# terms

id: MONDO:0021089
data:
  {"annotated_genes":["SJAG_01671","SJAG_01895","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[84859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[85068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"Malignant growth of cells in the peripheral nervous system (PNS)or Autonomic Nervous System (ANS), without specification as to location","definition_xrefs":["NCIT:C4961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"},{"relation_name":"is_a","term_name":"nervous system cancer","termid":"MONDO:0005872"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral nervous system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:155556","ICD9:171.9","UMLS:C0751428","SCTID:254986007"],"synonyms":[{"name":"cancer of peripheral nervous system","type":"exact"},{"name":"malignant PNS neoplasm","type":"exact"},{"name":"malignant PNS tumor","type":"exact"},{"name":"malignant PNS tumour","type":"exact"},{"name":"malignant neoplasm of PNS","type":"exact"},{"name":"malignant neoplasm of peripheral nerve","type":"exact"},{"name":"malignant neoplasm of peripheral nervous system","type":"exact"},{"name":"malignant neoplasm of the PNS","type":"exact"},{"name":"malignant neoplasm of the peripheral nerve","type":"exact"},{"name":"malignant neoplasm of the peripheral nervous system","type":"exact"},{"name":"malignant neoplasms, peripheral nerve","type":"exact"},{"name":"malignant peripheral nerve neoplasm","type":"exact"},{"name":"malignant peripheral nerve tumor","type":"exact"},{"name":"malignant peripheral nerve tumour","type":"exact"},{"name":"malignant peripheral nervous system neoplasm","type":"exact"},{"name":"malignant peripheral nervous system tumor","type":"exact"},{"name":"malignant peripheral nervous system tumour","type":"exact"},{"name":"malignant tumor of PNS","type":"exact"},{"name":"malignant tumor of peripheral nerve","type":"exact"},{"name":"malignant tumor of peripheral nervous system","type":"exact"},{"name":"malignant tumor of the PNS","type":"exact"},{"name":"malignant tumor of the peripheral nerve","type":"exact"},{"name":"malignant tumor of the peripheral nervous system","type":"exact"},{"name":"malignant tumour of PNS","type":"exact"},{"name":"malignant tumour of peripheral nerve","type":"exact"},{"name":"malignant tumour of peripheral nervous system","type":"exact"},{"name":"malignant tumour of the PNS","type":"exact"},{"name":"malignant tumour of the peripheral nerve","type":"exact"},{"name":"malignant tumour of the peripheral nervous system","type":"exact"},{"name":"peripheral nervous system cancer","type":"exact"},{"name":"peripheral nervous system neoplasms, malignant","type":"exact"}],"termid":"MONDO:0021089","terms_by_termid":{"MONDO:0007273":null,"MONDO:0011121":null,"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0021089"}}}


id: MONDO:0035734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema with normal C1inh not related to F12 or PLG variant","secondary_identifiers":["MEDGEN:1843147","UMLS:C5681601","GARD:22406","Orphanet:599418"],"termid":"MONDO:0035734","xrefs":{"Monarch":{"xref_id":"0035734"}}}


id: GO:0035487
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97380],"is_not":false,"summary":null,"term":"GO:0035487"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a T/T mispair.","definition_xrefs":["GOC:bf","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"thymine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"T/T mispair binding","type":"exact"}],"termid":"GO:0035487","terms_by_termid":{"GO:0035487":null}}


id: MONDO:0017032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary interstitial lung disease in childhood and adulthood due to alveolar structure disorder (obsolete MONDO:0017032)","secondary_identifiers":["Orphanet:264930"],"synonyms":[{"name":"primary ILD in childhood and adulthood due to alveolar structure disorder","type":"exact"}],"termid":"MONDO:0017032","xrefs":{"Monarch":{"xref_id":"0017032"}}}


id: PR:O74801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2D10.08c gene.","definition_xrefs":["UniProtKB:O74801","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein yml6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.08c","synonyms":[{"name":"Spom972h-SPBC2D10.08c","type":"exact"}],"termid":"PR:O74801"}


id: PR:O14349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30D10.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP-specific 5'-nucleotidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.03c","synonyms":[{"name":"Spom972h-SPBC30D10.03c","type":"exact"}],"termid":"PR:O14349"}


id: PBO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 19","termid":"PBO:0045829"}


id: MONDO:1012863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative brain disorder with mitochondrial dysfunction, amyloid-β accumulation, and lethal epilepsy that occurs in dogs due to a mutation in the PITRM1 gene.","definition_xrefs":["PMID:33835239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, dog","termid":"MONDO:1010411"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, mitochondrial dysfunction and neurodegeneration, PITRM1-related, dog","secondary_identifiers":["OMIA:002324-9615"],"termid":"MONDO:1012863","xrefs":{"Monarch":{"xref_id":"1012863"}}}


id: PBO:0066581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD9-HUS1-RAD1 interacting nuclear orphan 1","termid":"PBO:0066581"}


id: GO:0042270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of protecting a cell from natural killer cell mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protection from natural killer cell mediated cytotoxicity","synonyms":[{"name":"protection from NK cell mediated cell death","type":"exact"},{"name":"protection from NK cell mediated cell killing","type":"exact"},{"name":"protection from NK cell mediated cytolysis","type":"related"},{"name":"protection from NK cell mediated cytotoxicity","type":"exact"},{"name":"protection from natural killer cell mediated cell death","type":"exact"},{"name":"protection from natural killer cell mediated cell killing","type":"exact"},{"name":"protection from natural killer cell mediated cytolysis","type":"related"}],"termid":"GO:0042270"}


id: PBO:0030532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_morphology","termid":"PBO:0030532"}


id: PBO:0085347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; required for efficient acyl chain remodeling of newly synthesized phosphatidylethanolamine-derived phosphatidylcholine; required for deacylation of phosphatidylcholine and phosphatidylethanolamine but not phosphatidylinositol; PLB1 has a paralog, PLB3, that arose from the whole genome duplication","termid":"PBO:0085347"}


id: PBO:0052401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 2","termid":"PBO:0052401"}


id: GO:1901218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of holin activity.","definition_xrefs":["GOC:TermGenie","GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of holin activity (obsolete GO:1901218)","synonyms":[{"name":"antiholin activity","type":"exact"},{"name":"down regulation of holin activity","type":"exact"},{"name":"down-regulation of holin activity","type":"exact"},{"name":"downregulation of holin activity","type":"exact"},{"name":"inhibition of holin activity","type":"narrow"},{"name":"phage antiholin","type":"narrow"}],"termid":"GO:1901218"}


id: PBO:0041854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 2","termid":"PBO:0041854"}


id: PBO:0045003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIM1 rRNA methyltransferase and ribosome maturation factor","termid":"PBO:0045003"}


id: PBO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_more_or_fewer_than_four_spores","termid":"PBO:0030004"}


id: GO:0008161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamate resistance (obsolete GO:0008161)","synonyms":[{"name":"carbamate resistance","type":"exact"}],"termid":"GO:0008161"}


id: PBO:0076961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 3 like","termid":"PBO:0076961"}


id: PBO:0049384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 6","termid":"PBO:0049384"}


id: MONDO:0014896
data:
  {"annotated_genes":["SJAG_02096"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85357],"is_not":false,"summary":null,"term":"MONDO:0014896"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy-respiratory failure-skin abnormalities-joint hyperlaxity syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:486815","UMLS:C4310736","MEDGEN:934703","GARD:17883","OMIM:617066"],"synonyms":[{"name":"MDCDC","type":"exact"},{"name":"congenital muscular dystrophy, Davignon-Chauveau type","type":"exact"},{"name":"muscular dystrophy, congenital, Davignon-Chauveau type","type":"exact"}],"termid":"MONDO:0014896","terms_by_termid":{"MONDO:0014896":null},"xrefs":{"Monarch":{"xref_id":"0014896"}}}


id: PBO:0064937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic polypeptide","termid":"PBO:0064937"}


id: PBO:0057724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-9","termid":"PBO:0057724"}


id: GO:0035115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"},{"relation_name":"is_a","term_name":"forelimb morphogenesis","termid":"GO:0035136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic forelimb morphogenesis","secondary_identifiers":["GO:0035117"],"synonyms":[{"name":"embryonic arm morphogenesis","type":"narrow"}],"termid":"GO:0035115"}


id: PBO:0081714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 639","termid":"PBO:0081714"}


id: MONDO:0007723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing Hirschsprung disease in which the cause of the disease is a mutation in the RET gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 1","secondary_identifiers":["UMLS:C3888239","MEDGEN:854827","OMIM:142623"],"synonyms":[{"name":"HSCR1","type":"exact"},{"name":"Hirschsprung disease","type":"broad"},{"name":"Hirschsprung disease caused by mutation in RET","type":"exact"},{"name":"Hirschsprung disease, protection against","type":"related"},{"name":"Hirschsprung disease, susceptibility to, 1","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, type 1","type":"exact"},{"name":"RET Hirschsprung disease","type":"exact"},{"name":"aganglionic megacolon","type":"broad"},{"name":"megacolon, aganglionic","type":"broad"},{"name":"susceptibility to Hirschsprung disease 1","type":"exact"}],"termid":"MONDO:0007723","xrefs":{"Monarch":{"xref_id":"0007723"}}}


id: PBO:0038667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 3","termid":"PBO:0038667"}


id: PBO:0036152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_iMTOC","termid":"PBO:0036152"}


id: GO:0019848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to inhibit neural function in another organism by inhibiting voltage-gated calcium ion channels and neurotransmitter release. This function is thought to be specific to the venom of two marine snail species.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete conotoxin activity (obsolete GO:0019848)","synonyms":[{"name":"conotoxin activity","type":"exact"}],"termid":"GO:0019848"}


id: GO:0072527
data:
  {"annotated_genes":["SJAG_04713","SJAG_00197","SJAG_03213","SJAG_02047","SJAG_00964","SJAG_05024","SJAG_00694","SJAG_04067","SJAG_03164","SJAG_01673","SJAG_04866","SJAG_02593","SJAG_02887","SJAG_02874","SJAG_00444","SJAG_04627","SJAG_04712","SJAG_00381","SJAG_04665","SJAG_04657","SJAG_02420","SJAG_00827","SJAG_01970","SJAG_03708","SJAG_03362","SJAG_01742","SJAG_02421","SJAG_04354","SJAG_00885","SJAG_03676","SJAG_03771","SJAG_04264","SJAG_04709","SJAG_05029","SJAG_04487","SJAG_00957","SJAG_04282","SJAG_00392","SJAG_00779","SJAG_02406","SJAG_03538","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[115851,111053,97695,92612,114710,86997,110217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[92613,88659,111054,115852,97696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[114711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[91638,106418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[67423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[99258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[113087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[92168,114046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[88402,107530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[91639,106419,94683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[117149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[88584,107531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[91640,117150,88585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[117151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[107532,98185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[98186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[87666],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903931"},{"annotations":[88246,112813],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[88660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019856"},{"annotations":[93556,86679,88403,114047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006206"},{"annotations":[89863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[104657,106423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006213"},{"annotations":[96930,112947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[111055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[87661,89864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008655"},{"annotations":[112726,113139,115154,98717,93491,112720,106536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[113140,112727,93492,115155,98718,112721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[65574,58812,98719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[109591,109592,98720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[114712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[113089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"},{"annotations":[114048,86680,87662,92169,91169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[91170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"},{"annotations":[99260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyrimidine-containing compound, i.e. any compound that contains pyrimidine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic 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id: PBO:0028691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_organization","termid":"PBO:0028691"}


id: FYPO:0004778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of farnesyltranstransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal farnesyltranstransferase activity","termid":"FYPO:0004777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased farnesyltranstransferase activity","synonyms":[{"name":"reduced farnesyltranstransferase activity","type":"exact"}],"termid":"FYPO:0004778"}


id: MONDO:1011518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen storage disease that occurs in ring-tailed coati.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease, ring-tailed coati","secondary_identifiers":["OMIA:001883-9651"],"termid":"MONDO:1011518","xrefs":{"Monarch":{"xref_id":"1011518"}}}


id: GO:0140507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals induced by granzymes which triggers the cell death of a cell. The pathway starts with reception of a granzyme signal, and ends when the execution phase of cell death is triggered. Granzymes are serine proteases that are secreted by cytotoxic T cells and natural killer cells to induce cell death in target cells.","definition_xrefs":["PMID:32299851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"granzyme-mediated programmed cell death signaling pathway","synonyms":[{"name":"granzyme-mediated cell death signaling pathway","type":"broad"}],"termid":"GO:0140507"}


id: PBO:0084900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transporter repressible by thiamine; THI74 has a paralog, YML018C, that arose from the whole genome duplication; shows sequence homology to human gene SLC35F3, a thiamine transporter implicated in hypertension","termid":"PBO:0084900"}


id: PBO:0087671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Isw1a complex; Isw1a has nucleosome-stimulated ATPase activity and represses transcription initiation by specific positioning of a promoter proximal dinucleosome; promotes nucleosome shifts in the 5 prime direction; IOC3 has a paralog, ESC8, that arose from the whole genome duplication","termid":"PBO:0087671"}


id: PBO:0002984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease Isp5","termid":"PBO:0002984"}


id: MONDO:0700011
data:
  {"annotated_genes":["SJAG_01806"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 4 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01806":null},"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700011","terms_by_termid":{"MONDO:0008684":null},"xrefs":{"Monarch":{"xref_id":"0700011"}}}


id: PBO:0013022
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DHODH","termid":"PBO:0013022"}


id: PBO:0053465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 427","termid":"PBO:0053465"}


id: PBO:0082069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenylsulfate reductase; reduces 3'-phosphoadenylyl sulfate to adenosine-3',5'-bisphosphate and free sulfite using reduced thioredoxin as cosubstrate, involved in sulfate assimilation and methionine metabolism","termid":"PBO:0082069"}


id: PBO:0044307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 2","termid":"PBO:0044307"}


id: RO:0002521
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is sequentially aligned with if a significant portion bases of x and y correspond in terms of their base type and their relative ordering","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_sequentially_aligned_with","termid":"RO:0002521"}


id: GO:0140953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl27-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a single methyl group to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me.","definition_xrefs":["RHEA:60296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008276","GO:0140096","GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H3K27 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.369"],"synonyms":[{"name":"histone H3-K27 methylation","type":"broad"},{"name":"histone H3-K27 monomethylase activity","type":"exact"},{"name":"histone H3K27 methylation","type":"broad"},{"name":"histone H3K27 monomethylase activity","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140953"}


id: PBO:0011433
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus SJAG_03327","termid":"PBO:0011433"}


id: GO:0052521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont phagocytosis (obsolete GO:0052521)","synonyms":[{"name":"activation by host of symbiont phagocytosis","type":"narrow"},{"name":"stimulation by host of symbiont phagocytosis","type":"narrow"},{"name":"up regulation by host of symbiont phagocytosis","type":"exact"},{"name":"up-regulation by host of symbiont phagocytosis","type":"exact"},{"name":"upregulation by host of symbiont phagocytosis","type":"exact"}],"termid":"GO:0052521"}


id: PBO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chs five related protein Cfr1","termid":"PBO:0001977"}


id: PBO:0082064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-ketoacyl-CoA thiolase with broad chain length specificity; cleaves 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA during beta-oxidation of fatty acids","termid":"PBO:0082064"}


id: _global:variant_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A' is a variant (mutation) of A = definition every instance of A' is either an immediate mutation of some instance of A, or there is a chain of immediate mutation processes linking A' to some instance of A.","definition_xrefs":["SO:immuno_workshop"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_of","termid":"_global:variant_of"}


id: PBO:0028253
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_kinase_activity_during_mitotic_G1_phase","termid":"PBO:0028253"}


id: PATO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of physical entities inhering in a bearer by virtue of the bearer's lacking a physical part as specified by the additional entity.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacks parts or has fewer parts of type","termid":"PATO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks all parts of type","secondary_identifiers":["OBO_REL:lacks_part","PATO:0001557"],"synonyms":[{"name":"lacks all physical parts of type","type":"exact"}],"termid":"PATO:0002000"}


id: GO:0090171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a chondrocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a chondrocyte.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte morphogenesis","termid":"GO:0090171"}


id: GO:0039011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron proximal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"part_of","term_name":"pronephric proximal tubule development","termid":"GO:0035776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule morphogenesis","synonyms":[{"name":"pronephros proximal tubule morphogenesis","type":"exact"}],"termid":"GO:0039011"}


id: GO:0060294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Movement of cilia mediated by motor proteins that contributes to the movement of a cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium movement","termid":"GO:0003341"},{"relation_name":"part_of","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium movement involved in cell motility","termid":"GO:0060294"}


id: FYECO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to stationary phase.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase","termid":"FYECO:0000123"}


id: GO:0140489
data:
  {"annotated_genes":["SJAG_00856","SJAG_01756","SJAG_01215","SJAG_03835","SJAG_02886","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105610,99273,108765,109728,116323,108008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140490"}]},"cv_name":"molecular_function","definition":"The action of a molecule that provides a shape or a sequence mimicking or complementary to the final product, providing template for copying the original molecule's shape or sequence.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02886":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular template activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140489","terms_by_termid":{"GO:0140490":null}}


id: PBO:0084852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; located in close proximity to the polypeptide exit channel of the ribosome; mutations in human homolog MRPL44 cause childhood cardiomyopathy; human MRPL44 deficiency results in inefficient assembly of the mitochondrial ribosome, and in tissue-specific respiratory chain deficiency, manifesting as either Complex I+Complex IV or Complex IV deficiency, depending on a cell type","termid":"PBO:0084852"}


id: PBO:0113261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal protein of unknown function; last 10 C-terminal amino acids contains a novel PTS1 motif, both necessary and sufficient for Pex5p-dependent peroxisomal targeting; also localizes to the nucleus; PXP3 is not an essential gene","termid":"PBO:0113261"}


id: GO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any collagen trimer that passes through a lipid bilayer membrane.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transmembrane collagen trimer","synonyms":[{"name":"MACIT","type":"exact"}],"termid":"GO:0030936"}


id: PBO:0089745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Mpp10","termid":"PBO:0089745"}


id: GO:0010086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryonic root are generated and organized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic root morphogenesis","termid":"GO:0010086"}


id: PBO:0036445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 Atg8 and Atg12 E1 activating enzyme Atg7","termid":"PBO:0036445"}


id: MONDO:0858990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive spastic paraplegia type 85 (obsolete MONDO:0858990)","termid":"MONDO:0858990","xrefs":{"Monarch":{"xref_id":"0858990"}}}


id: PBO:0064391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 13","termid":"PBO:0064391"}


id: GO:0006410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cellular synthesis of DNA on a template of RNA.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription, RNA-dependent (obsolete GO:0006410)","synonyms":[{"name":"transcription, RNA-dependent","type":"exact"}],"termid":"GO:0006410"}


id: MONDO:0021535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade well differentiated tumor with neuroendocrine differentiation that arises from the pancreas. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal or less than 2%.","definition_xrefs":["NCIT:C95584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:459467","SCTID:254613007","UMLS:C2987241"],"synonyms":[{"name":"grade 1 neuroendocrine neoplasm of pancreas","type":"exact"},{"name":"pancreas NET G1","type":"exact"},{"name":"pancreas carcinoid tumor","type":"exact"},{"name":"pancreas carcinoid tumour","type":"exact"},{"name":"pancreas neuroendocrine neoplasm G1","type":"exact"},{"name":"pancreas neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"pancreatic NET G1","type":"exact"},{"name":"pancreatic neuroendocrine tumor G1","type":"exact"}],"termid":"MONDO:0021535","xrefs":{"Monarch":{"xref_id":"0021535"}}}


id: PBO:0065839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 4","termid":"PBO:0065839"}


id: PBO:0036410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-adenosyl)-triphosphatase Nit1 (predicted)","termid":"PBO:0036410"}


id: GO:0140885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a type III interferon-mediated signaling in the host organism. Type III interferon is also known as interferon-lambda.","definition_xrefs":["PMID:32464097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","termid":"GO:0140886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host type III interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation by virus of host type III interferon-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by virus of host type III interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0140885"}


id: GO:0046287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoflavonoids, a group of water-soluble phenolic derivatives, isomeric with flavonoids, containing a flavan skeleton. They are differentiated from flavonoids by the point of attachment of the aromatic ring group.","definition_xrefs":["GOC:ai","PMID:15734910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"isoflavonoid metabolic process","synonyms":[{"name":"isoflavonoid metabolism","type":"exact"}],"termid":"GO:0046287"}


id: PBO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR44 family","termid":"PBO:0002044"}


id: PR:Q9Y7J1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.04","synonyms":[{"name":"Spom972h-spo6","type":"exact"}],"termid":"PR:Q9Y7J1"}


id: PBO:0012595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase","termid":"PBO:0012595"}


id: PBO:0059360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 6","termid":"PBO:0059360"}


id: GO:0015371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: galactose(out) + Na+(out) = glucose(in) + Na+(in).","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"galactose:sodium symporter activity","termid":"GO:0015371"}


id: PBO:0113052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Compartment-specific sequestrase chaperone; small heat shock protein (sHSP) with chaperone activity; targets and sequesters proteins to cytoplasmic inclusions (CytoQ);  sumoylated during DNA damage; forms barrel-shaped oligomers that suppress unfolded protein aggregation; involved in cytoskeleton reorganization after heat shock; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress","termid":"PBO:0113052"}


