# terms

id: PBO:0028783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mRNA-derived_small_RNA_level","termid":"PBO:0028783"}


id: PBO:0109118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 18, RPL3 N3(tau)-histidine","termid":"PBO:0109118"}


id: MONDO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal palmoplantar keratoderma with joint keratoses","secondary_identifiers":["Orphanet:370002","MEDGEN:1667811","GARD:17596","UMLS:C4755302"],"termid":"MONDO:0018252","xrefs":{"Monarch":{"xref_id":"0018252"}}}


id: MONDO:0009961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal and mullerian duct hypoplasia","secondary_identifiers":["MEDGEN:340326","MESH:C564853","OMIM:266810","UMLS:C1849439"],"synonyms":[{"name":"renal and mullerian duct hypoplasia","type":"exact"}],"termid":"MONDO:0009961","xrefs":{"Monarch":{"xref_id":"0009961"}}}


id: PBO:0068851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 89, pseudogene","termid":"PBO:0068851"}


id: PBO:0071217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 58","termid":"PBO:0071217"}


id: PBO:0053869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1144","termid":"PBO:0053869"}


id: FYPO:0002575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein a region in a chromosome that contains one or more long terminal repeats (LTRs) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromosome at long terminal repeat","synonyms":[{"name":"normal protein localisation to chromosome at long terminal repeat","type":"exact"},{"name":"normal protein localization to LTR","type":"exact"},{"name":"normal protein localization to chromosome at LTR","type":"exact"},{"name":"normal protein localization to chromosome at long terminal repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromosome at long terminal repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002575"}


id: PR:O74852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.02 gene.","definition_xrefs":["UniProtKB:O74852","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C18.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.02","synonyms":[{"name":"Spom972h-SPCC18.02","type":"exact"}],"termid":"PR:O74852"}


id: MONDO:0014000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital heart malformation in which the cause of the disease is a mutation in the TAB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart defects, multiple types","termid":"MONDO:0000119"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart defects, multiple types, 2","secondary_identifiers":["OMIM:614980","UMLS:C3554279","MEDGEN:767193"],"synonyms":[{"name":"CHTD2","type":"related"},{"name":"TAB2 congenital heart malformation","type":"exact"},{"name":"congenital heart defects, multiple types, 2","type":"exact"},{"name":"congenital heart defects, nonsyndromic, 2","type":"exact"},{"name":"congenital heart malformation caused by mutation in TAB2","type":"exact"}],"termid":"MONDO:0014000","xrefs":{"Monarch":{"xref_id":"0014000"}}}


id: PBO:0067454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 578, pseudogene","termid":"PBO:0067454"}


id: PR:O74463
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1739.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1739.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.01","synonyms":[{"name":"Spom972h-SPCC1739.01","type":"exact"}],"termid":"PR:O74463"}


id: GO:0004047
data:
  {"annotated_genes":["SJAG_03641","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95601,112163],"is_not":false,"summary":null,"term":"GO:0004047"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein.","definition_xrefs":["EC:2.1.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"aminomethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GCVT-RXN","RHEA:16945","Reactome:R-HSA-5693977"],"synonyms":[{"name":"S-aminomethyldihydrolipoylprotein:(6S)-tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"T-protein","type":"related"},{"name":"glycine synthase activity","type":"related"},{"name":"glycine-cleavage system T-protein activity","type":"related"},{"name":"protein-8-S-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"protein-S8-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"tetrahydrofolate aminomethyltransferase activity","type":"related"}],"termid":"GO:0004047","terms_by_termid":{"GO:0004047":null}}


id: PBO:0090387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-Z, alpha-1,2-mannosyltransferase Smp3","termid":"PBO:0090387"}


id: GO:0070835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of chromium (Cr) ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chromium ion transmembrane transporter activity","termid":"GO:0070835"}


id: MONDO:0010154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trigonocephaly-bifid nose-acral anomalies syndrome is characterized by trigonocephaly, brachycephaly, bulbous nose (bifid at the tip), micrognathia, macrostomia, hypotonia and relatively broad metatarsals and phalanges.","definition_xrefs":["Orphanet:3368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigonocephaly-bifid nose-acral anomalies syndrome","secondary_identifiers":["MEDGEN:341296","OMIM:275595","MESH:C564759","UMLS:C1848743","GARD:5126"],"synonyms":[{"name":"trigonobrachycephaly, bulbous bifid nose, macrostomia, micrognathia, acral anomalies, and hypotonia","type":"related"},{"name":"trigonobrachycephaly, bulbous bifid nose, micrognathia, and abnormalities of the hands and feet","type":"related"},{"name":"trigonocephaly - bifid nose - acral anomalies","type":"related"}],"termid":"MONDO:0010154","xrefs":{"Monarch":{"xref_id":"0010154"}}}


id: MONDO:0020466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Turner syndrome","termid":"MONDO:0019499"},{"relation_name":"is_a","term_name":"monosomy","termid":"MONDO:0020639"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"monosomy X","secondary_identifiers":["SCTID:710008008","Orphanet:99226","UMLS:C0242526","NCIT:C36630","MEDGEN:116607","icd11.foundation:95979116","GARD:19676"],"synonyms":[{"name":"monosomy type X","type":"exact"}],"termid":"MONDO:0020466","xrefs":{"Monarch":{"xref_id":"0020466"}}}


id: PBO:0034329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_prototype","termid":"PBO:0034329"}


id: PBO:0002611
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial morphology and distribution","termid":"PBO:0002611"}


id: MONDO:0008781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A juvenile amyotrophic lateral sclerosis that is slowly progressive with concomitantly progressive dementia.","definition_xrefs":["DOID:0110067","PMID:5692341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile amyotrophic lateral sclerosis","termid":"MONDO:0017593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"juvenile amyotrophic lateral sclerosis with dementia","secondary_identifiers":["MEDGEN:395347","UMLS:C1859806","MESH:C565956","OMIM:205200"],"synonyms":[{"name":"ALS-dementia Complex","type":"related"},{"name":"ALS-dementia complex","type":"exact"},{"name":"amyotrophic lateral sclerosis, juvenile, with dementia","type":"related"}],"termid":"MONDO:0008781","xrefs":{"Monarch":{"xref_id":"0008781"}}}


id: PBO:0082350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the SFI superfamily; involved in nonsense mediated mRNA decay; required for efficient translation termination at nonsense codons and targeting of NMD substrates to P-bodies; binds to the small ribosomal subunit via an interaction with Rps26; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0082350"}


id: MONDO:0016637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thrombotic disorder due to an acquired platelet anomaly (obsolete MONDO:0016637)","secondary_identifiers":["Orphanet:248404"],"termid":"MONDO:0016637","xrefs":{"Monarch":{"xref_id":"0016637"}}}


id: GO:0047251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylthioacetohydroximate + UDP-D-glucose = desulfoglucotropeolin + UDP.","definition_xrefs":["EC:2.4.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thiohydroximate beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.195-RXN","RHEA:13757"],"synonyms":[{"name":"N-hydroxythioamide S-beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-hydroxy-2-phenylethanethioamide S-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:thiohydroximate S-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:thiohydroximate glucosyltransferase activity","type":"related"},{"name":"desulfoglucosinolate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"thiohydroximate S-glucosyltransferase activity","type":"related"},{"name":"thiohydroximate glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-thiohydroximate glucosyltransferase activity","type":"related"}],"termid":"GO:0047251"}


id: PATO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loud","termid":"PATO:0001528"}


id: MOD:01447
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-(dihydroxymethyl)-L-methionine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:12595263","PubMed:9159480","RESID:AA0493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(dihydroxymethyl)-L-methionine (Met)","synonyms":[{"name":"(2S)-2-[(dihydroxymethyl)amino]-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"N-(dihydroxymethyl)-L-methionine","type":"exact"},{"name":"N-formyl-L-methionine hydrate","type":"exact"},{"name":"N-orthoformylmethionine","type":"exact"}],"termid":"MOD:01447"}


id: PBO:0026761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_cellular_response_to_UV","termid":"PBO:0026761"}


id: PBO:0028147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleolus","termid":"PBO:0028147"}


id: GO:0060588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of lipoprotein lipid oxidation. Lipoprotein lipid oxidation is the modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipoprotein oxidation","termid":"GO:0034443"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of lipoprotein lipid oxidation","termid":"GO:0060587"},{"relation_name":"negatively_regulates","term_name":"lipoprotein lipid oxidation","termid":"GO:0034439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein lipid oxidation","termid":"GO:0060588"}


id: PBO:0042482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 8","termid":"PBO:0042482"}


id: PBO:0003115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS15 repeat family actin cortical patch component (predicted)","termid":"PBO:0003115"}


id: GO:0018301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into an iron-sulfur cluster by tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon.","definition_xrefs":["RESID:AA0268"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon (obsolete GO:0018301)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-cysteine persulphido-bis-L-glutamato-L-histidino tetrairon","type":"exact"}],"termid":"GO:0018301"}


id: MONDO:0010352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 82","secondary_identifiers":["MEDGEN:337201","DOID:0112052","OMIM:300518","UMLS:C1845286","GARD:22681","MESH:C564496"],"synonyms":[{"name":"MRX82","type":"exact"},{"name":"intellectual disability, X-linked 82","type":"exact"},{"name":"mental retardation, X-linked 82","type":"related"},{"name":"mental retardation, X-linked 82, X-linked recessive","type":"exact"}],"termid":"MONDO:0010352","xrefs":{"Monarch":{"xref_id":"0010352"}}}


id: PBO:0076040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 38","termid":"PBO:0076040"}


id: SO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000968 sequence_replication_mode (obsolete SO:0000968)","synonyms":[{"name":"sequence replication mode","type":"exact"}],"termid":"SO:0000968"}


id: GO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation","termid":"GO:0050678"}


id: MONDO:0016522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of conotruncal heart defects, myelomeningocele and craniofacial dysmorphism similar to that seen in monosomy 22q11.","definition_xrefs":["Orphanet:2351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kousseff syndrome","secondary_identifiers":["UMLS:C2931444","SCTID:726083008","MESH:C537223","MEDGEN:444057","GARD:4752"],"synonyms":[{"name":"sacral meningocele conotruncal heart defects","type":"related"},{"name":"sacral meningocele, conotruncal heart defects, and minor anomalies of head and neck","type":"related"},{"name":"sacral meningocele-conotruncal heart defects syndrome","type":"exact"}],"termid":"MONDO:0016522","xrefs":{"Monarch":{"xref_id":"0016522"}}}


id: PBO:0002684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl-sulfate kinase (predicted)","termid":"PBO:0002684"}


id: MONDO:0019745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystinuria","termid":"MONDO:0009067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005240"],"is_obsolete":false,"name":"cystinuria type A","secondary_identifiers":["Orphanet:93612","UMLS:C1857388","GARD:16827","icd11.foundation:1172657361","MEDGEN:347441","MESH:C565652"],"termid":"MONDO:0019745","xrefs":{"Monarch":{"xref_id":"0019745"}}}


id: PBO:0080110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urotensin 2","termid":"PBO:0080110"}


id: GO:0033566
data:
  {"annotated_genes":["SJAG_01756"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990735"}]},"cv_name":"biological_process","definition":"Any process in which a gamma-tubulin complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"gamma-tubulin complex localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of gamma-tubulin complex localization","type":"exact"},{"name":"gamma-tubulin complex localisation","type":"exact"}],"termid":"GO:0033566","terms_by_termid":{"GO:1990735":null}}


id: PR:P0CT53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.09c","synonyms":[{"name":"EF-1-alpha-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef101","type":"exact"}],"termid":"PR:P0CT53"}


id: MONDO:0003547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histiocytic and dendritic cell cancer (obsolete MONDO:0003547)","secondary_identifiers":["NCIT:C9294"],"termid":"MONDO:0003547","xrefs":{"Monarch":{"xref_id":"0003547"}}}


id: PATO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's decomposition into component parts.","definition_xrefs":["Medical-dictionary:Medical-dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decayed","termid":"PATO:0001432"}


id: GO:0047037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (7S)-salutaridinol + NADP+ = H+ + NADPH + salutaridine.","definition_xrefs":["RHEA:10108","EC:1.1.1.248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"salutaridine reductase (NADPH) activity","secondary_identifiers":["KEGG_REACTION:R04697","MetaCyc:1.1.1.248-RXN"],"synonyms":[{"name":"salutaridinol:NADP+ 7-oxidoreductase activity","type":"related"}],"termid":"GO:0047037"}


id: PBO:0090463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Dis3","termid":"PBO:0090463"}


id: PBO:0078319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 1","termid":"PBO:0078319"}


id: PBO:0076511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 12 pseudogene","termid":"PBO:0076511"}


id: GO:0009052
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  {"annotated_genes":["SJAG_04263","SJAG_00501","SJAG_00070","SJAG_03934"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88149,95558,107581,112943],"is_not":false,"summary":null,"term":"GO:0009052"}]},"cv_name":"biological_process","definition":"The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.","definition_xrefs":["ISBN:0198506732","MetaCyc:NONOXIPENT-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"part_of","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_03934":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"pentose-phosphate shunt, non-oxidative branch","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pentose phosphate pathway, non-oxidative branch","type":"exact"},{"name":"pentose phosphate shunt, non-oxidative branch","type":"exact"},{"name":"pentose-phosphate pathway, non-oxidative branch","type":"exact"}],"termid":"GO:0009052","terms_by_termid":{"GO:0009052":null}}


id: PBO:0038888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 1","termid":"PBO:0038888"}


id: PBO:0055489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2923","termid":"PBO:0055489"}


id: PBO:0065225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 5 like","termid":"PBO:0065225"}


id: MONDO:0010314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral perisylvian polymicrogyria","termid":"MONDO:0020340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"polymicrogyria, bilateral perisylvian, X-linked","secondary_identifiers":["OMIM:300388","SCTID:438583008","GARD:15256"],"synonyms":[{"name":"BPP","type":"related"},{"name":"BPPX","type":"exact"},{"name":"PMGX","type":"related"},{"name":"perisylvian syndrome, congenital bilateral","type":"related"},{"name":"polymicrogyria, bilateral perisylvian, X-linked","type":"exact"},{"name":"polymicrogyria, bilateral perisylvian, X-linked dominant","type":"exact"}],"termid":"MONDO:0010314","xrefs":{"Monarch":{"xref_id":"0010314"}}}


id: PBO:0080568
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and FYVE domain containing 3","termid":"PBO:0080568"}


id: PBO:0084946
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multifunctional enzyme of the folic acid biosynthesis pathway; has dihydropteroate synthetase, dihydro-6-hydroxymethylpterin pyrophosphokinase, and dihydroneopterin aldolase activities","termid":"PBO:0084946"}


id: GO:0071788
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  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64105],"is_not":false,"summary":null,"term":"GO:0071788"}]},"cv_name":"biological_process","definition":"The organization process that preserves the endoplasmic reticulum (ER) tubular network in a stable functional or structural state. The ER tubular network is the ER part that comprises the membranes with high curvature in cross-section.","definition_xrefs":["PMID:16469703","GOC:mah","PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum tubular network maintenance","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"ER tubular network maintenance","type":"exact"}],"termid":"GO:0071788","terms_by_termid":{"GO:0071788":null}}


id: GO:0002616
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of macrophage antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"macrophage antigen processing and presentation","termid":"GO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage antigen processing and presentation","termid":"GO:0002616"}


id: MONDO:0001450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arachnoiditis (obsolete MONDO:0001450)","termid":"MONDO:0001450","xrefs":{"Monarch":{"xref_id":"0001450"}}}


id: PBO:0079623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 M pseudogene 1","termid":"PBO:0079623"}


id: PBO:0053113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1","termid":"PBO:0053113"}


id: MONDO:0003221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sclerosing hemangioma (obsolete MONDO:0003221)","termid":"MONDO:0003221","xrefs":{"Monarch":{"xref_id":"0003221"}}}


id: PATO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000478 poor value (obsolete PATO:0000478)","termid":"PATO:0000478"}


id: PBO:0085696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in resistance to nitrosoguanidine and 6-azauracil; expression is regulated by transcription factors involved in multidrug resistance; SNG1 has a paralog, YJR015W, that arose from the whole genome duplication","termid":"PBO:0085696"}


id: PBO:0055823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRAT domain containing 1","termid":"PBO:0055823"}


id: PBO:0074623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 21B","termid":"PBO:0074623"}


id: GO:0052494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its symbiont's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by host of symbiont vascular system (obsolete GO:0052494)","termid":"GO:0052494"}


id: GO:0098796
data:
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complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098796","terms_by_termid":{"GO:0000136":null,"GO:0000220":null,"GO:0000221":null,"GO:0000506":null,"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0000836":null,"GO:0001401":null,"GO:0001405":null,"GO:0005742":null,"GO:0005744":null,"GO:0005745":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0005834":null,"GO:0005891":null,"GO:0008250":null,"GO:0030121":null,"GO:0030122":null,"GO:0030123":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030131":null,"GO:0030904":null,"GO:0030905":null,"GO:0030906":null,"GO:0031201":null,"GO:0031207":null,"GO:0031942":null,"GO:0032478":null,"GO:0032865":null,"GO:0032936":null,"GO:0033176":null,"GO:0033254":null,"GO:0033573":null,"GO:0034098":null,"GO:0034271":null,"GO:0034272":null,"GO:0034424":null,"GO:0034993":null,"GO:0036266":null,"GO:0038038":null,"GO:0042720":null,"GO:0042721":null,"GO:0042765":null,"GO:0043541":null,"GO:0044695":null,"GO:0045259":null,"GO:0045261":null,"GO:0045263":null,"GO:0045273":null,"GO:0045275":null,"GO:0045277":null,"GO:0061617":null,"GO:0070772":null,"GO:0071261":null,"GO:0071439":null,"GO:0071595":null,"GO:0071986":null,"GO:0072546":null,"GO:0140275":null,"GO:0140497":null,"GO:0140595":null,"GO:0160005":null,"GO:1902500":null,"GO:1990524":null,"GO:1990604":null,"GO:1990612":null,"GO:1990862":null}}


id: PBO:0030713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock_during_vegetative_growth","termid":"PBO:0030713"}


id: FYPO:0005995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature long non-coding RNA (lncRNA) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased lncRNA level","synonyms":[{"name":"increased lncRNA accumulation","type":"related"},{"name":"increased lncRNA level during mitotic cell cycle","type":"related"},{"name":"increased lncRNA level during vegetative growth","type":"exact"},{"name":"increased lncRNA transcript level","type":"broad"},{"name":"increased long non-coding RNA level","type":"exact"},{"name":"increased mature lncRNA level","type":"exact"}],"termid":"FYPO:0005995"}


id: PBO:0084682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial C1-tetrahydrofolate synthase; involved in interconversion between different oxidation states of tetrahydrofolate (THF); provides activities of formyl-THF synthetase, methenyl-THF cyclohydrolase, and methylene-THF dehydrogenase","termid":"PBO:0084682"}


id: PBO:0036463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein, bacterial S-adenosyl L-homocysteinhydrolase","termid":"PBO:0036463"}


id: PBO:0052339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase D interacting substrate 220","termid":"PBO:0052339"}


id: PR:O74880
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An mRNA cap guanine-N7 methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12189:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cap guanine-N7 methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.10","secondary_identifiers":["UniProtKB:O74880"],"synonyms":[{"name":"SPCC330.10","type":"related"},{"name":"Spom972h-RNMT","type":"exact"},{"name":"mRNA (guanine-N(7)-)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA cap methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74880"}


id: GO:0004156
data:
  {"annotated_genes":["SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104108],"is_not":false,"summary":null,"term":"GO:0004156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate.","definition_xrefs":["EC:2.5.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydropteroate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19949","MetaCyc:H2PTEROATESYNTH-RXN"],"synonyms":[{"name":"(2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl-diphosphate:4-aminobenzoate 2-amino-4-hydroxydihydropteridine-6-methenyltransferase activity","type":"related"},{"name":"2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine-diphosphate:4-aminobenzoate 2-amino-4-hydroxydihydropteridine-6-methenyltransferase activity","type":"related"},{"name":"7,8-dihydropteroate synthase activity","type":"related"},{"name":"7,8-dihydropteroate synthetase activity","type":"related"},{"name":"7,8-dihydropteroic acid synthetase activity","type":"related"},{"name":"DHPS activity","type":"related"},{"name":"dihydropteroate diphosphorylase activity","type":"related"},{"name":"dihydropteroate pyrophosphorylase activity","type":"related"},{"name":"dihydropteroate synthetase activity","type":"related"},{"name":"dihydropteroic synthetase activity","type":"related"}],"termid":"GO:0004156","terms_by_termid":{"GO:0004156":null}}


id: MONDO:0044967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the limb.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete limb disorder (obsolete MONDO:0044967)","secondary_identifiers":["ICD9:V49.1","SCTID:128605003"],"synonyms":[{"name":"disease of limb","type":"exact"},{"name":"disease or disorder of limb","type":"exact"},{"name":"disorder of extremity","type":"exact"},{"name":"disorder of limb","type":"exact"},{"name":"limb disease","type":"exact"},{"name":"limb disease or disorder","type":"exact"}],"termid":"MONDO:0044967","xrefs":{"Monarch":{"xref_id":"0044967"}}}


id: MONDO:0020149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare eye disease due to a differentiation anomaly (obsolete MONDO:0020149)","secondary_identifiers":["Orphanet:98558"],"termid":"MONDO:0020149","xrefs":{"Monarch":{"xref_id":"0020149"}}}


id: GO:0031172
data:
  {"annotated_genes":["SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93314],"is_not":false,"summary":null,"term":"GO:0031172"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine + O2 + H+ = N5-hydroxy-L-ornithine + H2O.","definition_xrefs":["PMID:12828635","MetaCyc:RXN-11128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ornithine N5-monooxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:41508"],"synonyms":[{"name":"L-ornithine 5-monooxygenase activity","type":"exact"}],"termid":"GO:0031172","terms_by_termid":{"GO:0031172":null}}


