","type":"related"}],"termid":"GO:0004636","terms_by_termid":{"GO:0004636":null}}


id: GO:0047705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin + O2 = 2 biliverdin + 2 H2O.","definition_xrefs":["RHEA:20980","EC:1.3.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"bilirubin oxidase activity","secondary_identifiers":["KEGG_REACTION:R02394","MetaCyc:BILIRUBIN-OXIDASE-RXN"],"synonyms":[{"name":"bilirubin oxidase M-1","type":"related"},{"name":"bilirubin:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047705"}


id: PBO:0066494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 5","termid":"PBO:0066494"}


id: MONDO:0025113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of birds which are raised as a source of meat or eggs for human consumption and are usually found in barnyards, hatcheries, etc. The concept is differentiated from bird diseases which is for diseases of birds not considered poultry and usually found in zoos, parks, and the wild.","definition_xrefs":["MESH:D011201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poultry disease","synonyms":[{"name":"disease, poultry","type":"related"},{"name":"diseases, poultry","type":"related"},{"name":"poultry disease","type":"exact"}],"termid":"MONDO:0025113","xrefs":{"Monarch":{"xref_id":"0025113"}}}


id: PBO:0065130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cGMP-dependent 2","termid":"PBO:0065130"}


id: MONDO:0011784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Moyamoya disease in which the cause of the disease is a mutation in the RNF213 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Moyamoya disease","termid":"MONDO:0016820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Moyamoya disease 2","secondary_identifiers":["MEDGEN:339584","GARD:15410","MESH:C536992","NCIT:C183312","OMIM:607151","UMLS:C1846689"],"synonyms":[{"name":"MYMY2","type":"related"},{"name":"Moyamoya disease 2","type":"exact"},{"name":"Moyamoya disease caused by mutation in RNF213","type":"exact"},{"name":"Moyamoya disease type 2","type":"exact"},{"name":"RNF213 Moyamoya disease","type":"exact"},{"name":"moyamoya disease 2, susceptibility to","type":"exact"}],"termid":"MONDO:0011784","xrefs":{"Monarch":{"xref_id":"0011784"}}}