id: PBO:0054751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2161","termid":"PBO:0054751"}


id: PBO:0091583
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RAD1","termid":"PBO:0091583"}


id: GO:0008387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a steroid + AH2 + O2 = 7-alpha-hydroxysteroid + H2O.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"steroid 7-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2A12","type":"narrow"}],"termid":"GO:0008387"}


id: PBO:0113313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113313"}


id: GO:0035447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol-2-(L-cysteinylamido)-2-deoxy-alpha-D-glucopyranoside + acetyl-CoA = mycothiol + coA + H+. Mycothiol is also known as AcCys-GlcN-Ins and 1-D-myo-inosityl-2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside as Cys-GlcN-Ins or desacetylmycothiol.","definition_xrefs":["PMID:12033919","EC:2.3.1.189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"mycothiol synthase activity","secondary_identifiers":["MetaCyc:RXN1G-4","RHEA:26172"],"synonyms":[{"name":"acetyl-CoA:Cys-GlcN-Ins acetyltransferase","type":"exact"}],"termid":"GO:0035447"}


id: GO:0035540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SNARE complex disassembly","termid":"GO:0035495"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of SNARE complex disassembly","termid":"GO:0035540"}


id: PBO:0069056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 302, pseudogene","termid":"PBO:0069056"}


id: GO:0022850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when serotonin has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","PMID:12867984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"serotonin-gated monoatomic cation channel activity","secondary_identifiers":["GO:0005232","Reactome:R-HSA-9648983","Reactome:R-HSA-975311"],"synonyms":[{"name":"5-hydroxytryptamine-gated receptor-channel","type":"narrow"},{"name":"serotonin-activated cation-selective channel activity","type":"exact"},{"name":"serotonin-gated cation channel activity","type":"narrow"},{"name":"serotonin-gated cation-selective channel activity","type":"broad"},{"name":"serotonin-gated monoatomic cation-selective channel activity","type":"exact"}],"termid":"GO:0022850"}


id: SO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases bound to repeating units. The forms found in nature are deoxyribonucleic acid (DNA), where the repeating units are 2-deoxy-D-ribose rings connected to a phosphate backbone, and ribonucleic acid (RNA), where the repeating units are D-ribose rings connected to a phosphate backbone.","definition_xrefs":["CHEBI:33696","RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic_acid","secondary_identifiers":["http://en.wikipedia.org/wiki/Nucleic_acid"],"synonyms":[{"name":"nucleic acid","type":"exact"}],"termid":"SO:0000348"}


id: MONDO:0054771
data:
  {"annotated_genes":["SJAG_04387","SJAG_02509"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85219,85220],"is_not":false,"summary":null,"term":"MONDO:0054771"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617928","MEDGEN:1645093","UMLS:C4693660"],"synonyms":[{"name":"KTCN9","type":"related"},{"name":"keratoconus 9","type":"exact"}],"termid":"MONDO:0054771","terms_by_termid":{"MONDO:0054771":null},"xrefs":{"Monarch":{"xref_id":"0054771"}}}


id: MONDO:0018468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proton-pump inhibitor-responsive esophageal eosinophilia (PPI-REE) is a rare, gastroenterologic disease characterized by typical clinical, endoscopic and histological features of eosinophilic oesophagitis (i.e. symptomatic oesophageal dysfunction associated with eosinophil-predominant mucose infiltrate) which completely remits upon proton pump inhibitor therapy.","definition_xrefs":["Orphanet:411696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic gastrointestinal disease","termid":"MONDO:0018438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"proton-pump inhibitor-responsive esophageal eosinophilia","secondary_identifiers":["GARD:21735","UMLS:C4749332","MEDGEN:1669432"],"synonyms":[{"name":"PPI-REE","type":"exact"},{"name":"PPI-responsive esophageal eosinophilia","type":"exact"},{"name":"PPIRee","type":"exact"}],"termid":"MONDO:0018468","xrefs":{"Monarch":{"xref_id":"0018468"}}}


id: GO:0140813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: urate(out) + anion (in) = urate (in) + anion (out).","definition_xrefs":["PMID:12024214","PMID:18411268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"urate:monoatomic anion antiporter activity","synonyms":[{"name":"urate:anion antiporter activity","type":"broad"},{"name":"urate:organic anion antiporter activity","type":"narrow"}],"termid":"GO:0140813"}


id: PBO:0047168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 1","termid":"PBO:0047168"}


id: PBO:0029013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029013"}


id: PBO:0068240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal pseudogene 2","termid":"PBO:0068240"}


id: MONDO:0005894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic fungal infection caused by Paracoccidioides brasiliensis that is most often seen in immunocompromised patients. It affects the mucous membranes, lymph nodes, lungs and bones.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary systemic mycosis","termid":"MONDO:0000308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracoccidioidomycosis","secondary_identifiers":["NORD:1553","Orphanet:73260","SCTID:36866003","UMLS:C0030409","EFO:0007417","MedDRA:10061906","NCIT:C34891","GARD:7323","MESH:D010229","DOID:12662","ICD10CM:B41","icd11.foundation:268777657","ICD9:116.1","MEDGEN:14601"],"synonyms":[{"name":"Lutz-Splendore-Almeida disease","type":"related"},{"name":"PCM","type":"related"},{"name":"Paracoccidioidal granuloma","type":"related"},{"name":"South American blastomycosis","type":"related"},{"name":"lobo disease","type":"related"},{"name":"mucocutaneous-lymphangitic paracoccidioidomycosis","type":"exact"},{"name":"paracoccidioidal mycosis","type":"exact"}],"termid":"MONDO:0005894","xrefs":{"Monarch":{"xref_id":"0005894"}}}


id: PBO:0091800
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.183","termid":"PBO:0091800"}


id: PATO:0002501
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventral orientation","synonyms":[{"name":"ventrally directed","type":"exact"}],"termid":"PATO:0002501"}


id: GO:0043374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell activation","termid":"GO:0036037"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"CD8-positive, alpha-beta T cell development","type":"related"},{"name":"CD8-positive, alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta T-cell differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043374"}


id: PBO:0042350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD84 molecule","termid":"PBO:0042350"}


id: GO:0098686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the giant synapses that form between the mossy fiber axons of dentate gyrus granule cells and the large complex spines of CA3 pyramidal cells. It consists of a giant bouton known as the mossy fiber expansion, synapsed to the complex, multiheaded spine (thorny excresence) of a CA3 pyramidal cell.","definition_xrefs":["DOI:10.1002/1096-9861","PMID:13869693","PMID:23264762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber to CA3 synapse","termid":"GO:0098686"}


id: GO:0044545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residues at several positions. In human, it contains the catalytic subunit MOF, NSL1/KIAA1267, NSL2/KANSL2, NSL3/KANSL3, MCRS1, PHF20, OGT1, WDR5 and HCF1.","definition_xrefs":["GOC:lb","PMID:20018852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NSL complex","synonyms":[{"name":"non-specific lethal complex","type":"exact"}],"termid":"GO:0044545"}


id: FYPO:0007457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more nuclear envelope than normal during interphase of the mitotic cell cycle. Excess nuclear envelopes may take the form of intranuclear membrane stacks or invaginations, or small cytoplasmic spheres that are attached to the nucleus, have double lipid bilayer membranes, and may contain structures resembling nuclear pores.","definition_xrefs":["PMID:32848252","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excess nuclear envelope present","termid":"FYPO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002403","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"excess nuclear envelope present during mitotic interphase","synonyms":[{"name":"excess nuclear envelope present during interphase of mitotic cell cycle","type":"exact"},{"name":"excess nuclear envelope present during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007457"}


id: MONDO:0013341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methylmalonic aciduria due to transcobalamin receptor defect is a rare metabolite absorption and transport disorder characterized by a moderate increase of methylmalonic acid (MMA) in the blood and urine due to decreased cellular uptake of cobalamin resulting from decreased transcobalamin receptor function. Patients are usually asymptomatic however, screening reveals increased C3-acylcarnitine and MMA in plasma. Serum homocysteine levels may vary from normal to moderately elevated and retinal vascular occlusive disease, resulting in severe visual loss, has been reported.","definition_xrefs":["Orphanet:280183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"methylmalonic acidemia due to transcobalamin receptor defect","secondary_identifiers":["OMIM:613646","GARD:16481","MEDGEN:1670056","UMLS:C4749905","DOID:0060741"],"synonyms":[{"name":"CD320 methylmalonic acidemia","type":"exact"},{"name":"methylmalonic acidemia caused by mutation in CD320","type":"exact"},{"name":"methylmalonic acidemia, TCb1R type","type":"exact"},{"name":"methylmalonic acidemia, TCbIR type","type":"exact"},{"name":"methylmalonic acidemia, Tcblr type","type":"related"},{"name":"methylmalonic aciduria due to transcobalamin receptor defect","type":"exact"},{"name":"methylmalonic aciduria, transient, due to transcobalamin receptor defect","type":"related"}],"termid":"MONDO:0013341","xrefs":{"Monarch":{"xref_id":"0013341"}}}


id: GO:0070767
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains BRCA1 and Rad 51, and is involved in the control of recombination and of genome integrity.","definition_xrefs":["PMID:9008167","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BRCA1-Rad51 complex","termid":"GO:0070767"}


id: PBO:0050086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 6","termid":"PBO:0050086"}


id: PBO:0066646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 4","termid":"PBO:0066646"}


id: GO:0048569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Development, taking place during the post-embryonic phase of an animal tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete post-embryonic animal organ development (obsolete GO:0048569)","synonyms":[{"name":"post-embryonic animal organogenesis","type":"exact"}],"termid":"GO:0048569"}


id: MONDO:0024311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the limb bone.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cancer affecting bone of limb skeleton","secondary_identifiers":["MEDGEN:1843503","UMLS:C0494152","ICD10CM:C40"],"synonyms":[{"name":"cancer of limb bone","type":"exact"},{"name":"limb bone cancer","type":"exact"},{"name":"malignant limb bone neoplasm","type":"exact"},{"name":"malignant neoplasm of limb bone","type":"exact"}],"termid":"MONDO:0024311","xrefs":{"Monarch":{"xref_id":"0024311"}}}


id: PR:Q9URV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sulfiredoxin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02428","PANTHER:PTHR21348:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfiredoxin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.02c","secondary_identifiers":["UniProtKB:Q9URV9"],"synonyms":[{"name":"Spom972h-SRXN1","type":"exact"}],"termid":"PR:Q9URV9"}


id: GO:0103079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-methylthio-2-oxopentanoate + acetyl-CoA + H2O = H+ + 2-(3-methylthiopropyl)malate + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-(3'-methylthio)propylmalate synthase activity (obsolete GO:0103079)","termid":"GO:0103079"}


id: FYPO:0001570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular glutathione level during vegetative growth","synonyms":[{"name":"decreased cellular GSH level during vegetative growth","type":"exact"},{"name":"decreased cellular L-gamma-glutamyl-L-cysteinylglycine level during vegetative growth","type":"exact"},{"name":"decreased cellular glutathione level during mitotic cell cycle","type":"related"},{"name":"decreased cellular reduced glutathione level during vegetative growth","type":"exact"},{"name":"decreased glutathione accumulation during vegetative growth","type":"related"},{"name":"reduced cellular glutathione level during vegetative growth","type":"exact"}],"termid":"FYPO:0001570"}


id: GO:0102007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + an N-acyl-L-homoserine lactone = H+ + an N-acyl-L-homoserine.","definition_xrefs":["EC:3.1.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactonohydrolase activity","termid":"GO:0046573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"acyl-L-homoserine-lactone lactonohydrolase activity","secondary_identifiers":["Reactome:R-HSA-8932633","RHEA:22576","MetaCyc:3.1.1.81-RXN","Reactome:R-HSA-9756136","Reactome:R-HSA-9756150","Reactome:R-HSA-9756177"],"termid":"GO:0102007"}


id: GO:0009643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to light intensity in which exposure to medium-intensity light results in increased tolerance to high-intensity light.","definition_xrefs":["GOC:mah","PMID:11069694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosynthetic acclimation","synonyms":[{"name":"light acclimatization","type":"exact"},{"name":"photoacclimation","type":"exact"}],"termid":"GO:0009643"}


id: GO:0018746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-3,4-oxide + H2O = trans-3,4-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-3,4-epoxide hydrolase activity (obsolete GO:0018746)","termid":"GO:0018746"}


id: PBO:0109041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD reductase Coq12","termid":"PBO:0109041"}


id: FYPO:0005560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are thinner than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PomBase:mah","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"thin stable microtubule bundle","synonyms":[{"name":"decreased stable microtubule bundle thickness","type":"exact"},{"name":"thin Q-MT bundles","type":"exact"},{"name":"thin quiescent cell MT bundle","type":"exact"},{"name":"thin quiescent cell microtubule bundle","type":"exact"},{"name":"thin stable microtubule array","type":"related"},{"name":"thin static microtubule bundle","type":"exact"}],"termid":"FYPO:0005560"}


id: PBO:0031458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_leptomycin_B","termid":"PBO:0031458"}


id: MONDO:0003777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the renal pelvis that involves the transitional epithelium projecting above the surrounding epithelial surface and consisting of villous or arborescent outgrowths of fibrovascular stroma.","definition_xrefs":["NCIT:C4528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal pelvis papillary tumor","termid":"MONDO:0003717"},{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"},{"relation_name":"is_a","term_name":"benign neoplasm of renal pelvis","termid":"MONDO:0021467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal pelvis urothelial papilloma","secondary_identifiers":["DOID:6119","MEDGEN:271479","UMLS:C1514844"],"synonyms":[{"name":"renal pelvis urothelial papilloma","type":"exact"}],"termid":"MONDO:0003777","xrefs":{"Monarch":{"xref_id":"0003777"}}}


id: PBO:0090847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi UDP-galactose transmembrane transporter Gms1","termid":"PBO:0090847"}


id: FYPO:0009021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-cysteine as the nitrogen source.","definition_xrefs":["PMID:34984977","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0001985","FYPO:0002057","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell population growth on cysteine nitrogen source","synonyms":[{"name":"decreased growth on cysteine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on cysteine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with cysteine nitrogen source","type":"related"},{"name":"reduced cell growth on cysteine nitrogen source","type":"related"},{"name":"slow cell growth on cysteine nitrogen source","type":"narrow"}],"termid":"FYPO:0009021"}


id: MONDO:0017679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete obsolete autosomal dominant disease associated with punctate palmoplantar keratoderma as a major feature (obsolete MONDO:0017679)","secondary_identifiers":["Orphanet:308031"],"synonyms":[{"name":"autosomal dominant disease associated with punctate palmoplantar hyperkeratosis as a major feature","type":"exact"}],"termid":"MONDO:0017679","xrefs":{"Monarch":{"xref_id":"0017679"}}}


id: PBO:0054401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1797","termid":"PBO:0054401"}


id: PBO:0076640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein like 2","termid":"PBO:0076640"}


id: PBO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, NIMA related Fin1","termid":"PBO:0000925"}


id: PR:Q9US57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1002.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1002.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","synonyms":[{"name":"Spom972h-SPAC1002.01","type":"exact"}],"termid":"PR:Q9US57"}


id: PBO:0052251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 20","termid":"PBO:0052251"}


id: PBO:0082222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex; ubiquitin-binding adaptor involved in down-regulation of general amino acid transporter Gap1p upon shift to preferred nitrogen source; involved in lactate transporter Jen1p endocytosis; BUL1 has a paralog, BUL2, that arose from the whole genome duplication","termid":"PBO:0082222"}


id: PBO:0058998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA decarboxylase","termid":"PBO:0058998"}


id: PBO:0049598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 1","termid":"PBO:0049598"}


id: PBO:0030198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cytochalasin_B","termid":"PBO:0030198"}


id: GO:0023003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Migration of one of the four nuclei at each pole of the eight-nucleate embryo sac, to the center of the cell.","definition_xrefs":["GOC:mtg_plant","GOC:jid","ISBN:047186840X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo sac nuclear migration","termid":"GO:0009562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nuclear migration to the embryo sac center","synonyms":[{"name":"nuclear migration to the embryo sac centre","type":"exact"},{"name":"nuclear migration to the female gametophyte center","type":"exact"},{"name":"nuclear migration to the female gametophyte centre","type":"exact"},{"name":"nuclear migration to the megagametophyte center","type":"exact"},{"name":"nuclear migration to the megagametophyte centre","type":"exact"},{"name":"nucleus migration to the female gametophyte center","type":"exact"},{"name":"nucleus migration to the female gametophyte centre","type":"exact"}],"termid":"GO:0023003"}


id: FYPO:0005026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased along the chromosome arms.","definition_xrefs":["PMID:21633354","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at chromosome arms","synonyms":[{"name":"increased protein localisation to chromatin at chromosome arms","type":"exact"},{"name":"increased protein localization to chromatin along chromosome arms","type":"exact"},{"name":"increased protein localization to chromatin at chromosome arms during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at chromosome arms during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome arm chromatin","type":"exact"}],"termid":"FYPO:0005026"}


id: MONDO:0017929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital achiasma is a rare, genetic, non-syndromic cranial nerve and nuclear aplasia malformation characterized by the congenital absence of the optic chiasm, resulting from the failure of the optic nerve fibers to cross over and decussate to the contralateral hemisphere, leading to decreased vision, strabismus and congenital nystagmus in infancy.","definition_xrefs":["Orphanet:324353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital achiasma","secondary_identifiers":["ICD10CM:H47.4","SCTID:734031008","GARD:21438","UMLS:C4518345","MEDGEN:1392790"],"termid":"MONDO:0017929","xrefs":{"Monarch":{"xref_id":"0017929"}}}


id: FYPO:0004361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which haploid cells undergo meiotic nuclear division and attempt to sporulate when the cells are subject to nitrogen starvation. Haploid meiosis often results in the formation of a structure that resembles an azygotic ascus. Spores produced from a haploid cell have poor viability and appear to contain only 1/2C DNA on average.","definition_xrefs":["DOI:10.1007/BF00332932","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle entry and sporulation in haploid","termid":"FYPO:0001886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"meiotic cell cycle entry and sporulation in haploid during nitrogen starvation","synonyms":[{"name":"haploid meiosis during nitrogen starvation","type":"related"},{"name":"haploid sporulation during nitrogen starvation","type":"related"},{"name":"meiosis in haploid during nitrogen starvation","type":"related"},{"name":"meiotic nuclear division and sporulation in haploid during nitrogen starvation","type":"narrow"},{"name":"sporulation in haploid during nitrogen starvation","type":"related"}],"termid":"FYPO:0004361"}


id: SO:0002161
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where the copies of a short tandem repeat (STR) feature are either contracted or expanded.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_variant","termid":"SO:0002160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short_tandem_repeat_change","synonyms":[{"name":"short tandem repeat change","type":"exact"},{"name":"str change","type":"exact"}],"termid":"SO:0002161"}


id: MONDO:0013933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX2 defect","termid":"MONDO:0100260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0005559","MONDO:0005244","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 5B","secondary_identifiers":["NCIT:C155757","UMLS:C3542026","GARD:15862","OMIM:614867","DOID:0081434","MEDGEN:762202"],"synonyms":[{"name":"PBD5B","type":"related"},{"name":"peroxisome biogenesis disorder 5B","type":"exact"},{"name":"peroxisome biogenesis disorder type 5B","type":"exact"}],"termid":"MONDO:0013933","xrefs":{"Monarch":{"xref_id":"0013933"}}}


id: MONDO:0001999
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85860,85861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","definition":"Increased blood pressure in the arteries of the lungs; the etiology is unknown.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic pulmonary heart disease","termid":"MONDO:0001493"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"primary pulmonary hypertension","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:416.0","DOID:14557","MEDGEN:57749","UMLS:C0152171","ICD10CM:I27.0"],"synonyms":[{"name":"primary pulmonary hypertension","type":"exact"},{"name":"pulmonary hypertension, primary","type":"exact"}],"termid":"MONDO:0001999","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0001999"}}}


id: GO:0035027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to leading edge cell fate and their capacity to differentiate into leading edge cells. Leading edge cells are found at the front of a migrating epithelial sheet.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"leading edge cell differentiation","termid":"GO:0035026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell fate commitment","termid":"GO:0035027"}


id: SO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the genome that has been predicted to be a gene but has not been confirmed by laboratory experiments.","direct_ancestors":[{"relation_name":"has_quality","term_name":"predicted","termid":"SO:0000732"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted_gene","synonyms":[{"name":"predicted gene","type":"exact"}],"termid":"SO:0000996"}


id: MONDO:0002319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic disorder that affects the phosphate homeostasis.","definition_xrefs":["NCIT:C97095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"phosphorus metabolism disease","secondary_identifiers":["MESH:D010760","ICD9:275.3","ICD10CM:E83.3","MEDGEN:19276","SCTID:87049008","UMLS:C0031707","DOID:2485"],"synonyms":[{"name":"disorder of phosphorus metabolism","type":"exact"},{"name":"phosphorus disorder","type":"exact"},{"name":"phosphorus metabolic disorder","type":"exact"},{"name":"phosphorus metabolism disorder","type":"exact"}],"termid":"MONDO:0002319","xrefs":{"Monarch":{"xref_id":"0002319"}}}