id: MONDO:0006343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the ovary and is characterized by the presence of malignant epithelial cells that resemble malignant urothelial cells. There is no morphologic evidence of a benign or borderline Brenner tumor component present.","definition_xrefs":["NCIT:C5240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian transitional cell carcinoma","secondary_identifiers":["MEDGEN:233811","UMLS:C1335184","EFO:1000435","DOID:4000"],"synonyms":[{"name":"malignant ovarian transitional cell neoplasm","type":"exact"},{"name":"ovarian transitional cell cancer","type":"exact"},{"name":"ovarian transitional cell carcinoma","type":"exact"},{"name":"ovarian transitional cell neoplasm","type":"related"},{"name":"ovary transitional cell carcinoma","type":"exact"},{"name":"transitional cell carcinoma of ovary","type":"exact"},{"name":"transitional cell carcinoma of the ovary","type":"exact"}],"termid":"MONDO:0006343","xrefs":{"Monarch":{"xref_id":"0006343"}}}


id: PBO:0080547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 6","termid":"PBO:0080547"}


id: GO:0007390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The spreading of the amnioserosa from its compressed state to cover the whole of the dorsal surface. Initiating in the thorax and spreading posteriorly, it is accompanied by the transition from a parasegmental to segmental division of the embryo.","definition_xrefs":["GOC:bf","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-band shortening","synonyms":[{"name":"germ-band retraction","type":"exact"}],"termid":"GO:0007390"}


id: PBO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-anchoring factor Msd1","termid":"PBO:0018274"}


id: PR:O74428
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tco89 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C162.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.12","synonyms":[{"name":"Spom972h-tco89","type":"exact"}],"termid":"PR:O74428"}


id: PBO:0039075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 3","termid":"PBO:0039075"}


id: PBO:0045777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECSIT signaling integrator","termid":"PBO:0045777"}


id: PBO:0090129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Any1","termid":"PBO:0090129"}


id: PBO:0029774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_population_with_abnormal_spore_shape_(obsolete_FYPO:0002465)","termid":"PBO:0029774"}


id: PBO:0014581
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutaric aciduria 2A","termid":"PBO:0014581"}


id: PR:Q9HDU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0643 protein PB2B2.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.08","synonyms":[{"name":"Spom972h-SPBPB2B2.08","type":"exact"}],"termid":"PR:Q9HDU7"}


id: GO:0048793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephros over time, from its formation to the mature structure. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:bf","PMID:10535314","PMID:15968585","PMID:18322540","XAO:00002000","ZFA:0000151","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros development","synonyms":[{"name":"pronephric kidney development","type":"exact"}],"termid":"GO:0048793"}


id: SO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":".","definition_xrefs":["SO:ma"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000311 computed_feature_by_similarity (obsolete SO:0000311)","termid":"SO:0000311"}


id: PBO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRRAP family protein","termid":"PBO:0000246"}


id: _global:indirectly_positively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"indirectly_regulates","termid":"_global:indirectly_regulates"},{"relation_name":"is_a","term_name":"positively_regulates","termid":"_global:positively_regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_positively_regulates","secondary_identifiers":["RO:0002407"],"termid":"_global:indirectly_positively_regulates"}


id: PBO:0036274
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coil domain Telomerase Regulatory protein","termid":"PBO:0036274"}


id: MONDO:0012162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any patterned macular dystrophy in which the cause of the disease is a mutation in the CTNNA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned macular dystrophy","termid":"MONDO:0020381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"patterned macular dystrophy 2","secondary_identifiers":["OMIM:608970","GARD:18238","UMLS:C1837029","MEDGEN:332348","DOID:0060864"],"synonyms":[{"name":"CTNNA1 patterned macular dystrophy","type":"exact"},{"name":"MDPT2","type":"exact"},{"name":"butterfly-shaped pigmentary maculary dystrophy 2","type":"exact"},{"name":"macular dystrophy, butterfly-Shaped pigmentary, 2","type":"related"},{"name":"macular dystrophy, patterned, 2","type":"related"},{"name":"macular dystrophy, patterned, type 2","type":"exact"},{"name":"patterned macular dystrophy caused by mutation in CTNNA1","type":"exact"},{"name":"patterned macular dystrophy type 2","type":"exact"}],"termid":"MONDO:0012162","xrefs":{"Monarch":{"xref_id":"0012162"}}}


id: MOD:01776
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-methylthiocarbonylaminoethylcysteine.","definition_xrefs":["PubMed:18688235","PubMed:20608637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-methylthiocarbonylaminoethylcysteine (Cys)","synonyms":[{"name":"(2R)-2-amino-3-([2-([(methylsulfanyl)carbonyl]amino)ethyl]sulfanyl)propanoic acid","type":"exact"},{"name":"L-cysteine N-(methylthiocarbonyl)aziridine adduct","type":"exact"},{"name":"MTCTK","type":"exact"},{"name":"N6-methylthiocarbonyl-4-thialysine","type":"exact"},{"name":"S-[2-([(methylthio)carbonyl]amino)ethyl]-L-cysteine","type":"exact"}],"termid":"MOD:01776"}


id: PBO:0058518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5706","termid":"PBO:0058518"}


id: GO:1900510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of pentose catabolic process to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pentose catabolic process to ethanol (obsolete GO:1900510)","synonyms":[{"name":"down regulation of pentose catabolic process to ethanol","type":"exact"},{"name":"down regulation of pentose catabolism to ethanol","type":"exact"},{"name":"down-regulation of pentose catabolic process to ethanol","type":"exact"},{"name":"down-regulation of pentose catabolism to ethanol","type":"exact"},{"name":"downregulation of pentose catabolic process to ethanol","type":"exact"},{"name":"downregulation of pentose catabolism to ethanol","type":"exact"},{"name":"inhibition of pentose catabolic process to ethanol","type":"narrow"},{"name":"inhibition of pentose catabolism to ethanol","type":"exact"},{"name":"negative regulation of pentose catabolism to ethanol","type":"exact"}],"termid":"GO:1900510"}


id: MONDO:0009937
data:
  {"annotated_genes":["SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009329"}]},"cv_name":"mondo","definition":"A disorder characterized by pulmonary venous constriction or occlusion, resulting in pulmonary hypertension.","definition_xrefs":["NCIT:C85039"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pulmonary veno-occlusive disease and/or pulmonary capillary haemangiomatosis","termid":"MONDO:0018554"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00169":null},"genotype_count":0,"is_obsolete":false,"name":"pulmonary venoocclusive disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:31837","MEDGEN:18769","GARD:10153","ICD9:416.8","MedDRA:10037458","MESH:D011668","DOID:5453","SCTID:89420002","UMLS:C0034091","OMIMPS:265450","NANDO:1200427"],"synonyms":[{"name":"PVOD","type":"exact"},{"name":"obstructive disease of the pulmonary veins","type":"related"},{"name":"pulmonary capillary hemangiomatosis","type":"exact"},{"name":"pulmonary veno-occlusive disease","type":"exact"}],"termid":"MONDO:0009937","terms_by_termid":{"MONDO:0009329":null},"xrefs":{"Monarch":{"xref_id":"0009937"}}}


id: GO:0061155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized from the pulmonary artery endothelium. An pulmonary artery endothelium is an epithelium that lines the pulmonary artery.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"},{"relation_name":"part_of","term_name":"pulmonary artery morphogenesis","termid":"GO:0061156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary artery endothelial tube morphogenesis","termid":"GO:0061155"}


id: PBO:0078182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-6","termid":"PBO:0078182"}


id: PBO:0077238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 3","termid":"PBO:0077238"}


id: PBO:0071507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 10","termid":"PBO:0071507"}


id: PBO:0077617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 8","termid":"PBO:0077617"}


id: PBO:0040384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting accessory protein 2","termid":"PBO:0040384"}


id: GO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which transitional stage B cells acquire the specialized features of mature B cells in the spleen.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature B cell differentiation","synonyms":[{"name":"mature B lymphocyte differentiation","type":"exact"},{"name":"mature B-cell differentiation","type":"exact"},{"name":"mature B-lymphocyte differentiation","type":"exact"},{"name":"mature cell development","type":"related"}],"termid":"GO:0002335"}


id: GO:2001098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a tetrasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tetrasaccharide transport","termid":"GO:2001098"}


id: PBO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshift","termid":"PBO:0001898"}


id: _global:interaction_double_mutant_genotype
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_double_mutant_genotype","termid":"_global:interaction_double_mutant_genotype"}


id: MONDO:0008977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant cartilaginous matrix-producing mesenchymal neoplasm arising from the bone and soft tissue. It usually affects middle-aged to elderly adults. The pelvic bones, ribs, shoulder girdle, and long bones are the most common sites of involvement. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion.","definition_xrefs":["NCIT:C2946"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone sarcoma","termid":"MONDO:0021054"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"chondrosarcoma","secondary_identifiers":["HP:0006765","MedDRA:10008734","ICD9:170.9","OMIM:215300","NANDO:2200050","MESH:D002813","MEDGEN:3054","SCTID:443520009","EFO:0000333","ICDO:9220/3","UMLS:C0008479","Orphanet:55880","ONCOTREE:CHS","DOID:3371","GARD:6055"],"synonyms":[{"name":"chondrosarcoma","type":"exact"},{"name":"chondrosarcoma (disease)","type":"exact"},{"name":"chondrosarcoma of bone","type":"narrow"},{"name":"chondrosarcoma, malignant","type":"exact"},{"name":"chondrosarcoma, somatic mutation","type":"exact"},{"name":"primary chondrosarcoma of the bone","type":"related"}],"termid":"MONDO:0008977","xrefs":{"Monarch":{"xref_id":"0008977"}}}


id: PBO:0057140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR219A2 host gene","termid":"PBO:0057140"}


id: GO:1900876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nonadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonadec-1-ene metabolic process","synonyms":[{"name":"nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900876"}


id: GO:0046032
data:
  {"annotated_genes":["SJAG_00605","SJAG_00685","SJAG_05314","SJAG_06621","SJAG_02135","SJAG_02009","SJAG_00027","SJAG_04495","SJAG_04192","SJAG_00461","SJAG_02796","SJAG_02369","SJAG_02945","SJAG_04334","SJAG_03660","SJAG_00839","SJAG_04048","SJAG_02107","SJAG_03373","SJAG_01310","SJAG_03903","SJAG_03852","SJAG_06622","SJAG_00633","SJAG_02785","SJAG_03828"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102562,104987,103641,108078,108540,108079,108541,108543,108546,104617,97188,94210,97466,108082,108542,108545,108077,104616,108076,108544,104986,115486,104618,93723,108081,108080,102818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[103643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[87818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[97384,110719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[75326,72412],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[88421],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ADP catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ADP breakdown","type":"exact"},{"name":"ADP catabolism","type":"exact"},{"name":"ADP degradation","type":"exact"}],"termid":"GO:0046032","terms_by_termid":{"GO:0006096":null,"GO:0006110":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: GO:0003837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3.","definition_xrefs":["EC:3.5.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"beta-ureidopropionase activity","secondary_identifiers":["RHEA:11184","Reactome:R-HSA-73591","MetaCyc:BETA-UREIDOPROPIONASE-RXN","Reactome:R-HSA-73620"],"synonyms":[{"name":"N-carbamoyl-beta-alanine amidohydrolase activity","type":"related"}],"termid":"GO:0003837"}


id: GO:0046627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of insulin receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of insulin receptor signaling pathway","termid":"GO:0046626"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to insulin stimulus","termid":"GO:1900077"},{"relation_name":"negatively_regulates","term_name":"insulin receptor signaling pathway","termid":"GO:0008286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of insulin receptor signaling pathway","synonyms":[{"name":"down regulation of insulin receptor signaling pathway","type":"exact"},{"name":"down-regulation of insulin receptor signaling pathway","type":"exact"},{"name":"downregulation of insulin receptor signaling pathway","type":"exact"},{"name":"inhibition of insulin receptor signaling pathway","type":"narrow"},{"name":"negative regulation of insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0046627"}


id: PBO:0004780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn1","termid":"PBO:0004780"}


id: PBO:0040567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 2","termid":"PBO:0040567"}


id: PBO:0058101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4316","termid":"PBO:0058101"}


id: PBO:0079871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF1 RNA helicase and ATPase","termid":"PBO:0079871"}


id: MONDO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"neurenteric cyst","secondary_identifiers":["UMLS:C0027806","GARD:20975","MEDGEN:14343","icd11.foundation:172158971","Orphanet:268865"],"termid":"MONDO:0017087","xrefs":{"Monarch":{"xref_id":"0017087"}}}


id: PBO:0075179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 9","termid":"PBO:0075179"}


id: PBO:0058714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6842","termid":"PBO:0058714"}


id: PBO:0057531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 647","termid":"PBO:0057531"}


id: SO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that has been generated to act as a vector for foreign sequence.","direct_ancestors":[{"relation_name":"derives_from","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmid_vector","secondary_identifiers":["http://en.wikipedia.org/wiki/Plasmid_vector#Vectors"],"synonyms":[{"name":"plasmid vector","type":"exact"}],"termid":"SO:0000755"}


id: PBO:0049462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2 pseudogene 2","termid":"PBO:0049462"}


id: GO:0072276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric glomerulus vasculature are generated and organized. The metanephric glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the metanephric glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus vasculature morphogenesis","termid":"GO:0072103"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature development","termid":"GO:0072239"},{"relation_name":"part_of","term_name":"metanephric glomerulus morphogenesis","termid":"GO:0072275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerulus vasculature morphogenesis","termid":"GO:0072276"}


id: FYPO:0007170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype an ascus contains four nuclei, as in wild type.","definition_xrefs":["PomBase:mah","PMID:20826461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal number of nuclei in ascus","termid":"FYPO:0007170"}


id: GO:0070158
data:
  {"annotated_genes":["SJAG_02977"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93864],"is_not":false,"summary":null,"term":"GO:0070158"}]},"cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA in a mitochondrion, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seryl-tRNA aminoacylation","termid":"GO:0006434"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0140053","GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial seryl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070158","terms_by_termid":{"GO:0070158":null}}


id: PBO:0031542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_homologous_chromosome_segregation","termid":"PBO:0031542"}


id: PBO:0065622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 2","termid":"PBO:0065622"}


id: GO:0070642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D5, (1S,3Z)-3-[(2E)-2-[(1R,3aS,7aR)-1-[(1R,4S)-4-ethyl-1,5-dimethylhexyl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylene-1-cyclohexanol.","definition_xrefs":["GOC:BHF","GOC:mah","PubChem_Compound:9547700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"vitamin D5 metabolic process","synonyms":[{"name":"vitamin D5 metabolism","type":"exact"}],"termid":"GO:0070642"}


id: MONDO:0004758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized defect in the visual field bordered by an area of normal vision. This occurs with a variety of eye diseases (e.g., retinal diseases and glaucoma); optic nerve diseases, and other conditions.","definition_xrefs":["MESH:D012607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scotoma","secondary_identifiers":["MEDGEN:19902","UMLS:C0036454","ICD9:368.43","HP:0000575","DOID:9335","ICD9:368.44","ICD9:368.42","ICD9:368.45"],"synonyms":[{"name":"blind spot area scotoma","type":"exact"},{"name":"enlarged angioscotoma","type":"exact"},{"name":"enlarged blind spot","type":"exact"},{"name":"enlarged paracaecal scotoma","type":"exact"},{"name":"generalised visual field contraction or constriction","type":"exact"},{"name":"generalized visual field contraction or constriction","type":"exact"},{"name":"scotoma","type":"exact"},{"name":"scotoma (disease)","type":"exact"},{"name":"scotoma of blind spot area","type":"exact"},{"name":"sector or arcuate visual field defects","type":"exact"}],"termid":"MONDO:0004758","xrefs":{"Monarch":{"xref_id":"0004758"}}}


id: PBO:0039349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy and beclin 1 regulator 1","termid":"PBO:0039349"}


id: FYPO:0003671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ATP binding","termid":"FYPO:0003671"}


id: GO:0044546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the NLRP3 inflammasome complex, occurring at the level of an individual cell.","definition_xrefs":["PMID:21048113","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0023052","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"NLRP3 inflammasome complex assembly","synonyms":[{"name":"NALP3 inflammasome complex assembly","type":"exact"},{"name":"NLRP3 inflammasome activation","type":"related"}],"termid":"GO:0044546"}


id: GO:0018554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxynaphthalene + O2 = 2-hydroxychromene-2-carboxylate. C6 of the substrate molecular may have an NH2 group attached.","definition_xrefs":["UM-BBD_enzymeID:r0336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"},{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1,2-dihydroxynaphthalene dioxygenase activity","secondary_identifiers":["EC:1.13.11.56","RHEA:27310"],"termid":"GO:0018554"}


id: MONDO:0019395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hinman syndrome (HS) or non-neurogenic neurogenic bladder is a voiding dysfunction of the bladder of neuropsychological origin that is characterized by functional bladder outlet obstruction in the absence of neurologic deficits.","definition_xrefs":["Orphanet:84085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hinman syndrome","secondary_identifiers":["UMLS:C1997362","MEDGEN:744421","SCTID:429233001","GARD:19047","ICD9:596.59"],"synonyms":[{"name":"HAS","type":"exact"},{"name":"HS","type":"exact"},{"name":"Hinman-Allen syndrome","type":"exact"},{"name":"non-neurogenic neurogenic bladder","type":"exact"},{"name":"occult neuropathic bladder","type":"exact"}],"termid":"MONDO:0019395","xrefs":{"Monarch":{"xref_id":"0019395"}}}


id: GO:0050291
data:
  {"annotated_genes":["SJAG_02085","SJAG_02842"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91105,109224],"is_not":false,"summary":null,"term":"GO:0050291"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine.","definition_xrefs":["PMID:12069845","MetaCyc:SPHINGOSINE-N-ACYLTRANSFERASE-RXN","EC:2.3.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02085":null,"SJAG_02842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"sphingosine N-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:23768","Reactome:R-HSA-428185"],"synonyms":[{"name":"acyl-CoA:sphingosine N-acyltransferase activity","type":"related"},{"name":"ceramide synthase activity","type":"exact"},{"name":"ceramide synthetase activity","type":"related"},{"name":"dihydroceramide synthase activity","type":"exact"},{"name":"sphingosine acyltransferase activity","type":"related"}],"termid":"GO:0050291","terms_by_termid":{"GO:0050291":null}}


id: GO:0009408
data:
  {"annotated_genes":["SJAG_02381","SJAG_04055","SJAG_03949","SJAG_01584","SJAG_03527","SJAG_01186","SJAG_03319","SJAG_02266","SJAG_03815","SJAG_00436","SJAG_02426","SJAG_04567","SJAG_04388","SJAG_04187","SJAG_04082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103383,103495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[114631,114632,90018,94887,95674,99720,109154,91286,109155,104441,104155,88051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[115552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_02266":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_03319":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03949":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to heat","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006951"],"synonyms":[{"name":"response to heat shock","type":"narrow"}],"termid":"GO:0009408","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null}}


id: MONDO:0007567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Epstein-Barr virus insertion site 1 (obsolete MONDO:0007567)","secondary_identifiers":["OMIM:132850"],"synonyms":[{"name":"EBVS1","type":"related"},{"name":"Epstein-Barr VIRUS insertion site 1","type":"related"},{"name":"Epstein-Barr Virus insertion site type 1","type":"exact"},{"name":"Epstein-Barr Virus integration site","type":"related"},{"name":"Epstein-Barr virus insertion site 1","type":"exact"}],"termid":"MONDO:0007567","xrefs":{"Monarch":{"xref_id":"0007567"}}}


id: MONDO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Ohtahara syndrome (obsolete MONDO:0000418)","termid":"MONDO:0000418","xrefs":{"Monarch":{"xref_id":"0000418"}}}


id: PR:P26674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P26674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ste6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.01","synonyms":[{"name":"Spom972h-ste6","type":"exact"}],"termid":"PR:P26674"}


id: MONDO:0850054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemophilia B leyden","secondary_identifiers":["Orphanet:617930","GARD:22455"],"termid":"MONDO:0850054","xrefs":{"Monarch":{"xref_id":"0850054"}}}


id: PBO:0067551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 702, pseudogene","termid":"PBO:0067551"}


id: PBO:0091188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 2","termid":"PBO:0091188"}


id: GO:0031602
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome core complex (obsolete GO:0031602)","termid":"GO:0031602"}


id: PBO:0070809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 39","termid":"PBO:0070809"}


id: PBO:0084515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm F33D4.7/EMC-6, fly CG11781, human TMEM93","termid":"PBO:0084515"}


id: MONDO:0007707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the small intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of small intestine","termid":"MONDO:0021501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hemangiomas of small intestine","secondary_identifiers":["UMLS:C1841654","MESH:C564201","OMIM:140900","MEDGEN:331098"],"synonyms":[{"name":"hemangioma of small intestine","type":"exact"},{"name":"hemangiomas of small intestine","type":"exact"},{"name":"small intestine hemangioma","type":"exact"}],"termid":"MONDO:0007707","xrefs":{"Monarch":{"xref_id":"0007707"}}}


id: FYPO:0002907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which telomeres have fused, forming circular chromosomes, during G1 phase of the mitotic cell cycle.","definition_xrefs":["PMID:23133674","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circularized chromosome","termid":"FYPO:0002702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0000707","FYPO:0005447"],"is_obsolete":false,"name":"circularized chromosome during mitotic G1 phase","synonyms":[{"name":"circular chromosomes during mitotic G1 phase","type":"exact"},{"name":"circularised chromosome during mitotic G1 phase","type":"exact"},{"name":"circularized chromosome during G1 during vegetative growth","type":"exact"},{"name":"fused telomeres during mitotic G1 phase","type":"related"},{"name":"telomere end fusion during mitotic G1 phase","type":"related"},{"name":"telomere fusion during mitotic G1 phase","type":"related"},{"name":"telomeres fused during mitotic G1 phase","type":"related"}],"termid":"FYPO:0002907"}


id: PBO:0004034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec63 (predicted)","termid":"PBO:0004034"}


id: PBO:0085360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein involved in vacuole inheritance; degraded in late M phase of the cell cycle; acts as a vacuole-specific receptor for myosin Myo2p; involved in regulation of asymmetric inheritance of aggregated/misfolded proteins and age reset","termid":"PBO:0085360"}


id: MOD:00948
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-dephospho","termid":"MOD:00948"}


id: GO:0004996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thyroid-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thyroid-stimulating hormone receptor activity","secondary_identifiers":["Wikipedia:Thyrotropin_receptor"],"synonyms":[{"name":"TSH receptor activity","type":"exact"},{"name":"thyroid stimulating hormone receptor activity","type":"exact"},{"name":"thyrotropin receptor","type":"exact"}],"termid":"GO:0004996"}