id: PBO:0090137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom22","termid":"PBO:0090137"}


id: GO:0090130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a tissue undergo directed movement.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue migration","termid":"GO:0090130"}


id: MONDO:0018899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Posterior Cortical Atrophy (PCA) is a rare progressive neurodegenerative disorder with a typical onset between 50-65 years of age characterized by progressive impairment of higher visual processing skills and other posterior cortical functions without any evidence of ocular abnormalities.","definition_xrefs":["Orphanet:54247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"posterior cortical atrophy","secondary_identifiers":["UMLS:C4275079","GARD:18846","icd11.foundation:377572273","MEDGEN:909667","SCTID:715574002"],"synonyms":[{"name":"Benson syndrome","type":"exact"},{"name":"PCA","type":"exact"},{"name":"biparietal Alzheimer disease","type":"exact"}],"termid":"MONDO:0018899","xrefs":{"Monarch":{"xref_id":"0018899"}}}


id: PBO:0045831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 21","termid":"PBO:0045831"}


id: PBO:0078256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 30","termid":"PBO:0078256"}


id: GO:1902313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:21489137","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of copper ion transmembrane transport","termid":"GO:1902311"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of copper ion transmembrane transport","synonyms":[{"name":"activation of copper cation transmembrane transport","type":"narrow"},{"name":"activation of copper ion membrane transport","type":"narrow"},{"name":"activation of copper ion transmembrane transport","type":"narrow"},{"name":"positive regulation of copper cation transmembrane transport","type":"exact"},{"name":"positive regulation of copper ion membrane transport","type":"exact"},{"name":"up regulation of copper cation transmembrane transport","type":"exact"},{"name":"up regulation of copper ion membrane transport","type":"exact"},{"name":"up regulation of copper ion transmembrane transport","type":"exact"},{"name":"up-regulation of copper cation transmembrane transport","type":"exact"},{"name":"up-regulation of copper ion membrane transport","type":"exact"},{"name":"up-regulation of copper ion transmembrane transport","type":"exact"},{"name":"upregulation of copper cation transmembrane transport","type":"exact"},{"name":"upregulation of copper ion membrane transport","type":"exact"},{"name":"upregulation of copper ion transmembrane transport","type":"exact"}],"termid":"GO:1902313"}


id: GO:1901947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["PMID:22027823","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolism","type":"exact"}],"termid":"GO:1901947"}


id: GO:1904305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastro-intestinal system smooth muscle contraction.","definition_xrefs":["GOC:TermGenie","PMID:10821044","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"negatively_regulates","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastro-intestinal system smooth muscle contraction","synonyms":[{"name":"down regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"down-regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"downregulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"inhibition of gastro-intestinal system smooth muscle contraction","type":"narrow"}],"termid":"GO:1904305"}


id: MOD:00982
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-selenocysteine (not known as a natural post-translational modification process).","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-selenocysteine residue","termid":"MOD:00031"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteine (Ser)","synonyms":[{"name":"Sec(Ser)","type":"exact"},{"name":"Selenocysteine (from Serine)","type":"exact"}],"termid":"MOD:00982"}


id: GO:0045691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of female gametophyte central cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryo sac central cell differentiation","synonyms":[{"name":"regulation of female gametophyte central cell differentiation","type":"exact"}],"termid":"GO:0045691"}


id: MONDO:0013368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mammary-digital-nail syndrome is a syndromic limb malformation characterized by congenital onychodystrophy/anonychia, brachydactyly of the fifth finger, digitalization of the thumbs, with absence or hypoplasia of the distal phalanges of the hands and feet in association with juvenile hypertrophy of the breast with gigantomastia in peripubertal females.","definition_xrefs":["Orphanet:238744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mammary-digital-nail syndrome","secondary_identifiers":["MEDGEN:462296","GARD:17180","UMLS:C3150946","OMIM:613689","SCTID:718679004"],"synonyms":[{"name":"MDN syndrome","type":"exact"},{"name":"MDNS","type":"related"},{"name":"mammary-digital-nail syndrome","type":"exact"},{"name":"onycho-digito-mammary syndrome","type":"exact"}],"termid":"MONDO:0013368","xrefs":{"Monarch":{"xref_id":"0013368"}}}


id: FYPO:0000521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisome localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal peroxisome localization","synonyms":[{"name":"abnormal peroxisomal distribution","type":"exact"},{"name":"abnormal peroxisome localisation","type":"exact"},{"name":"abnormal peroxisome localization during mitotic cell cycle","type":"related"},{"name":"abnormal peroxisome localization during vegetative growth","type":"exact"},{"name":"peroxisomal distribution: abnormal","type":"related"}],"termid":"FYPO:0000521"}


id: PBO:0073383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETBP1 divergent transcript","termid":"PBO:0073383"}


id: MONDO:0859050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited predisposition to Schistosoma mansoni infection intensity and reinfection after treatment.","definition_xrefs":["OMIM:181460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schistosoma mansoni infection, susceptibility/resistance to","secondary_identifiers":["MEDGEN:401132","UMLS:C1866993"],"termid":"MONDO:0859050","xrefs":{"Monarch":{"xref_id":"0859050"}}}


id: MONDO:0001484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of schizophrenia characterized by prominent delusions (typically persecutory or grandiose) or hallucinations in the context of a relative preservation of cognitive functioning and affect.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"paranoid schizophrenia","secondary_identifiers":["DOID:1229","ICD10CM:F20.0","ICD9:295.3","ICD9:295.31","MEDGEN:20664","MESH:D012563","UMLS:C0036349","NCIT:C35006","SCTID:31658008","ICD9:295.30","ICD9:295.32"],"synonyms":[{"name":"chronic paranoid schizophrenia","type":"exact"},{"name":"paranoid type schizophrenia","type":"exact"},{"name":"paranoid type schizophrenia subchronic state","type":"exact"},{"name":"paraphrenia - late","type":"exact"},{"name":"paraphrenic schizophrenia","type":"exact"}],"termid":"MONDO:0001484","xrefs":{"Monarch":{"xref_id":"0001484"}}}


id: GO:1990731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in the endonucleolytic cleavage of the damaged strand of DNA immediately 5' of a UV-induced damage site, and is the first part of a DNA repair process that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PMID:10704216"],"gene_count":0,"genotype_count":0,"name":"obsolete UV-damage excision repair, DNA incision (obsolete GO:1990731)","synonyms":[{"name":"DNA incision involved in AER","type":"related"},{"name":"DNA incision involved in UV-damage excision repair","type":"exact"},{"name":"DNA incision involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"DNA incision involved in UVDE-dependent excision repair","type":"exact"},{"name":"DNA incision involved in UVER","type":"exact"},{"name":"DNA incision involved in alternative excision repair","type":"related"},{"name":"UV-damaged DNA endonuclease-dependent excision repair, DNA incision","type":"exact"},{"name":"UVDE-dependent excision repair, DNA incision","type":"exact"},{"name":"alternative excision repair, DNA incision","type":"related"},{"name":"nucleic acid cleavage involved in UV-damage excision repair","type":"exact"}],"termid":"GO:1990731"}


id: MONDO:0022981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"die Smulders droog van dijk syndrome","termid":"MONDO:0022981","xrefs":{"Monarch":{"xref_id":"0022981"}}}


id: PBO:0063487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 4","termid":"PBO:0063487"}


id: PBO:0029163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation","termid":"PBO:0029163"}


id: PBO:0044729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 12B, pseudogene","termid":"PBO:0044729"}


id: GO:0004359
data:
  {"annotated_genes":["SJAG_00691","SJAG_00964","SJAG_00392","SJAG_02618","SJAG_03775"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92020,92620,109558,110224,116432],"is_not":false,"summary":null,"term":"GO:0004359"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3.","definition_xrefs":["EC:3.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00691":null,"SJAG_00964":null,"SJAG_02618":null,"SJAG_03775":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"glutaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:15889","Reactome:R-HSA-70609"],"synonyms":[{"name":"L-glutaminase activity","type":"related"},{"name":"L-glutamine amidohydrolase activity","type":"related"},{"name":"glutaminase I","type":"related"},{"name":"glutamine aminohydrolase activity","type":"related"}],"termid":"GO:0004359","terms_by_termid":{"GO:0004359":null}}


id: GO:0050100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylene-3-methylsuccinate = dimethylmaleate.","definition_xrefs":["RHEA:23480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"methylitaconate delta-isomerase activity","secondary_identifiers":["EC:5.3.3.6","KEGG_REACTION:R03070","MetaCyc:METHYLITACONATE-DELTA-ISOMERASE-RXN"],"synonyms":[{"name":"methylitaconate D-isomerase activity","type":"exact"},{"name":"methylitaconate delta2-delta3-isomerase activity","type":"related"},{"name":"methylitaconate isomerase activity","type":"related"}],"termid":"GO:0050100"}


id: PBO:0065834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB8B, member RAS oncogene family","termid":"PBO:0065834"}


id: RO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between two neurons that are electrically coupled via gap junctions.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_neural_circuit_with","termid":"RO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electrically_synapsed_to","termid":"RO:0002003"}


id: GO:1990895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell cortex of cell tip.","definition_xrefs":["GOC:vw","PMID:26150232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"regulates","term_name":"protein localization to cell cortex of cell tip","termid":"GO:1990896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell cortex of cell tip","termid":"GO:1990895"}


id: MONDO:0018833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare idiopathic macular telangiectasia (obsolete MONDO:0018833)","secondary_identifiers":["Orphanet:482092"],"termid":"MONDO:0018833","xrefs":{"Monarch":{"xref_id":"0018833"}}}


id: PBO:0111751
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein","termid":"PBO:0111751"}


id: PBO:0031524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA-7-methylguanine_glycosylase_activity","termid":"PBO:0031524"}


id: PBO:0089238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP6 subunit Alp16","termid":"PBO:0089238"}


id: GO:0051221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of tungsten into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tungsten incorporation into metallo-sulfur cluster (obsolete GO:0051221)","synonyms":[{"name":"tungsten incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0051221"}


id: GO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex that is located at the replication origins of a chromosome in the cytoplasm.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin recognition complex","termid":"GO:0000808"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic origin of replication recognition complex","synonyms":[{"name":"cytoplasmic ORC","type":"exact"},{"name":"prokaryotic ORC","type":"related"}],"termid":"GO:0000809"}


id: PBO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidylyltransferase (predicted)","termid":"PBO:0002236"}


id: PBO:0114857
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"there is a gene with the systematic identifier SPBC3B8.10 (ina17)","termid":"PBO:0114857"}


id: PBO:0066292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member T, pseudogene","termid":"PBO:0066292"}


id: GO:0042457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["GOC:jl","ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene metabolic process","termid":"GO:0009692"},{"relation_name":"is_a","term_name":"alkene catabolic process","termid":"GO:0043451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene catabolic process","synonyms":[{"name":"ethene catabolic process","type":"exact"},{"name":"ethene catabolism","type":"exact"},{"name":"ethylene breakdown","type":"exact"},{"name":"ethylene catabolism","type":"exact"},{"name":"ethylene degradation","type":"exact"}],"termid":"GO:0042457"}


id: MONDO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ullrich congenital muscular dystrophy (UCMD) is characterized by early-onset, generalized and slowly progressive muscle weakness, multiple proximal joint contractures, marked hypermobility of the distal joints and normal intelligence.","definition_xrefs":["Orphanet:75840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"Ullrich congenital muscular dystrophy","secondary_identifiers":["GARD:4769","DOID:0050558","SCTID:240062007","NANDO:2200862","MEDGEN:1642667","UMLS:C4551860","NCIT:C123438","NANDO:1200215","icd11.foundation:1011547453","OMIMPS:254090","MESH:C537521"],"synonyms":[{"name":"UCMD","type":"exact"},{"name":"Ullrich disease","type":"related"},{"name":"Ullrich scleroatonic muscular dystrophy","type":"exact"},{"name":"congenital muscular dystrophy, Ullrich type","type":"related"},{"name":"late onset scleroatonic familial myopathy (subtype)","type":"related"},{"name":"scleroatonic Ullrich disease","type":"exact"},{"name":"scleroatonic muscular dystrophy","type":"exact"}],"termid":"MONDO:0000355","xrefs":{"Monarch":{"xref_id":"0000355"}}}


id: GO:0061053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a somite from its initial formation to the mature structure. Somites are mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somite development","termid":"GO:0061053"}


id: PBO:0073628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 12","termid":"PBO:0073628"}


id: GO:0004428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol or phosphatidylinositol kinase activity (obsolete GO:0004428)","synonyms":[{"name":"inositol or phosphatidylinositol kinase activity","type":"exact"},{"name":"inositol/phosphatidylinositol kinase activity","type":"exact"}],"termid":"GO:0004428"}


id: PBO:0012570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome complex subunit Ecm29","termid":"PBO:0012570"}


id: PBO:0083301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of essential HAS1/YMR290C gene which encodes an ATP-dependent RNA helicase","termid":"PBO:0083301"}


id: GO:2001151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renal water transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal water transport","termid":"GO:0003097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of renal water transport","termid":"GO:2001151"}


id: GO:0055021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle growth.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart growth","termid":"GO:0060420"},{"relation_name":"regulates","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle tissue growth","termid":"GO:0055021"}


id: MONDO:0022676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract - glaucoma (obsolete MONDO:0022676)","termid":"MONDO:0022676","xrefs":{"Monarch":{"xref_id":"0022676"}}}


id: MONDO:0020397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parachute tricuspid valve is a rare congenital heart malformation defined as an insertion of the chordal apparatus into a single papillary muscle or a muscle group, making a pathognomonic 'pear' shape sign in the four-chamber echocardiographic view with the atrium forming the larger base of the pear and the leaflets the apex. Isolated parachute tricuspid valve may be asymptomatic or present with symptoms of tricuspid stenosis (diastolic inspiratory murmur, pulsation of jugular veins, hepatomegaly, edema, epigastric discomfort, right atrial enlargement, right ventricular hypertrophy, electrocardiography abnormalities). It may also be associated with other heart malformations and present with symptoms of the complex of malformations.","definition_xrefs":["Orphanet:99056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"parachute tricuspid valve","secondary_identifiers":["GARD:19624","MEDGEN:576478","UMLS:C0344755"],"termid":"MONDO:0020397","xrefs":{"Monarch":{"xref_id":"0020397"}}}


id: GO:0034240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or decreases the frequency, rate or extent of macrophage fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage fusion","termid":"GO:0034239"},{"relation_name":"is_a","term_name":"negative regulation of syncytium formation by plasma membrane fusion","termid":"GO:0034242"},{"relation_name":"negatively_regulates","term_name":"macrophage fusion","termid":"GO:0034238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage fusion","termid":"GO:0034240"}


id: PBO:0060603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit H","termid":"PBO:0060603"}


id: MONDO:0016582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mitral malformation","secondary_identifiers":["GARD:1495","Orphanet:2447","MEDGEN:1842184","UMLS:C5680882"],"termid":"MONDO:0016582","xrefs":{"Monarch":{"xref_id":"0016582"}}}


id: PBO:0089355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-diphospho-sugar transferase, unknown specificity","termid":"PBO:0089355"}


id: PBO:0051319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR10-1 (pseudogene)","termid":"PBO:0051319"}


id: PBO:0111928
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide matMc","termid":"PBO:0111928"}


id: MONDO:0007982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Jansen's metaphyseal chondrodysplasia (JMC) is a very rare autosomal dominant skeletal dysplasia characterized by short-limbed short stature (due to severe metaphyseal changes that are often discovered in childhood by imaging), waddling gait, bowed legs, contracture deformities of the joints, short hands with clubbed fingers, clinodactyly, prominent upper face and small mandible, as well as chronic parathyroid hormone-independent hypercalcemia, hypercalciuria, and mild hypophosphatemia.","definition_xrefs":["Orphanet:33067"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Pyle disease","termid":"MONDO:0009943"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metaphyseal chondrodysplasia, Jansen type","secondary_identifiers":["GARD:79","OMIM:156400","DOID:0080020","SCTID:24629003","icd11.foundation:1652660420","MESH:C537564","NCIT:C131868","MEDGEN:120529","NORD:1307","UMLS:C0265295"],"synonyms":[{"name":"Jansen Type Metaphyseal Chondrodysplasia","type":"exact"},{"name":"Jansen disease","type":"exact"},{"name":"Jansen metaphyseal chondrodysplasia","type":"exact"},{"name":"Jansen metaphyseal dysostosis","type":"exact"},{"name":"Jansen type metaphyseal chondrodysplasia","type":"exact"},{"name":"Jansen's metaphyseal chondrodysplasia","type":"exact"},{"name":"metaphyseal chondrodysplasia murk Jansen type","type":"exact"},{"name":"metaphyseal chondrodysplasia, Jansen type","type":"exact"},{"name":"metaphyseal chondrodysplasia, murk Jansen type","type":"exact"},{"name":"murk Jansen type metaphyseal chondrodysplasia","type":"exact"}],"termid":"MONDO:0007982","xrefs":{"Monarch":{"xref_id":"0007982"}}}


id: PBO:0082216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 5 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit zeta","termid":"PBO:0082216"}


id: GO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of vasoactive intestinal polypeptide receptor activity in another organism","termid":"GO:0044519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044520"}


id: PBO:0032730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Smp3 (predicted)","termid":"PBO:0032730"}


id: GO:0000779
data:
  {"annotated_genes":["SJAG_02624","SJAG_04841","SJAG_02336","SJAG_04177","SJAG_04696","SJAG_01831","SJAG_04255","SJAG_04126","SJAG_04623","SJAG_04699","SJAG_01224","SJAG_04076","SJAG_00918","SJAG_03683","SJAG_03681","SJAG_01330","SJAG_01297","SJAG_00082","SJAG_05266","SJAG_03048","SJAG_03437","SJAG_00697","SJAG_01601","SJAG_01928","SJAG_01082","SJAG_01837","SJAG_01836","SJAG_02346","SJAG_05321","SJAG_03832","SJAG_00646","SJAG_00307","SJAG_03220","SJAG_00666","SJAG_02814","SJAG_01211","SJAG_03540","SJAG_01278","SJAG_05019","SJAG_03989","SJAG_03161","SJAG_03926","SJAG_03867","SJAG_01775","SJAG_01613","SJAG_01067","SJAG_04884","SJAG_00418","SJAG_04412","SJAG_04581","SJAG_02731","SJAG_02451","SJAG_02761","SJAG_03916","SJAG_05273","SJAG_04038","SJAG_01228","SJAG_03619","SJAG_00794","SJAG_01546","SJAG_01805","SJAG_02513","SJAG_03217","SJAG_03327","SJAG_01371","SJAG_04259","SJAG_00350","SJAG_02664","SJAG_05319","SJAG_04040","SJAG_00207","SJAG_04745","SJAG_00684","SJAG_02807","SJAG_03418","SJAG_05220"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87017,88890,88945,89269,90122,90180,90468,93497,93890,94497,94751,97810,98308,98456,99697,101246,101614,104632,104703,106653,106892,106936,106972,108288,109454,109499,111317,112245,112352,112906,113263,115053,115990],"is_not":false,"summary":null,"term":"GO:0000779"},{"annotations":[113227,97812,116047,88947,106655,88347,99699,109042,90182,108032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042729"},{"annotations":[112353,89241,98458,88891,113264,113624,115029,104705,115793,109455,111318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000939"},{"annotations":[113695,99700,93892,109054,114212,117258,98459,105472,108360,117810,89242,107396,89984,92980,104633,100977,111185,112680,101615,97095,87210,88892,93958,99317,89188,108290,115794,118241,117774,100513,94498,90183,97813,96470,94752,111030,118347,109500,112512,113265,112907,93395,98402,88563,115054,101529,117973,99555,106656,95956,103060,105520,112246,114686,111319,112354,113625,109456],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000776"},{"annotations":[112908,100514],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180019"},{"annotations":[94753,98460,109501,109457],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000444"},{"annotations":[113696,93893,104706,89243,88893,112247,93499,105521,112681,97096,113266],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031511"},{"annotations":[110823,87212],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033551"},{"annotations":[101616,94500,108291,115055],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031262"},{"annotations":[97818,88951,94754,112909,101618,113629,115057,117781,109459,99562],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000940"}]},"cv_name":"cellular_component","definition":"The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.","definition_xrefs":["GOC:elh","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome, centromeric region","termid":"GO:0000775"},{"relation_name":"part_of","term_name":"condensed chromosome","termid":"GO:0000793"}],"gene_count":76,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00307":null,"SJAG_00350":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00684":null,"SJAG_00697":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01067":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01831":null,"SJAG_01836":null,"SJAG_01837":null,"SJAG_01928":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02513":null,"SJAG_02624":null,"SJAG_02664":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03418":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03619":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03832":null,"SJAG_03867":null,"SJAG_03916":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04038":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04581":null,"SJAG_04623":null,"SJAG_04696":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05273":null,"SJAG_05319":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"condensed chromosome, centromeric region","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:32109380":null},"secondary_identifiers":["GO:0000780"],"synonyms":[{"name":"condensed chromosome, centric region","type":"exact"},{"name":"condensed chromosome, centromere","type":"related"},{"name":"condensed chromosome, pericentric region","type":"related"},{"name":"condensed nuclear chromosome, centromeric region","type":"narrow"}],"termid":"GO:0000779","terms_by_termid":{"GO:0000444":null,"GO:0000776":null,"GO:0000779":null,"GO:0000939":null,"GO:0000940":null,"GO:0031262":null,"GO:0031511":null,"GO:0033551":null,"GO:0042729":null,"GO:0180019":null}}


id: GO:0018185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine by the addition of an N6-propylamino and of propylmethylamino units, forming N6-(propylamino-poly(propylmethylamino)-propyldimethylamine)-L-lysine, typical of the silicate binding protein silaffin.","definition_xrefs":["RESID:AA0278"],"gene_count":0,"genotype_count":0,"name":"obsolete poly-N-methyl-propylamination (obsolete GO:0018185)","termid":"GO:0018185"}


id: PBO:0042366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD164 molecule","termid":"PBO:0042366"}


id: PBO:0066001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GTPase activating protein catalytic subunit alpha 1","termid":"PBO:0066001"}


id: GO:0090559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by a membrane.","definition_xrefs":["GOC:kmv","PMID:22677064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane permeability","termid":"GO:0090559"}


id: FYPO:0003599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0034472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal snRNA 3'-end processing","synonyms":[{"name":"normal snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"normal snRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003599"}


id: PR:P87232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.06c","synonyms":[{"name":"Spom972h-mrpl4","type":"exact"}],"termid":"PR:P87232"}


id: SO:0001485
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A Y' element is a repeat region (SO:0000657) located adjacent to telomeric repeats or X element combinatorial repeats, either as a single copy or tandem repeat of two to four copies.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_prime_element","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:Y_prime_element","type":"exact"},{"name":"Y prime element","type":"exact"},{"name":"Y' element","type":"exact"}],"termid":"SO:0001485"}


id: MONDO:0020696
data:
  {"annotated_genes":["SJAG_04459","SJAG_04425","SJAG_04042","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84473,84474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[85085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[85905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"A disease characterized by low serum levels of vitamin B12, either inherited or acquired.","definition_xrefs":["PMID:16846473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"vitamin B deficiency","termid":"MONDO:0042976"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01199":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin B12 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1366882206","ICD9:266.2","SCTID:190634004","HP:0100502","MEDGEN:21880","UMLS:C0042847","EFO:0000734","MESH:D014806","NCIT:C131684"],"synonyms":[{"name":"cobalamin deficiency","type":"exact"},{"name":"hypocobalaminemia","type":"exact"},{"name":"vitamin b12 deficiency","type":"exact"}],"termid":"MONDO:0020696","terms_by_termid":{"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0020696"}}}


id: PBO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2494","termid":"PBO:0055077"}


id: GO:0035296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the diameter of a tube.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size","termid":"GO:0035150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube diameter","termid":"GO:0035296"}


id: MONDO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic neutrophilic leukemia (obsolete MONDO:0000896)","termid":"MONDO:0000896","xrefs":{"Monarch":{"xref_id":"0000896"}}}


id: SO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transcription pause sites are regions of a gene where RNA polymerase may pause during transcription. The functional role of pausing may be to facilitate factor recruitment, RNA folding, and synchronization with translation. Consensus transcription pause site have been observed in E. coli.","definition_xrefs":["PMID:24789973","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_pause_site","synonyms":[{"name":"transcription pause site","type":"exact"}],"termid":"SO:0002047"}


id: GO:0032116
data:
  {"annotated_genes":["SJAG_00682","SJAG_04508","SJAG_02606","SJAG_00796"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88879,95434],"is_not":false,"summary":null,"term":"GO:0032116"},{"annotations":[95433,88878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090694"},{"annotations":[87079,109692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090695"}]},"cv_name":"cellular_component","definition":"A protein complex required for the loading of a structural maintenance of chromosome (SMC) complex, such as cohesin, condensin or SMC5/SMC6, onto DNA. Appears to be eukaryotically conserved.","definition_xrefs":["GOC:vw","GOC:curators","PMID:10882066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00682":null,"SJAG_00796":null,"SJAG_02606":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"SMC loading complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SCC2/SCC4 loading complex","type":"narrow"},{"name":"chromatin loading complex","type":"related"},{"name":"cohesin loading complex","type":"narrow"}],"termid":"GO:0032116","terms_by_termid":{"GO:0032116":null,"GO:0090694":null,"GO:0090695":null}}


id: PBO:0113056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glucose deprivation induced stress granules; involved in P-body-dependent granule assembly; regulates TORC1 signaling and autophagy; interacts with Pab1p to regulate mRNA polyadenylation; interacts with Mkt1p to regulate HO translation; regulates expression of genes involved in gluconeogenesis and mitochondrial function through multiple mechanisms","termid":"PBO:0113056"}


id: PBO:0017425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_part_of","termid":"PBO:0017425"}


id: PBO:0111856
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 subfamily","termid":"PBO:0111856"}


id: PBO:0038372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-facultative_parasite_of","termid":"PBO:0038372"}


id: GO:0008851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanolamine = acetaldehyde + NH3.","definition_xrefs":["EC:4.3.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ethanolamine ammonia-lyase activity","secondary_identifiers":["RHEA:15313","MetaCyc:ETHAMLY-RXN"],"synonyms":[{"name":"ethanolamine ammonia-lyase (acetaldehyde-forming) activity","type":"related"},{"name":"ethanolamine deaminase activity","type":"related"}],"termid":"GO:0008851"}


id: PBO:0092038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor, glutathione S-transferase","termid":"PBO:0092038"}


id: MONDO:0010541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked calvarial hyperostosis","secondary_identifiers":["MEDGEN:1674665","UMLS:C5190611","OMIM:302030","Orphanet:391327","GARD:1058","MESH:C537963"],"synonyms":[{"name":"calvarial hyperostosis","type":"related"},{"name":"isolated hyperostosis of the calvarium","type":"related"}],"termid":"MONDO:0010541","xrefs":{"Monarch":{"xref_id":"0010541"}}}


id: PBO:0060390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 1","termid":"PBO:0060390"}


id: PBO:0113341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in regulating assembly of Gid4p into the GID E3 ligase complex; interacts with GID complex components; involved in actin patch formation; computationally predicted to be involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; non-essential gene","termid":"PBO:0113341"}


id: PBO:0059057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1A","termid":"PBO:0059057"}


id: PBO:0061508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRXN2 antisense RNA 1","termid":"PBO:0061508"}


id: GO:0141075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:20624917","PMID:22919663","PMID:27437422","PMID:29924996","PMID:31413201"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of host JAK-STAT cascade (obsolete GO:0141075)","synonyms":[{"name":"disruption of host JAK-STAT cascade","type":"exact"},{"name":"down-regulation of host JAK-STAT cascade","type":"exact"},{"name":"downregulation of host JAK-STAT cascade","type":"exact"},{"name":"inhibition of host JAK-STAT cascade","type":"narrow"},{"name":"negative regulation of host JAK-STAT cascade","type":"exact"},{"name":"suppression of host JAK-STAT cascade","type":"exact"},{"name":"symbiont-mediated suppression of host JAK-STAT cascade","type":"related"}],"termid":"GO:0141075"}


id: MONDO:0006683
data:
  {"annotated_genes":["SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008076"}]},"cv_name":"mondo","definition":"A brachial plexus disorder characterized by regional paresthesia, pain and muscle weakness, and limited movement in the arm or hand.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve plexus disorder","termid":"MONDO:0024432"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"brachial plexus neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C27194","MEDGEN:148580","EFO:1000844","MESH:D020516","UMLS:C0700251","ICD9:353.0","SCTID:3548001","DOID:3690"],"synonyms":[{"name":"brachial nerve plexus peripheral neuropathy","type":"exact"},{"name":"brachial plexopathy","type":"exact"},{"name":"brachial plexus disorder","type":"exact"},{"name":"peripheral neuropathy of brachial nerve plexus","type":"exact"}],"termid":"MONDO:0006683","terms_by_termid":{"MONDO:0008076":null},"xrefs":{"Monarch":{"xref_id":"0006683"}}}


id: PBO:0048310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 21","termid":"PBO:0048310"}


id: PBO:0051440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-25","termid":"PBO:0051440"}


id: GO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic metabolic process","synonyms":[{"name":"antibiotic metabolism","type":"exact"}],"termid":"GO:0016999"}


id: MONDO:0012485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the S1PR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 68","secondary_identifiers":["OMIM:610419","MEDGEN:324374","UMLS:C1835854","MESH:C563669","GARD:22625","DOID:0110519"],"synonyms":[{"name":"DFNB68","type":"narrow"},{"name":"S1PR2 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 68","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 68","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in S1PR2","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 68","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 68","type":"exact"},{"name":"deafness, autosomal recessive 68","type":"narrow"}],"termid":"MONDO:0012485","xrefs":{"Monarch":{"xref_id":"0012485"}}}


id: FYPO:0005087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at transfer RNA (tRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:21151114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at ncRNA gene","termid":"FYPO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin at tRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at tRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at tDNA","type":"exact"},{"name":"normal protein localization to chromatin at tRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at tRNA gene during vegetative growth","type":"exact"}],"termid":"FYPO:0005087"}


id: PBO:0061029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninein","termid":"PBO:0061029"}


id: PBO:0072653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 6","termid":"PBO:0072653"}


id: PR:Q10138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csr102 gene.","definition_xrefs":["UniProtKB:Q10138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C3H8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.02","synonyms":[{"name":"Spom972h-csr102","type":"exact"}],"termid":"PR:Q10138"}


id: GO:0014726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle tissue development","termid":"GO:0048642"},{"relation_name":"negatively_regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extraocular skeletal muscle development","termid":"GO:0014726"}


id: PBO:0082842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed DL-glycerol-3-phosphate phosphatase; also known as glycerol-1-phosphatase; involved in glycerol biosynthesis, induced in response to both anaerobic and osmotic stress; GPP1 has a paralog, GPP2, that arose from the whole genome duplication","termid":"PBO:0082842"}


id: PBO:0080349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 1 pseudogene","termid":"PBO:0080349"}


id: PBO:0005210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase Lig4","termid":"PBO:0005210"}


id: FYPO:0005525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in centromere inner repeat regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:22990236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy at centromeric heterochromatin","termid":"FYPO:0008151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased nucleosome occupancy at centromere inner repeat","synonyms":[{"name":"decreased nucleosome occupancy at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in centromere inner repeat","type":"exact"},{"name":"reduced nucleosome occupancy at centromere inner repeat","type":"exact"}],"termid":"FYPO:0005525"}


id: GO:0019237
data:
  {"annotated_genes":["SJAG_03217","SJAG_01745","SJAG_00307","SJAG_03183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90554,101249,104640,115606],"is_not":false,"summary":null,"term":"GO:0019237"}]},"cv_name":"molecular_function","definition":"Binding to a centromere, a region of chromosome where the spindle fibers attach during mitosis and meiosis.","definition_xrefs":["SO:0000577","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00307":null,"SJAG_01745":null,"SJAG_03183":null,"SJAG_03217":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"centromeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere binding","type":"exact"}],"termid":"GO:0019237","terms_by_termid":{"GO:0019237":null}}


id: PBO:0044538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differentiation antagonizing non-protein coding RNA","termid":"PBO:0044538"}


id: PBO:0002738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease","termid":"PBO:0002738"}


id: PBO:0055279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2706","termid":"PBO:0055279"}


id: MOD:01767
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-131 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-131 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01767"}


id: FYPO:0002870
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118499],"is_not":false,"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a non-growing cell tip is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to new cell tip","termid":"FYPO:0004977"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null,"SJAG_04522":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to non-growing cell tip","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein localisation to non-growing cell tip","type":"exact"},{"name":"increased protein localization to new non-growing cell tip","type":"exact"},{"name":"increased protein localization to non-growing cell end","type":"exact"},{"name":"increased protein localization to non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to non-growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0002870","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null}}


id: GO:0047262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-galacturonate + 1,4-alpha-D-galacturonosyl(n) = 1,4-alpha-D-galacturonosyl(n+1) + UDP.","definition_xrefs":["EC:2.4.1.43","MetaCyc:2.4.1.43-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"polygalacturonate 4-alpha-galacturonosyltransferase activity","secondary_identifiers":["RHEA:13573","GO:0050375"],"synonyms":[{"name":"UDP galacturonate-polygalacturonate alpha-galacturonosyltransferase activity","type":"related"},{"name":"UDP-D-galacturonate:1,4-alpha-poly-D-galacturonate 4-alpha-D-galacturonosyltransferase activity","type":"related"},{"name":"uridine diphosphogalacturonate-polygalacturonate alpha-galacturonosyltransferase activity","type":"related"}],"termid":"GO:0047262"}


id: MONDO:0010165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulna hypoplasia - intellectual deficit is a very rare syndrome characterized by mesomelic shortness of the forearms, bilateral clubfeet, aplasia or hypoplasia of all nails and severe psychomotor retardation.","definition_xrefs":["Orphanet:2249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"ulna hypoplasia-intellectual disability syndrome","secondary_identifiers":["UMLS:C1848650","MEDGEN:341275","MESH:C564757","GARD:5398","OMIM:276821"],"synonyms":[{"name":"bilateral ulnar hypoplasia and intellectual disability","type":"related"},{"name":"bilateral ulnar hypoplasia and mental retardation","type":"related"},{"name":"mesomelia of the upper limbs, absent nails, clubfeet, and intellectual disability","type":"related"},{"name":"mesomelia of the upper limbs, absent nails, clubfeet, and mental retardation","type":"related"},{"name":"mesomelia of the upper limbs, anonychia congenita, clubfeet, and intellectual disability","type":"related"},{"name":"mesomelia of the upper limbs, anonychia congenita, clubfeet, and mental retardation","type":"related"},{"name":"ulna hypoplasia with intellectual disability","type":"related"},{"name":"ulna hypoplasia with mental retardation","type":"related"},{"name":"ulnar hypoplasia with intellectual disability","type":"related"},{"name":"ulnar hypoplasia with mental retardation","type":"related"}],"termid":"MONDO:0010165","xrefs":{"Monarch":{"xref_id":"0010165"}}}


id: PBO:0081709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF628 divergent transcript","termid":"PBO:0081709"}


id: MONDO:1010482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"},{"relation_name":"is_a","term_name":"conotruncal heart malformations, dog","termid":"MONDO:1010453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, dog","secondary_identifiers":["OMIA:000994-9615"],"termid":"MONDO:1010482","xrefs":{"Monarch":{"xref_id":"1010482"}}}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: PBO:0031486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_meiotic_spindle","termid":"PBO:0031486"}


id: FYPO:0000083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to enfumafungin. Cells stop growing (and may die) at a concentration of enfumafungin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to enfumafungin","synonyms":[{"name":"hypersensitive to enfumafungin","type":"exact"},{"name":"sensitive to enfumafungin during mitotic cell cycle","type":"related"},{"name":"sensitive to enfumafungin during vegetative growth","type":"exact"},{"name":"sensitive to glucan synthase inhibitor","type":"broad"}],"termid":"FYPO:0000083"}


id: PBO:0063351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNX4 divergent transcript","termid":"PBO:0063351"}


id: PBO:0030822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_trifluoperazine","termid":"PBO:0030822"}


id: MONDO:0015623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cavitary myiasis is a rare parasitic disease characterized by the infestation of natural body cavities (e.g. aural, nasal, oral, urogenital myiasis) and internal organs (e.g. cerebral myiasis, ophthalmomyiasis, intestinal and tracheopulmonary myiasis) with dipteran larvae. Clinical presentation is variable depending on the affected site(s) and degree of infestation and include foreign-body sensation (with or without movement sensation), hemorrhage, pain, edema, sensory loss, malodor, and pruritus, among others. Neurological features (e.g. motor deficits, seizures, reduced mental status, extrapyramidal signs) have been reported in cerebral myiasis.","definition_xrefs":["Orphanet:165958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myiasis","termid":"MONDO:0019147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cavitary myiasis","secondary_identifiers":["GARD:20066","MEDGEN:1631496","UMLS:C4707154","SCTID:764811001"],"termid":"MONDO:0015623","xrefs":{"Monarch":{"xref_id":"0015623"}}}


id: GO:0000824
data:
  {"annotated_genes":["SJAG_03409","SJAG_02321"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97996,117947],"is_not":false,"summary":null,"term":"GO:0000824"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["RHEA:11856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02321":null,"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol-1,4,5,6-tetrakisphosphate 3-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855185","MetaCyc:RXN-7162","KEGG_REACTION:R05801"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 3-kinase activity","type":"broad"},{"name":"IpmK","type":"broad"},{"name":"inositol 1,4,5,6-tetrakisphosphate 3-kinase activity","type":"exact"},{"name":"inositol polyphosphate multikinase activity","type":"broad"},{"name":"inositol tetrakisphosphate 3-kinase activity","type":"broad"}],"termid":"GO:0000824","terms_by_termid":{"GO:0000824":null}}


id: PBO:0046917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 32 member A","termid":"PBO:0046917"}


id: PBO:0074810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 14B","termid":"PBO:0074810"}


id: PBO:0068405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 224","termid":"PBO:0068405"}


id: PATO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoelliptic","termid":"PATO:0002321"}


id: PBO:0028850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_phenotype","termid":"PBO:0028850"}


id: MONDO:0006756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete extracutaneous mastocytoma (obsolete MONDO:0006756)","termid":"MONDO:0006756","xrefs":{"Monarch":{"xref_id":"0006756"}}}


id: GO:0140245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates translation occurring at the postsynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation at synapse","termid":"GO:0140243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation at postsynapse","termid":"GO:0140245"}


id: PBO:0053885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1165","termid":"PBO:0053885"}


id: PBO:0081124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFHX2 antisense RNA 1","termid":"PBO:0081124"}


id: PBO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type (predicted)","termid":"PBO:0000604"}


id: GO:0017161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-myo-inositol 1,3,4-trisphosphate + H2O = myo-inositol 1,3-bisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 4-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855180","RHEA:43392"],"termid":"GO:0017161"}


id: GO:0060222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the process in which a cell becomes committed to a retinal cone cell fate. Retinal cone cell fate commitment is the process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"regulates","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"}


id: PBO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Adg2","termid":"PBO:0002355"}


id: PBO:0030478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutamine_level","termid":"PBO:0030478"}


id: MONDO:0032706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 27","secondary_identifiers":["OMIM:618369","MEDGEN:1672866","UMLS:C5193058","DOID:0111616"],"synonyms":[{"name":"SCAR27","type":"related"},{"name":"SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 27","type":"related"}],"termid":"MONDO:0032706","xrefs":{"Monarch":{"xref_id":"0032706"}}}


id: MONDO:1010791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tricho-dento-osseous-like syndrome that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricho-dento-osseous-like syndrome, non-human animal","termid":"MONDO:1010149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricho-dento-osseous-like syndrome, cattle","secondary_identifiers":["OMIA:002109-9913"],"termid":"MONDO:1010791","xrefs":{"Monarch":{"xref_id":"1010791"}}}


id: MONDO:0021472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the scrotum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign male reproductive system neoplasm","termid":"MONDO:0000625"},{"relation_name":"is_a","term_name":"scrotum neoplasm","termid":"MONDO:0003319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of scrotum","secondary_identifiers":["NCIT:C3615","SCTID:92336000","UMLS:C0154011","icd11.foundation:640770928","ICD9:222.4","ICD10CM:D29.4","MEDGEN:102302"],"synonyms":[{"name":"benign neoplasm of the scrotum","type":"exact"},{"name":"benign scrotal neoplasm","type":"exact"},{"name":"benign scrotal tumor","type":"exact"},{"name":"benign scrotal tumour","type":"exact"},{"name":"benign tumor of scrotum","type":"exact"},{"name":"benign tumor of the scrotum","type":"exact"},{"name":"benign tumour of scrotum","type":"exact"},{"name":"benign tumour of the scrotum","type":"exact"},{"name":"scrotum benign neoplasm","type":"exact"}],"termid":"MONDO:0021472","xrefs":{"Monarch":{"xref_id":"0021472"}}}


id: PR:Q10165
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnt6 gene.","definition_xrefs":["UniProtKB:Q10165","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosylation factor GTPase-activating protein cnt6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.10","synonyms":[{"name":"Spom972h-cnt6","type":"exact"}],"termid":"PR:Q10165"}


id: PBO:0029802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cables","termid":"PBO:0029802"}


id: PR:P22193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02073","PANTHER:PTHR10870:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint control protein rad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.07","secondary_identifiers":["UniProtKB:P22193"],"synonyms":[{"name":"Spom972h-RAD1","type":"exact"}],"termid":"PR:P22193"}


id: PBO:0029530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_beta-glucanase","termid":"PBO:0029530"}


id: PBO:0091084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSB-forming protein Rec12/Spo11","termid":"PBO:0091084"}


id: PBO:0052626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 5","termid":"PBO:0052626"}


id: PBO:0057527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 644a","termid":"PBO:0057527"}


id: MOD:01044
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00080. Remap to MOD:00080.","definition_xrefs":["DeltaMass:166"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01044 N-methyl glutamyl (obsolete MOD:01044)","termid":"MOD:01044"}