id: GO:0002750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen via macropinocytosis.","definition_xrefs":["PMID:16556257","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation following macropinocytosis","termid":"GO:0002750"}


id: GO:1990435
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at the upper end of a stereocilia tip link that provides the anchor in the stereocilia membrane on the side of the stereocilium where the tip link ends.","definition_xrefs":["PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia tip-link density","termid":"GO:1990427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"upper tip-link density","synonyms":[{"name":"UTLD","type":"exact"}],"termid":"GO:1990435"}


id: PBO:0045411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 4","termid":"PBO:0045411"}


id: PBO:0074579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stannin","termid":"PBO:0074579"}


id: GO:0047204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate + chlorogenate = (-)-quinate + 2-O-caffeoylglucarate.","definition_xrefs":["EC:2.3.1.98","RHEA:23204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"chlorogenate-glucarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.98-RXN","KEGG_REACTION:R02998"],"synonyms":[{"name":"chlorogenate:glucarate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"chlorogenate:glucarate caffeoyltransferase activity","type":"related"},{"name":"chlorogenic acid:glucaric acid O-caffeoyltransferase activity","type":"related"}],"termid":"GO:0047204"}


id: MONDO:1010644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia B that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B, non-human animal","termid":"MONDO:1010075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia B, domestic cat","secondary_identifiers":["OMIA:000438-9685"],"termid":"MONDO:1010644","xrefs":{"Monarch":{"xref_id":"1010644"}}}


id: MONDO:0017783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital pancreatic cyst","secondary_identifiers":["MEDGEN:574418","icd11.foundation:981856956","ICD10CM:Q45.2","Orphanet:313906","GARD:21361","UMLS:C0341480","SCTID:204808002"],"synonyms":[{"name":"neonatal congenital pancreatic cyst","type":"exact"},{"name":"true congenital pancreatic cyst","type":"exact"}],"termid":"MONDO:0017783","xrefs":{"Monarch":{"xref_id":"0017783"}}}


id: PR:O94619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adn2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion defective protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.10c","synonyms":[{"name":"LisH domain-containing protein adn2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-adn2","type":"exact"}],"termid":"PR:O94619"}


id: PBO:0083191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized ORF YML133C","termid":"PBO:0083191"}


id: MONDO:1012757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in dogs due to a mutation in the VLDLR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar hypoplasia, VLDLR-associated, dog","secondary_identifiers":["OMIA:001947-9615"],"synonyms":[{"name":"Dandy-Walker-like malformation","type":"related"},{"name":"inferior cerebellar hypoplasia","type":"related"}],"termid":"MONDO:1012757","xrefs":{"Monarch":{"xref_id":"1012757"}}}


id: MONDO:0100150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the musculoskeletal system caused by pathogenic variants in the RYR1 gene, which encodes the ryanodine receptor type 1 protein. These variants are associated with a variety of overlapping features characterized by symmetric proximal muscle weakness, often with pronounced facial weakness with or without dysmorphism and ophthalmoparesis/ophthalmoplegia with ptosis, bulbar weakness, significant respiratory involvement, severe neonatal hypotonia, scoliosis, orthopedic deformities including arthrogryposis, hip dislocation, club feet, and King Denborough syndrome (pectus carinatum or excavatum, short stature, joint contractures, facial and skeletal deformities), malignant hyperthermia susceptibility, anesthesia-induced rhabdomyolysis, fatigue, exercise-induced hyperthermia/exertional heat stroke, and exertional myalgia. Histologic findings on skeletal muscle biopsy reveal a wide range of structural abnormalities and can include central core disease, multiminicore disease, cone-rod myopathy, centronuclear myopathy, and congenital fiber-type disproportion.","definition_xrefs":["PMID:30406384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"RYR1-related myopathy","synonyms":[{"name":"RYR1-related myopathy","type":"exact"}],"termid":"MONDO:0100150","xrefs":{"Monarch":{"xref_id":"0100150"}}}


id: PBO:0066943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 245","termid":"PBO:0066943"}


id: GO:0050883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Involuntary movement caused by the application of a stimulus to an organism and a subsequent movement. The signal processing of this movement takes place in the spinal cord.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal movement","termid":"GO:0050881"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"musculoskeletal movement, spinal reflex action","termid":"GO:0050883"}


id: PBO:0085262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Permease identified in lager brewing yeast strain Weihenstephan Nr.34; also in RM11-1a, but not S288C; subject to nitrogen catabolite repression and post-translational control, cellular localization dependent on nitrogen source quality","termid":"PBO:0085262"}


id: PBO:0065141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin","termid":"PBO:0065141"}


id: PBO:0061475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nardilysin convertase","termid":"PBO:0061475"}


id: PBO:0027556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_conjugation_frequency","termid":"PBO:0027556"}


id: PBO:0061369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 29","termid":"PBO:0061369"}


id: GO:0002830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a type 2 immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type 2 immune response","synonyms":[{"name":"activation of type 2 immune response","type":"narrow"},{"name":"positive regulation of T-helper 2 type immune response","type":"narrow"},{"name":"positive regulation of Th2 immune response","type":"narrow"},{"name":"stimulation of type 2 immune response","type":"narrow"},{"name":"up regulation of type 2 immune response","type":"exact"},{"name":"up-regulation of type 2 immune response","type":"exact"},{"name":"upregulation of type 2 immune response","type":"exact"}],"termid":"GO:0002830"}


id: MONDO:0014524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the FMN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 47","secondary_identifiers":["MEDGEN:863881","OMIM:616193","GARD:22569","DOID:0081211","UMLS:C4015444"],"synonyms":[{"name":"FMN2 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT47","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in FMN2","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 47","type":"exact"},{"name":"intellectual disability, autosomal recessive 47","type":"exact"},{"name":"intellectual disability, autosomal recessive type 47","type":"exact"},{"name":"mental retardation, autosomal recessive 47","type":"related"},{"name":"mental retardation, autosomal recessive type 47","type":"exact"}],"termid":"MONDO:0014524","xrefs":{"Monarch":{"xref_id":"0014524"}}}


id: PBO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 9","termid":"PBO:0060765"}


id: PBO:0069071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 318, pseudogene","termid":"PBO:0069071"}


id: MONDO:0020662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade serous epithelial neoplasm arising from the ovary. It is characterized by an atypical proliferation of serous-type epithelial cells without evidence of stromal invasion. It is often asymptomatic but rarely it may present with abdominal pain or abdominal enlargement due to rupture or torsion.","definition_xrefs":["NCIT:C5226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"borderline epithelial tumor of ovary","termid":"MONDO:0016093"},{"relation_name":"is_a","term_name":"ovarian serous tumor","termid":"MONDO:0037255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borderline ovarian serous tumor","secondary_identifiers":["EFO:1000139","MEDGEN:231957","UMLS:C1332598"],"synonyms":[{"name":"borderline ovarian serous neoplasm","type":"exact"},{"name":"borderline ovarian serous tumor","type":"exact"},{"name":"borderline serous neoplasm of ovary","type":"exact"},{"name":"borderline serous neoplasm of the ovary","type":"exact"},{"name":"borderline serous tumor of ovary","type":"exact"},{"name":"borderline serous tumor of the ovary","type":"exact"},{"name":"borderline serous tumour of ovary","type":"exact"},{"name":"borderline serous tumour of the ovary","type":"exact"},{"name":"ovarian serous neoplasm of low malignant potential","type":"exact"},{"name":"ovarian serous tumor of low malignant potential","type":"exact"},{"name":"ovarian serous tumour of low malignant potential","type":"exact"},{"name":"proliferating ovarian serous neoplasm","type":"exact"},{"name":"proliferating ovarian serous tumor","type":"exact"},{"name":"proliferating ovarian serous tumour","type":"exact"},{"name":"proliferating serous neoplasm of ovary","type":"exact"},{"name":"proliferating serous neoplasm of the ovary","type":"exact"},{"name":"proliferating serous tumor of ovary","type":"exact"},{"name":"proliferating serous tumor of the ovary","type":"exact"},{"name":"proliferating serous tumour of ovary","type":"exact"},{"name":"proliferating serous tumour of the ovary","type":"exact"},{"name":"serous neoplasm of ovary with low malignant potential","type":"exact"},{"name":"serous neoplasm of the ovary with low malignant potential","type":"exact"},{"name":"serous ovarian neoplasm of low malignant potential","type":"exact"},{"name":"serous ovarian tumor of low malignant potential","type":"exact"},{"name":"serous ovarian tumour of low malignant potential","type":"exact"},{"name":"serous tumor of ovary with low malignant potential","type":"exact"},{"name":"serous tumor of the ovary with low malignant potential","type":"exact"},{"name":"serous tumour of ovary with low malignant potential","type":"exact"},{"name":"serous tumour of the ovary with low malignant potential","type":"exact"}],"termid":"MONDO:0020662","xrefs":{"Monarch":{"xref_id":"0020662"}}}


id: GO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the binding of the Fc portion of an immunoglobulin by an Fc receptor capable of inhibiting an immune effector process contributing to an immune response. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Fc receptor mediated inhibitory signaling pathway","synonyms":[{"name":"Fc receptor mediated inhibitory signalling pathway","type":"exact"},{"name":"Fc-receptor mediated inhibitory signaling pathway","type":"exact"}],"termid":"GO:0002774"}


id: GO:0009103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:mr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide biosynthetic process","secondary_identifiers":["KEGG_PATHWAY:map00540"],"synonyms":[{"name":"LPS biosynthetic process","type":"exact"},{"name":"lipopolysaccharide anabolism","type":"exact"},{"name":"lipopolysaccharide biosynthesis","type":"exact"},{"name":"lipopolysaccharide formation","type":"exact"},{"name":"lipopolysaccharide synthesis","type":"exact"}],"termid":"GO:0009103"}


id: GO:0019455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cystine reductase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cystine reductase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cystine reductase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cystine reductase","type":"exact"}],"termid":"GO:0019455"}


id: FYPO:0004552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation exposure during mitotic G2 phase is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0001927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to ionizing radiation during mitotic G2 phase","synonyms":[{"name":"normal cell cycle delay following ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"normal cell cycle regulation during cellular response to ionizing radiation during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ionizing radiation during G2 phase","type":"exact"}],"termid":"FYPO:0004552"}


id: MONDO:0017568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrodysplasia scoliosis is a rare, genetic dysostosis disorder characterized by brachydactyly and other finger/toe anomalies (short and/or wide metacarpals, abnormal or absent metatarsals, broad halluces), carpal synostosis, fused cervical vertebrae, scoliosis and spina bifida occulta. There have been no further descriptions in the literature since 1984.","definition_xrefs":["Orphanet:2956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Prata-Liberal-Goncalves syndrome","secondary_identifiers":["GARD:491","MEDGEN:419156","UMLS:C2931761"],"synonyms":[{"name":"acrodysplasia scoliosis","type":"exact"},{"name":"brachydactyly-scoliosis-carpal fusion syndrome","type":"exact"}],"termid":"MONDO:0017568","xrefs":{"Monarch":{"xref_id":"0017568"}}}


id: GO:0009330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses DNA topoisomerase II (double strand cut, ATP-hydrolyzing) activity.","definition_xrefs":["WikiPedia:Type_II_topoisomerase","GOC:krc","GOC:bhm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex","termid":"GO:0009330"}


id: GO:0008603
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"}]},"cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme cAMP-dependent protein kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"cAMP-dependent protein kinase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3',5' cAMP-dependent protein kinase regulator activity","type":"exact"},{"name":"3',5'-cAMP-dependent protein kinase regulator activity","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-dependent protein kinase regulator activity","type":"exact"},{"name":"cAMP-dependent protein kinase, intrinsic regulator activity","type":"narrow"},{"name":"cyclic AMP-dependent protein kinase regulator activity","type":"exact"}],"termid":"GO:0008603","terms_by_termid":{"GO:0004862":null}}


id: PBO:0028384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere_inner_repeat","termid":"PBO:0028384"}


id: MONDO:0030690
data:
  {"annotated_genes":["SJAG_03855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86351],"is_not":false,"summary":null,"term":"MONDO:0030690"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, telomere-related, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619767","MEDGEN:1805650","UMLS:C5676927"],"synonyms":[{"name":"PFBMFT6","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, telomere-related, 6","type":"exact"}],"termid":"MONDO:0030690","terms_by_termid":{"MONDO:0030690":null},"xrefs":{"Monarch":{"xref_id":"0030690"}}}


id: PR:O94740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An hsp90 co-chaperone Cdc37 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12800:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsp90 co-chaperone Cdc37 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.10","secondary_identifiers":["UniProtKB:O94740"],"synonyms":[{"name":"SPBC9B6.10","type":"related"},{"name":"Spom972h-CDC37","type":"exact"},{"name":"cell division control protein 37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"hsp90 chaperone protein kinase-targeting subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94740"}


id: MONDO:0009312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of the peptidic growth factors is characterized by loss of subcutaneous fat layers on the limbs, lipodystrophy in the face and trunk and scleroderma-like skin disorders (thickened skin on the palms and soles and skin pigment changes on the limbs and trunk).","definition_xrefs":["Orphanet:1979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"lipodystrophy due to peptidic growth factors deficiency","secondary_identifiers":["MESH:C565529","OMIM:233805","icd11.foundation:1235390174","SCTID:724176001","MEDGEN:419375","UMLS:C2931279","GARD:12604"],"synonyms":[{"name":"Hoepffner Dreyer Reimers syndrome","type":"related"},{"name":"Hoepffner-Dreyer-Reimers syndrome","type":"exact"},{"name":"Werner-like syndrome due to combined Growth Factor deficiency","type":"related"},{"name":"Werner-like syndrome due to combined growth factor deficiency","type":"exact"},{"name":"combined insulin, insulin-like growth factor 1 (IGF1) and epidermal growth factor (EGF) deficiency","type":"exact"},{"name":"growth factors, combined defect OF","type":"related"},{"name":"insulin, insulin-like Growth Factor I, and Epidermal Growth Factor deficiency","type":"related"},{"name":"peptide growth factors deficiency","type":"related"},{"name":"peptidic growth factors deficiency","type":"related"}],"termid":"MONDO:0009312","xrefs":{"Monarch":{"xref_id":"0009312"}}}


id: GO:0080086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the filament over time, from its formation to the mature structure. Filament is the stalk of a stamen.","definition_xrefs":["PO:0009067","PMID:19139039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"stamen development","termid":"GO:0048443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen filament development","synonyms":[{"name":"filament development","type":"exact"}],"termid":"GO:0080086"}


id: GO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenite transmembrane transporter activity","termid":"GO:0015105"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"arsenite secondary active transmembrane transporter activity","secondary_identifiers":["GO:0008491"],"synonyms":[{"name":"arsenite porter activity","type":"related"}],"termid":"GO:0008490"}


id: PBO:0004097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease I Exo1","termid":"PBO:0004097"}


id: PBO:0066510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X6","termid":"PBO:0066510"}


id: PBO:0088976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup37","termid":"PBO:0088976"}


id: GO:1903207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hydrogen peroxide-induced neuron death.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000058","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hydrogen peroxide-induced neuron death (obsolete GO:1903207)","synonyms":[{"name":"regulation of neuron death in response to H2O2","type":"exact"},{"name":"regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"}],"termid":"GO:1903207"}


id: PBO:0046572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 14","termid":"PBO:0046572"}


id: PBO:0071232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 73","termid":"PBO:0071232"}


id: PBO:0044632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin like kinase 3","termid":"PBO:0044632"}


id: PBO:0058620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6752","termid":"PBO:0058620"}


id: PR:Q10430
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein Spc25 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04698","PRO:DNx","PANTHER:PTHR14281:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein spc25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.04c","secondary_identifiers":["UniProtKB:Q10430"],"synonyms":[{"name":"Spom972h-SPC25","type":"exact"}],"termid":"PR:Q10430"}


id: SO:0000389
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 109-nucleotide RNA of E. coli that seems to have a regulatory role on the galactose operon. Changes in Spot 42 levels are implicated in affecting DNA polymerase I levels.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spot_42_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Spot_42_RNA"],"synonyms":[{"name":"spot-42 RNA","type":"exact"}],"termid":"SO:0000389"}


id: PBO:0043972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta pseudogene 2","termid":"PBO:0043972"}


id: MONDO:1010937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphosarcoma that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porcine lymphoma","termid":"MONDO:0700198"},{"relation_name":"is_a","term_name":"lymphosarcoma, non-human animal","termid":"MONDO:1010209"},{"relation_name":"is_a","term_name":"cancer, pig","termid":"MONDO:1012572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphosarcoma, pig","secondary_identifiers":["OMIA:000615-9823"],"termid":"MONDO:1010937","xrefs":{"Monarch":{"xref_id":"1010937"}}}


id: PR:Q9HDW8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutaredoxin-related protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.02","secondary_identifiers":["UniProtKB:Q9HDW8"],"synonyms":[{"name":"Spom972h-GLRX5","type":"exact"}],"termid":"PR:Q9HDW8"}


id: GO:0048197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of priming complexes to form a coat on a Golgi membrane. Priming complexes associate laterally and additional coat proteins are recruited from the cytosol to the forming coat. Cargo proteins diffuse into the budding site and become trapped by their interactions with the coat.","definition_xrefs":["ISBN:0716731363","GOC:jid","PMID:10219233","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0016192","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"Golgi membrane coat protein complex assembly","synonyms":[{"name":"Golgi apparatus membrane coat protein complex assembly","type":"exact"},{"name":"Golgi membrane bud coat oligomerisation","type":"narrow"},{"name":"dictyosome membrane binding by cytosolic coat proteins","type":"narrow"},{"name":"dictyosome membrane bud coat oligomerisation","type":"narrow"}],"termid":"GO:0048197"}


id: FYPO:0000792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal glycerol dehydrogenase activity","termid":"FYPO:0000792"}


id: _global:has_host
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"X 'has host' y if and only if: x is an organism, y is an organism, and x can live on the surface of or within the body of y","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"_global:symbiotically_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_host","secondary_identifiers":["RO:0002454"],"termid":"_global:has_host"}


id: PR:O59816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04244","PRO:DNx","PANTHER:PTHR23151:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.07","secondary_identifiers":["UniProtKB:O59816"],"synonyms":[{"name":"PDC-E2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PDCE2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLAT","type":"exact"},{"name":"dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pyruvate dehydrogenase complex component E2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59816"}


id: MONDO:0018596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic polyarteritis nodosa (PAN) is a chronic systemic necrotizingvasculitis of adults and childrenaffecting small- and medium-sized vessels and characterized by formation of microaneurysms leading to serious generalized disease and multi-organ involvement.","definition_xrefs":["Orphanet:439762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary polyarteritis nodosa","termid":"MONDO:0018593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic polyarteritis nodosa","secondary_identifiers":["GARD:21833"],"synonyms":[{"name":"systemic PAN","type":"exact"},{"name":"systemic periarteritis nodosa","type":"exact"}],"termid":"MONDO:0018596","xrefs":{"Monarch":{"xref_id":"0018596"}}}


id: GO:0035603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands, which contributes to hemopoiesis.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in hemopoiesis","synonyms":[{"name":"FGF receptor signaling pathway involved in hematopoiesis","type":"exact"},{"name":"FGFR signaling pathway involved in hematopoiesis","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in hematopoiesis","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in hemopoiesis","type":"exact"}],"termid":"GO:0035603"}


id: PATO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process quality inhering in a bearer by virtue of the bearer's unfolding in a location with or without oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity of a process","termid":"PATO:0001457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity of a process to oxygen","synonyms":[{"name":"sensitivity of occurrent to oxygen","type":"exact"}],"termid":"PATO:0001458"}


id: PBO:0017505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stretch-activated calcium ion channel Yam8","termid":"PBO:0017505"}


id: PBO:0079892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 1","termid":"PBO:0079892"}


id: PBO:0031067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_normal_germ_tube_morphology","termid":"PBO:0031067"}


id: PBO:0049327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIE subunit 1","termid":"PBO:0049327"}


id: PBO:0079638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 9","termid":"PBO:0079638"}


id: PBO:0029708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_low_pH","termid":"PBO:0029708"}


id: GO:1990704
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi trans membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi trans cisterna membrane (obsolete GO:1990704)","synonyms":[{"name":"integral component of trans-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990704"}


id: PBO:0039209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B15","termid":"PBO:0039209"}


id: PBO:0068357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138 pseudogene 2","termid":"PBO:0068357"}


id: GO:0015112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrate ions (NO3-) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nitrate transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015112"}


id: GO:0030925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of calcium into a metallo-oxygen cluster.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium incorporation into metallo-oxygen cluster (obsolete GO:0030925)","termid":"GO:0030925"}


id: PBO:0086717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene; contains multiple predicted transmembrane domains","termid":"PBO:0086717"}


id: MONDO:0006510
data:
  {"annotated_genes":["SJAG_00516","SJAG_04335","SJAG_01183","SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[86268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"},{"annotations":[85901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013782"},{"annotations":[85364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"}]},"cv_name":"mondo","definition":"Genetic defects in the selective or non-selective transport functions of the kidney tubules.","definition_xrefs":["MESH:D015499"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null,"SJAG_03375":null,"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubular transport disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000647","DOID:447","MEDGEN:19728","UMLS:C0035091"],"synonyms":[{"name":"disorder of renal absorption","type":"exact"},{"name":"inborn renal tubular transport disorder","type":"exact"},{"name":"kidney tubular transport, inborn error","type":"related"},{"name":"kidney tubular transport, inborn errors","type":"related"},{"name":"renal absorption disease","type":"exact"},{"name":"renal tubular transport errors","type":"related"},{"name":"renal tubular transport, inborn error","type":"related"}],"termid":"MONDO:0006510","terms_by_termid":{"MONDO:0010359":null,"MONDO:0011268":null,"MONDO:0011422":null,"MONDO:0013782":null},"xrefs":{"Monarch":{"xref_id":"0006510"}}}


id: PATO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000269 relative visual threshold (obsolete PATO:0000269)","termid":"PATO:0000269"}


id: PBO:0005470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CtIP-related endonuclease","termid":"PBO:0005470"}


id: PBO:0087139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that binds specific mRNAs and interacts with She3p; part of the mRNA localization machinery that restricts accumulation of certain proteins to the bud; binds to ER-derived membranes and targets mRNAs to cortical ER","termid":"PBO:0087139"}


id: MONDO:0019125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, clinically heterogeneous, multisystemic inflammatory disease characterized by inflammation of the cartilage and proteoglycan rich structures leading to cartilage damage with joint, ocular and cardiovascular involvement.","definition_xrefs":["Orphanet:728"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"chondromalacia","termid":"MONDO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relapsing polychondritis","secondary_identifiers":["MESH:D011081","NANDO:2200428","DOID:2556","ICD10CM:M94.1","SCTID:72275000","NORD:1655","UMLS:C0032453","NANDO:2100154","EFO:1001148","MEDGEN:45995","ICD9:733.99","NCIT:C157268","GARD:7417","icd11.foundation:1412888287","NANDO:1200283","MedDRA:10038304"],"synonyms":[{"name":"chondromalacia, systemic","type":"exact"},{"name":"chronic atrophic polychondritis","type":"related"},{"name":"recurrent polychondritis","type":"related"}],"termid":"MONDO:0019125","xrefs":{"Monarch":{"xref_id":"0019125"}}}


id: GO:0004654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA(n+1) + phosphate = RNA(n) + a nucleoside diphosphate.","definition_xrefs":["EC:2.7.7.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase activity","secondary_identifiers":["RHEA:22096","MetaCyc:2.7.7.8-RXN"],"synonyms":[{"name":"nucleoside diphosphate:polynucleotidyl transferase activity","type":"related"},{"name":"polynucleotide phosphorylase activity","type":"related"},{"name":"polyribonucleotide phosphorylase activity","type":"related"},{"name":"polyribonucleotide:phosphate nucleotidyltransferase activity","type":"related"}],"termid":"GO:0004654"}


id: GO:0030769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + macrocin = S-adenosyl-L-homocysteine + H+ + tylosin.","definition_xrefs":["RHEA:17269","EC:2.1.1.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"macrocin O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02858","MetaCyc:MACROCIN-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine-macrocin O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:macrocin 3'''-O-methyltransferase activity","type":"related"},{"name":"macrocin methyltransferase activity","type":"related"}],"termid":"GO:0030769"}


id: PBO:0058857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8086","termid":"PBO:0058857"}


id: PBO:0070380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 1 pseudogene 1","termid":"PBO:0070380"}


id: GO:1902606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["PMID:23407708","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of large conductance calcium-activated potassium channel activity","synonyms":[{"name":"regulation of BK KCa channels","type":"exact"},{"name":"regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"regulation of BK channel activity","type":"related"},{"name":"regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902606"}


id: GO:0080115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin XI heavy chain.","definition_xrefs":["PMID:18703495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin tail binding","termid":"GO:0032029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"myosin XI tail binding","termid":"GO:0080115"}


id: MONDO:0021010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm of the skin arising from the lymphatic vessels.","definition_xrefs":["NCIT:C4490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangiosarcoma","termid":"MONDO:0006282"},{"relation_name":"is_a","term_name":"skin sarcoma","termid":"MONDO:0006414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin lymphangiosarcoma","secondary_identifiers":["ICD9:171.2","SCTID:62497000","UMLS:C0346082","MEDGEN:87536"],"synonyms":[{"name":"lymphangiosarcoma of Stewart and Treves","type":"exact"},{"name":"lymphangiosarcoma of skin","type":"exact"},{"name":"lymphangiosarcoma of the skin","type":"exact"},{"name":"skin lymphangiosarcoma","type":"exact"}],"termid":"MONDO:0021010","xrefs":{"Monarch":{"xref_id":"0021010"}}}


id: GO:0018528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: iminodiacetate + OH- = H+ + 2 e- + glyoxylate + glycine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete iminodiacetate dehydrogenase activity (obsolete GO:0018528)","termid":"GO:0018528"}


id: MONDO:0008081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis","termid":"MONDO:0021061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis, type IV, of Riccardi","secondary_identifiers":["OMIM:162270","UMLS:C0220695","MESH:C537392","MEDGEN:67393"],"synonyms":[{"name":"NF4","type":"related"},{"name":"Nf 4","type":"related"},{"name":"neurofibromatosis type 4","type":"exact"},{"name":"neurofibromatosis type IV","type":"exact"},{"name":"neurofibromatosis, atypical","type":"related"},{"name":"neurofibromatosis, type IV, of RICCARDI","type":"related"},{"name":"neurofibromatosis, type IV, of Riccardi","type":"exact"},{"name":"neurofibromatosis, variant form(S) of","type":"related"},{"name":"type IV neurofibromatosis of Riccardi","type":"exact"}],"termid":"MONDO:0008081","xrefs":{"Monarch":{"xref_id":"0008081"}}}


id: PBO:0038643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 11","termid":"PBO:0038643"}


id: GO:2001257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cation channel activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of cation channel activity","synonyms":[{"name":"regulation of cation diffusion facilitator activity","type":"exact"},{"name":"regulation of nonselective cation channel activity","type":"exact"}],"termid":"GO:2001257"}


id: PBO:0039506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 4","termid":"PBO:0039506"}


id: PBO:0090499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Ndc80","termid":"PBO:0090499"}


id: MONDO:0022871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum agenesis of blepharophimosis robin type","termid":"MONDO:0022871","xrefs":{"Monarch":{"xref_id":"0022871"}}}


id: GO:2000471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic stem cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"hematopoietic stem cell migration","termid":"GO:0035701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic stem cell migration","synonyms":[{"name":"regulation of hemopoietic stem cell migration","type":"exact"}],"termid":"GO:2000471"}


id: MONDO:0009117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorganization, mouse, homolog of (obsolete MONDO:0009117)","secondary_identifiers":["OMIM:223200"],"synonyms":[{"name":"Ds","type":"related"},{"name":"disorganization, mouse, homolog OF","type":"related"}],"termid":"MONDO:0009117","xrefs":{"Monarch":{"xref_id":"0009117"}}}


id: PR:O59866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04644","PANTHER:PTHR10830:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.15","secondary_identifiers":["UniProtKB:O59866"],"synonyms":[{"name":"Spom972h-DDOST","type":"exact"},{"name":"oligosaccharyl transferase 48 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59866"}


id: PBO:0002392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 regulator Dap1","termid":"PBO:0002392"}


id: GO:0034393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of smooth muscle cell apoptotic process.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle cell apoptotic process","termid":"GO:0010661"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell apoptotic process","synonyms":[{"name":"activation of smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of SMC apoptosis","type":"exact"},{"name":"positive regulation of smooth muscle cell apoptosis","type":"narrow"},{"name":"stimulation of smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"up-regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"upregulation of smooth muscle cell apoptosis","type":"exact"}],"termid":"GO:0034393"}


id: FYPO:0006657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which acid phosphatase activity is absent during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished acid phosphatase activity","termid":"FYPO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished acid phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"acid phosphatase activity abolished during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006657"}


id: GO:0004995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a tachykinin neuropeptide and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["Wikipedia:Tachykinin","GOC:ai","GOC:bf","PMID:7639617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"tachykinin receptor activity","termid":"GO:0004995"}


id: PBO:0059800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 26","termid":"PBO:0059800"}


id: GO:0019015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The whole of the genetic information of a virus, contained as either DNA or RNA.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete viral genome (obsolete GO:0019015)","termid":"GO:0019015"}


id: MONDO:0016657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"8p11.2 deletion syndrome is a contiguous gene syndrome characterized by the association of congenital spherocytosis, dysmorphic features, growth delay and hypogonadotropic hypogonadism.","definition_xrefs":["Orphanet:251066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 8","termid":"MONDO:0016890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8p11.2 deletion syndrome","secondary_identifiers":["MEDGEN:930174","GARD:20693","UMLS:C4304505","SCTID:719646006"],"synonyms":[{"name":"Del(8)(p11.2)","type":"exact"},{"name":"monosomy 8p11.2","type":"exact"}],"termid":"MONDO:0016657","xrefs":{"Monarch":{"xref_id":"0016657"}}}


id: PBO:0072966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 1, pseudogene","termid":"PBO:0072966"}


id: GO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proliferation of cells in the trophectoderm.","definition_xrefs":["ISBN:0124020607","GOC:dph","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"blastocyst growth","termid":"GO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell proliferation","synonyms":[{"name":"trophectoderm cell proliferation","type":"exact"}],"termid":"GO:0001834"}


id: GO:0085040
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The space between the symbiont plasma membrane and the extra-invasive hyphal membrane.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete extra-invasive hyphal space (obsolete GO:0085040)","termid":"GO:0085040"}


id: PBO:0083839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily-conserved Hsp90 cochaperone; regulates spatial organization of amyloid-like proteins in the cytosol, thereby buffering the proteotoxicity caused by amyloid-like proteins; interacts with the Ssa group of the cytosolic Hsp70 chaperones and activates Ssa1p ATPase activity; interacts with Hsp90 chaperones and inhibits their ATPase activity; homolog of mammalian Hop","termid":"PBO:0083839"}


id: GO:0070467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III, DNA polymerase epsilon, a 5'-3' exonuclease, and the SMC1 and SMC2 proteins, and is involved in recombinational repair of deletions and gaps in DNA.","definition_xrefs":["PMID:8392064","PMID:8670910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"RC-1 DNA recombination complex","synonyms":[{"name":"DNA recombination complex RC-1","type":"exact"},{"name":"RC-1 complex (recombination complex 1)","type":"exact"}],"termid":"GO:0070467"}


id: MONDO:0011036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porencephaly-cerebellar hypoplasia-internal malformations syndrome is rare central nervous system malformation syndrome characterized by bilateral porencephaly, absence of the septum pellucidum and cerebellar hypoplasia with absent vermis. Additionally, dysmorphic facial features (hypertelorism, epicanthic folds, high arched palate, prominent metopic suture), macrocephaly, corneal clouding, situs inversus, tetralogy of Fallot, atrial septal defects and/or seizures have been observed.","definition_xrefs":["Orphanet:2941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porencephaly-cerebellar hypoplasia-internal malformations syndrome","secondary_identifiers":["MEDGEN:331296","OMIM:601322","UMLS:C1832472","SCTID:763821001","GARD:4437","MESH:C536336"],"synonyms":[{"name":"Bonnemann Meinecke syndrome","type":"related"},{"name":"Bonnemann-Meinecke syndrome","type":"exact"},{"name":"porencephaly cerebellar hypoplasia internal malformations","type":"related"},{"name":"porencephaly, cerebellar hypoplasia, and internal malformations","type":"related"}],"termid":"MONDO:0011036","xrefs":{"Monarch":{"xref_id":"0011036"}}}


id: MONDO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schistosoma mansoni infection, susceptibility (obsolete MONDO:0000093)","termid":"MONDO:0000093","xrefs":{"Monarch":{"xref_id":"0000093"}}}


id: MONDO:0017307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of phenylalanine and tyrosine metabolism","termid":"MONDO:0019235"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"disorder of tyrosine metabolism","secondary_identifiers":["UMLS:C0268482","ICD9:270.2","GARD:21127","icd11.foundation:1842978338","MEDGEN:541330","Orphanet:284818","SCTID:37200009"],"termid":"MONDO:0017307","xrefs":{"Monarch":{"xref_id":"0017307"}}}


id: MONDO:0008651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral hypoplasia with lumbar kyphosis","secondary_identifiers":["UMLS:C1860463","MESH:C566002","MEDGEN:348622","OMIM:192900"],"synonyms":[{"name":"vertebral hypoplasia with lumbar kyphosis","type":"exact"}],"termid":"MONDO:0008651","xrefs":{"Monarch":{"xref_id":"0008651"}}}


id: GO:0038059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex containing two IkappaB kinase (IKK) alpha subunits.","definition_xrefs":["PMID:21173796","PMID:18626576","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IKKalpha-IKKalpha complex","synonyms":[{"name":"IKKalpha homodimer","type":"exact"},{"name":"IKKalpha homodimeric complex","type":"exact"},{"name":"IKKalpha-IKKalpha protein complex","type":"exact"},{"name":"IkappaB kinase alpha homodimer","type":"exact"},{"name":"IkappaB kinase-alpha homodimer","type":"exact"}],"termid":"GO:0038059"}


id: PBO:0034438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_bleomycin","termid":"PBO:0034438"}


id: PBO:0003840
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.85","termid":"PBO:0003840"}


id: PBO:0029143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_kinase_activity","termid":"PBO:0029143"}


id: GO:1902611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a N-phenylthiourea stimulus.","definition_xrefs":["PMID:24006265","GO_REF:0000071","GOC:TermGenie","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to N-phenylthiourea","termid":"GO:1902610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-phenylthiourea","termid":"GO:1902611"}


id: GO:0033687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of osteoblasts, resulting in the expansion of an osteoblast cell population. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast proliferation","termid":"GO:0033687"}


id: GO:0106129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","PMID:23447642","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"positively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of store-operated calcium entry","termid":"GO:0106129"}


id: PBO:0061212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 4 like","termid":"PBO:0061212"}


id: MONDO:0013524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bleeding diathesis due to thromboxane synthesis deficiency (obsolete MONDO:0013524)","termid":"MONDO:0013524","xrefs":{"Monarch":{"xref_id":"0013524"}}}


id: PBO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1 (predicted)","termid":"PBO:0033828"}


id: GO:0019074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The packaging of viral RNA (single-stranded or double-stranded) into a nucleocapsid.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome packaging","termid":"GO:0019072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome packaging","termid":"GO:0019074"}


id: PBO:0028104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_galactose_carbon_source","termid":"PBO:0028104"}


id: GO:1900635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heptadecane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heptadecane metabolic process","synonyms":[{"name":"heptadecane metabolism","type":"exact"}],"termid":"GO:1900635"}


id: PBO:0076907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin","termid":"PBO:0076907"}


id: GO:0071509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in conjugation with cellular fusion (obsolete GO:0071509)","synonyms":[{"name":"activation of MAP kinase kinase activity during conjugation with cellular fusion","type":"exact"},{"name":"activation of MAPKK activity involved in mating response","type":"related"},{"name":"conjugation with cellular fusion, activation of MAP kinase kinase activity","type":"exact"},{"name":"conjugation with cellular fusion, activation of MAPKK activity","type":"exact"}],"termid":"GO:0071509"}


id: PBO:0061633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 15 pseudogene 1","termid":"PBO:0061633"}


id: GO:0008363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based larval cuticle. The insect larval cuticle is a secretion from epidermal cells that is shed at each molt. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development involved in chitin-based cuticle molting cycle","termid":"GO:0042337"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval chitin-based cuticle development","synonyms":[{"name":"larval cuticle anabolism","type":"broad"},{"name":"larval cuticle biosynthetic process","type":"broad"},{"name":"larval cuticle formation","type":"broad"},{"name":"larval cuticle synthesis","type":"broad"}],"termid":"GO:0008363"}


id: MONDO:0013193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any thyrotoxic periodic paralysis in which the cause of the disease is a mutation in the KCNJ18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thyrotoxic periodic paralysis","termid":"MONDO:0019201"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotoxic periodic paralysis, susceptibility to, 2","secondary_identifiers":["UMLS:C2750473","MEDGEN:413851","OMIM:613239"],"synonyms":[{"name":"KCNJ18 thyrotoxic periodic paralysis","type":"exact"},{"name":"TTPP2","type":"related"},{"name":"thyrotoxic periodic paralysis caused by mutation in KCNJ18","type":"exact"},{"name":"thyrotoxic periodic paralysis, susceptibility to, 2","type":"exact"},{"name":"thyrotoxic periodic paralysis, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013193","xrefs":{"Monarch":{"xref_id":"0013193"}}}


id: GO:0046877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of saliva from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"saliva secretion","termid":"GO:0046541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of saliva secretion","termid":"GO:0046877"}


id: PBO:0047029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 91 member A4, pseudogene","termid":"PBO:0047029"}


id: GO:0015413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ni2+(out) = ADP + phosphate + Ni2+(in).","definition_xrefs":["RHEA:15557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transporter activity","termid":"GO:0015099"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type nickel transporter activity","secondary_identifiers":["EC:7.2.2.11","GO:0102016","MetaCyc:ABC-20-RXN"],"synonyms":[{"name":"ATP-dependent nickel transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled nickel transmembrane transporter activity","type":"related"},{"name":"nickel ABC transporter","type":"exact"},{"name":"nickel ABC transporter activity","type":"exact"},{"name":"nickel porter activity","type":"related"},{"name":"nickel transporting ATPase activity","type":"related"},{"name":"nickel-transporting ATPase activity","type":"related"}],"termid":"GO:0015413"}


id: MOD:00920
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-valine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-valine residue","synonyms":[{"name":"ModVal","type":"exact"}],"termid":"MOD:00920"}


id: GO:0048332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesoderm morphogenesis","termid":"GO:0048332"}


id: PBO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae PN uptake is mediated by the unrelated transporter Tpn1p","termid":"PBO:0002112"}


id: PBO:0028159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5.8S_rRNA_level","termid":"PBO:0028159"}


id: PBO:0086879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; contains a Zn(II)2Cys6 zinc finger domain characteristic of DNA-binding proteins; computational analysis suggests a role in regulation of expression of genes encoding transporters; binds Sin3p in a two-hybrid assay;","termid":"PBO:0086879"}


id: GO:0036521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of protein localisation to the host phagosome. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:25063865"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host protein localization to phagocytic vesicle (obsolete GO:0036521)","synonyms":[{"name":"modulation by symbiont of host protein localisation to phagosome","type":"related"}],"termid":"GO:0036521"}


id: GO:0006766
data:
  {"annotated_genes":["SJAG_00265","SJAG_01881","SJAG_01126","SJAG_04711","SJAG_02421","SJAG_01935","SJAG_04845","SJAG_00827","SJAG_02408","SJAG_00283","SJAG_03632","SJAG_04156","SJAG_00673","SJAG_00815","SJAG_02225","SJAG_04481","SJAG_02491","SJAG_02360","SJAG_04282","SJAG_00381","SJAG_01425","SJAG_04866","SJAG_00691","SJAG_01742","SJAG_03679","SJAG_02047","SJAG_05200","SJAG_04067","SJAG_05230","SJAG_00491","SJAG_00043","SJAG_03275","SJAG_00252","SJAG_01139","SJAG_00480","SJAG_01383","SJAG_00707","SJAG_01054","SJAG_03538","SJAG_00106","SJAG_01198","SJAG_00376","SJAG_03362","SJAG_02420","SJAG_01970","SJAG_02406","SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100650],"is_not":false,"summary":null,"term":"GO:0006766"},{"annotations":[92018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[116181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[75439,113233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[103956,104103,107497,111549,112808,105241,89508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[113190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[99800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"},{"annotations":[97931,97935,88101,101936,112503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[88246,112813],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[98882,114830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[100056,113523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[63618,86936,94690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[110969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[86937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[86938,94691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[92019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[105943,86687,113910,116301,100333,114864,106136,109523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[98717,112720,113139,115154,112726,106536,93491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[112727,113140,98718,112721,93492,115155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[58812,65574,98719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[109591,109592,98720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[100057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[98218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamins. Vitamin is a general term for a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body. Vitamins may be water-soluble or fat-soluble and usually serve as components of coenzyme systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00252":null,"SJAG_00265":null,"SJAG_00283":null,"SJAG_00376":null,"SJAG_00381":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00815":null,"SJAG_00827":null,"SJAG_01054":null,"SJAG_01126":null,"SJAG_01139":null,"SJAG_01198":null,"SJAG_01383":null,"SJAG_01425":null,"SJAG_01543":null,"SJAG_01742":null,"SJAG_01881":null,"SJAG_01935":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02225":null,"SJAG_02360":null,"SJAG_02406":null,"SJAG_02408":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02491":null,"SJAG_03275":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04067":null,"SJAG_04156":null,"SJAG_04282":null,"SJAG_04481":null,"SJAG_04711":null,"SJAG_04845":null,"SJAG_04866":null,"SJAG_05200":null,"SJAG_05230":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"vitamin metabolism","type":"exact"}],"termid":"GO:0006766","terms_by_termid":{"GO:0006766":null,"GO:0006769":null,"GO:0006772":null,"GO:0008614":null,"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042816":null,"GO:0042818":null,"GO:0042820":null,"GO:0042821":null,"GO:0042823":null,"GO:0046655":null,"GO:0046656":null,"GO:0090180":null,"GO:1990181":null}}


id: GO:1903706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemopoiesis.","definition_xrefs":["GOC:TermGenie","GOC:pad","PMID:20080761","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemopoiesis","synonyms":[{"name":"regulation of blood cell biosynthesis","type":"exact"},{"name":"regulation of blood cell formation","type":"exact"},{"name":"regulation of haemopoiesis","type":"exact"},{"name":"regulation of hematopoiesis","type":"exact"}],"termid":"GO:1903706"}


id: GO:0071452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a singlet oxygen stimulus. Singlet oxygen is a dioxygen (O2) molecule in which two 2p electrons have similar spin. Singlet oxygen is more highly reactive than the form in which these electrons are of opposite spin, and it is produced in mutant chloroplasts lacking carotenoids and by leukocytes during metabolic burst.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to singlet oxygen","termid":"GO:0000304"},{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to singlet oxygen","termid":"GO:0071452"}


id: FYPO:0000904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization or depolymerization, by the addition or removal of tubulin dimers respectively, occurs to a lesser extent than normal. Microtubules are thus less dynamic than normal.","definition_xrefs":["PomBase:mah","GO:0031109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"decreased microtubule polymerization or depolymerization","synonyms":[{"name":"decreased microtubule dynamicity","type":"related"},{"name":"decreased microtubule growth or shrinkage","type":"related"},{"name":"decreased microtubule polymerisation or depolymerisation","type":"exact"},{"name":"decreased microtubule polymerization or depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule polymerization or depolymerization during vegetative growth","type":"exact"},{"name":"reduced microtubule polymerization or depolymerization","type":"exact"}],"termid":"FYPO:0000904"}


id: MONDO:0011837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital vitamin K-dependent coagulation factors combined deficiency in which the cause of the disease is a mutation in the VKORC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vitamin K-dependent coagulation factors deficiency","termid":"MONDO:0015722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"vitamin K-dependent clotting factors, combined deficiency of, type 2","secondary_identifiers":["OMIM:607473","DOID:0112174","UMLS:C1843832","GARD:18196","MEDGEN:334505","MESH:C564393"],"synonyms":[{"name":"VKCFD2","type":"related"},{"name":"VKORC1 congenital vitamin K-dependent coagulation factors combined deficiency","type":"exact"},{"name":"congenital vitamin K-dependent coagulation factors combined deficiency caused by mutation in VKORC1","type":"exact"},{"name":"vitamin K-dependent clotting factors, combined deficiency of, 2","type":"exact"},{"name":"vitamin K-dependent clotting factors, combined deficiency of, type 2","type":"exact"}],"termid":"MONDO:0011837","xrefs":{"Monarch":{"xref_id":"0011837"}}}