id: PBO:0085750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; implicated in Slt2p mitogen-activated (MAP) kinase signaling pathway; interacts with numerous components in the mating pheromone and CWI MAPK pathways; associates with Rlm1p; KDX1 has a paralog, SLT2, that arose from the whole genome duplication","termid":"PBO:0085750"}


id: GO:0018149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between or within protein chains.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking","termid":"GO:0018149"}


id: PBO:0043832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 4","termid":"PBO:0043832"}


id: MONDO:0014727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 45","secondary_identifiers":["MEDGEN:901044","UMLS:C4225252","DOID:0111994","OMIM:616669"],"synonyms":[{"name":"IMD45","type":"exact"},{"name":"immunodeficiency 45","type":"exact"},{"name":"immunodeficiency type 45","type":"exact"}],"termid":"MONDO:0014727","xrefs":{"Monarch":{"xref_id":"0014727"}}}


id: PBO:0055297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2724","termid":"PBO:0055297"}


id: PBO:0068162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 469","termid":"PBO:0068162"}


id: GO:0046352
data:
  {"annotated_genes":["SJAG_04301","SJAG_02131","SJAG_04859","SJAG_03824","SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100783,100782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[99535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[115257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[110654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of disaccharides, sugars composed of two monosaccharide units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"},{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_02949":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"disaccharide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"disaccharide breakdown","type":"exact"},{"name":"disaccharide catabolism","type":"exact"},{"name":"disaccharide degradation","type":"exact"}],"termid":"GO:0046352","terms_by_termid":{"GO:0000025":null,"GO:0005987":null,"GO:0005993":null,"GO:0005995":null}}


id: MONDO:0013561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"chondrodysplasia with joint dislocations, gPAPP type","secondary_identifiers":["DOID:0112224","MEDGEN:481387","UMLS:C3279757","GARD:11009","Orphanet:280586","OMIM:614078"],"synonyms":[{"name":"chondrodysplasia with joint dislocations, gPAPP type","type":"exact"},{"name":"gPAPP deficiency","type":"exact"}],"termid":"MONDO:0013561","xrefs":{"Monarch":{"xref_id":"0013561"}}}


id: GO:1901900
data:
  {"annotated_genes":["SJAG_02645","SJAG_03602","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[97630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[107112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell division site.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:22573892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell division site","termid":"GO:0072741"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02645":null,"SJAG_03602":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell division site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell division site","type":"exact"}],"termid":"GO:1901900","terms_by_termid":{"GO:0120047":null,"GO:0140325":null,"GO:1905391":null}}


id: PBO:0084316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain family histone demethylase specific for H3-K36; similar to proteins found in human, mouse, drosophila, X. laevis, C. elegans, and S. pombe","termid":"PBO:0084316"}


id: PBO:0014304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial guanine nucleotide transporter Gcs1 (predicted)","termid":"PBO:0014304"}


id: GO:0140529
data:
  {"annotated_genes":["SJAG_04879","SJAG_01823","SJAG_02908","SJAG_02667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106505,109095,112696,114539],"is_not":false,"summary":null,"term":"GO:0140529"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the CMG complex, a protein complex that contains the GINS complex, Cdc45p, and the heterohexameric MCM complex, and that is involved in unwinding DNA during replication. The process begins when additional proteins (e.g. Cdc45 and Sld3) join the loaded, inactive double MCM hexamer at replication origins, and ends when Mcm10 triggers the separation of the Mcm2-7 double hexamers, forming two active CMG complexes.","definition_xrefs":["PMID:22718908","PMID:28501329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"},{"relation_name":"part_of","term_name":"nuclear cell cycle DNA replication initiation","termid":"GO:1902315"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01823":null,"SJAG_02667":null,"SJAG_02908":null,"SJAG_04879":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0006259","GO:0006260","GO:0007049","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"CMG complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140529","terms_by_termid":{"GO:0140529":null}}


id: FYPO:0003018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated during a cellular response to non-ionic osmotic stress.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell during cellular response to non-ionic osmotic stress (obsolete FYPO:0003018)","synonyms":[{"name":"elongated inviable cell during cellular response to non-ionic osmotic stress during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"inviable elongated vegetative cell during cellular response to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell during cellular response to non-ionic osmotic stress","type":"exact"}],"termid":"FYPO:0003018"}


id: PBO:0029566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_structure","termid":"PBO:0029566"}


id: MOD:01736
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01736"}


id: PBO:0076771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 10","termid":"PBO:0076771"}


id: GO:0001064
data:
  {"annotated_genes":["SJAG_03014"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001065"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a single-subunit-type RNA polymerase-specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed 5'-3' RNA polymerase activity","termid":"GO:0003899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"single subunit type RNA polymerase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"T3/T7 type RNA polymerase activity","type":"exact"}],"termid":"GO:0001064","terms_by_termid":{"GO:0001065":null}}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: MOD:01597
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-116 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-116 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01597"}


id: MONDO:0700227
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85328,85327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","definition":"Any maculopathy caused by a variant in the ELOVL4 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ELOVL4-related maculopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"ELOVL4-related maculopathy","type":"exact"}],"termid":"MONDO:0700227","terms_by_termid":{"MONDO:0010819":null},"xrefs":{"Monarch":{"xref_id":"0700227"}}}


id: PBO:0050069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor 13","termid":"PBO:0050069"}


id: MONDO:0043174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pfeiffer Tietze Welte syndrome","secondary_identifiers":["MESH:C537891","UMLS:C2931657","MEDGEN:419859"],"synonyms":[{"name":"sagittal craniostenosis, bilateral coloboma of the iris, craniofacial dysmorphy, asymmetrical split hand malformation, bilateral syndactyly of 2nd-4th","type":"related"}],"termid":"MONDO:0043174","xrefs":{"Monarch":{"xref_id":"0043174"}}}


id: PBO:0002398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine-tRNA ligase (predicted)","termid":"PBO:0002398"}


id: GO:0102675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 24-ethylidenelophenol + a demethylated methyl acceptor = avenasterol + a methylated methyl acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete C4-methyltransferase activity (obsolete GO:0102675)","termid":"GO:0102675"}


id: PBO:0110366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR pathway substrate 8, signaling adaptor","termid":"PBO:0110366"}


id: PATO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm lacking pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular rhythm","termid":"PATO:0001845"}


id: PBO:0063853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol binding clathrin assembly protein","termid":"PBO:0063853"}


id: PBO:0051532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 3","termid":"PBO:0051532"}


id: PBO:0055686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyltransferase 1 pseudogene 1","termid":"PBO:0055686"}


id: PBO:0091845
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene product is often automatically annotated to the NADH dehydrogenase of the mitochondrial respiratory chain complex I. However, fission yeast lacks the remaining 40 subunits found in mammals","termid":"PBO:0091845"}


id: GO:1900045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein K63-linked ubiquitination","termid":"GO:1900044"},{"relation_name":"is_a","term_name":"negative regulation of protein polyubiquitination","termid":"GO:1902915"},{"relation_name":"negatively_regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein K63-linked ubiquitination","synonyms":[{"name":"down regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"down regulation of protein K63-linked ubiquitination","type":"related"},{"name":"down-regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"down-regulation of protein K63-linked ubiquitination","type":"related"},{"name":"downregulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"downregulation of protein K63-linked ubiquitination","type":"related"},{"name":"inhibition of protein K63-linked polyubiquitination","type":"exact"},{"name":"inhibition of protein K63-linked ubiquitination","type":"related"},{"name":"negative regulation of protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:1900045"}


id: PBO:0053890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1170","termid":"PBO:0053890"}


id: PBO:0084619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine aminopeptidase; catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map1p","termid":"PBO:0084619"}


id: PBO:0027659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_cellular_response_to_hydroxyurea","termid":"PBO:0027659"}


id: PBO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)/OR22-1 (pseudogene)","termid":"PBO:0051477"}


id: PR:Q10440
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- emi5 gene.","definition_xrefs":["UniProtKB:Q10440","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase assembly factor 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.06c","synonyms":[{"name":"SDH assembly factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SDHAF2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-emi5","type":"exact"}],"termid":"PR:Q10440"}


id: FYPO:0002034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase type I activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal DNA topoisomerase type I activity","termid":"FYPO:0002034"}


id: GO:0015183
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95760],"is_not":false,"summary":null,"term":"GO:0015183"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-aspartate from one side of a membrane to the other. L-aspartate is the anion derived from aspartic acid.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:go_curators","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"acidic amino acid transmembrane transporter activity","termid":"GO:0015172"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-aspartate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-aspartate transporter activity","type":"broad"},{"name":"glutamate/aspartate porter activity","type":"narrow"},{"name":"glutamate/aspartate:sodium symporter activity","type":"narrow"}],"termid":"GO:0015183","terms_by_termid":{"GO:0015183":null}}


id: PBO:0017691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein Sgd1 (predicted)","termid":"PBO:0017691"}


id: GO:0097353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the areas along the centrolateral axis are established that will lead to differences in cell differentiation, or in which cells interpret a specific environment.","definition_xrefs":["GOC:dsz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"centrolateral pattern formation","synonyms":[{"name":"mediolateral pattern formation","type":"exact"}],"termid":"GO:0097353"}


id: MONDO:0011930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epilepsy, familial adult myoclonic in which the cause of the disease is a mutation in the ADRA2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign adult familial myoclonic epilepsy","termid":"MONDO:0019448"},{"relation_name":"is_a","term_name":"epilepsy, familial adult myoclonic","termid":"MONDO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial adult myoclonic, 2","secondary_identifiers":["GARD:18083","MEDGEN:375031","UMLS:C1842852","MESH:C564313","OMIM:607876","DOID:0111692"],"synonyms":[{"name":"ADRA2B epilepsy, familial adult myoclonic","type":"exact"},{"name":"FAME2","type":"related"},{"name":"benign adult familial myoclonic epilepsy 2","type":"related"},{"name":"cortical myoclonic tremor with epilepsy, familial, 2","type":"related"},{"name":"cortical myoclonus and epilepsy, autosomal dominant","type":"related"},{"name":"epilepsy, familial ADULT myoclonic, 2","type":"related"},{"name":"epilepsy, familial adult myoclonic caused by mutation in ADRA2B","type":"exact"},{"name":"epilepsy, familial adult myoclonic, 2","type":"exact"},{"name":"epilepsy, familial adult myoclonic, type 2","type":"exact"}],"termid":"MONDO:0011930","xrefs":{"Monarch":{"xref_id":"0011930"}}}


id: PBO:0069492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 759, pseudogene","termid":"PBO:0069492"}


id: SO:0001664
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A discontinuous core element of RNA polymerase II transcribed genes, situated downstream of the TSS. It is composed of three sub elements: SI, SII and SIII.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCE","synonyms":[{"name":"downstream core element","type":"related"}],"termid":"SO:0001664"}


id: PR:Q10316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arc5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.04c","synonyms":[{"name":"Spom972h-arc5","type":"exact"},{"name":"arp2/3 complex 16 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p16-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10316"}


id: PBO:0043138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 6","termid":"PBO:0043138"}


id: GO:0008776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate = ADP + acetyl phosphate.","definition_xrefs":["EC:2.7.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"acetate kinase activity","secondary_identifiers":["RHEA:11352","MetaCyc:ACETATEKIN-RXN"],"synonyms":[{"name":"AK activity","type":"related"},{"name":"ATP:acetate phosphotransferase activity","type":"related"},{"name":"AckA","type":"related"},{"name":"acetate kinase (phosphorylating) activity","type":"related"},{"name":"acetic kinase activity","type":"related"},{"name":"acetokinase activity","type":"related"}],"termid":"GO:0008776"}


id: PBO:0090738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin binding FHA domain protein Tos4","termid":"PBO:0090738"}


id: GO:0004129
data:
  {"annotated_genes":["SJAG_01355","SJAG_01190","SJAG_03337","SJAG_00976","SJAG_02504","SJAG_01077","SJAG_MIT04","SJAG_MIT13","SJAG_07007","SJAG_MIT20","SJAG_05629"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87411,88432,91151,107437,113360,113791,114592,115953,118153,118174,118175,118202,118203],"is_not":false,"summary":null,"term":"GO:0004129"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["RHEA:11436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02504":null,"SJAG_03337":null,"SJAG_05629":null,"SJAG_07007":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0005215","GO:0022857","GO:0016491"],"is_obsolete":false,"name":"cytochrome-c oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CYTOCHROME-C-OXIDASE-RXN","Reactome:R-HSA-163214","EC:7.1.1.9"],"synonyms":[{"name":"Warburg's respiratory enzyme activity","type":"related"},{"name":"aa3-type cytochrome c oxidase","type":"narrow"},{"name":"ba3-type cytochrome c oxidase","type":"narrow"},{"name":"caa3-type cytochrome c oxidase","type":"narrow"},{"name":"cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"cytochrome a3 activity","type":"narrow"},{"name":"cytochrome aa3 activity","type":"narrow"},{"name":"cytochrome c oxidase activity","type":"exact"},{"name":"cytochrome oxidase activity","type":"related"},{"name":"indophenol oxidase","type":"narrow"},{"name":"indophenolase","type":"narrow"}],"termid":"GO:0004129","terms_by_termid":{"GO:0004129":null}}


id: PBO:0056061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 1","termid":"PBO:0056061"}


id: MONDO:0007582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cockayne syndrome B (obsolete MONDO:0007582)","termid":"MONDO:0007582","xrefs":{"Monarch":{"xref_id":"0007582"}}}


id: GO:0034588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of piRNAs, Piwi-associated RNAs, a class of 24- to 30-nucleotide RNA derived from repeat or complex DNA sequence elements and processed by a Dicer-independent mechanism.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete piRNA catabolic process (obsolete GO:0034588)","synonyms":[{"name":"Piwi-associated RNA catabolic process","type":"exact"},{"name":"piRNA breakdown","type":"exact"},{"name":"piRNA catabolism","type":"exact"},{"name":"piRNA degradation","type":"exact"}],"termid":"GO:0034588"}


id: GO:1902792
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of pyrroline-5-carboxylate reductase activity.","definition_xrefs":["PMID:2722838","GO_REF:0000088","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase complex","termid":"GO:1902792"}


id: SO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from proplastid sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"proplastid_sequence","termid":"SO:0000748"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proplastid_gene","synonyms":[{"name":"proplastid gene","type":"exact"}],"termid":"SO:0000096"}


id: MONDO:0015137
data:
  {"annotated_genes":["SJAG_01474","SJAG_00321","SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[85976,85975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[84299,84300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"}]},"cv_name":"mondo","definition":"Fevers of unknown etiology recurring over months or years.","definition_xrefs":["NCIT:C118240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"is_obsolete":false,"name":"periodic fever syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10034533","MEDGEN:855463","UMLS:C3889979","Orphanet:101995","GARD:19812"],"termid":"MONDO:0015137","terms_by_termid":{"MONDO:0009849":null,"MONDO:0012481":null,"MONDO:0013766":null},"xrefs":{"Monarch":{"xref_id":"0015137"}}}


id: PBO:0016116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ca2+/calmodulin-dependent (CaMMK)-like protein kinase Ssp1","termid":"PBO:0016116"}


id: PBO:0030122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_zinc_ion","termid":"PBO:0030122"}


id: GO:1902460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell proliferation.","definition_xrefs":["GOC:TermGenie","GOC:pm","PMID:18672106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"regulates","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell proliferation","synonyms":[{"name":"regulation of MSC proliferation","type":"exact"}],"termid":"GO:1902460"}


id: GO:0021659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 3. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 3 morphogenesis","termid":"GO:0021658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 structural organization","synonyms":[{"name":"rhombomere 3 structural organisation","type":"exact"}],"termid":"GO:0021659"}


id: PBO:0004123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain protein Btb2","termid":"PBO:0004123"}


id: PBO:0057194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR365B and MIR4725 host gene","termid":"PBO:0057194"}


id: MONDO:0017060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iniencephaly","termid":"MONDO:0018968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"open iniencephaly","secondary_identifiers":["icd11.foundation:1778329323","GARD:20949","Orphanet:268363","MEDGEN:608900","UMLS:C0431285","SCTID:203928008"],"termid":"MONDO:0017060","xrefs":{"Monarch":{"xref_id":"0017060"}}}


id: GO:0034254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of urea.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide catabolic process","termid":"GO:0034251"},{"relation_name":"is_a","term_name":"regulation of urea metabolic process","termid":"GO:0034255"},{"relation_name":"regulates","term_name":"urea catabolic process","termid":"GO:0043419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0008150","GO:0071941","GO:0044281"],"is_obsolete":false,"name":"regulation of urea catabolic process","synonyms":[{"name":"regulation of urea breakdown","type":"exact"},{"name":"regulation of urea catabolism","type":"exact"},{"name":"regulation of urea degradation","type":"exact"}],"termid":"GO:0034254"}


id: MONDO:0004783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete panhypopituitarism (obsolete MONDO:0004783)","termid":"MONDO:0004783","xrefs":{"Monarch":{"xref_id":"0004783"}}}


id: PBO:0064887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bbeta","termid":"PBO:0064887"}


id: MONDO:0035433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete calpain-3-related limb-girdle muscular dystrophy D4 (obsolete MONDO:0035433)","secondary_identifiers":["GARD:22272"],"termid":"MONDO:0035433","xrefs":{"Monarch":{"xref_id":"0035433"}}}


id: GO:1900938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900938"}


id: GO:0021641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the trochlear nerve. This process pertains to the physical shaping of a rudimentary structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"trochlear nerve morphogenesis","termid":"GO:0021639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve structural organization","synonyms":[{"name":"CN IV structural organization","type":"related"},{"name":"trochlear nerve structural organisation","type":"exact"}],"termid":"GO:0021641"}


id: SO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an EST sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST_match","synonyms":[{"name":"EST match","type":"exact"}],"termid":"SO:0000668"}


id: PATO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of single process inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity of occurrent","termid":"PATO:0001637"}


id: GO:0042417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine metabolic process","synonyms":[{"name":"dopamine metabolism","type":"exact"}],"termid":"GO:0042417"}


id: PBO:0039670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 4 subunit beta 1","termid":"PBO:0039670"}


id: GO:0035284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of the brain into a series of semi-repetitive parts or segments.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"},{"relation_name":"part_of","term_name":"central nervous system segmentation","termid":"GO:0035283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain segmentation","termid":"GO:0035284"}


id: PR:O60140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18H10.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18H10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.09","synonyms":[{"name":"Spom972h-SPBC18H10.09","type":"exact"}],"termid":"PR:O60140"}


id: GO:0006186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into dGDP, deoxyguanosine diphosphate, to produce dGTP.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete dGDP phosphorylation (obsolete GO:0006186)","termid":"GO:0006186"}


id: PBO:0057430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550a-3","termid":"PBO:0057430"}


id: PBO:0060012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 32","termid":"PBO:0060012"}


id: FYPO:0005758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication from late-firing origins is abnormal.","definition_xrefs":["PomBase:mah","GO:0101017","PMID:22987637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation from late origin","synonyms":[{"name":"abnormal regulation of DNA replication initiation from late origin during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of late origin firing timing","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation at late origin","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late origin during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late replication origin","type":"exact"}],"termid":"FYPO:0005758"}


id: PBO:0051935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain family member 6","termid":"PBO:0051935"}


id: PBO:0078756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 61B","termid":"PBO:0078756"}


id: GO:2000299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Rho-dependent protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"regulation of Rho-dependent protein serine/threonine kinase activity","termid":"GO:2000298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rho-dependent protein serine/threonine kinase activity","synonyms":[{"name":"negative regulation of ROCK kinase activity","type":"exact"},{"name":"negative regulation of Rho-associated protein kinase activity","type":"exact"}],"termid":"GO:2000299"}


id: GO:1902576
data:
  {"annotated_genes":["SJAG_01210","SJAG_03048","SJAG_01068","SJAG_02162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115983,108041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[101552,96965,108042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear cell cycle DNA replication.","definition_xrefs":["PMID:19033384","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of nuclear cell cycle DNA replication","termid":"GO:0033262"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"negative regulation of nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA replication during S phase","type":"related"},{"name":"down regulation of DNA replication involved in S phase","type":"exact"},{"name":"down regulation of DNA replication involved in S-phase","type":"exact"},{"name":"down regulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"down-regulation of DNA replication during S phase","type":"related"},{"name":"down-regulation of DNA replication involved in S phase","type":"exact"},{"name":"down-regulation of DNA replication involved in S-phase","type":"exact"},{"name":"down-regulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"downregulation of DNA replication during S phase","type":"related"},{"name":"downregulation of DNA replication involved in S phase","type":"exact"},{"name":"downregulation of DNA replication involved in S-phase","type":"exact"},{"name":"downregulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"inhibition of DNA replication during S phase","type":"related"},{"name":"inhibition of DNA replication involved in S phase","type":"narrow"},{"name":"inhibition of DNA replication involved in S-phase","type":"narrow"},{"name":"inhibition of nuclear cell cycle DNA replication","type":"narrow"},{"name":"negative regulation of DNA replication during S phase","type":"related"},{"name":"negative regulation of DNA replication involved in S phase","type":"exact"},{"name":"negative regulation of DNA replication involved in S-phase","type":"exact"}],"termid":"GO:1902576","terms_by_termid":{"GO:1903464":null,"GO:1903467":null}}


id: GO:0106100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of geranylgeranyl pyrophosphate (GGPP) to yield the monocyclic diterpene beta-pinacene.","definition_xrefs":["PMID:28696553","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"beta-pinacene synthase activity","termid":"GO:0106100"}


id: GO:0018010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: palmitoyl-CoA + glycoprotein = CoA + N-palmitoylglycoprotein.","definition_xrefs":["EC:2.3.1.96"],"gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein N-palmitoyltransferase activity (obsolete GO:0018010)","synonyms":[{"name":"mucus glycoprotein fatty acyltransferase","type":"narrow"},{"name":"palmitoyl-CoA:glycoprotein N-palmitoyltransferase activity","type":"related"}],"termid":"GO:0018010"}


id: GO:0046977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TAP protein, transporter associated with antigen processing protein. TAP protein is a heterodimeric peptide transporter consisting of the subunits TAP1 and TAP2.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TAP binding","termid":"GO:0046977"}


id: GO:0030352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,4,5,6-tetrakisphosphate + H2O = inositol-1,4,5-trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inositol-1,4,5,6-tetrakisphosphate 6-phosphatase activity","termid":"GO:0030352"}


id: GO:0052597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a diamine + H2O + O2 = a monoamine + NH4+ + H2O2.","definition_xrefs":["MetaCyc:RXN-9599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"diamine oxidase activity","synonyms":[{"name":"diamine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052597"}


id: GO:0000073
data:
  {"annotated_genes":["SJAG_00794","SJAG_04745","SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74950,93967,94504],"is_not":false,"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"The release of duplicated mitotic spindle pole bodies (SPBs) that begins with the nucleation of microtubules from each SPB within the nucleus, leading to V-shaped spindle microtubules. Interpolar microtubules that elongate from each pole are interconnected, forming overlapping microtubules. Capturing and antiparallel sliding apart of microtubules promotes the initial separation of the SPB.","definition_xrefs":["GOC:vw","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body separation","termid":"GO:0110100"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"},{"relation_name":"part_of","term_name":"mitotic spindle pole body organization","termid":"GO:1905047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0007010","GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"initial mitotic spindle pole body separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030475"],"termid":"GO:0000073","terms_by_termid":{"GO:0000073":null}}


id: PBO:0060630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 5 like","termid":"PBO:0060630"}


id: PR:Q9P7G9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylyl-sulfate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01978","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl-sulfate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.11","secondary_identifiers":["UniProtKB:Q9P7G9"],"synonyms":[{"name":"APS kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP adenosine-5'-phosphosulfate 3'-phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cysC","type":"exact"},{"name":"adenosine-5'-phosphosulfate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7G9"}


id: PBO:0050969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 4","termid":"PBO:0050969"}


id: MONDO:0000892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, invasive colon adenocarcinoma characterized by the presence of sheets of malignant epithelial cells with vesicular nuclei, prominent nucleoli, and abundant eosinophilic cytoplasm. It usually has a favorable prognosis.","definition_xrefs":["NCIT:C60641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"colorectal medullary carcinoma","termid":"MONDO:0020794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colon medullary carcinoma","secondary_identifiers":["ONCOTREE:CMC","MEDGEN:363630","UMLS:C1880119","DOID:0080183"],"synonyms":[{"name":"colon medullary carcinoma","type":"exact"},{"name":"medullary carcinoma of the colon","type":"related"},{"name":"medullary colon carcinoma","type":"related"}],"termid":"MONDO:0000892","xrefs":{"Monarch":{"xref_id":"0000892"}}}


id: PBO:0043831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 3","termid":"PBO:0043831"}


id: PBO:0057620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1184-3","termid":"PBO:0057620"}


id: PR:Q9P7Q9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alg9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase alg9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.05","synonyms":[{"name":"Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alg9","type":"exact"},{"name":"asparagine-linked glycosylation protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Q9"}


id: MOD:01503
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01503"}


id: PBO:0068929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 172, pseudogene","termid":"PBO:0068929"}


id: RO:0003000
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produces","termid":"RO:0003000"}


id: PBO:0030870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_contraction","termid":"PBO:0030870"}


id: MONDO:0009195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythema of acral regions","secondary_identifiers":["OMIM:227000","MEDGEN:384009","UMLS:C1856900"],"synonyms":[{"name":"erythema of acral regions","type":"exact"}],"termid":"MONDO:0009195","xrefs":{"Monarch":{"xref_id":"0009195"}}}


id: FYPO:0004178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell of the h+ mating type when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:8668157","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation in h+ cells","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation in h+ cells","type":"related"},{"name":"increased RNA level during nitrogen depletion in h+ cells","type":"exact"},{"name":"increased RNA level during nitrogen deprivation in h+ cells","type":"exact"},{"name":"increased transcript level during nitrogen starvation in h+ cells","type":"exact"}],"termid":"FYPO:0004178"}


id: PBO:0003949
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.11","termid":"PBO:0003949"}


id: GO:0050240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + pyrogallol = (Z)-5-oxohex-2-enedioate + 2 H+.","definition_xrefs":["EC:1.13.11.35","RHEA:19673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyrogallol 1,2-oxygenase activity","secondary_identifiers":["MetaCyc:PYROGALLOL-12-OXYGENASE-RXN","KEGG_REACTION:R03246"],"synonyms":[{"name":"1,2,3-trihydroxybenzene:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"pyrogallol 1,2-dioxygenase activity","type":"related"}],"termid":"GO:0050240"}


id: MOD:01219
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9254591","Unimod:286#D","PubMed:9750125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), heavy C13","termid":"MOD:00606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13 - site D","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:01219"}


id: PBO:0052380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 22","termid":"PBO:0052380"}


id: PBO:0056311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP2K5 divergent transcript","termid":"PBO:0056311"}


id: PBO:0064427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 4 pseudogene 1","termid":"PBO:0064427"}


id: PBO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial succinate dehydrogenase assembly factor 1 (predicted)","termid":"PBO:0001147"}


id: SO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence [5'-TCG(G/C)(A/T)xxTTxAA], bound by the transcription factor Pho7.","definition_xrefs":["PMID:28811350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho7_binding_site","synonyms":[{"name":"Pho7 binding site","type":"exact"}],"termid":"SO:0002216"}


id: PBO:0075481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily C member 1","termid":"PBO:0075481"}


id: GO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1,4-benzoquinone + H2O + phenylacetyl-CoA = 2 hydroquinone + phenylglyoxylyl-CoA.","definition_xrefs":["RHEA:15705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylacetyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:1.17.5.1-RXN","EC:1.17.5.1","KEGG_REACTION:R07222"],"synonyms":[{"name":"phenylacetyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"phenylacetyl-CoA:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0033789"}


id: PBO:0070769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 5","termid":"PBO:0070769"}


id: MONDO:0957048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated macular dystrophy","secondary_identifiers":["Orphanet:519302","UMLS:C5681367","MEDGEN:1842262","GARD:22097"],"termid":"MONDO:0957048","xrefs":{"Monarch":{"xref_id":"0957048"}}}


id: PBO:0084880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosome recycling factor; essential for mitochondrial protein synthesis and for the maintenance of the respiratory function of mitochondria","termid":"PBO:0084880"}


id: GO:0050551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = diphosphate + myrcene.","definition_xrefs":["RHEA:16965","EC:4.2.3.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"myrcene synthase activity","secondary_identifiers":["KEGG_REACTION:R02009","MetaCyc:RXN-5110"],"synonyms":[{"name":"geranyl-diphosphate diphosphate-lyase (myrcene-forming) activity","type":"exact"}],"termid":"GO:0050551"}


id: FYPO:0003019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, is abnormal. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["PomBase:mah","GO:0031952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein autophosphorylation during vegetative growth","synonyms":[{"name":"abnormal protein autophosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003019"}


id: PR:O13857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1A6.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C1A6.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.03c","synonyms":[{"name":"Spom972h-SPAC1A6.03c","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13857"}


id: GO:0030697
data:
  {"annotated_genes":["SJAG_04736"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97271],"is_not":false,"summary":null,"term":"GO:0030697"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + uridine54 in tRNA = 5-methyluridine54 in tRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:42712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRNA-URACIL-5--METHYLTRANSFERASE-RXN","EC:2.1.1.35","GO:0009021"],"synonyms":[{"name":"M5U-methyltransferase activity","type":"related"},{"name":"RUMT","type":"broad"},{"name":"RUMT activity","type":"related"},{"name":"S-adenosyl methionine-dependent tRNA (m5U54) methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:tRNA (uracil-5-)-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity","type":"exact"},{"name":"ribothymidyl synthase activity","type":"broad"},{"name":"tRNA (uracil(54)-C(5))-methyltransferase activity, S-adenosyl methionine-dependent","type":"exact"},{"name":"tRNA (uracil-5-)-methyltransferase activity","type":"broad"},{"name":"tRNA uracil 5-methyltransferase activity","type":"related"},{"name":"tRNA:m(5)U54-methyltransferase activity","type":"related"},{"name":"tRNA:m5U54-methyltransferase activity","type":"related"},{"name":"transfer RNA uracil 5-methyltransferase activity","type":"related"},{"name":"transfer RNA uracil methylase activity","type":"related"}],"termid":"GO:0030697","terms_by_termid":{"GO:0030697":null}}


id: MONDO:0015559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive systemic mastocytosis","termid":"MONDO:0020333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"lymphoadenopathic mastocytosis with eosinophilia","secondary_identifiers":["Orphanet:158793","icd11.foundation:809306056"],"termid":"MONDO:0015559","xrefs":{"Monarch":{"xref_id":"0015559"}}}


id: MONDO:0700026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 22 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 disorder","termid":"MONDO:0700026","xrefs":{"Monarch":{"xref_id":"0700026"}}}


id: GO:0017190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal aspartic acid of proteins; catalyzed by aspartate N-acetyltransferase.","definition_xrefs":["RESID:AA0042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-aspartic acid acetylation","termid":"GO:0017190"}


id: PR:P40373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.05c","secondary_identifiers":["UniProtKB:P40373"],"synonyms":[{"name":"ATP-PRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-PRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hisG","type":"exact"}],"termid":"PR:P40373"}


id: MONDO:0004498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that arises from the meninges of the sacral region of the spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sacral spinal canal and spinal cord meningioma","secondary_identifiers":["DOID:8203","UMLS:C1335893","MEDGEN:277626","NCIT:C5299"],"synonyms":[{"name":"meningioma of sacral spinal canal and spinal cord","type":"exact"},{"name":"meningioma of the sacral spinal canal and spinal cord","type":"exact"},{"name":"sacral intraspinal meningioma","type":"exact"}],"termid":"MONDO:0004498","xrefs":{"Monarch":{"xref_id":"0004498"}}}


id: MONDO:0020758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0020758 (obsolete MONDO:0020758)","termid":"MONDO:0020758","xrefs":{"Monarch":{"xref_id":"0020758"}}}


id: GO:0072253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerulus cell differentiation","termid":"GO:0072251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerulus cell fate commitment","termid":"GO:0072253"}


id: GO:0005974
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrinogen gamma chain (obsolete GO:0005974)","synonyms":[{"name":"fibrinogen gamma chain","type":"exact"}],"termid":"GO:0005974"}


id: PBO:0056886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake 1","termid":"PBO:0056886"}


id: PBO:0046916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 30 member C","termid":"PBO:0046916"}


id: PBO:0088063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase subunit of the CCR4-NOT complex; with Ubc4p, ubiquitinates nascent polypeptide-associated complex subunits and histone demethyase Jhd2p; CCR4-NOT has roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication","termid":"PBO:0088063"}


id: GO:0045939
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"negatively_regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of steroid metabolic process","type":"exact"},{"name":"down-regulation of steroid metabolic process","type":"exact"},{"name":"downregulation of steroid metabolic process","type":"exact"},{"name":"inhibition of steroid metabolic process","type":"narrow"},{"name":"negative regulation of steroid metabolism","type":"exact"}],"termid":"GO:0045939","terms_by_termid":{"GO:0010895":null}}


id: MONDO:0007508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of ectodermal dysplasia characterized by the association of anhidrotic ectodermal dysplasia with cleft lip/palate.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"cleft lip","termid":"MONDO:0004747"},{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations","termid":"MONDO:1040001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"Rapp-Hodgkin syndrome","secondary_identifiers":["Orphanet:3022","icd11.foundation:1455333054","GARD:5690","MESH:C535289","UMLS:C1785148","DOID:0060330","SCTID:7731005","MEDGEN:315656","OMIM:129400"],"synonyms":[{"name":"OFC8, included","type":"related"},{"name":"RHS","type":"related"},{"name":"Rapp-Hodgkin ectodermal dysplasia syndrome","type":"related"},{"name":"Rapp-Hodgkin syndrome","type":"exact"},{"name":"anhidrotic ectodermal dysplasia with cleft lip/palate","type":"exact"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 8","type":"related"},{"name":"ectodermal dysplasia, anhidrotic, with cleft Lip/palate","type":"related"},{"name":"ectodermal dysplasia, anhidrotic, with cleft lip-palate","type":"related"},{"name":"orofacial cleft 8","type":"related"}],"termid":"MONDO:0007508","xrefs":{"Monarch":{"xref_id":"0007508"}}}


id: PBO:0064036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 70","termid":"PBO:0064036"}


id: PATO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with low wavelength of that portion of the visible spectrum lying between green and indigo, evoked in the human observer by radiant energy with wavelengths of approximately 420 to 490 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue","termid":"PATO:0000318"}


id: PBO:0049059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 65","termid":"PBO:0049059"}


id: MONDO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the liver.","definition_xrefs":["NCIT:C5750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"},{"relation_name":"is_a","term_name":"hepatobiliary benign neoplasm","termid":"MONDO:0859689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver lipoma","secondary_identifiers":["UMLS:C1333970","DOID:10190","MEDGEN:232277"],"synonyms":[{"name":"hepatic lipoma","type":"exact"},{"name":"lipoma of liver","type":"exact"},{"name":"lipoma of the liver","type":"exact"},{"name":"liver lipoma","type":"exact"}],"termid":"MONDO:0000965","xrefs":{"Monarch":{"xref_id":"0000965"}}}


id: GO:1903359
data:
  {"annotated_genes":["SJAG_04947","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99275,103707],"is_not":false,"summary":null,"term":"GO:1903359"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a lateral cortical node.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"lateral cortical node assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Skb1-containing cortical node assembly","type":"exact"},{"name":"Skb1-containing cortical node formation","type":"exact"},{"name":"lateral cortical node formation","type":"exact"}],"termid":"GO:1903359","terms_by_termid":{"GO:1903359":null}}


id: MONDO:0019978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Robinow syndrome (RS) is a rare genetic syndrome characterized by limb shortening and abnormalities of the head, face and external genitalia.","definition_xrefs":["Orphanet:97360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Robinow syndrome","secondary_identifiers":["DOID:0060254","UMLS:C0265205","MEDGEN:78535","icd11.foundation:1010745722","NCIT:C85048","NORD:1673","GARD:312","OMIMPS:268310"],"synonyms":[{"name":"Covesdem syndrome (formerly)","type":"related"},{"name":"Robinow dwarfism","type":"exact"},{"name":"Robinow-Silverman-Smith syndrome","type":"exact"},{"name":"acral dysostosis with facial and genital abnormalities","type":"exact"},{"name":"costovertebral segmentation defect with mesomelia (formerly)","type":"related"},{"name":"fetal face syndrome","type":"exact"},{"name":"foetal face syndrome","type":"exact"},{"name":"mesomelic dwarfism-small genitalia syndrome","type":"exact"}],"termid":"MONDO:0019978","xrefs":{"Monarch":{"xref_id":"0019978"}}}


id: GO:0042428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"},{"relation_name":"is_a","term_name":"ammonium ion metabolic process","termid":"GO:0097164"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serotonin metabolic process","synonyms":[{"name":"serotonin metabolism","type":"exact"}],"termid":"GO:0042428"}


id: PR:Q8TFH6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eos1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFH6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein eos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.08","synonyms":[{"name":"Spom972h-eos1","type":"exact"}],"termid":"PR:Q8TFH6"}


id: PR:O94592
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.02 gene.","definition_xrefs":["UniProtKB:O94592","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.02","synonyms":[{"name":"Spom972h-SPCC622.02","type":"exact"}],"termid":"PR:O94592"}


id: PBO:0049319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GS homeobox 1","termid":"PBO:0049319"}


id: GO:0005551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin (obsolete GO:0005551)","termid":"GO:0005551"}


id: FYPO:0002845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and contains one or more septa. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable swollen elongated vegetative cell","termid":"FYPO:0002251"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable swollen elongated septated vegetative cell","synonyms":[{"name":"inviable enlarged elongated septated vegetative cell with enlarged nucleus","type":"related"},{"name":"inviable large elongated septated vegetative cell","type":"related"},{"name":"lethal; swollen elongated septated vegetative cell","type":"exact"}],"termid":"FYPO:0002845"}


id: GO:0061015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of snRNA, small nuclear ribonucleic acid into the nucleus.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA import into nucleus","termid":"GO:0006404"},{"relation_name":"is_a","term_name":"snRNA transport","termid":"GO:0051030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"snRNA import into nucleus","termid":"GO:0061015"}


id: GO:1904597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of wound healing connective tissue replacement, which may be replaced with fibrotic material, that occurs as part of an inflammatory response.","definition_xrefs":["GO_REF:0000058","GOC:krc","GOC:TermGenie","PMID:18245812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of connective tissue replacement involved in inflammatory response wound healing","termid":"GO:1904596"},{"relation_name":"is_a","term_name":"negative regulation of connective tissue replacement","termid":"GO:1905204"},{"relation_name":"negatively_regulates","term_name":"connective tissue replacement involved in inflammatory response wound healing","termid":"GO:0002248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"down regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"down regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"down regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"down-regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"down-regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"down-regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"downregulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"downregulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"downregulation of fibrosis during inflammatory response","type":"narrow"},{"name":"inhibition of connective tissue replacement during inflammatory response","type":"related"},{"name":"inhibition of connective tissue replacement involved in inflammatory response wound healing","type":"narrow"},{"name":"inhibition of fibrosis during inflammatory response","type":"narrow"},{"name":"negative regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"negative regulation of fibrosis during inflammatory response","type":"narrow"}],"termid":"GO:1904597"}


id: PATO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"quality","termid":"PATO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative","termid":"PATO:0000068"}


id: PBO:0062598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 8 pseudogene","termid":"PBO:0062598"}


id: FYPO:0002819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at telomere during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 acetylation at telomeric region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at telomere during vegetative growth","type":"exact"},{"name":"increased telomeric histone H3K9 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002819"}


id: MONDO:0859305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with eye movement abnormalities and ataxia","secondary_identifiers":["DOID:0081275","MEDGEN:1824014","UMLS:C5774241","OMIM:620094"],"termid":"MONDO:0859305","xrefs":{"Monarch":{"xref_id":"0859305"}}}


id: MONDO:0009620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Say-Barber-Miller syndrome is characterized by the association of unusual facial features, microcephaly, developmental delay, and severe postnatal growth retardation.","definition_xrefs":["Orphanet:3132"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Say-Barber-Miller syndrome","secondary_identifiers":["MESH:C536618","GARD:239","SCTID:721903007","OMIM:251240","MEDGEN:343258","UMLS:C1855078"],"synonyms":[{"name":"Say Barber Miller syndrome","type":"related"},{"name":"microcephaly hypogammaglobulinemia abnormal immunity","type":"related"},{"name":"microcephaly with chemotactic defect and transient hypogammaglobulinemia","type":"related"},{"name":"microcephaly-hypogammaglobulinemia-abnormal immunity syndrome","type":"exact"}],"termid":"MONDO:0009620","xrefs":{"Monarch":{"xref_id":"0009620"}}}


id: PBO:0080577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR4 pseudogene 1","termid":"PBO:0080577"}


id: GO:0018117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an adenylyl group (adenosine 5'-monophosphate; AMP) to a protein amino acid.","definition_xrefs":["GOC:ai","PMID:21607083","GOC:jsg","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein adenylylation","secondary_identifiers":["GO:0018176"],"synonyms":[{"name":"protein AMPylation","type":"exact"},{"name":"protein adenylation","type":"exact"},{"name":"protein amino acid adenylylation","type":"exact"}],"termid":"GO:0018117"}


id: PBO:0012590
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human NF1","termid":"PBO:0012590"}


id: SO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory sequence found in the 5' and 3' UTRs of many mRNAs which encode iron-binding proteins. It has a hairpin structure and is recognized by trans-acting proteins known as iron-regulatory proteins.","definition_xrefs":["PMID:3198610","PMID:8710843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron_responsive_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Iron_responsive_element"],"synonyms":[{"name":"IRE","type":"exact"},{"name":"iron responsive element","type":"exact"}],"termid":"SO:0001182"}


id: PBO:0038951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiponectin, C1Q and collagen domain containing","termid":"PBO:0038951"}


id: PBO:0065417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 4","termid":"PBO:0065417"}