id: MONDO:0019720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A renal or urinary tract malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital anomaly of kidney and urinary tract","termid":"MONDO:0019719"}],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic renal or urinary tract malformation (obsolete MONDO:0019720)","secondary_identifiers":["Orphanet:93546"],"synonyms":[{"name":"isolated congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"isolated renal or urinary tract malformation","type":"related"},{"name":"nonsyndromic congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"nonsyndromic renal or urinary tract malformation","type":"exact"}],"termid":"MONDO:0019720","xrefs":{"Monarch":{"xref_id":"0019720"}}}


id: PBO:0054508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1908","termid":"PBO:0054508"}


id: GO:0097737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A maturation process by which an organism acquires the ability to reproduce. In fungi, reproductive competence only occurs in a population of filamentous cells that form a mycelium.","definition_xrefs":["GOC:di","PMID:23864594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of mycelium reproductive competence","synonyms":[{"name":"mycelium developmental competence","type":"related"}],"termid":"GO:0097737"}


id: MONDO:0013741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy that has material basis in heterozygous mutation in the CPA6 gene on chromosome 8q13.","definition_xrefs":["PMID:21922598","DOID:0060752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 5","secondary_identifiers":["UMLS:C3280730","GARD:18280","MEDGEN:482360","OMIM:614417"],"synonyms":[{"name":"ETL5","type":"exact"},{"name":"epilepsy, familial temporal lobe, 5","type":"related"},{"name":"epilepsy, familial temporal lobe, type 5","type":"exact"},{"name":"familial temporal lobe epilepsy type 5","type":"exact"}],"termid":"MONDO:0013741","xrefs":{"Monarch":{"xref_id":"0013741"}}}


id: MONDO:0018555
data:
  {"annotated_genes":["SJAG_00301","SJAG_04398","SJAG_02829","SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[86090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[84723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[84432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[85923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","definition":"Abnormal ovarian or testicular function due to insufficient hormonal stimulation from the hypothalamic-pituitary axis.","definition_xrefs":["NCIT:C113347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism","termid":"MONDO:0002146"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_02829":null,"SJAG_04110":null,"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200388","Orphanet:432","GARD:16533","ICD10CM:E23.0","HP:0000044","DOID:7455","DOID:0090070","MEDGEN:82883","NANDO:2100138","OMIMPS:147950","NANDO:2200382","UMLS:C0271623","SCTID:33927004","ICD9:253.4"],"synonyms":[{"name":"Normosmic idiopathic hypogonadotropic hypogonadism","type":"exact"},{"name":"central hypogonadism","type":"exact"},{"name":"congenital idiopathic hypogonadotropic hypogonadism","type":"narrow"},{"name":"gonadotropic deficiency","type":"exact"},{"name":"hypogonadism, hypogonadotropic","type":"exact"},{"name":"hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism with or without anosmia","type":"exact"},{"name":"hypogonadotropism","type":"related"},{"name":"isolated congenital gonadotropin deficiency","type":"narrow"},{"name":"isolated hypogonadotropic hypogonadism","type":"related"},{"name":"low gonadotropins (secondary hypogonadism)","type":"exact"},{"name":"nIHH","type":"exact"},{"name":"normosmic congenital hypogonadotropic hypogonadism","type":"exact"},{"name":"secondary hypogonadism","type":"exact"}],"termid":"MONDO:0018555","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0014497":null},"xrefs":{"Monarch":{"xref_id":"0018555"}}}


id: GO:0098714
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100839],"is_not":false,"summary":null,"term":"GO:0098714"}]},"cv_name":"biological_process","definition":"The directed movement of malate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transport","termid":"GO:0071423"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"malate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097405"],"synonyms":[{"name":"malate import into cell","type":"exact"}],"termid":"GO:0098714","terms_by_termid":{"GO:0098714":null}}


id: PBO:0057208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376b","termid":"PBO:0057208"}


id: GO:0071770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components, including (phenyl)phthiocerol, phthiodiolone, phthiotriol dimycocerosate and diphthioceranate, to form the DIM/DIP layer of the Actinobacterium-type cell wall.","definition_xrefs":["GOC:mah","PMID:15653820","PMID:3149973","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Actinobacterium-type cell wall biogenesis","termid":"GO:0071766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"DIM/DIP cell wall layer assembly","synonyms":[{"name":"DIM cell wall layer assembly","type":"exact"},{"name":"DIM/DIP cell wall layer biogenesis","type":"related"},{"name":"PDIM cell wall layer assembly","type":"exact"}],"termid":"GO:0071770"}


id: PBO:0026962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_stress_responsive_gene_mRNA_during_cellular_response_to_phosphate_starvation","termid":"PBO:0026962"}


id: GO:0048199
data:
  {"annotated_genes":["SJAG_03268","SJAG_04391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116871,92425],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport to, from or within the Golgi apparatus; mediated by the addition of specific coat proteins, including COPI and COPII proteins and clathrin, to the membrane during vesicle formation.","definition_xrefs":["GOC:mah","ISBN:0716731363","PMID:10219233","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle targeting, to, from or within Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle targeting","type":"exact"},{"name":"dictyosome vesicle targeting","type":"narrow"},{"name":"vesicle targeting, to, from or within dictyosome","type":"narrow"}],"termid":"GO:0048199","terms_by_termid":{"GO:0048205":null}}


id: GO:0061394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (obsolete GO:0061394)","termid":"GO:0061394"}


id: PBO:0052882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-4","termid":"PBO:0052882"}


id: MONDO:0012510
data:
  {"annotated_genes":["SJAG_02324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85208],"is_not":false,"summary":null,"term":"MONDO:0012510"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 2 is a rare mitochondrial disorder due to a defect in mitochondrial protein synthesis characterized by severe intrauterine growth retardation, neonatal limb edema and redundant skin on the neck (hydrops), developmental brain defects (corpus callosum agenesis, ventriculomegaly), brachydactyly, dysmorphic facial features with low set ears, severe intractable neonatal lactic acidosis with lethargy, hypotonia, absent spontaneous movements and fatal outcome. Markedly decreased activity of complex I, II + III and IV in muscle and liver have been determined.","definition_xrefs":["Orphanet:254920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17232","MEDGEN:400626","DOID:0111483","MESH:C566468","OMIM:610498","SCTID:764943000","UMLS:C1864843"],"synonyms":[{"name":"COXPD2","type":"exact"},{"name":"MRPS16 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 2","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MRPS16","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 2","type":"exact"},{"name":"corpus callosum, agenesis of, with Dysmorphism and fatal lactic acidosis","type":"related"}],"termid":"MONDO:0012510","terms_by_termid":{"MONDO:0012510":null},"xrefs":{"Monarch":{"xref_id":"0012510"}}}


id: MONDO:0005754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A generalized tonic-clonic seizure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adolescence-adult electroclinical syndrome","termid":"MONDO:0000415"},{"relation_name":"is_a","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"adolescent/adult-onset epilepsy syndrome","termid":"MONDO:0100030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy with generalized tonic-clonic seizures","secondary_identifiers":["NCIT:C3022","SCTID:352818000","DOID:7725","MESH:D004830","EFO:0007262","MEDGEN:4987","ICD9:345.10","UMLS:C0014549"],"synonyms":[{"name":"epileptic seizures, tonic-clonic","type":"exact"},{"name":"grand Mal epilepsy","type":"exact"},{"name":"tonic-clonic epilepsy","type":"exact"}],"termid":"MONDO:0005754","xrefs":{"Monarch":{"xref_id":"0005754"}}}


id: GO:0010794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dolichol biosynthesis. Dolichol biosynthesis consists of the chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"dolichol biosynthetic process","termid":"GO:0019408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of dolichol biosynthetic process","termid":"GO:0010794"}


id: FYECO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a MAP kinase inhibitor was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MAP kinase inhibitor","synonyms":[{"name":"SP600125","type":"narrow"},{"name":"respiratory chain inhibitor","type":"related"}],"termid":"FYECO:0000452"}


id: GO:0005588
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type V alpha chains; [alpha1(V)]2alpha2(V) and alpha1(V)alpha2(V)alpha3(V) trimers have been observed; type V collagen triple helices associate to form fibrils.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type V trimer","termid":"GO:0005588"}


id: PBO:0088714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter family","termid":"PBO:0088714"}


id: FYPO:0006499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which disassembly of the cell wall at the site of cell-cell fusion during mating is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cell wall organization","termid":"FYPO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0004805","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"abnormal cell wall disassembly at cell fusion site","synonyms":[{"name":"abnormal cell wall disassembly at cell fusion site during conjugation with cellular fusion","type":"exact"},{"name":"abnormal cell wall disassembly at cell fusion site during mating","type":"exact"},{"name":"abnormal cell wall disassembly at cell-cell fusion focus","type":"exact"},{"name":"abnormal cell wall disassembly at cell-cell fusion site","type":"exact"},{"name":"abnormal cell wall disassembly during mating","type":"exact"},{"name":"abnormal fungal-type cell wall disassembly at cell fusion site","type":"exact"},{"name":"abnormal fungal-type cell wall disassembly involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0006499"}


id: MONDO:0029138
data:
  {"annotated_genes":["SJAG_02316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85591],"is_not":false,"summary":null,"term":"MONDO:0029138"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 67","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112203","MEDGEN:1648285","OMIM:618141","UMLS:C4748341","GARD:16295"],"synonyms":[{"name":"DEE67","type":"exact"},{"name":"EIEE67","type":"exact"},{"name":"developmental and epileptic encephalopathy 67","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 67","type":"exact"}],"termid":"MONDO:0029138","terms_by_termid":{"MONDO:0029138":null},"xrefs":{"Monarch":{"xref_id":"0029138"}}}


id: GO:2000596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of optic nerve formation","termid":"GO:2000595"},{"relation_name":"negatively_regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of optic nerve formation","synonyms":[{"name":"negative regulation of CN II biosynthesis","type":"related"},{"name":"negative regulation of CN II formation","type":"related"}],"termid":"GO:2000596"}


id: PBO:0111868
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZZ type","termid":"PBO:0111868"}


id: FYPO:0007722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleosome-dependent ATPase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome-dependent ATPase activity","termid":"FYPO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased nucleosome-dependent ATPase activity","synonyms":[{"name":"reduced nucleosome-dependent ATPase activity","type":"exact"}],"termid":"FYPO:0007722"}


id: PATO:0001553
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of occurrent to oxygen which is higher than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"aerobic (for occurrence)","termid":"PATO:0001459"},{"relation_name":"is_a","term_name":"increased sensitivity of a process","termid":"PATO:0001551"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity of a process to oxygen","synonyms":[{"name":"high sensitivity of occurrent to oxygen","type":"exact"}],"termid":"PATO:0001553"}


id: PBO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 family regulatory subunit (predicted)","termid":"PBO:0004111"}


id: MONDO:0009399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperphosphatemia, polyuria, and seizures","secondary_identifiers":["MEDGEN:343444","UMLS:C1855922","OMIM:239350","MESH:C565494"],"synonyms":[{"name":"hyperphosphatemia, polyuria, and seizures","type":"exact"}],"termid":"MONDO:0009399","xrefs":{"Monarch":{"xref_id":"0009399"}}}


id: GO:0140806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartyl-[protein] + NAD+ = 4-O-(ADP-D-ribosyl)-L-aspartyl-[protein] + nicotinamide.","definition_xrefs":["PMID:19764761","PMID:25043379","RHEA:54424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016757","GO:0140096","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NAD+-protein-aspartate ADP-ribosyltransferase activity","termid":"GO:0140806"}


id: MONDO:0700197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukemia that occurs in a pig.","definition_xrefs":["NCIT:C141365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"leukemia, non-human animal","termid":"MONDO:0700100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcine leukemia","termid":"MONDO:0700197","xrefs":{"Monarch":{"xref_id":"0700197"}}}


id: PBO:0079133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymic stromal lymphopoietin","termid":"PBO:0079133"}


id: _global:symbiotically_interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A biotic interaction in which the two organisms live together in more or less intimate association.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"_global:participates_in_a_biotic-biotic_interaction_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiotically_interacts_with","secondary_identifiers":["RO:0002440"],"termid":"_global:symbiotically_interacts_with"}


id: PBO:0067121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 166, pseudogene","termid":"PBO:0067121"}


id: PBO:0080424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 8","termid":"PBO:0080424"}


id: MONDO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the cardiovascular system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of cardiovascular system","secondary_identifiers":["DOID:0060051"],"synonyms":[{"name":"cardiovascular system autoimmune disease","type":"exact"},{"name":"cardiovascular system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000603","xrefs":{"Monarch":{"xref_id":"0000603"}}}


id: FYPO:0008152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of transcribed  cryptic unstable trancripts (CUTs) measured in a cell is  normal  (i.e. indistinguishable from wild type).  Total CUT RNA or a CUT transcribed from a specific locus may be affected.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal CUT RNA level","termid":"FYPO:0008152"}


id: GO:0140033
data:
  {"annotated_genes":["SJAG_02625","SJAG_00591","SJAG_02701","SJAG_02500","SJAG_00837","SJAG_05252"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79244,78044,70090,74593,78093,76283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070577"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon acetylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02500":null,"SJAG_02625":null,"SJAG_02701":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"acetylation-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0140033","terms_by_termid":{"GO:0070577":null}}


id: PBO:0079130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase substrate","termid":"PBO:0079130"}


id: GO:0018404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Heparan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.","definition_xrefs":["RESID:AA0210"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-heparan sulfate linkage via heparan sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine (obsolete GO:0018404)","synonyms":[{"name":"protein-heparan sulphate linkage via heparan sulphate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"}],"termid":"GO:0018404"}


id: PR:O14133
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arginyl-tRNA--protein transferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21367:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl-tRNA--protein transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.07c","secondary_identifiers":["UniProtKB:O14133"],"synonyms":[{"name":"R-transferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATE1","type":"exact"},{"name":"arginine-tRNA--protein transferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"arginyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14133"}


id: MONDO:0700161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gastrointestinal stromal tumor occurring in a dog.","definition_xrefs":["NCIT:C158783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"gastrointestinal stromal tumour, non-human animal","termid":"MONDO:1011440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine gastrointestinal stromal tumor","secondary_identifiers":["OMIA:001516-9615"],"termid":"MONDO:0700161","xrefs":{"Monarch":{"xref_id":"0700161"}}}


id: PBO:0017502
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of TYrosine phosphatase","termid":"PBO:0017502"}


id: PBO:0045151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAH8 antisense RNA 1","termid":"PBO:0045151"}


id: FYPO:0006141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"},{"relation_name":"is_a","term_name":"decreased cell population growth on gluconate carbon source","termid":"FYPO:0001830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"abolished cell population growth on gluconate carbon source","synonyms":[{"name":"abolished gluconate utilization","type":"related"},{"name":"abolished growth on gluconate carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on gluconate carbon source","type":"exact"},{"name":"cell population growth on gluconate carbon source abolished","type":"exact"}],"termid":"FYPO:0006141"}


id: PR:O75011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CaM kinase-like vesicle-associated protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase nak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17F3.02","secondary_identifiers":["UniProtKB:O75011"],"synonyms":[{"name":"N-rich kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CAMKV","type":"exact"}],"termid":"PR:O75011"}


id: GO:0019146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose 5-phosphate = D-ribulose 5-phosphate + 2 H+.","definition_xrefs":["EC:5.3.1.13","RHEA:23104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arabinose-5-phosphate isomerase activity","secondary_identifiers":["MetaCyc:DARAB5PISOM-RXN","KEGG_REACTION:R01530"],"synonyms":[{"name":"D-arabinose-5-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-arabinose-5-phosphate ketol-isomerase activity","type":"related"},{"name":"arabinose phosphate isomerase activity","type":"related"},{"name":"phosphoarabinoisomerase activity","type":"related"}],"termid":"GO:0019146"}


id: GO:0070985
data:
  {"annotated_genes":["SJAG_04614","SJAG_00150","SJAG_03618"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105201,111222,112100],"is_not":false,"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that forms part of the holo TFIIH complex. In Saccharomyces/human, TFIIK contains Ccl1p/Cyclin H, Tfb3p/MAT1 and Kin28p/CDK7.","definition_xrefs":["PMID:22572993","GOC:mah","PMID:19818408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"transcription factor TFIIH holo complex","termid":"GO:0005675"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_03618":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFIIK complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mcs6/Mcs2/Pmh1 complex","type":"narrow"},{"name":"TFIIK complex","type":"exact"},{"name":"cyclin H-CDK7 complex","type":"related"}],"termid":"GO:0070985","terms_by_termid":{"GO:0070985":null}}


id: GO:0099103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Direct interaction with a channel (binding or modification), resulting in its opening. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"},{"relation_name":"is_a","term_name":"transporter activator activity","termid":"GO:0141109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"channel activator activity","synonyms":[{"name":"channel gating activity","type":"exact"}],"termid":"GO:0099103"}


id: MONDO:0019181
data:
  {"annotated_genes":["SJAG_02238","SJAG_01269","SJAG_02422","SJAG_03909","SJAG_01412","SJAG_04616","SJAG_05326","SJAG_00786","SJAG_01047","SJAG_00845","SJAG_03471","SJAG_02878","SJAG_04022"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010659"},{"annotations":[85135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026723"},{"annotations":[85255,85256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958200"},{"annotations":[84539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010497"},{"annotations":[85151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0049222"},{"annotations":[86130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010447"},{"annotations":[86269,86270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010361"},{"annotations":[86115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010451"},{"annotations":[85430,85429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010313"},{"annotations":[84273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010660"}]},"cv_name":"mondo","definition":"Nonspecific X-linked intellectual deficiencies (MRX) belong to the family of sex-linked intellectual deficiencies (XLMR). In contrast to syndromic or specific X-linked intellectual deficiencies (MRXS), which also present with associated physical, neurological and/or psychiatric manifestations, intellectual deficiency is the only symptom of MRX.","definition_xrefs":["Orphanet:777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic intellectual disability","termid":"MONDO:0000509"},{"relation_name":"is_a","term_name":"X-linked intellectual disability","termid":"MONDO:0100284"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00786":null,"SJAG_00845":null,"SJAG_01047":null,"SJAG_01269":null,"SJAG_01412":null,"SJAG_02238":null,"SJAG_02422":null,"SJAG_02878":null,"SJAG_03471":null,"SJAG_03909":null,"SJAG_04022":null,"SJAG_04616":null,"SJAG_05326":null},"genotype_count":0,"is_obsolete":false,"name":"non-syndromic X-linked intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:502019","DOID:0050776","MESH:C564490","GARD:18640","OMIMPS:309530","UMLS:C3501611"],"synonyms":[{"name":"X-linked non-specific intellectual disability","type":"exact"},{"name":"X-linked non-syndromic intellectual disability","type":"exact"},{"name":"intellectual disability, X-linked, nonsyndromic","type":"exact"},{"name":"intellectual disability, nonsyndromic, X-linked","type":"exact"},{"name":"isolated X-linked intellectual disability","type":"related"},{"name":"mental retardation, X-linked, nonsyndromic","type":"exact"},{"name":"mental retardation, nonsyndromic, X-linked","type":"exact"},{"name":"non-specific X-linked intellectual disability","type":"exact"},{"name":"non-specific X-linked mental retardation","type":"exact"},{"name":"non-syndromic X-linked intellectual disability","type":"exact"},{"name":"non-syndromic intellectual disability, X-linked","type":"exact"},{"name":"nonsyndromic X-linked intellectual disability","type":"exact"}],"termid":"MONDO:0019181","terms_by_termid":{"MONDO:0010313":null,"MONDO:0010361":null,"MONDO:0010447":null,"MONDO:0010451":null,"MONDO:0010497":null,"MONDO:0010659":null,"MONDO:0010660":null,"MONDO:0026723":null,"MONDO:0049222":null,"MONDO:0958200":null},"xrefs":{"Monarch":{"xref_id":"0019181"}}}


id: PBO:0075126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF related kinase","termid":"PBO:0075126"}


id: PBO:0056667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 5","termid":"PBO:0056667"}


id: PBO:0038279
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_file","termid":"PBO:0038279"}


id: PBO:0042855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 69","termid":"PBO:0042855"}


id: PBO:0090125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase (predicted)","termid":"PBO:0090125"}


id: PBO:0074187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 8","termid":"PBO:0074187"}


id: GO:0005505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with a heavy metal, a metal that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:mah","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal binding (obsolete GO:0005505)","synonyms":[{"name":"heavy metal binding","type":"exact"}],"termid":"GO:0005505"}


id: GO:0002927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involved in the biosynthesis of archaeosine, an archaea-specific modified base found at position 15 in the D-loop of certain archaeal tRNAs.","definition_xrefs":["GOC:hjd","PMID:20129918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"archaeosine-tRNA biosynthetic process","termid":"GO:0002927"}


id: PBO:0060545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 5","termid":"PBO:0060545"}