id: PBO:0085092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome exonuclease component; has 3'-5' exonuclease activity that is regulated by Lrp1p; involved in RNA processing, maturation, surveillance, degradation, tethering, and export; role in sn/snoRNAs precursor degradation; forms a stable heterodimer with Lrp1p; has similarity to E. coli RNase D and to human PM-Sc1 100 (EXOSC10); mutant displays reduced transcription elongation in the G-less-based","termid":"PBO:0085092"}


id: MONDO:0022895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis cleft lip palate arthrogryposis","secondary_identifiers":["GARD:1590"],"termid":"MONDO:0022895","xrefs":{"Monarch":{"xref_id":"0022895"}}}


id: PBO:0076373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1 (MAP3K7) binding protein 1","termid":"PBO:0076373"}


id: GO:0004687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myosin-light-chain = ADP + myosin-light-chain phosphate.","definition_xrefs":["EC:2.7.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0003674","GO:0003824","GO:0004672","GO:0016740"],"is_obsolete":false,"name":"myosin light chain kinase activity","secondary_identifiers":["Reactome:R-HSA-5668978","RHEA:22004","MetaCyc:2.7.11.18-RXN","Reactome:R-HSA-445813"],"synonyms":[{"name":"ATP:myosin-light-chain O-phosphotransferase","type":"broad"},{"name":"ATP:myosin-light-chain O-phosphotransferase activity","type":"related"},{"name":"MLCK","type":"related"},{"name":"MLCkase activity","type":"related"},{"name":"STK18","type":"related"},{"name":"calcium/calmodulin-dependent myosin light chain kinase activity","type":"related"},{"name":"myosin kinase activity","type":"related"},{"name":"myosin light chain protein kinase activity","type":"related"},{"name":"myosin light-chain kinase","type":"broad"},{"name":"myosin light-chain kinase (phosphorylating)","type":"related"},{"name":"myosin light-chain kinase (phosphorylating) activity","type":"related"},{"name":"myosin light-chain kinase activity","type":"related"},{"name":"myosin-light-chain kinase activity","type":"exact"},{"name":"smooth-muscle-myosin-light-chain kinase activity","type":"narrow"}],"termid":"GO:0004687"}


id: GO:0099545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}


id: MONDO:0044635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"DIAPH1-related sensorineural hearing loss-thrombocytopenia syndrome","secondary_identifiers":["GARD:17904","MEDGEN:1798888","Orphanet:494444","UMLS:C5567465"],"synonyms":[{"name":"DIAPH1-related sensorineural hearing loss-thrombocytopenia syndrome","type":"exact"}],"termid":"MONDO:0044635","xrefs":{"Monarch":{"xref_id":"0044635"}}}


id: MONDO:0005015
data:
  {"annotated_genes":["SJAG_04206","SJAG_04495","SJAG_00214","SJAG_02426","SJAG_02013","SJAG_04334","SJAG_04394","SJAG_00092","SJAG_02012","SJAG_03247","SJAG_02000"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86568,86567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014488"},{"annotations":[86491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[84369,84368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[85638,85639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[86494,84365,86495,84364,84366,86493,84367,84363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005148"}]},"cv_name":"mondo","definition":"A metabolic disorder characterized by abnormally high blood sugar levels due to diminished production of insulin or insulin resistance/desensitization.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00214":null,"SJAG_02000":null,"SJAG_02012":null,"SJAG_02013":null,"SJAG_02426":null,"SJAG_03247":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"diabetes mellitus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0011849","NANDO:2100157","NANDO:2100158","DOID:9351","MEDGEN:8350","icd11.foundation:465177735","NCIT:C2985","MESH:D003920","HP:0000819","SCTID:73211009","ICD10CM:E08-E13","EFO:0000400","ICD9:250"],"synonyms":[{"name":"DM","type":"exact"},{"name":"diabetes","type":"exact"},{"name":"diabetes mellitus","type":"exact"},{"name":"diabetes mellitus (disease)","type":"exact"}],"termid":"MONDO:0005015","terms_by_termid":{"MONDO:0005148":null,"MONDO:0007453":null,"MONDO:0014488":null,"MONDO:0014674":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0005015"}}}


id: SO:0000322
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence targeted by a nuclease enzyme that is found cleaved more than would be expected by chance.","direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_sensitive_site","termid":"SO:0000684"},{"relation_name":"is_a","term_name":"accessible_DNA_region","termid":"SO:0002331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease_hypersensitive_site","synonyms":[{"name":"nuclease hypersensitive site","type":"exact"}],"termid":"SO:0000322"}


id: GO:0120277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cerebral blood circulation.","definition_xrefs":["GOC:krc","PMID:25397684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cerebral blood circulation","termid":"GO:0120276"},{"relation_name":"is_a","term_name":"positive regulation of blood circulation","termid":"GO:1903524"},{"relation_name":"positively_regulates","term_name":"cerebral blood circulation","termid":"GO:0120275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cerebral blood circulation","synonyms":[{"name":"activation of cerebral blood circulation","type":"narrow"},{"name":"positive regulation of cerebrum blood circulation","type":"exact"},{"name":"positive regulation of telencephalon blood circulation","type":"exact"},{"name":"up regulation of cerebral blood circulation","type":"exact"},{"name":"up-regulation of cerebral blood circulation","type":"exact"},{"name":"upregulation of cerebral blood circulation","type":"exact"}],"termid":"GO:0120277"}


id: PBO:0017705
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CDC43","termid":"PBO:0017705"}


id: MONDO:0023577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharophimosis","termid":"MONDO:0001008"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Krieble Bixler syndrome","secondary_identifiers":["MESH:C537619","MEDGEN:419107","UMLS:C2931550"],"synonyms":[{"name":"autosomal dominant blepharophimosis with multiple congenital anomalies","type":"related"}],"termid":"MONDO:0023577","xrefs":{"Monarch":{"xref_id":"0023577"}}}


id: GO:0060598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the terminal end of a mammary duct bifurcates.","definition_xrefs":["GOC:dph","PMID:17120154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichotomous subdivision of an epithelial terminal unit","termid":"GO:0060600"},{"relation_name":"part_of","term_name":"branch elongation involved in mammary gland duct branching","termid":"GO:0060751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis","synonyms":[{"name":"primary mammary duct branching","type":"exact"}],"termid":"GO:0060598"}


id: MOD:01882
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the carbonyl of an amino acid residue at position n with the alpha amino of a glycine residue at position n+2 to form a 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"}


id: MONDO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract disease in which the cataract contains some transparent protein","definition_xrefs":["Wikipedia:Cataract"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"immature cataract","secondary_identifiers":["UMLS:C2960113","DOID:10997","MEDGEN:755282","SCTID:446474007","icd11.foundation:1444156961"],"synonyms":[{"name":"incipient cataract","type":"exact"},{"name":"incipient senile cataract","type":"exact"},{"name":"water clefts","type":"exact"}],"termid":"MONDO:0001175","xrefs":{"Monarch":{"xref_id":"0001175"}}}


id: PBO:0061495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nurim","termid":"PBO:0061495"}


id: PBO:0046639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 20","termid":"PBO:0046639"}


id: FYPO:0002548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4'-phosphopantothenate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 4'-phosphopantothenate level","synonyms":[{"name":"increased 4'-phosphopantothenate accumulation","type":"related"},{"name":"increased cellular 4'-phosphopantothenate level during mitotic cell cycle","type":"related"},{"name":"increased cellular 4'-phosphopantothenate level during vegetative growth","type":"exact"}],"termid":"FYPO:0002548"}


id: PBO:0063804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHKA2 antisense RNA 1","termid":"PBO:0063804"}


id: PBO:0059251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L20","termid":"PBO:0059251"}


id: PBO:0080593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 20","termid":"PBO:0080593"}


id: FYPO:0001749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tacrolimus when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to tacrolimus","termid":"FYPO:0000086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to tacrolimus during salt stress","synonyms":[{"name":"hypersensitive to tacrolimus during salt stress","type":"exact"},{"name":"sensitive to FK506 during salt stress","type":"exact"},{"name":"sensitive to tacrolimus during salt stress during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus during salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001749"}


id: PATO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000800 muscle strength value (obsolete PATO:0000800)","termid":"PATO:0000800"}


id: GO:0030934
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any collagen complex which links one collagen assembly, such as a collagen fibril or sheet, to other structures.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"anchoring collagen complex","synonyms":[{"name":"connecting collagen","type":"exact"},{"name":"linking collagen","type":"exact"}],"termid":"GO:0030934"}


id: GO:0035554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The signaling process in which signaling from the receptor ROBO is brought to an end, rather than being reversibly modulated.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of signal transduction","termid":"GO:0023021"},{"relation_name":"is_a","term_name":"negative regulation of Roundabout signaling pathway","termid":"GO:0035387"},{"relation_name":"part_of","term_name":"Roundabout signaling pathway","termid":"GO:0035385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"termination of Roundabout signal transduction","termid":"GO:0035554"}


id: PBO:0045638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 50 (pseudogene)","termid":"PBO:0045638"}


id: MONDO:0013391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peroxisomal neurodegenerative disorder characterized by spasmodic torticollis, dystonic head tremor, intention tremor, nystagmus, hyposmia, and hypergonadotrophic hypogonadism with azoospermia. Slight cerebellar signs (left-sided intention tremor, balance and gait impairment) are also noted. Magnetic resonance imaging (MRI) shows bilateral hyperintense signals in the thalamus, butterfly-like lesions in the pons, and lesions in the occipital region, whereas nerve conduction studies of the lower extremities shows a predominantly motor and slight sensory neuropathy.","definition_xrefs":["Orphanet:163684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"sterol carrier protein 2 deficiency","secondary_identifiers":["MEDGEN:462340","GARD:12471","NANDO:1200767","OMIM:613724","UMLS:C3150990"],"synonyms":[{"name":"LKDMN","type":"related"},{"name":"SCP2 deficiency","type":"exact"},{"name":"leukoencephalopathy - dystonia - motor neuropathy","type":"related"},{"name":"leukoencephalopathy with dystonia and motor neuropathy","type":"related"},{"name":"leukoencephalopathy-dystonia-motor neuropathy syndrome","type":"exact"},{"name":"sterol carrier protein 2 deficiency","type":"exact"}],"termid":"MONDO:0013391","xrefs":{"Monarch":{"xref_id":"0013391"}}}


id: PBO:0049108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 165, pseudogene","termid":"PBO:0049108"}


id: PATO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's being composed of or possessing inorganic material.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mineralized","termid":"PATO:0002444"}


id: GO:0048864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stem cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to its specific fate.","definition_xrefs":["GOC:isa_complete","CL:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell development","termid":"GO:0048864"}


id: GO:0016662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","secondary_identifiers":["EC:1.7.2.-"],"termid":"GO:0016662"}


id: MONDO:0021076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the epithelial cells of the exocrine pancreatic tissue.","definition_xrefs":["NCIT:C4445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic exocrine neoplasm","secondary_identifiers":["UMLS:C0345920","SCTID:254604005","ICD9:235.5","MEDGEN:138030"],"synonyms":[{"name":"exocrine pancreas neoplasm","type":"exact"},{"name":"exocrine pancreas neoplasm (disease)","type":"exact"},{"name":"exocrine pancreas tumor","type":"exact"},{"name":"exocrine pancreas tumour","type":"exact"},{"name":"neoplasm of exocrine pancreas","type":"exact"},{"name":"neoplasm of the exocrine pancreas","type":"exact"},{"name":"pancreatic exocrine neoplasm","type":"exact"},{"name":"pancreatic exocrine tumor","type":"exact"},{"name":"pancreatic exocrine tumour","type":"exact"},{"name":"tumor of exocrine pancreas","type":"exact"},{"name":"tumor of the exocrine pancreas","type":"exact"},{"name":"tumour of exocrine pancreas","type":"exact"},{"name":"tumour of the exocrine pancreas","type":"exact"}],"termid":"MONDO:0021076","xrefs":{"Monarch":{"xref_id":"0021076"}}}


id: PBO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Uap56","termid":"PBO:0002139"}


id: MONDO:0007283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYBA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 42","secondary_identifiers":["OMIM:115900","MEDGEN:859891","DOID:0110237","UMLS:C4011454"],"synonyms":[{"name":"A cataract that has_material_basis_in heterozygous mutation in the CRYBA2 gene on chromosome 2q35.","type":"exact"},{"name":"CRYBA2 early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT42","type":"exact"},{"name":"cataract 42","type":"exact"},{"name":"cataract type 42","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYBA2","type":"exact"}],"termid":"MONDO:0007283","xrefs":{"Monarch":{"xref_id":"0007283"}}}


id: PBO:0041156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 11","termid":"PBO:0041156"}


id: PBO:0071589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 6","termid":"PBO:0071589"}


id: MONDO:0007181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial osteosclerosis","termid":"MONDO:0042973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axial osteomalacia","secondary_identifiers":["MESH:C537791","MEDGEN:354730","OMIM:109130","UMLS:C1862372","DOID:0080039"],"synonyms":[{"name":"atypical osteomalacia involving the axial skeleton","type":"related"},{"name":"axial osteomalacia","type":"exact"}],"termid":"MONDO:0007181","xrefs":{"Monarch":{"xref_id":"0007181"}}}


id: PBO:0083625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase and putative helicase; involved in synthesis-dependent strand annealing-mediated homologous recombination; ensures precise end-joining along with Srs2p in the Yku70p/Yku80p/Lig4p-dependent NHEJ pathway; controls 2-micron plasmid copy number by regulating the levels of the Flp1p recombinase; localizes to both the mitochondrion and the nucleus; contains a Snf2/Swi2 family ATPase/helicase and a RING finger domain; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0083625"}


id: PBO:0003685
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Up regulated During Septation","termid":"PBO:0003685"}


id: GO:0000408
data:
  {"annotated_genes":["SJAG_06560","SJAG_00378","SJAG_04201","SJAG_02863","SJAG_04182"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97481,98651,100320,103316,115452],"is_not":false,"summary":null,"term":"GO:0000408"}]},"cv_name":"cellular_component","definition":"A protein complex involved in t6A tRNA modification. For example, in Saccharomyces cerevisiae the complex contains Bud32p, Kae1p, Gon7p, Cgi121p, and Pcc1p.","definition_xrefs":["PMID:23945934","GOC:vw","GOC:elh","PMID:16874308","PMID:16564010","PMID:21183954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00378":null,"SJAG_02863":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"EKC/KEOPS complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"KEOPS/EKC complex","type":"exact"},{"name":"TCTC","type":"related"},{"name":"endopeptidase-like kinase chromatin-associated protein complex","type":"exact"},{"name":"kinase, putative endopeptidase and other proteins of small size protein complex","type":"exact"},{"name":"threonyl-carbamoly transferase complex","type":"related"}],"termid":"GO:0000408","terms_by_termid":{"GO:0000408":null}}


id: MONDO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary angle-closure glaucoma","termid":"MONDO:0001868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"interval angle-closure glaucoma","secondary_identifiers":["UMLS:C0154945","MEDGEN:509734","SCTID:65460003","ICD9:365.21","DOID:13549"],"synonyms":[{"name":"angle-closure glaucoma, subacute","type":"exact"},{"name":"intermittent angle-closure glaucoma","type":"exact"},{"name":"prodromal angle closure glaucoma","type":"exact"}],"termid":"MONDO:0001742","xrefs":{"Monarch":{"xref_id":"0001742"}}}


id: PBO:0088297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triglyceride lipase-cholesterol esterase","termid":"PBO:0088297"}


id: PBO:0087795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi2/Snf2-related ATPase; catalytic subunit of SWR1 complex, which exchanges histone variant H2A.Z (Htz1p) for chromatin-bound histone H2A; N-terminus can deliver H2A.Z-H2B dimer to DNA-(H3-H4)2 tetrasome; relocalizes to cytosol in response to hypoxia; chronological aging factor, mediates lifespan extension by dietary restriction","termid":"PBO:0087795"}


id: FYPO:0000873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000866"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000873"}


id: MONDO:0017443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital absence of both forearm and hand is a rare developmental defect during embryogenesis characterized by unilateral or bilateral arrest of proximal to distal development of the upper limb, leading to a transverse deficiency with absence of the forearm, wrist and hand. A short below-the-elbow amputation is most commonly observed and the residual limb is usually well cushioned, with rudimentary nubbins or dumpling possibly found on the end.","definition_xrefs":["Orphanet:294979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both forearm and hand","secondary_identifiers":["icd11.foundation:810894993","GARD:21194","ICD10CM:Q71.2","MEDGEN:727129","UMLS:C1306663"],"synonyms":[{"name":"radio-ulnar terminal transverse meromelia","type":"exact"}],"termid":"MONDO:0017443","xrefs":{"Monarch":{"xref_id":"0017443"}}}


id: PATO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark green","termid":"PATO:0001249"}


id: PBO:0048152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYN proto-oncogene, Src family tyrosine kinase","termid":"PBO:0048152"}


id: MONDO:0024357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central sleep apnea syndrome","termid":"MONDO:0004731"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug induced central sleep apnea","secondary_identifiers":["UMLS:C3662033","MEDGEN:783188","SCTID:104831000119109"],"synonyms":[{"name":"drug induced central sleep apnea","type":"exact"}],"termid":"MONDO:0024357","xrefs":{"Monarch":{"xref_id":"0024357"}}}


id: SO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structural region in an RNA molecule which promotes ribosomal frameshifting of cis coding sequence.","definition_xrefs":["RFAM:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_regulatory_frameshift_element","synonyms":[{"name":"cis regulatory frameshift element","type":"exact"}],"termid":"SO:0001427"}


id: PATO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's once or in or a few unpredictable instances.","definition_xrefs":["WordNet:WordNet","PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic","termid":"PATO:0000428"}


id: PBO:0031912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP endonuclease, minor transcript isoform Apn1","termid":"PBO:0031912"}


id: FYPO:0002106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, but the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"},{"relation_name":"is_a","term_name":"viable vegetative cell with increased cell diameter","termid":"FYPO:0006616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"viable stubby vegetative cell","synonyms":[{"name":"stubby viable cell during vegetative growth","type":"exact"},{"name":"stubby viable vegetative cell","type":"exact"},{"name":"viable stubby vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable watermelon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0002106"}


id: GO:0015043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferrileghemoglobin = NADP+ + 2 ferroleghemoglobin.","definition_xrefs":["EC:1.6.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"leghemoglobin reductase activity","secondary_identifiers":["MetaCyc:LEGHEMOGLOBIN-REDUCTASE-RXN"],"synonyms":[{"name":"NAD(P)H:ferrileghemoglobin oxidoreductase activity","type":"related"},{"name":"ferric leghemoglobin reductase activity","type":"related"}],"termid":"GO:0015043"}


id: GO:0120247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound biosynthetic process","synonyms":[{"name":"alkyne substituted compound anabolic process","type":"exact"},{"name":"alkyne substituted compound anabolism","type":"exact"},{"name":"alkyne substituted compound biosynthesis","type":"exact"},{"name":"alkyne substituted compound biosynthetic process","type":"exact"},{"name":"alkyne substituted compound synthesis","type":"exact"}],"termid":"GO:0120247"}


id: PBO:0087336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific assembly chaperone for ribosomal protein Rpl4a/Rpl4b; associates co-translationally with a evolutionarily conserved internal loop of nascent Rpl4a/b, and is released only after an the eukaryotic-specific extension of nascent Rpl4a/b mediates nuclear import, incorporation into the pre-ribosome and complex disassembly; role in biogenesis of the 60S ribosomal subunit; transcriptionally co-regulated with rRNA and ribosome biosynthesis genes","termid":"PBO:0087336"}


id: PR:Q9HFF4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC110.01","synonyms":[{"name":"Spom972h-ppk1","type":"exact"}],"termid":"PR:Q9HFF4"}


id: PBO:0059297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L46","termid":"PBO:0059297"}


id: PBO:0076465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAM41 mitochondrial translocator assembly and maintenance homolog","termid":"PBO:0076465"}


id: MONDO:0012178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability with optic atrophy, facial dysmorphism, microcephaly, and short stature","secondary_identifiers":["MEDGEN:324635","MESH:C563810","UMLS:C1836915","OMIM:609037"],"synonyms":[{"name":"intellectual disability with optic atrophy, facial dysmorphism, microcephaly, and short stature","type":"exact"},{"name":"mental retardation with optic atrophy, facial dysmorphism, microcephaly, and short stature","type":"related"}],"termid":"MONDO:0012178","xrefs":{"Monarch":{"xref_id":"0012178"}}}


id: PBO:0088511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human BRAP ortholog","termid":"PBO:0088511"}


id: GO:1990298
data:
  {"annotated_genes":["SJAG_02451","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93394,113621],"is_not":false,"summary":null,"term":"GO:1990298"}]},"cv_name":"cellular_component","definition":"Protein complex that associates with the kinetochores.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"bub1-bub3 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990298","terms_by_termid":{"GO:1990298":null}}


id: GO:1903883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GOC:krc","PMID:20054338","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"positively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"activation of IL-17-mediated signaling pathway","type":"narrow"},{"name":"activation of IL-17-mediated signalling pathway","type":"narrow"},{"name":"activation of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"positive regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"up regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"up regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"up-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"up-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"upregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"upregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903883"}


id: GO:0006622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the lysosome using signals contained within the protein.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"protein localization to lysosome","termid":"GO:0061462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein targeting to lysosome","synonyms":[{"name":"protein-lysosome targeting","type":"exact"}],"termid":"GO:0006622"}


id: PBO:0072425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 30","termid":"PBO:0072425"}


id: GO:0046215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"siderophore catabolic process","synonyms":[{"name":"siderochrome catabolism","type":"narrow"},{"name":"siderophore breakdown","type":"exact"},{"name":"siderophore catabolism","type":"exact"},{"name":"siderophore degradation","type":"exact"}],"termid":"GO:0046215"}


id: PATO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001049 absolute susceptibility (obsolete PATO:0001049)","termid":"PATO:0001049"}


id: PBO:0063254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 1","termid":"PBO:0063254"}


id: GO:0090416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nicotinate from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"nicotinate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-8869603"],"termid":"GO:0090416"}


id: PBO:0091014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc6","termid":"PBO:0091014"}


id: MONDO:0100003
data:
  {"annotated_genes":["SJAG_00969"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86501],"is_not":false,"summary":null,"term":"MONDO:0100003"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing renin-angiotensin-aldosterone system-blocker-induced angioedema.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00969":null},"genotype_count":0,"is_obsolete":false,"name":"susceptibility to angioedema induced by ACE inhibitors","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300909","MEDGEN:813041","UMLS:C3806711"],"synonyms":[{"name":"angioedema induced by ACE inhibitors, susceptibility to","type":"exact"}],"termid":"MONDO:0100003","terms_by_termid":{"MONDO:0100003":null},"xrefs":{"Monarch":{"xref_id":"0100003"}}}


id: PBO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavonol reductase/cinnamoyl-CoA reductase family","termid":"PBO:0001801"}


id: GO:0021502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the lateral borders of the neural plate begin to migrate upwards to form the neural folds, caused by the proliferation of the underlying mesoderm.","definition_xrefs":["PMID:15806586","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural fold formation","termid":"GO:0001842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold elevation formation","termid":"GO:0021502"}


id: PR:Q11120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ofd1 gene.","definition_xrefs":["UniProtKB:Q11120","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3,4-dihydroxylase ofd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.08c","synonyms":[{"name":"2-oxoglutarate and Fe(II) dioxygenase domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PKHD-type hydroxylase ofd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ofd1","type":"exact"}],"termid":"PR:Q11120"}


id: PBO:0057390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548d-1","termid":"PBO:0057390"}


id: MONDO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"staphyloma posticum","secondary_identifiers":["SCTID:87819007","DOID:13789","icd11.foundation:382453603","UMLS:C0155360","MEDGEN:509934","ICD9:379.12"],"termid":"MONDO:0001801","xrefs":{"Monarch":{"xref_id":"0001801"}}}


id: MONDO:0016194
data:
  {"annotated_genes":["SJAG_03025","SJAG_04887","SJAG_03379","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[84388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"},{"annotations":[85948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"},{"annotations":[85093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012538"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03025":null,"SJAG_03145":null,"SJAG_03379":null,"SJAG_04887":null},"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of nebulin","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680844","Orphanet:209182","GARD:20433","MEDGEN:1842429"],"termid":"MONDO:0016194","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0012239":null,"MONDO:0012538":null},"xrefs":{"Monarch":{"xref_id":"0016194"}}}


id: PBO:0059096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 2","termid":"PBO:0059096"}


id: MONDO:1011308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital nervous system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308","xrefs":{"Monarch":{"xref_id":"1011308"}}}


id: MONDO:0004472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast adenocarcinoma characterized by the presence of tall columnar neoplastic cells that contain intracytoplasmic mucin. Grossly, cystic changes are not identified.","definition_xrefs":["NCIT:C40355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast mucinous carcinoma","termid":"MONDO:0002707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast columnar cell mucinous carcinoma","secondary_identifiers":["MEDGEN:307307","UMLS:C1511305","DOID:8130"],"synonyms":[{"name":"breast columnar cell mucinous carcinoma","type":"exact"}],"termid":"MONDO:0004472","xrefs":{"Monarch":{"xref_id":"0004472"}}}


id: PBO:0064998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 5","termid":"PBO:0064998"}


id: PBO:0041869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsequestrin 1","termid":"PBO:0041869"}


id: PBO:0074778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3K","termid":"PBO:0074778"}


id: MONDO:0032865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, telomere-related, 5","secondary_identifiers":["OMIM:618674","MEDGEN:1684878","UMLS:C5231457"],"synonyms":[{"name":"PFBMFT5","type":"related"},{"name":"PULMONARY FIBROSIS AND/OR BONE MARROW FAILURE, TELOMERE-RELATED, 5","type":"related"},{"name":"ZCCHC8-related telomere biology disorder","type":"exact"}],"termid":"MONDO:0032865","xrefs":{"Monarch":{"xref_id":"0032865"}}}


id: PBO:0045472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRG1 pseudogene 1","termid":"PBO:0045472"}


id: GO:0034782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dimethylmalonate + H+ = isobutyrate + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylmalonate decarboxylase activity (obsolete GO:0034782)","termid":"GO:0034782"}


id: PBO:0072867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine N1-acetyltransferase 1","termid":"PBO:0072867"}


id: PBO:0084263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein with type-III transmembrane domains; required for maintenance of ER zinc homeostasis; required for post-translational SRP-independent protein translocation into the ER; necessary for efficient targeting of Trm1p tRNA methyltransferase to the inner nuclear membrane; mutations cause defects in cortical ER morphology in both the mother and daughter cells","termid":"PBO:0084263"}


id: PBO:0005103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C PHD Finger protein Spf1","termid":"PBO:0005103"}


id: PBO:0087423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit a of the F0 sector of mitochondrial F1F0 ATP synthase; mitochondrially encoded; translation is specifically activated by Atp22p; ATP6 and ATP8 mRNAs are not translated in the absence of the F1 sector of ATPase; mutations in human ortholog MT-ATP6 are associated with neurodegenerative disorders such as Neurogenic Ataxia and Retinitis Pigmentosa (NARP), Leigh syndrome (LS), Charcot-Marie-Tooth (CMT), and ataxia telangiectasia","termid":"PBO:0087423"}


id: GO:0097122
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin A2 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin A2-CDK1 complex","termid":"GO:0097122"}


id: PBO:0085722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the assembly of 60S ribosomal subunits; functionally interacts with Dbp6p; functions in a late nucleoplasmic step of the assembly","termid":"PBO:0085722"}


id: FYPO:0000055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"long microtubules","synonyms":[{"name":"elongated microtubules","type":"exact"},{"name":"long microtubules during mitotic cell cycle","type":"related"},{"name":"long microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defects, long microtubules","type":"exact"}],"termid":"FYPO:0000055"}


id: PBO:0114287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific cell surface glycoprotein","termid":"PBO:0114287"}


id: GO:0031268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pseudopodium, a temporary protrusion or retractile process of a cell, associated with cellular movement.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudopodium organization","synonyms":[{"name":"pseudopodium organisation","type":"exact"},{"name":"pseudopodium organization and biogenesis","type":"related"}],"termid":"GO:0031268"}


id: GO:0047315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-kynurenine + glyoxylate = 4-(2-aminophenyl)-2,4-dioxobutanoate + glycine.","definition_xrefs":["RHEA:19249","EC:2.6.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"kynurenine-glyoxylate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.63-RXN","KEGG_REACTION:R01957"],"synonyms":[{"name":"L-kynurenine:glyoxylate aminotransferase (cyclizing)","type":"related"},{"name":"kynurenine--glyoxylate aminotransferase activity","type":"related"},{"name":"kynurenine-glyoxylate aminotransferase activity","type":"exact"}],"termid":"GO:0047315"}


id: MONDO:0016749
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86536,86535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system neoplasm","termid":"MONDO:0021248"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"tumor of cranial and spinal nerves","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5679636","MEDGEN:1842705","Orphanet:252057","GARD:12697"],"synonyms":[{"name":"rare tumor of cranial and spinal nerves","type":"exact"},{"name":"rare tumour of cranial and spinal nerves","type":"exact"}],"termid":"MONDO:0016749","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0016749"}}}


id: PBO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 family protein","termid":"PBO:0002705"}


id: MOD:00073
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-methyl-L-methionine.","definition_xrefs":["DeltaMass:169","RESID:AA0064","PubMed:323502","PubMed:3298225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated methionine","termid":"MOD:01463"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-methionine","synonyms":[{"name":"(2S)-2-methylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-methylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"MOD_RES N-methylmethionine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methyl Methionyl","type":"exact"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-methionine","type":"exact"},{"name":"N-methylated L-methionine","type":"exact"},{"name":"N-methylmethionine","type":"exact"},{"name":"NMe1Met","type":"exact"}],"termid":"MOD:00073"}


id: PBO:0039258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1","termid":"PBO:0039258"}


id: MONDO:0009649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Moyamoya disease","termid":"MONDO:0016820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moyamoya disease 1","secondary_identifiers":["ICD9:437.5","MEDGEN:419790","SCTID:69116000","MESH:C536991","OMIM:252350","UMLS:C2931384"],"synonyms":[{"name":"MYMY1","type":"exact"},{"name":"Moyamoya disease","type":"related"},{"name":"Moyamoya disease 1","type":"related"},{"name":"spontaneous occlusion of the circle of Willis","type":"related"}],"termid":"MONDO:0009649","xrefs":{"Monarch":{"xref_id":"0009649"}}}


id: MONDO:0958322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, x-linked, syndromic 37","secondary_identifiers":["OMIM:301118"],"termid":"MONDO:0958322","xrefs":{"Monarch":{"xref_id":"0958322"}}}


id: GO:0003755
data:
  {"annotated_genes":["SJAG_04155","SJAG_02413","SJAG_02551","SJAG_02620","SJAG_00078","SJAG_01246","SJAG_00470","SJAG_01005","SJAG_01714","SJAG_01270","SJAG_02308","SJAG_04352","SJAG_03238","SJAG_03905","SJAG_00950","SJAG_03601","SJAG_00602"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57673,77175,89170,91181,91964,94515,97053,97645,102092,103661,103847,104553,106797,111560,112788,114433,116443],"is_not":false,"summary":null,"term":"GO:0003755"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).","definition_xrefs":["EC:5.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00470":null,"SJAG_00602":null,"SJAG_00950":null,"SJAG_01005":null,"SJAG_01246":null,"SJAG_01270":null,"SJAG_01714":null,"SJAG_02308":null,"SJAG_02413":null,"SJAG_02551":null,"SJAG_02620":null,"SJAG_03238":null,"SJAG_03601":null,"SJAG_03905":null,"SJAG_04155":null,"SJAG_04352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016853"],"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2022073","GO:0042028","GO:0004752","MetaCyc:PEPTIDYLPROLYL-ISOMERASE-RXN","Reactome:R-HSA-9626816","RHEA:16237"],"synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"narrow"},{"name":"PPIase activity","type":"related"},{"name":"cis-trans proline isomerase activity","type":"exact"},{"name":"cyclophilin activity","type":"related"},{"name":"cyclophilin-type peptidyl-prolyl cis-trans isomerase activity","type":"narrow"},{"name":"immunophilin","type":"related"},{"name":"juglone-sensitive cis-trans proline isomerase activity","type":"narrow"},{"name":"juglone-sensitive peptidyl-prolyl cis-trans isomerase activity","type":"narrow"},{"name":"parvulin","type":"related"},{"name":"peptide bond isomerase activity","type":"related"},{"name":"peptidyl-prolyl isomerase B reaction","type":"related"},{"name":"peptidylproline cis-trans-isomerase activity","type":"related"},{"name":"peptidylprolyl cis-trans isomerase activity","type":"related"},{"name":"peptidylprolyl isomerase activity","type":"related"},{"name":"rotamase activity","type":"related"}],"termid":"GO:0003755","terms_by_termid":{"GO:0003755":null}}


id: GO:2000417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"negatively_regulates","term_name":"eosinophil migration","termid":"GO:0072677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil migration","termid":"GO:2000417"}


id: PBO:0067759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 59","termid":"PBO:0067759"}


id: GO:0002605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"negatively_regulates","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell antigen processing and presentation","synonyms":[{"name":"down regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"down-regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"downregulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"inhibition of dendritic cell antigen processing and presentation","type":"narrow"}],"termid":"GO:0002605"}


id: PBO:0030271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_slow_rereplication","termid":"PBO:0030271"}


id: MOD:00529
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex3HexNAc2P1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(3)HexNAc(2)P(1)","type":"related"},{"name":"Hex3HexNAc2P1","type":"related"}],"termid":"MOD:00529"}


id: MOD:00867
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-cysteine converted to an L-selenocysteine residue to form L-cysteinyl-L-selenocystine.","definition_xrefs":["PubMed:12911312","RESID:AA0358#CYS","PubMed:17177418","PubMed:10801974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium substitution for sulfur","termid":"MOD:00007"},{"relation_name":"is_a","term_name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine (Cys-Cys)","synonyms":[{"name":"(R,R)-2-amino-3-[3-(2-aminopropanoic acid)sulfanyl]selanylpropanoic acid","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Cys-Sec)","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Sec-Cys)","type":"exact"},{"name":"L-cysteinyl-L-selenocysteine","type":"exact"}],"termid":"MOD:00867"}


id: FYECO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using camptothecin (CPT) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPT block and release","termid":"FYECO:0000386"}


id: PBO:0030280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0030280"}


id: MONDO:0014715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary immunodeficiency with post-measles-mumps-rubella vaccine viral infection is a rare primary immunodeficiency due to a defect in innate immunity disorder characterized by selective susceptibility to viral infections, particularly after systemic challenge with live viral vaccines, such as the measles, mumps and rubella (MMR) vaccine. Patients present severe, potentially fatal, manifestations to viral illness, including encephalitis, hepatitis and pneumonitis.","definition_xrefs":["Orphanet:431166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary immunodeficiency with post-measles-mumps-rubella vaccine viral infection","secondary_identifiers":["MEDGEN:904009","NANDO:2200770","OMIM:616636","DOID:0111975","UMLS:C4225260","GARD:17711"],"synonyms":[{"name":"IMD44","type":"exact"},{"name":"immunodeficiency 44","type":"exact"},{"name":"immunodeficiency type 44","type":"exact"},{"name":"primary immunodeficiency with post-MMR vaccine viral infection","type":"exact"}],"termid":"MONDO:0014715","xrefs":{"Monarch":{"xref_id":"0014715"}}}


id: PBO:0078032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 22","termid":"PBO:0078032"}


id: MONDO:0020261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurological disease with abnormal eye movements (obsolete MONDO:0020261)","secondary_identifiers":["Orphanet:98691"],"synonyms":[{"name":"abnormal eye movements","type":"exact"}],"termid":"MONDO:0020261","xrefs":{"Monarch":{"xref_id":"0020261"}}}


id: PBO:0046315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"energy homeostasis associated","termid":"PBO:0046315"}


id: GO:0016842
data:
  {"annotated_genes":["SJAG_05287","SJAG_00903","SJAG_02850","SJAG_01461"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070626"},{"annotations":[102627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004056"},{"annotations":[107871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061928"},{"annotations":[102600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004018"},{"annotations":[90977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050385"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of amides or amidines by the cleavage of a carbon-nitrogen bond or the reverse reaction with an amide or amidine as a substrate.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_01461":null,"SJAG_02850":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"amidine-lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.3.2.-"],"termid":"GO:0016842","terms_by_termid":{"GO:0004018":null,"GO:0004056":null,"GO:0050385":null,"GO:0061928":null,"GO:0070626":null}}


id: MONDO:0000173
data:
  {"annotated_genes":["SJAG_03188","SJAG_04053","SJAG_04316","SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[85892,85891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[85173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, type C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:609308"],"termid":"MONDO:0000173","terms_by_termid":{"MONDO:0012248":null,"MONDO:0013162":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0000173"}}}


id: GO:1905626
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92529],"is_not":false,"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-methionine import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17556368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-methionine import across plasma membrane","termid":"GO:1905624"},{"relation_name":"positively_regulates","term_name":"L-methionine import across plasma membrane","termid":"GO:1905544"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-methionine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905626","terms_by_termid":{"GO:1905626":null}}


id: MOD:00707
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively converts an L-tyrosine residue to a multihydroxylated L-phenylalanine","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated tyrosine","synonyms":[{"name":"HyTyr","type":"exact"}],"termid":"MOD:00707"}


id: GO:0031936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing (obsolete GO:0031936)","synonyms":[{"name":"down regulation of chromatin silencing","type":"exact"},{"name":"down-regulation of chromatin silencing","type":"exact"},{"name":"downregulation of chromatin silencing","type":"exact"},{"name":"inhibition of chromatin silencing","type":"narrow"},{"name":"loss of chromatin silencing","type":"exact"},{"name":"negative regulation of heterochromatic silencing","type":"exact"}],"termid":"GO:0031936"}


id: PBO:0064955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 7","termid":"PBO:0064955"}


id: GO:0070544
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from lysine at position 36 of the histone.","definition_xrefs":["GOC:sart","PMID:19061644"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 demethylation (obsolete GO:0070544)","synonyms":[{"name":"H3K36 demethylation","type":"related"}],"termid":"GO:0070544"}


id: GO:0060203
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-sculpted glutamate transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"clathrin-sculpted glutamate transport vesicle","termid":"GO:0060199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted glutamate transport vesicle membrane","synonyms":[{"name":"clathrin sculpted glutamate constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"clathrin sculpted glutamate transport vesicle membrane","type":"exact"}],"termid":"GO:0060203"}


id: MONDO:0004499
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung carcinoma arising from the hilum of the lung.","definition_xrefs":["NCIT:C7454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung hilum cancer","termid":"MONDO:0004332"},{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung hilum carcinoma","secondary_identifiers":["MEDGEN:235266","UMLS:C1334445","DOID:8207"],"synonyms":[{"name":"carcinoma of lung hilus","type":"exact"},{"name":"hilar lung carcinoma","type":"exact"},{"name":"lung hilum cancer","type":"broad"},{"name":"lung hilum carcinoma","type":"exact"},{"name":"lung hilus carcinoma","type":"exact"}],"termid":"MONDO:0004499","xrefs":{"Monarch":{"xref_id":"0004499"}}}


id: PBO:0046432
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxide hydrolase 2","termid":"PBO:0046432"}


id: GO:0047580
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hydroxy-L-proline = cis-4-hydroxy-D-proline.","definition_xrefs":["EC:5.1.1.8","RHEA:21152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"4-hydroxyproline epimerase activity","secondary_identifiers":["KEGG_REACTION:R03296","MetaCyc:4-HYDROXYPROLINE-EPIMERASE-RXN"],"synonyms":[{"name":"4-hydroxyproline 2-epimerase activity","type":"related"},{"name":"L-hydroxyproline epimerase activity","type":"related"},{"name":"hydroxyproline 2-epimerase activity","type":"related"},{"name":"hydroxyproline epimerase activity","type":"related"}],"termid":"GO:0047580"}


id: PBO:0000465
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptide chain release factor (predicted)","termid":"PBO:0000465"}


id: PBO:0004750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase (predicted)","termid":"PBO:0004750"}


id: SO:0001727
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_monomethylation_site","synonyms":[{"name":"H3K9 mono-methylation site","type":"exact"},{"name":"H3K9Me1","type":"related"}],"termid":"SO:0001727"}


id: PBO:0070213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 143 pseudogene","termid":"PBO:0070213"}


id: PBO:0058904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12122","termid":"PBO:0058904"}


id: PBO:0057976
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3691","termid":"PBO:0057976"}


id: MONDO:0020589
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises within the myocardium or cardiac chambers. The reported cases have been teratomas and yolk sac tumors.","definition_xrefs":["NCIT:C147005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"},{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac germ cell tumor","secondary_identifiers":["MEDGEN:1633290","UMLS:C4687640"],"synonyms":[{"name":"cardiac germ cell tumor","type":"exact"},{"name":"heart germ cell tumor","type":"exact"},{"name":"heart germ cell tumour","type":"exact"}],"termid":"MONDO:0020589","xrefs":{"Monarch":{"xref_id":"0020589"}}}


id: PR:Q9Y7Z2
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-ribosylation factor 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04106","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.08","secondary_identifiers":["UniProtKB:Q9Y7Z2"],"synonyms":[{"name":"Spom972h-ARF6","type":"exact"}],"termid":"PR:Q9Y7Z2"}


id: PBO:0027604
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0027604"}


id: PBO:0057282
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 503","termid":"PBO:0057282"}


id: PATO:0001297
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation reflective quality inhering in a bearer by virtue of the ratio of the energy of a wave reflected from its surface to the energy possessed by the wave striking the bearer's surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reflectivity","termid":"PATO:0001297"}


id: PBO:0047114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 162 member A","termid":"PBO:0047114"}


id: PBO:0053616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 656","termid":"PBO:0053616"}


id: FYPO:0006083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain four spores form following conjugation and subsequent sporulation, but sporulation is not entirely normal.","definition_xrefs":["PMID:28011631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000121"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with four spores","synonyms":[{"name":"ascospore formation resulting in formation of asci with four spores","type":"exact"},{"name":"normal spore number","type":"exact"},{"name":"sporulation resulting in formation of asci with four spores","type":"exact"}],"termid":"FYPO:0006083"}


id: PBO:0072770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein Z","termid":"PBO:0072770"}


id: GO:0019219
data:
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