id: GO:0007006
data:
  {"annotated_genes":["SJAG_01780","SJAG_03502","SJAG_01305","SJAG_02398","SJAG_00569","SJAG_01470","SJAG_02524","SJAG_03563","SJAG_02501","SJAG_03416","SJAG_03710","SJAG_02002","SJAG_01120","SJAG_01951","SJAG_02028","SJAG_03633","SJAG_04317","SJAG_03282","SJAG_00168","SJAG_05268","SJAG_03168","SJAG_04237","SJAG_00404","SJAG_01917","SJAG_02034","SJAG_00576","SJAG_05302","SJAG_04996","SJAG_02656","SJAG_03700","SJAG_05241","SJAG_03515","SJAG_00687","SJAG_02361","SJAG_00230","SJAG_01949","SJAG_04208","SJAG_04965","SJAG_01640","SJAG_04370","SJAG_05300","SJAG_01405","SJAG_06440","SJAG_02355","SJAG_02797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92240,95817,100469,101398,103562,105009,105370,106680,106806,108660,112153,116978],"is_not":false,"summary":null,"term":"GO:0007006"},{"annotations":[106477,88701,113772,116914,100887,109172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042407"},{"annotations":[99447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007007"},{"annotations":[104066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990627"},{"annotations":[90110,109552],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070096"},{"annotations":[99711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007008"},{"annotations":[89599,91985,87868,106726,98621,106748,112329,115403,106669,106453,102102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[100101,112480,113829,88010,98204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[113830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051204"},{"annotations":[109197,106727,97782,109543,90112,97431,110935,89578,109553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrial membrane, either of the lipid bilayer surrounding a mitochondrion.","definition_xrefs":["GOC:ai","GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00230":null,"SJAG_00404":null,"SJAG_00569":null,"SJAG_00576":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01305":null,"SJAG_01405":null,"SJAG_01470":null,"SJAG_01640":null,"SJAG_01780":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02002":null,"SJAG_02028":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02398":null,"SJAG_02501":null,"SJAG_02524":null,"SJAG_02656":null,"SJAG_02797":null,"SJAG_03168":null,"SJAG_03282":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03563":null,"SJAG_03633":null,"SJAG_03700":null,"SJAG_03710":null,"SJAG_04208":null,"SJAG_04237":null,"SJAG_04317":null,"SJAG_04370":null,"SJAG_04965":null,"SJAG_04996":null,"SJAG_05241":null,"SJAG_05268":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial membrane organisation","type":"exact"},{"name":"mitochondrial membrane organization and biogenesis","type":"related"}],"termid":"GO:0007006","terms_by_termid":{"GO:0007006":null,"GO:0007007":null,"GO:0007008":null,"GO:0032979":null,"GO:0042407":null,"GO:0045039":null,"GO:0045040":null,"GO:0051204":null,"GO:0070096":null,"GO:1990627":null}}


id: PBO:0004270
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.99.1.2","termid":"PBO:0004270"}


id: GO:0016325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and maintenance of a polarized microtubule array originating from a microtubule-organizing center (MTOC) in the oocyte. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:11231123","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of microtubule cytoskeleton polarity","termid":"GO:0030951"},{"relation_name":"part_of","term_name":"oocyte construction","termid":"GO:0007308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007163","GO:0007010"],"is_obsolete":false,"name":"oocyte microtubule cytoskeleton organization","secondary_identifiers":["GO:0048130"],"synonyms":[{"name":"oocyte microtubule cytoskeleton organisation","type":"exact"}],"termid":"GO:0016325"}


id: PBO:0085142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that forms a complex with Csm1p; and then Mam1p at kinetochores during meiosis I to mediate accurate homolog segregation; required for condensin recruitment to the replication fork barrier site and rDNA repeat segregation","termid":"PBO:0085142"}


id: PBO:0031351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caspofungin","termid":"PBO:0031351"}


id: GO:0002188
data:
  {"annotated_genes":["SJAG_01487","SJAG_02628"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103233,104484],"is_not":false,"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"A gene-specific translational control mechanism where the small ribosomal subunit remains attached to the mRNA following termination of translation, then resumes scanning on the same mRNA molecule and initiates again at a downstream start site. Reinitiation depends on de novo recruitment of the ternary complex that is required to recognize the next AUG codon.","definition_xrefs":["PMID:18056426","PMID:18765792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01487":null,"SJAG_02628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translation reinitiation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002188","terms_by_termid":{"GO:0002188":null}}


id: GO:0060956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. The endocardium is the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell differentiation","termid":"GO:0060956"}


id: PBO:0030792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_with_normal_morphology","termid":"PBO:0030792"}


id: MONDO:0003493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic carcinoma, characterized by the presence of keratinizing or non-keratinizing malignant squamous cells. Approximately 10-20% of cases occur in combination with thymoma. The prognosis depends on the tumor stage and the degree of cellular differentiation.","definition_xrefs":["NCIT:C6455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"thymus squamous cell carcinoma","secondary_identifiers":["DOID:5530","EFO:1000579","UMLS:C1336082","MEDGEN:234814"],"synonyms":[{"name":"Thymus squamous cell carcinoma","type":"exact"},{"name":"epidermoid thymic carcinoma","type":"exact"},{"name":"squamous cell carcinoma of Thymus","type":"exact"},{"name":"squamous cell carcinoma of the Thymus","type":"exact"},{"name":"thymic squamous cell carcinoma","type":"exact"},{"name":"thymus squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003493","xrefs":{"Monarch":{"xref_id":"0003493"}}}


id: PBO:0061509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexin 3","termid":"PBO:0061509"}


id: PBO:0091261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, not reproduced","termid":"PBO:0091261"}


id: FYECO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin","termid":"FYECO:0000395"}


id: PBO:0058666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6794","termid":"PBO:0058666"}


id: SO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a dicistronic transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_polycistronic_transcript","termid":"SO:0000690"},{"relation_name":"transcribed_to","term_name":"dicistronic_transcript","termid":"SO:0000079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_dicistronic_transcript","synonyms":[{"name":"gene with dicistronic transcript","type":"exact"}],"termid":"SO:0000692"}


id: PBO:0083259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; may be part of a bicistronic transcript with NKP2/YLR315W; overlaps the verified ORF TAD3/YLR316C","termid":"PBO:0083259"}


id: MONDO:0006980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ovarian mature teratoma characterized by the presence of aberrant thyroid tissue. The aberrant thyroid tissue shows morphologic changes identical to thyroid adenoma or carcinoma. Patients may present with abdominal mass and unusual symptoms due to thyrotoxicosis, or Meigs syndrome (ascites and pleural effusion).","definition_xrefs":["NCIT:C7468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian monodermal and highly specialized teratoma","termid":"MONDO:0002372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"struma ovarii","secondary_identifiers":["icd11.foundation:185581438","ICDO:9090/0","MEDGEN:20977","EFO:1001192","MESH:D013330","UMLS:C0038478","DOID:2640"],"synonyms":[{"name":"struma ovarii","type":"exact"},{"name":"struma ovarii (morphologic abnormality)","type":"exact"},{"name":"struma ovarii NOS (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006980","xrefs":{"Monarch":{"xref_id":"0006980"}}}


id: GO:0010610
data:
  {"annotated_genes":["SJAG_02573","SJAG_03886","SJAG_05014"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90729,89007,89402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"Any process that modulates the propensity of mRNA molecules to degradation that is part of a change in state or activity of a cell as a result of an exogenous disturbance.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03886":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of mRNA stability involved in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010610","terms_by_termid":{"GO:2000815":null}}


id: PBO:0005425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II heavy chain","termid":"PBO:0005425"}


id: MONDO:1010028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebral amyloid angiopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral amyloid angiopathy, non-human animal","secondary_identifiers":["OMIA:002138"],"termid":"MONDO:1010028","xrefs":{"Monarch":{"xref_id":"1010028"}}}


id: GO:0034535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxy-8-methylnaphthalene + O2 = 2-hydroxy-8-methylchromene-2-carboxylate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-8-methylnaphthalene dioxygenase activity (obsolete GO:0034535)","termid":"GO:0034535"}


id: PBO:0034516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long,_thick_stable_microtubule_bundle","termid":"PBO:0034516"}


id: FYPO:0006844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of the histone variant H2A.Z found associated with chromatin in centromeric regions is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:28904333","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal H2A.Z level at centromere","synonyms":[{"name":"normal H2A.Z level at centromere during mitotic cell cycle","type":"related"},{"name":"normal H2A.Z level at centromere during vegetative growth","type":"exact"},{"name":"normal H2A.Z level in chromatin at centromere","type":"exact"}],"termid":"FYPO:0006844"}


id: SO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for an piwi associated RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piRNA_gene","synonyms":[{"name":"piRNA gene","type":"exact"}],"termid":"SO:0001638"}


id: MONDO:0016915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 17","termid":"MONDO:0016879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 17","secondary_identifiers":["GARD:20836","icd11.foundation:186065235","Orphanet:262137","UMLS:C5679727","MEDGEN:1826046"],"synonyms":[{"name":"partial deletion of chromosome 17q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 17","type":"exact"},{"name":"partial monosomy of chromosome 17q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 17","type":"exact"}],"termid":"MONDO:0016915","xrefs":{"Monarch":{"xref_id":"0016915"}}}


id: PBO:0038831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 4","termid":"PBO:0038831"}


id: PBO:0060388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid zinc finger 1","termid":"PBO:0060388"}


id: PBO:0049896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase family member 6","termid":"PBO:0049896"}


id: GO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the retina.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of retinal cell programmed cell death","termid":"GO:0046668"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"retinal cell programmed cell death","termid":"GO:0046666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cell programmed cell death","synonyms":[{"name":"down regulation of retinal programmed cell death","type":"exact"},{"name":"down-regulation of retinal programmed cell death","type":"exact"},{"name":"downregulation of retinal programmed cell death","type":"exact"},{"name":"inhibition of retinal programmed cell death","type":"narrow"},{"name":"negative regulation of retinal programmed cell death","type":"exact"}],"termid":"GO:0046671"}


id: MONDO:0021656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term that refers to teratoma, embryonal carcinoma, yolk sac tumor, choriocarcinoma, or mixed forms of these tumors.","definition_xrefs":["NCIT:C121619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nongerminomatous germ cell tumor","secondary_identifiers":["UMLS:C1266158","ONCOTREE:NSGCT","MEDGEN:220426"],"synonyms":[{"name":"NSGCT","type":"related"},{"name":"Nongerminomatous germ cell tumor","type":"exact"},{"name":"Nongerminomatous germ cell tumor Including central nervous system","type":"exact"},{"name":"Nongerminomatous germ cell tumour","type":"exact"},{"name":"Nongerminomatous germ cell tumour Including central nervous system","type":"exact"},{"name":"non-dysgerminomatous germ cell tumor","type":"exact"},{"name":"non-dysgerminomatous germ cell tumour","type":"exact"},{"name":"non-germinomatous germ cell tumor","type":"exact"},{"name":"non-germinomatous germ cell tumour","type":"exact"},{"name":"non-seminomatous germ cell tumor","type":"exact"},{"name":"non-seminomatous germ cell tumour","type":"exact"}],"termid":"MONDO:0021656","xrefs":{"Monarch":{"xref_id":"0021656"}}}


id: PBO:0042912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 2","termid":"PBO:0042912"}


id: GO:0035188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The emergence of an immature organism from a protective structure.","definition_xrefs":["ISBN:0198612001","GOC:dgh","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organism emergence from protective structure","termid":"GO:0071684"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hatching","termid":"GO:0035188"}


id: MONDO:0004500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma originating from the apical lung. Most superior sulcus lung carcinomas are bronchogenic carcinomas. This carcinoma may be associated with Pancoast syndrome. lt is also known as Pancoast tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant superior sulcus neoplasm","termid":"MONDO:0006883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung superior sulcus carcinoma","secondary_identifiers":["MEDGEN:234910","NCIT:C7779","UMLS:C1336529","DOID:8208"],"synonyms":[{"name":"superior sulcus carcinoma of lung","type":"related"},{"name":"superior sulcus carcinoma of the lung","type":"exact"},{"name":"superior sulcus lung carcinoma","type":"exact"}],"termid":"MONDO:0004500","xrefs":{"Monarch":{"xref_id":"0004500"}}}


id: GO:0016183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of clathrin coated pits in the presynaptic membrane endocytic zone, triggered by the presence of high concentrations of synaptic vesicle components. This process leads to, but does not include budding of the membrane to form new vesicles.","definition_xrefs":["PMID:10099709","PMID:20448150","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle coating","termid":"GO:0006901"},{"relation_name":"part_of","term_name":"synaptic vesicle budding from presynaptic endocytic zone membrane","termid":"GO:0016185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle coating","termid":"GO:0016183"}


id: PBO:0017801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-ribose methyltransferase Trm7 (predicted)","termid":"PBO:0017801"}


id: PBO:0060429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic acid binding protein 2","termid":"PBO:0060429"}


id: GO:0035799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the ureter to attain its fully functional state. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf","GOC:yaf","PMID:17881463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"ureter development","termid":"GO:0072189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter maturation","termid":"GO:0035799"}


id: SO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with DNA.","definition_xrefs":["EBIBS:GAR","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_DNA_contact","synonyms":[{"name":"DNA_bind","type":"exact"},{"name":"polypeptide DNA contact","type":"exact"}],"termid":"SO:0100020"}


id: PBO:0081095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 20 pseudogene 4","termid":"PBO:0081095"}


id: GO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + NADP+ = CO2 + NADPH + succinyl-CoA.","definition_xrefs":["RHEA:21400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoglutarate dehydrogenase [NAD(P)+] activity","termid":"GO:0034601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:OXOGLUTARATE-DEHYDROGENASE-NADP+-RXN","EC:1.2.1.52","KEGG_REACTION:R00265"],"synonyms":[{"name":"2-oxoglutarate:NADP+ 2-oxidoreductase (CoA-succinylating)","type":"related"}],"termid":"GO:0050164"}


id: GO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:add","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytolysis by symbiont of host cells (obsolete GO:0001900)","synonyms":[{"name":"activation by symbiont of cytolysis of host cells","type":"narrow"},{"name":"positive regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"stimulation by symbiont of cytolysis of host cells","type":"narrow"},{"name":"up regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"up-regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"upregulation by symbiont of cytolysis of host cells","type":"exact"}],"termid":"GO:0001900"}


id: GO:0038182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular bile acid and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:12524422","PMID:35415765","PMID:36409000","PMID:32480317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled bile acid receptor activity","secondary_identifiers":["Wikipedia:G_protein-coupled_bile_acid_receptor"],"synonyms":[{"name":"G-protein coupled bile acid receptor activity","type":"exact"},{"name":"cell surface bile acid receptor","type":"broad"},{"name":"lithocholic acid receptor activity","type":"broad"},{"name":"membrane bile acid receptor activity","type":"broad"}],"termid":"GO:0038182"}


id: PBO:0003549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon-like protein Rtn1","termid":"PBO:0003549"}


id: MONDO:1012146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, domestic cat","secondary_identifiers":["OMIA:000621-9685"],"termid":"MONDO:1012146","xrefs":{"Monarch":{"xref_id":"1012146"}}}


id: PR:Q9UUG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tuberin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10063:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberous sclerosis 2 protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.13c","secondary_identifiers":["UniProtKB:Q9UUG9"],"synonyms":[{"name":"SPAC630.13c","type":"related"},{"name":"Spom972h-TSC2","type":"exact"}],"termid":"PR:Q9UUG9"}


id: GO:0090011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes that contribute to the formation of the primitive streak.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in primitive streak formation (obsolete GO:0090011)","synonyms":[{"name":"Wnt receptor signaling pathway involved in primitive streak formation","type":"exact"},{"name":"Wnt receptor signalling pathway involved in primitive streak formation","type":"exact"},{"name":"Wnt-activated signaling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090011"}


id: PBO:0068797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 34, pseudogene","termid":"PBO:0068797"}


id: MONDO:0015707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete DNA repair defect other than combined T-cell and B-cell immunodeficiencies (obsolete MONDO:0015707)","secondary_identifiers":["Orphanet:169346","icd11.foundation:1362501774"],"termid":"MONDO:0015707","xrefs":{"Monarch":{"xref_id":"0015707"}}}


id: GO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class Ib","synonyms":[{"name":"exogenous peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002477"}


id: PBO:0059502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded ATP synthase membrane subunit 6","termid":"PBO:0059502"}


id: GO:0071495
data:
  {"annotated_genes":["SJAG_03048","SJAG_00082","SJAG_04183","SJAG_01837","SJAG_01805","SJAG_04140","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101565,89205,110345,115812,93001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[103333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[101576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[89210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[101577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[93744,101578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to endogenous stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071495","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: MONDO:0002971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma characterized by the complete absence of melanin pigment in the melanoma cells. It occurs more frequently on the face and it is often associated with desmoplastic reaction.","definition_xrefs":["NCIT:C3802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelanotic melanoma","secondary_identifiers":["DOID:4359","MEDGEN:64644","EFO:1001937","ICDO:8730/3","UMLS:C0206735","MESH:D018328"],"synonyms":[{"name":"amelanotic melanoma","type":"exact"},{"name":"amelanotic melanoma (morphologic abnormality)","type":"exact"},{"name":"amelanotic melanomas","type":"related"},{"name":"melanoma, amelanotic, malignant","type":"exact"},{"name":"melanomas, amelanotic","type":"related"}],"termid":"MONDO:0002971","xrefs":{"Monarch":{"xref_id":"0002971"}}}


id: PBO:0077760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 2","termid":"PBO:0077760"}


id: MONDO:0002408
data:
  {"annotated_genes":["SJAG_05213","SJAG_03785","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84531,84529,84530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"}]},"cv_name":"mondo","definition":"An inherited disorder affecting the metabolism of bilirubin. It results in increased levels of bilirubin in the blood. Representative examples of this condition include Gilbert syndrome and Crigler-Najjar syndrome.","definition_xrefs":["NCIT:C84761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of bilirubin metabolism","termid":"MONDO:0017755"},{"relation_name":"is_a","term_name":"hyperbilirubinemia","termid":"MONDO:0024288"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hereditary hyperbilirubinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:237450","DOID:2741","MEDGEN:6963","SCTID:14783006","MESH:D006933","UMLS:C0020435"],"synonyms":[{"name":"bilirubin metabolic disorder","type":"broad"},{"name":"hereditary hyperbilirubinemia","type":"exact"},{"name":"hyperbilirubinaemia","type":"broad"},{"name":"hyperbilirubinemia","type":"broad"}],"termid":"MONDO:0002408","terms_by_termid":{"MONDO:0009380":null},"xrefs":{"Monarch":{"xref_id":"0002408"}}}


id: PBO:0050826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxypyruvate isomerase (putative)","termid":"PBO:0050826"}


id: GO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of T cell antigen processing and presentation","termid":"GO:0002625"},{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"positively_regulates","term_name":"T cell antigen processing and presentation","termid":"GO:0002457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell antigen processing and presentation","synonyms":[{"name":"activation of T cell antigen processing and presentation","type":"narrow"},{"name":"positive regulation of T lymphocyte antigen processing and presentation","type":"exact"},{"name":"positive regulation of T-cell antigen processing and presentation","type":"exact"},{"name":"positive regulation of T-lymphocyte antigen processing and presentation","type":"exact"},{"name":"stimulation of T cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of T cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of T cell antigen processing and presentation","type":"exact"},{"name":"upregulation of T cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002627"}


id: PBO:0064346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A4","termid":"PBO:0064346"}


id: GO:0003782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete F-actin capping activity (obsolete GO:0003782)","synonyms":[{"name":"F-actin capping activity","type":"exact"}],"termid":"GO:0003782"}


id: GO:0098692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses noradrenaline as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"noradrenergic synapse","termid":"GO:0098692"}


id: PBO:0077428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 165","termid":"PBO:0077428"}


id: PBO:0051907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha L","termid":"PBO:0051907"}


id: PBO:0064922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 4","termid":"PBO:0064922"}


id: PBO:0078600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 13","termid":"PBO:0078600"}


id: GO:1902954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early endosome to recycling endosome transport.","definition_xrefs":["GOC:TermGenie","GOC:sjp","GO_REF:0000058","PMID:22621900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"early endosome to recycling endosome transport","termid":"GO:0061502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of early endosome to recycling endosome transport","termid":"GO:1902954"}


id: GO:0120177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the torso signaling pathway.","definition_xrefs":["PMID:23732470","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of torso signaling pathway","termid":"GO:0120175"},{"relation_name":"negatively_regulates","term_name":"torso signaling pathway","termid":"GO:0008293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of torso signaling pathway","termid":"GO:0120177"}


id: PBO:0086842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pulcherrimin transporter; involved in uptake of iron-transporting siderophore, pulcherrimin","termid":"PBO:0086842"}


id: GO:0017071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which cations ions may pass in response to an intracellular cyclic nucleotide binding to the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"intracellular cyclic nucleotide activated cation channel complex","termid":"GO:0017071"}


id: GO:0051310
data:
  {"annotated_genes":["SJAG_00335","SJAG_01224","SJAG_00794","SJAG_02346","SJAG_02624","SJAG_03698","SJAG_01297","SJAG_05319","SJAG_07002","SJAG_04745","SJAG_01775","SJAG_03217","SJAG_02761","SJAG_01371","SJAG_02045","SJAG_04140","SJAG_04076","SJAG_04623","SJAG_05290","SJAG_02336","SJAG_01805","SJAG_04508","SJAG_03437","SJAG_05220","SJAG_03926","SJAG_03220","SJAG_03126","SJAG_04259","SJAG_02451","SJAG_03683","SJAG_00918","SJAG_01370","SJAG_04040","SJAG_01613","SJAG_03048","SJAG_00646","SJAG_02731","SJAG_01278","SJAG_00768","SJAG_01082","SJAG_04412","SJAG_01837","SJAG_01211","SJAG_00678","SJAG_03540","SJAG_05295","SJAG_05019","SJAG_04884","SJAG_03543","SJAG_03989","SJAG_05266","SJAG_00207","SJAG_01601","SJAG_04280","SJAG_00930","SJAG_03327","SJAG_00082","SJAG_02814","SJAG_00418","SJAG_02286","SJAG_00302"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115800],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051316"},{"annotations":[93025,87080],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[115661,90199,89245,97098,104636,110826,109460,90589,100516,101619,112910,99566,117268,94502,117784,109059,97819,87215,109503,86967,94755],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[111098],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008608"},{"annotations":[89493,106978,100517,116192,97820,92989,87023,112912,114670],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[107406],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[109060,93969],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[98423,107410,93397,97822,103072],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[88953,106662,113229,115803,113633,93398,111751,111753,109044,112362,101199,103073,97824,108034,117816,99705,88349,97823,90187,101198,107411,116049,101621,98322,102722,93027,88569,111752,112914,101200],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[101545],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[115143,111102,104341],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[101565,110345,89205,93001,115812],"is_not":false,"rel_names":["regulates","part_of"],"summary":null,"term":"GO:0140429"},{"annotations":[115815],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[115816],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140273"},{"annotations":[108295],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[94507,88955,109046,94756,99707,108296,93006,108036,101622,106664,97099,113231,104639,116051,90189,88351,109504,106982,109463,97828,115060,100521,112363],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02624":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03683":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"metaphase chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome congression","type":"narrow"}],"termid":"GO:0051310","terms_by_termid":{"GO:0008608":null,"GO:0031134":null,"GO:0031619":null,"GO:0051315":null,"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:0099606":null,"GO:0099607":null,"GO:0140273":null,"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1904967":null,"GO:1990758":null,"GO:1990942":null}}


id: GO:0060587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of lipoprotein lipid oxidation. Lipoprotein lipid oxidation is the modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"is_a","term_name":"regulation of lipoprotein oxidation","termid":"GO:0034442"},{"relation_name":"regulates","term_name":"lipoprotein lipid oxidation","termid":"GO:0034439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of lipoprotein lipid oxidation","termid":"GO:0060587"}


id: PBO:0073975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 31","termid":"PBO:0073975"}


id: PBO:0091035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Gem8","termid":"PBO:0091035"}


id: PBO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDN and PRKAG1 antisense RNA 1","termid":"PBO:0044686"}


id: PBO:0067110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 152, pseudogene","termid":"PBO:0067110"}


id: GO:0042897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"polymyxin transmembrane transporter activity","synonyms":[{"name":"polymyxin transporter activity","type":"related"}],"termid":"GO:0042897"}


id: GO:0070300
data:
  {"annotated_genes":["SJAG_03563","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105373,105755],"is_not":false,"summary":null,"term":"GO:0070300"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidic acid, any of a class of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids.","definition_xrefs":["GOC:jp","ISBN:0198506732","CHEBI:16337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"phosphatidic acid binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidate binding","type":"exact"}],"termid":"GO:0070300","terms_by_termid":{"GO:0070300":null}}


id: GO:0033321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homomethionine, a non-protein amino acid synthesized from methionine via chain elongation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"homomethionine metabolic process","synonyms":[{"name":"homomethionine metabolism","type":"exact"}],"termid":"GO:0033321"}


id: GO:1901046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of egg-laying behavior","synonyms":[{"name":"activation of egg laying","type":"broad"},{"name":"activation of egg-laying","type":"broad"},{"name":"activation of oviposition","type":"narrow"},{"name":"positive regulation of egg laying","type":"broad"},{"name":"positive regulation of egg-laying","type":"broad"},{"name":"positive regulation of oviposition","type":"exact"},{"name":"up regulation of egg laying","type":"broad"},{"name":"up regulation of egg-laying","type":"broad"},{"name":"up regulation of oviposition","type":"exact"},{"name":"up-regulation of egg laying","type":"broad"},{"name":"up-regulation of egg-laying","type":"broad"},{"name":"up-regulation of oviposition","type":"exact"},{"name":"upregulation of egg laying","type":"broad"},{"name":"upregulation of egg-laying","type":"broad"},{"name":"upregulation of oviposition","type":"exact"}],"termid":"GO:1901046"}


id: GO:0060458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a right lung from an initial condition to its mature state. This process begins with the formation of the right lung and ends with the mature structure. The right lung is the lung which is on the right side of the anterior posterior axis looking from a dorsal to ventral aspect.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right lung development","synonyms":[{"name":"right pulmonary development","type":"exact"}],"termid":"GO:0060458"}


id: PBO:0078633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIO and F-actin binding protein","termid":"PBO:0078633"}


id: PBO:0069366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 626, pseudogene","termid":"PBO:0069366"}


id: PBO:0080211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Hippel-Lindau tumor suppressor","termid":"PBO:0080211"}


id: GO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the generation of sequence diversity of the FREP-based immune receptors of snails.","definition_xrefs":["PMID:16102575","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of FREP-based immune receptors","termid":"GO:0002567"}


id: GO:0102788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-coumaryl-CoA + pelargonidin 3-O-beta-D-glucoside = pelargonidin 3-O-beta-D-p-coumaroylglucoside + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-coumaroyl-CoA:pelargonidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity (obsolete GO:0102788)","termid":"GO:0102788"}


id: GO:1903327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tRNA metabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of tRNA metabolic process","termid":"GO:1903326"},{"relation_name":"negatively_regulates","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tRNA metabolic process","synonyms":[{"name":"down regulation of tRNA metabolic process","type":"exact"},{"name":"down regulation of tRNA metabolism","type":"exact"},{"name":"down-regulation of tRNA metabolic process","type":"exact"},{"name":"down-regulation of tRNA metabolism","type":"exact"},{"name":"downregulation of tRNA metabolic process","type":"exact"},{"name":"downregulation of tRNA metabolism","type":"exact"},{"name":"inhibition of tRNA metabolic process","type":"narrow"},{"name":"inhibition of tRNA metabolism","type":"narrow"},{"name":"negative regulation of tRNA metabolism","type":"exact"}],"termid":"GO:1903327"}


id: GO:0097551
data:
  {"annotated_genes":["SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097552"}]},"cv_name":"biological_process","definition":"The repair of double-strand breaks in mitochondrial DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.","definition_xrefs":["GOC:di","PMID:22214610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"mitochondrial double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mtDSB repair","type":"exact"}],"termid":"GO:0097551","terms_by_termid":{"GO:0097552":null}}


id: GO:0098926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signal transduction in which the initial step occurs in a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"postsynaptic signal transduction","synonyms":[{"name":"postsynaptic signaling pathway","type":"exact"}],"termid":"GO:0098926"}


id: PBO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heat shock protein Hsp60/Mcp60","termid":"PBO:0000300"}


id: GO:0106381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a purine deoxyribonucleotide from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:6605343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine nucleotide salvage","termid":"GO:0032261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleotide salvage","termid":"GO:0106381"}


id: FYPO:0001235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth in a cell population occurs to a lower extent than normal, i.e. the population stops growing earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"decreased extent of cell population growth","synonyms":[{"name":"reduced extent of cell population growth","type":"exact"}],"termid":"FYPO:0001235"}


id: PBO:0029054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation","termid":"PBO:0029054"}


id: MONDO:0009787
data:
  {"annotated_genes":["SJAG_02641"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86149],"is_not":false,"summary":null,"term":"MONDO:0009787"}]},"cv_name":"mondo","definition":"3-methylglutaconic aciduria type III (MGA III) is an organic aciduria characterized by the association of optic atrophy and choreoathetosis with 3-methylglutaconic aciduria.","definition_xrefs":["Orphanet:67047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:535412248","MESH:C535311","NANDO:1200992","DOID:0110004","SCTID:297232009","GARD:5663","MEDGEN:108273","UMLS:C0574084","OMIM:258501"],"synonyms":[{"name":"3-alpha methylglutaconic aciduria type III","type":"related"},{"name":"3-methylglutaconic aciduria caused by mutation in OPA3","type":"exact"},{"name":"3-methylglutaconic aciduria type III","type":"exact"},{"name":"3-methylglutaconic aciduria, type 3","type":"related"},{"name":"3-methylglutaconic aciduria, type III","type":"related"},{"name":"Costeff optic atrophy syndrome","type":"exact"},{"name":"Costeff syndrome","type":"exact"},{"name":"Iraqi Jewish optic atrophy plus","type":"related"},{"name":"Iraqi-Jewish 'optic atrophy plus'","type":"related"},{"name":"Iraqi-Jewish optic atrophy plus","type":"exact"},{"name":"MGA type III","type":"related"},{"name":"MGA, type 3","type":"related"},{"name":"MGA3","type":"exact"},{"name":"MGCA3","type":"related"},{"name":"OPA3 3-methylglutaconic aciduria","type":"exact"},{"name":"OPA3 defect","type":"broad"},{"name":"OPA3, autosomal recessive","type":"related"},{"name":"autosomal recessive optic atrophy plus syndrome","type":"exact"},{"name":"autosomal recessive optic atrophy type 3","type":"exact"},{"name":"infantile optic atrophy with chorea and spastic paraplegia","type":"exact"},{"name":"optic atrophy 3, autosomal recessive","type":"related"},{"name":"optic atrophy infantile with chorea and spastic paraplegia","type":"related"},{"name":"optic atrophy plus syndrome","type":"related"},{"name":"optic atrophy, infantile, with chorea and spastic paraplegia","type":"related"}],"termid":"MONDO:0009787","terms_by_termid":{"MONDO:0009787":null},"xrefs":{"Monarch":{"xref_id":"0009787"}}}


id: PBO:0063758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB2 pseudogene 1","termid":"PBO:0063758"}


id: MONDO:1012219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic mononephrosis, non-human animal","termid":"MONDO:1011908"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic mononephrosis, dog","secondary_identifiers":["OMIA:000808-9615"],"termid":"MONDO:1012219","xrefs":{"Monarch":{"xref_id":"1012219"}}}


id: PBO:0041327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 80","termid":"PBO:0041327"}


id: PR:Q9US46
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase RNF14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00750","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase itt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.14","secondary_identifiers":["UniProtKB:Q9US46"],"synonyms":[{"name":"RING finger protein itt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNF14","type":"exact"}],"termid":"PR:Q9US46"}


id: PBO:0004814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis factor recycling AAA family ATPase (predicted)","termid":"PBO:0004814"}


id: FYPO:0004348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing methylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on methylglyoxal","synonyms":[{"name":"normal cell population growth in presence of methylglyoxal","type":"exact"},{"name":"normal cell population growth on methylglyoxal","type":"exact"},{"name":"normal cellular response to methylglyoxal","type":"related"},{"name":"normal vegetative cell population growth on methylglyoxal","type":"exact"}],"termid":"FYPO:0004348"}


id: PBO:0072862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP","termid":"PBO:0072862"}


id: PBO:0051183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-74","termid":"PBO:0051183"}


id: PBO:0068238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S pre-ribosomal N4","termid":"PBO:0068238"}


id: PATO:0000962
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000962 absolute opacity value (obsolete PATO:0000962)","termid":"PATO:0000962"}


id: GO:0047575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-(carboxymethyl)-5-oxo-2,5-dihydro-2-furoate + H+ = 5-oxo-4,5-dihydro-2-furylacetate + CO2.","definition_xrefs":["EC:4.1.1.44","RHEA:23348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"4-carboxymuconolactone decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03470","MetaCyc:4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"4-carboxymonolactone carboxy-lyase activity","type":"related"},{"name":"4-carboxymuconolactone carboxy-lyase (4,5-dihydro-5-oxofuran-2-acetate-forming)","type":"related"},{"name":"4-carboxymuconolactone carboxy-lyase activity","type":"related"},{"name":"gamma-4-carboxymuconolactone decarboxylase activity","type":"related"}],"termid":"GO:0047575"}


id: GO:0014829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in the vascular tissue, whereby actin/myosin complex activity generates force through ATP hydrolysis resulting in a change in smooth muscle geometry. This process is always coupled to chemo-mechanical energy conversion.","definition_xrefs":["MA:0002718","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle contraction","synonyms":[{"name":"vascular smooth muscle contraction","type":"exact"}],"termid":"GO:0014829"}


id: PBO:0054680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2088","termid":"PBO:0054680"}


id: PBO:0027278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_UV-damage_excision_repair_during_mitotic_G1_phase","termid":"PBO:0027278"}


id: PBO:0052039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JunB proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052039"}


id: PBO:0060421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylated alpha-linked acidic dipeptidase like 2","termid":"PBO:0060421"}


id: PBO:0062788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 2","termid":"PBO:0062788"}


id: PR:O94631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03986","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.13c","secondary_identifiers":["UniProtKB:O94631"],"synonyms":[{"name":"21S rRNA (guanosine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRM1","type":"exact"},{"name":"mitochondrial large ribosomal RNA ribose methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94631"}


id: MONDO:0027772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of lung adenocarcinoma characterized by the presence of mucin pools containing islands of well differentiated adenocarcinoma cells.","definition_xrefs":["NCIT:C45512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung colloid adenocarcinoma","secondary_identifiers":["DOID:0080304","MEDGEN:313370","UMLS:C1708776","DOID:0080303"],"synonyms":[{"name":"lung colloid adenocarcinoma","type":"exact"},{"name":"lung mucinous cystadenocarcinoma","type":"exact"},{"name":"lung mucinous cystic tumor of borderline malignancy","type":"exact"},{"name":"lung mucinous cystic tumour of borderline malignancy","type":"exact"},{"name":"mucinous lung adenocarcinoma","type":"related"}],"termid":"MONDO:0027772","xrefs":{"Monarch":{"xref_id":"0027772"}}}


id: GO:0008114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = 6-phospho-2-dehydro-D-gluconate + NADPH.","definition_xrefs":["EC:1.1.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phosphogluconate 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.43-RXN"],"synonyms":[{"name":"2-keto-6-phosphogluconate reductase activity","type":"related"},{"name":"6-phospho-D-gluconate:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"6-phosphogluconate 2-dehydrogenase activity","type":"exact"},{"name":"6-phosphogluconate dehydrogenase (NAD)","type":"related"},{"name":"6-phosphogluconic dehydrogenase activity","type":"broad"},{"name":"gluconate 6-phosphate dehydrogenase activity","type":"related"},{"name":"phosphogluconate dehydrogenase activity","type":"related"}],"termid":"GO:0008114"}


id: PBO:0052734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 26","termid":"PBO:0052734"}


id: MONDO:0022968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dextrocardia with situs inversus is a condition that is characterized by abnormal positioning of the heart and other internal organs. In people affected by dextrocardia, the tip of the heart points towards the right side of the chest instead of the left side. Situs inversus refers to the mirror-image reversal of the organs in the chest and abdominal cavity. Some affected people have no obvious signs or symptoms. However, a small percentage of people also have congenital heart defects, usually transposition of the great vessels. Dextrocardia with situs inversus can also be associated with primary ciliary dyskinesia (also known as Kartagener syndrome). Treatment typically depends on the heart or physical problems the person may have in addition to dextrocardia with situs inversus.","definition_xrefs":["GARD:0006268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrocardia with situs inversus","secondary_identifiers":["UMLS:C1395317","MEDGEN:237234"],"synonyms":[{"name":"situs inversus totalis","type":"related"}],"termid":"MONDO:0022968","xrefs":{"Monarch":{"xref_id":"0022968"}}}


id: PBO:0036547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit Lsc2 (predicted)","termid":"PBO:0036547"}


id: MONDO:0017511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand, unilateral is a rare, non-syndromic limb reduction defect, clinically and genetically heterogeneous, characterized by unilateral underdevelopment or absence of the central rays of the autopod, with absence of all, or just some, of the central phalanges and at least part of the associated metacarpal bones, yielding a cleft appearance of the hand. It is frequently associated with syndactyly and aplasia/hypoplasia of remaining digits and metacarpal bones. No other dysmorphic features are observed and development is appropriate for age.","definition_xrefs":["Orphanet:295120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand","termid":"MONDO:0017449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand, unilateral","secondary_identifiers":["icd11.foundation:1675694993"],"termid":"MONDO:0017511","xrefs":{"Monarch":{"xref_id":"0017511"}}}


id: MOD:01840
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to L-allo-isoleucine.","definition_xrefs":["RESID:AA0546","ChEBI:43433","PubMed:20805503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-allo-isoleucine","synonyms":[{"name":"(2S,3R)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"L-allo-isoleucine","type":"exact"},{"name":"L-threo-isoleucine","type":"exact"},{"name":"MOD_RES L-allo-isoleucine","type":"exact"},{"name":"allo-L-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:01840"}


id: GO:0018133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl cysteine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue.","definition_xrefs":["RESID:AA0239"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteine oxazolinecarboxylic acid (obsolete GO:0018133)","termid":"GO:0018133"}


id: PBO:0036293
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective in Mitotic Arrest","termid":"PBO:0036293"}


id: MOD:01187
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an L-pyrrolysine residue, a natural pretranslational modification.","definition_xrefs":["PubMed:11435424","RESID:AA0321","ChEBI:21860","PubMed:12029132","PubMed:16096277","PubMed:12029131","PubMed:15314242","Unimod:435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pyrrolysine residue","synonyms":[{"name":"(2S)-2-amino-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]aminohexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]azanylhexanoic acid","type":"exact"},{"name":"L-pyrrolysine","type":"exact"},{"name":"N6-(4-methyl-1,2-didehydropyrrolidine-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-(4-methyl-delta-1-pyrroline-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-([(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl)-L-lysine","type":"exact"},{"name":"NON_STD Pyrrolysine","type":"exact"},{"name":"Pyl","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct","type":"exact"}],"termid":"MOD:01187"}


id: MONDO:1012028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bleeding disorder, non-human animal","termid":"MONDO:1011685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, domestic cat","secondary_identifiers":["OMIA:000113-9685"],"termid":"MONDO:1012028","xrefs":{"Monarch":{"xref_id":"1012028"}}}


id: PBO:0048647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 7","termid":"PBO:0048647"}


id: GO:0102287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-coumaryl-CoA + 3-oxooctanoyl-CoA + H2O = 4-coumaroylhexanoylmethane + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-coumaroylhexanoylmethane synthase activity (obsolete GO:0102287)","termid":"GO:0102287"}


id: MONDO:0006492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vulvar squamous cell carcinoma (obsolete MONDO:0006492)","termid":"MONDO:0006492","xrefs":{"Monarch":{"xref_id":"0006492"}}}


id: PBO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamartin","termid":"PBO:0000526"}


id: FYPO:0000809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion organization is abnormal. Mitochondrion organization results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion, and includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome, as well as synthesis of new mitochondrial components.","definition_xrefs":["PomBase:mah","GO:0007005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitochondrion organization","synonyms":[{"name":"abnormal mitochondrion organisation","type":"exact"},{"name":"abnormal mitochondrion organization during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrion organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000809"}


id: FYPO:0007834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is altered such that more of the protein is present at the 3' end, and less at the 5' end, than normal.","definition_xrefs":["PMID:31837996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes","synonyms":[{"name":"decreased protein localization to chromatin at 5' end of RNA polymerase II-transcribed genes with increased localization towards 3' end","type":"exact"},{"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes during vegetative growth","type":"exact"}],"termid":"FYPO:0007834"}


id: GO:0021573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 7 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:curators","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 development","termid":"GO:0021573"}


id: PBO:0070814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 44","termid":"PBO:0070814"}


id: GO:0010106
data:
  {"annotated_genes":["SJAG_04743","SJAG_04032","SJAG_04677","SJAG_04031","SJAG_02474"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91654,93302,93310,99669,102964],"is_not":false,"summary":null,"term":"GO:0010106"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of iron ions.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"part_of","term_name":"intracellular iron ion homeostasis","termid":"GO:0006879"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02474":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04677":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"cellular response to iron ion starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010106","terms_by_termid":{"GO:0010106":null}}


id: PBO:0090869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m5U54) methyltransferase Trm2","termid":"PBO:0090869"}


id: PBO:0075101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 150","termid":"PBO:0075101"}


id: GO:0060503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a bud in the lung increases radially.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis elongation","termid":"GO:0003401"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud dilation involved in lung branching","synonyms":[{"name":"bud expansion","type":"exact"}],"termid":"GO:0060503"}


id: MONDO:0015714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary central precocious puberty","secondary_identifiers":["Orphanet:169618"],"termid":"MONDO:0015714","xrefs":{"Monarch":{"xref_id":"0015714"}}}


id: MONDO:0017718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial disorder due to a defect in assembly or maturation of the respiratory chain complexes (obsolete MONDO:0017718)","secondary_identifiers":["NANDO:2200522","Orphanet:309136"],"termid":"MONDO:0017718","xrefs":{"Monarch":{"xref_id":"0017718"}}}


id: GO:0051371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc.","definition_xrefs":["PMID:10984498","PMID:15014165","PMID:11699871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-actinin binding","termid":"GO:0051393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"muscle alpha-actinin binding","synonyms":[{"name":"alpha-actinin 2 binding","type":"narrow"},{"name":"alpha-actinin 3 binding","type":"narrow"}],"termid":"GO:0051371"}


id: GO:0038054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with estrogen and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:20960099","GOC:signaling","PMID:17379646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled estrogen receptor activity","synonyms":[{"name":"G-protein coupled estrogen receptor activity","type":"exact"},{"name":"estrogen receptor activity","type":"broad"}],"termid":"GO:0038054"}


id: PBO:0089196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar DNAJ domain protein, DNAJC9 family, implicated in mRNA splicing","termid":"PBO:0089196"}


id: PBO:0064601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU2F2 antisense RNA 2","termid":"PBO:0064601"}


id: MONDO:0008169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplasia, rhizomelic, with callosal agenesis, thrombocytopenia, hydrocephalus, and hypertension","secondary_identifiers":["OMIM:166990","UMLS:C1833688","MEDGEN:322254","MESH:C563478"],"synonyms":[{"name":"osteochondrodysplasia with rhizomelia, platyspondyly, callosal agenesis, thrombocytopenia, hydrocephalus, and hypertension","type":"related"},{"name":"osteochondrodysplasia, rhizomelic, with callosal agenesis, thrombocytopenia, hydrocephalus, and hypertension","type":"exact"}],"termid":"MONDO:0008169","xrefs":{"Monarch":{"xref_id":"0008169"}}}


id: PBO:0029286
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_Mmi1_focus","termid":"PBO:0029286"}


id: PBO:0039869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 28","termid":"PBO:0039869"}


id: PBO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase (predicted)","termid":"PBO:0000256"}


id: PBO:0015661
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae AOS1","termid":"PBO:0015661"}


id: GO:0071142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a single type of SMAD family proteins. In the absence of Smad4, phosphorylation of R-SMADs results in their homotrimerization. However, these complexes do not appear to import into the nucleus and are assumed to be transcriptionally inactive.","definition_xrefs":["PMID:16322555","GOC:bhm","PMID:9670020","PMID:11779505","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD protein complex","termid":"GO:0071141"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"homomeric SMAD protein complex","secondary_identifiers":["GO:0071143"],"synonyms":[{"name":"SMAD1 homotrimer complex","type":"narrow"},{"name":"SMAD1 protein complex","type":"narrow"},{"name":"SMAD2 homotrimer complex","type":"narrow"},{"name":"SMAD2 protein complex","type":"narrow"},{"name":"SMAD3 homotrimer complex","type":"narrow"},{"name":"SMAD3 protein complex","type":"narrow"}],"termid":"GO:0071142"}


id: GO:0006383
data:
  {"annotated_genes":["SJAG_04161","SJAG_00585","SJAG_05339","SJAG_03144","SJAG_03007","SJAG_03761","SJAG_03931","SJAG_03578","SJAG_03921","SJAG_04408","SJAG_01713","SJAG_02898","SJAG_03546","SJAG_00731","SJAG_02070","SJAG_00637","SJAG_01827","SJAG_01444","SJAG_01313","SJAG_00619","SJAG_03014","SJAG_01765","SJAG_00067","SJAG_02242","SJAG_03120","SJAG_04030","SJAG_04934","SJAG_03035","SJAG_00142","SJAG_02600","SJAG_02815","SJAG_00421","SJAG_03689","SJAG_02101","SJAG_03354","SJAG_03181","SJAG_04261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62085,63497,63703,65429,66502,88129,88764,91232,93103,100691,101866,102517,104953,110618,111515,111781,115590,115898],"is_not":false,"summary":null,"term":"GO:0006383"},{"annotations":[108283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[95586],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0016480"},{"annotations":[107560,90391],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006359"},{"annotations":[102246,115340],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070898"},{"annotations":[92223,97346,99076,115124],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006386"},{"annotations":[107594,88130,114500,100731,98773,106084,108284,102247,94775,87399],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006384"},{"annotations":[114804,74641,91235,93106,112932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042797"}]},"cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter.","definition_xrefs":["GOC:txnOH","GOC:jl","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00142":null,"SJAG_00421":null,"SJAG_00585":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01827":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02242":null,"SJAG_02600":null,"SJAG_02815":null,"SJAG_02898":null,"SJAG_03007":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03120":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_03578":null,"SJAG_03689":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_03931":null,"SJAG_04030":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04934":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0001035","GO:0001009","GO:0001041"],"synonyms":[{"name":"RNA polymerase III transcription factor activity","type":"related"},{"name":"U2 snRNA transcription (S. cerevisiae)","type":"narrow"},{"name":"U6 snRNA transcription (mammalian)","type":"narrow"},{"name":"transcription from Pol III promoter","type":"exact"},{"name":"transcription from RNA polymerase III promoter","type":"exact"},{"name":"transcription from RNA polymerase III type 2 promoter","type":"narrow"},{"name":"transcription from RNA polymerase III type 3 promoter","type":"narrow"},{"name":"transcription from a RNA polymerase III hybrid type promoter","type":"narrow"}],"termid":"GO:0006383","terms_by_termid":{"GO:0006359":null,"GO:0006383":null,"GO:0006384":null,"GO:0006386":null,"GO:0016480":null,"GO:0042791":null,"GO:0042797":null,"GO:0070898":null}}


id: GO:0008158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a member of the hedgehog protein family and transmitting the signal across the membrane to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators","PMID:9278137","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"hedgehog receptor activity","synonyms":[{"name":"patched activity","type":"exact"}],"termid":"GO:0008158"}


id: PBO:0057197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 370","termid":"PBO:0057197"}


id: PBO:0058326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4699","termid":"PBO:0058326"}


id: PBO:0059317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57","termid":"PBO:0059317"}


id: PBO:0077585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomodulin 4","termid":"PBO:0077585"}


id: GO:0032938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation in response to oxidative stress","termid":"GO:0043556"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to oxidative stress","termid":"GO:0032938"}


id: PBO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nifs homolog, possible cysteine desulfurase","termid":"PBO:0000143"}


id: GO:0019897
data:
  {"annotated_genes":["SJAG_02233","SJAG_04026","SJAG_02444","SJAG_02605","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031234"},{"annotations":[105653,93424,108161,106292],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_03081":null,"SJAG_04026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"extrinsic component of plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000157"],"synonyms":[{"name":"extrinsic to plasma membrane","type":"exact"},{"name":"juxtamembrane","type":"broad"},{"name":"peripheral plasma membrane protein","type":"exact"}],"termid":"GO:0019897","terms_by_termid":{"GO:0005834":null,"GO:0031234":null}}


id: PBO:0058325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4698","termid":"PBO:0058325"}


id: PBO:0110979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 molecule (IN blood group)","termid":"PBO:0110979"}


id: GO:0030054
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella.","definition_xrefs":["ISBN:0198506732","PMID:26820516","PMID:28096264","GOC:aruk","GOC:bc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell junction","secondary_identifiers":["Wikipedia:Cell_junction"],"termid":"GO:0030054"}


id: FYPO:0008034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 7 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:32282918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 7 residues during vegetative growth","termid":"FYPO:0008034"}


id: GO:0047940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronate + ATP = 1-phospho-alpha-D-glucuronate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.43","RHEA:17005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronokinase activity","secondary_identifiers":["KEGG_REACTION:R01476","MetaCyc:GLUCURONOKINASE-RXN"],"synonyms":[{"name":"ATP:D-glucuronate 1-phosphotransferase activity","type":"related"},{"name":"glucurono-glucuronokinase activity","type":"related"},{"name":"glucuronokinase (phosphorylating)","type":"related"}],"termid":"GO:0047940"}


id: GO:0050488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ecdysteroid = UDP + glucosyl-ecdysteroid.","definition_xrefs":["PMID:10073711","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"ecdysteroid UDP-glucosyltransferase activity","secondary_identifiers":["GO:0050489"],"synonyms":[{"name":"ecdysteroid UDP-glucosyl/UDP-glucuronosyl transferase activity","type":"related"}],"termid":"GO:0050488"}


id: PBO:0044479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 21 subfamily A member 2","termid":"PBO:0044479"}


id: PBO:0076793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEDC2 antisense RNA 1","termid":"PBO:0076793"}


id: MONDO:0859264
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86066],"is_not":false,"summary":null,"term":"MONDO:0859264"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462881","OMIM:619967","UMLS:C3151531"],"termid":"MONDO:0859264","terms_by_termid":{"MONDO:0859264":null},"xrefs":{"Monarch":{"xref_id":"0859264"}}}


id: FYPO:0006892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which inositol hexakisphosphate kinase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished inositol hexakisphosphate kinase activity","synonyms":[{"name":"inositol hexakisphosphate kinase activity abolished","type":"exact"}],"termid":"FYPO:0006892"}


id: GO:0008623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals, Isw2 in S. cerevisiae), an ACF1 homolog, and additional small histone fold subunits (generally two of these, but Xenopus has only one and some additional non-conserved subunits). CHRAC plays roles in the regulation of RNA polymerase II transcription and in DNA replication and repair.","definition_xrefs":["PMID:16568949","GOC:krc","PMID:21810179","PMID:15284901","GOC:bf","PMID:9252192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"CHRAC","secondary_identifiers":["GO:0016588"],"synonyms":[{"name":"ISW2 complex","type":"narrow"},{"name":"chromatin accessibility complex","type":"exact"}],"termid":"GO:0008623"}


id: GO:0110063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the angiotensin-activated signaling pathway.","definition_xrefs":["GOC:lf","PMID:28784619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of angiotensin-activated signaling pathway","termid":"GO:0110061"},{"relation_name":"positively_regulates","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of angiotensin-activated signaling pathway","termid":"GO:0110063"}


id: GO:0033958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of DNA and polynucleotides, releasing free hypoxanthine.","definition_xrefs":["EC:3.2.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA-deoxyinosine glycosylase activity","secondary_identifiers":["MetaCyc:3.2.2.15-RXN"],"synonyms":[{"name":"DNA(hypoxanthine) glycohydrolase activity","type":"related"},{"name":"DNA-deoxyinosine deoxyribohydrolase activity","type":"related"},{"name":"DNA-deoxyinosine glycosidase activity","type":"related"},{"name":"deoxyribonucleic acid glycosylase activity","type":"related"},{"name":"hypoxanthine-DNA glycosylase activity","type":"related"}],"termid":"GO:0033958"}


id: PBO:0042394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD302 molecule","termid":"PBO:0042394"}


id: MONDO:1011932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent inflammatory pulmonary disease, non-human animal","secondary_identifiers":["OMIA:002205"],"termid":"MONDO:1011932","xrefs":{"Monarch":{"xref_id":"1011932"}}}


id: MOD:00869
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-alanine.","definition_xrefs":["RESID:AA0001#ASP","PubMed:17138938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine residue","termid":"MOD:00010"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine residue (Asp)","synonyms":[{"name":"(2S)-2-aminopropanoic acid","type":"exact"},{"name":"2-aminopropionic acid","type":"exact"},{"name":"2-azanylpropanoic acid","type":"exact"},{"name":"Asp(Ala)","type":"exact"},{"name":"L-alanine","type":"exact"},{"name":"MOD_RES Beta-decarboxylated aspartate","type":"exact"},{"name":"alpha-alanine","type":"exact"},{"name":"alpha-aminopropionic acid","type":"exact"}],"termid":"MOD:00869"}


id: PBO:0053595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 622","termid":"PBO:0053595"}


id: PBO:0043257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 15","termid":"PBO:0043257"}


id: MONDO:0005245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular seminoma (obsolete MONDO:0005245)","synonyms":[{"name":"obsolete testicular seminoma (disease)","type":"exact"}],"termid":"MONDO:0005245","xrefs":{"Monarch":{"xref_id":"0005245"}}}


id: MONDO:0024294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skin diseases caused by bacteria, fungi, parasites, or viruses.","definition_xrefs":["MESH:D012874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin disorder caused by infection","synonyms":[{"name":"disease, infectious skin","type":"related"},{"name":"diseases, infectious skin","type":"related"},{"name":"infectious skin disease","type":"related"},{"name":"infectious skin diseases","type":"related"},{"name":"skin disease, infectious","type":"related"}],"termid":"MONDO:0024294","xrefs":{"Monarch":{"xref_id":"0024294"}}}


id: PBO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"identified in S. pombe only","termid":"PBO:0000067"}


id: PBO:0013026
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CMD1","termid":"PBO:0013026"}


id: PBO:0042743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein Q","termid":"PBO:0042743"}


id: FYECO:0000379
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which diuron was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ diuron","synonyms":[{"name":"+ 3-(3,4-dichlorophenyl)-1,1-dimethylurea","type":"exact"},{"name":"+ DCMU","type":"exact"},{"name":"+ respiratory chain inhibitor","type":"related"}],"termid":"FYECO:0000379"}


id: PBO:0084904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial type 2C protein phosphatase (PP2C); has similarity to mammalian PP1Ks; involved in mitophagy; null mutant is sensitive to rapamycin and has decreased phosphorylation of the Pda1 subunit of pyruvate dehydrogenase","termid":"PBO:0084904"}


id: PBO:0060530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 8 (putative)","termid":"PBO:0060530"}


id: PBO:0016894
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lammer Kinase Homolog","termid":"PBO:0016894"}


id: PBO:0057804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3126","termid":"PBO:0057804"}


id: GO:0031441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA 3'-end processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-end processing","termid":"GO:0031440"},{"relation_name":"is_a","term_name":"negative regulation of mRNA processing","termid":"GO:0050686"},{"relation_name":"negatively_regulates","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA 3'-end processing","synonyms":[{"name":"down regulation of mRNA 3'-end processing","type":"exact"},{"name":"down-regulation of mRNA 3'-end processing","type":"exact"},{"name":"downregulation of mRNA 3'-end processing","type":"exact"},{"name":"inhibition of mRNA 3'-end processing","type":"narrow"}],"termid":"GO:0031441"}


id: PBO:0089362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase","termid":"PBO:0089362"}


id: MOD:01879
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, an L-arginine residue, an L-threonine residue and a copper atom to the methanobactin SB2 copper complex.","definition_xrefs":["PubMed:20961038","RESID:AA0555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"methanobactin SB2 copper complex","synonyms":[{"name":"METAL copper [Cu-methanobactin SB2 complex]","type":"exact"},{"name":"[5-(hydroxy[sulfanyl-kappaS]methylene)-3,5-dihydro-4H-imidazol-4-onato-kappaN1][4-(hydroxy[sulfanyl-kappaS]methylene)-1,3-oxazol-5(4H)-onato-kappaN]copper","type":"exact"},{"name":"methanobactin SB2 copper complex","type":"exact"}],"termid":"MOD:01879"}


id: PBO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.11","termid":"PBO:0002301"}


id: GO:1904803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of translation that is involved in cellular response to UV.","definition_xrefs":["GOC:TermGenie","PMID:17369398","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"part_of","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation involved in cellular response to UV","synonyms":[{"name":"regulation of protein anabolism involved in cellular response to UV","type":"exact"},{"name":"regulation of protein biosynthesis involved in cellular response to UV","type":"exact"},{"name":"regulation of protein formation involved in cellular response to UV","type":"exact"},{"name":"regulation of protein synthesis involved in cellular response to UV","type":"exact"},{"name":"regulation of translation involved in cellular response to UV light stimulus","type":"exact"},{"name":"regulation of translation involved in cellular response to UV radiation stimulus","type":"exact"},{"name":"regulation of translation involved in cellular response to ultraviolet light stimulus","type":"exact"},{"name":"regulation of translation involved in cellular response to ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:1904803"}


id: GO:0008914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-leucyl-tRNA(Leu) + N-terminal L-arginyl-[protein] = H+ + N-terminal L-leucyl-L-arginyl-[protein] + tRNA(Leu). Can also transfer the leucyl residue on an N-terminal L-lysyl residue.","definition_xrefs":["EC:2.3.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"leucyl-tRNA--protein transferase activity","secondary_identifiers":["MetaCyc:LEUCYLTRANSFERASE-RXN"],"synonyms":[{"name":"L/F transferase activity","type":"related"},{"name":"leucyl-phenylalanine-transfer ribonucleate-protein aminoacyltransferase activity","type":"related"},{"name":"leucyl-phenylalanine-transfer ribonucleate-protein transferase activity","type":"related"},{"name":"leucyltransferase activity","type":"related"}],"termid":"GO:0008914"}


id: FYPO:0001601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"abnormal vacuole","termid":"FYPO:0002794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered level of substance in vacuole","synonyms":[{"name":"abnormal level of substance in vacuole","type":"exact"},{"name":"abnormal level of substance in vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar level of substance","type":"exact"},{"name":"altered level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"altered vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001601"}


id: MONDO:0011758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hurler syndrome is the most severe form of mucopolysaccharidosis type 1 (MPS1), a rare lysosomal storage disease, characterized by skeletal abnormalities, cognitive impairment, heart disease, respiratory problems, enlarged liver and spleen, characteristic facies and reduced life expectancy.","definition_xrefs":["Orphanet:93473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 1","termid":"MONDO:0001586"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005267","MONDO:0005328","MONDO:0002561"],"is_obsolete":false,"name":"Hurler syndrome","secondary_identifiers":["SCTID:65327002","UMLS:C0086795","DOID:0111390","NANDO:1200094","NANDO:2201168","NCIT:C61261","GARD:12559","OMIM:607014","MEDGEN:39698"],"synonyms":[{"name":"Hurler disease","type":"exact"},{"name":"Hurler syndrome","type":"exact"},{"name":"MPS I H","type":"exact"},{"name":"MPS1-H","type":"related"},{"name":"MPS1H","type":"exact"},{"name":"MPSIH","type":"exact"},{"name":"mucopolysaccharidosis IH","type":"related"},{"name":"mucopolysaccharidosis type 1H","type":"exact"},{"name":"mucopolysaccharidosis type IH","type":"exact"}],"termid":"MONDO:0011758","xrefs":{"Monarch":{"xref_id":"0011758"}}}


id: PBO:0057534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 650","termid":"PBO:0057534"}


id: PBO:0029240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_telomeric_heterochromatin_during_vegetative_growth","termid":"PBO:0029240"}


id: MONDO:0020512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"precursor T-cell acute lymphoblastic leukemia","secondary_identifiers":["Orphanet:99861","icd11.foundation:803161771","GARD:19694","EFO:1001830"],"synonyms":[{"name":"T-ALL","type":"broad"},{"name":"precursor T-cell acute lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukaemia","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukemia","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukemia/lymphoma","type":"exact"}],"termid":"MONDO:0020512","xrefs":{"Monarch":{"xref_id":"0020512"}}}


id: PBO:0085059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi","termid":"PBO:0085059"}


id: PBO:0042377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD207 molecule","termid":"PBO:0042377"}


id: MOD:00020
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-leucine.","definition_xrefs":["PubMed:6692818","RESID:AA0011","DeltaMass:0","ChEBI:30006","PubMed:11478885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine residue","synonyms":[{"name":"(2S)-2-amino-4-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-4-methylpentanoic acid","type":"exact"},{"name":"4-methyl-norvaline","type":"exact"},{"name":"L-leucine","type":"exact"},{"name":"Leu","type":"exact"},{"name":"alpha-amino-gamma-methylvaleric acid","type":"exact"},{"name":"alpha-aminoisocaproic acid","type":"exact"}],"termid":"MOD:00020"}


id: PBO:0031480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_actin_cortical_patch","termid":"PBO:0031480"}


id: GO:0018335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein by the addition of a succinyl group (CO-CH2-CH2-CO) to an amino acid residue.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein succinylation","synonyms":[{"name":"protein amino acid succinylation","type":"exact"}],"termid":"GO:0018335"}


id: PBO:0080464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1","termid":"PBO:0080464"}


id: PBO:0085323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol-4-kinase; functions in Pkc1p protein kinase pathway; required for normal vacuole morphology, cell wall integrity, and actin cytoskeleton organization; required for autophagosome-vacuole fusion during autophagy and for lipophagy in stationary phase cells and during nitrogen starvation; localizes to plasma membrane and mitochondria in HTP studies","termid":"PBO:0085323"}


id: GO:0048845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of venous blood vessels are generated and organized. Veins are blood vessels that transport blood from the body and its organs to the heart.","definition_xrefs":["GOC:dsf","PMID:16740480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"part_of","term_name":"venous blood vessel development","termid":"GO:0060841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous blood vessel morphogenesis","synonyms":[{"name":"vein morphogenesis","type":"broad"},{"name":"venous morphogenesis","type":"exact"}],"termid":"GO:0048845"}


id: PBO:0078172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-3","termid":"PBO:0078172"}


id: PBO:0060773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B7","termid":"PBO:0060773"}


id: GO:0016163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16 ATP + 16 H2O + N2 + 8 reduced [2Fe-2S]-[ferredoxin] = 16 ADP + 6 H+ + H2 + 2 NH4+ + 8 oxidized [2Fe-2S]-[ferredoxin] + 16 phosphate.","definition_xrefs":["RHEA:21448","PMID:15382920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor","termid":"GO:0016732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1810","MetaCyc:NITROGENASE-RXN","EC:1.18.6.1"],"synonyms":[{"name":"iron-iron nitrogenase activity","type":"narrow"},{"name":"molybdenum-iron nitrogenase activity","type":"narrow"},{"name":"reduced ferredoxin:dinitrogen oxidoreductase (ATP-hydrolysing) activity","type":"related"},{"name":"vanadium-iron nitrogenase activity","type":"narrow"}],"termid":"GO:0016163"}


id: GO:0046160
data:
  {"annotated_genes":["SJAG_03173","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108679,92389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme a, a derivative of heme found in cytochrome aa3.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03173":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme a metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"haem a metabolic process","type":"exact"},{"name":"haem a metabolism","type":"exact"},{"name":"heme a metabolism","type":"exact"}],"termid":"GO:0046160","terms_by_termid":{"GO:0006784":null}}


id: PBO:0049488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.10 linker histone","termid":"PBO:0049488"}


id: PBO:0052166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 14","termid":"PBO:0052166"}


id: PBO:0049277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSN antisense RNA 1","termid":"PBO:0049277"}


id: GO:0034255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving urea.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"regulates","term_name":"urea metabolic process","termid":"GO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0071941","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of urea metabolic process","synonyms":[{"name":"regulation of urea metabolism","type":"exact"}],"termid":"GO:0034255"}


id: PBO:0038750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR1A pseudogene 1","termid":"PBO:0038750"}


id: PBO:0110410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC39A1 pseudogene 1","termid":"PBO:0110410"}


id: MONDO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder cancer","termid":"MONDO:0001187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urinary bladder posterior wall cancer","secondary_identifiers":["UMLS:C0153612","DOID:11811","MEDGEN:509340","SCTID:188243001","ICD9:188.4"],"synonyms":[{"name":"malignant neoplasm of posterior wall of urinary bladder","type":"exact"}],"termid":"MONDO:0001373","xrefs":{"Monarch":{"xref_id":"0001373"}}}


id: PR:O13929
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A programmed cell death protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00414","PANTHER:PTHR10840:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C4.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.09c","secondary_identifiers":["UniProtKB:O13929"],"synonyms":[{"name":"Spom972h-PDCD5","type":"exact"}],"termid":"PR:O13929"}


id: MONDO:0007205
data:
  {"annotated_genes":["SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86015],"is_not":false,"summary":null,"term":"MONDO:0007205"}]},"cv_name":"mondo","definition":"Diaphyseal medullary stenosis with malignant fibrous histiocytoma is a very rare autosomal dominant bone dysplasia/cancer syndrome characterized clinically by bone infarctions, cortical growth abnormalities, pathological fractures, and development of bone sarcoma (malignant fibrous histiocytoma).","definition_xrefs":["Orphanet:85182"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"disorder of polyamine metabolism","termid":"MONDO:0800159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"diaphyseal medullary stenosis-bone malignancy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:350613","OMIM:112250","UMLS:C1862177","DOID:0080664","GARD:10072","NCIT:C122660"],"synonyms":[{"name":"BDMF","type":"related"},{"name":"DMS-MFH","type":"exact"},{"name":"DMSMFH","type":"related"},{"name":"Hardcastle syndrome","type":"exact"},{"name":"Hardcastle's syndrome","type":"exact"},{"name":"bone dysplasia with malignant fibrous histiocytoma","type":"related"},{"name":"bone dysplasia with medullary fibrosarcoma","type":"related"},{"name":"bone dysplasia-medullary fibrosarcoma syndrome","type":"exact"},{"name":"diaphyseal medullary stenosis with malignant fibrous histiocytoma","type":"related"},{"name":"diaphyseal medullary stenosis-bone malignancy syndrome","type":"exact"},{"name":"diaphyseal medullary stenosis-malignant fibrous histiocytoma syndrome","type":"exact"},{"name":"myopathy, limb-girdle, with bone fragility","type":"related"}],"termid":"MONDO:0007205","terms_by_termid":{"MONDO:0007205":null},"xrefs":{"Monarch":{"xref_id":"0007205"}}}


id: MOD:00552
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 4x(2)H labeled dimethylated residue.","definition_xrefs":["Unimod:199","PubMed:14670044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(2)H labeled dimethylated residue","synonyms":[{"name":"DiMethyl-CHD2","type":"related"},{"name":"Dimethyl:2H(4)","type":"related"}],"termid":"MOD:00552"}


